Chy3G052940 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G052940
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Location	chrH03: 3558026 .. 3558175 (+)
RNA-Seq Expression	Chy3G052940
Synteny	Chy3G052940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGTCCCCTCACTCTGATCATTGCCTTCTCACTGTTCTTCTCCAGAACCAAATTGATGGACTTCAAATCATGCATGATCATAAGTGGGTCAATGTTAATCCCATTCCCAACTCTTTCTTCGTTAACACTGCTGATGAACTTGAG

mRNA sequence

ATGGGTTTGTCCCCTCACTCTGATCATTGCCTTCTCACTGTTCTTCTCCAGAACCAAATTGATGGACTTCAAATCATGCATGATCATAAGTGGGTCAATGTTAATCCCATTCCCAACTCTTTCTTCGTTAACACTGCTGATGAACTTGAG

Coding sequence (CDS)

ATGGGTTTGTCCCCTCACTCTGATCATTGCCTTCTCACTGTTCTTCTCCAGAACCAAATTGATGGACTTCAAATCATGCATGATCATAAGTGGGTCAATGTTAATCCCATTCCCAACTCTTTCTTCGTTAACACTGCTGATGAACTTGAG

Protein sequence

MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE

Homology

[Close]

BLAST of Chy3G052940 vs. ExPASy Swiss-Prot
Match: Q6Z244 (2-oxoglutarate-dependent dioxygenase 19 OS=Oryza sativa subsp. japonica OX=39947 GN=2ODD19 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 8.1e-12
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           MGLS HSDH LLT+L QN +DGLQ+ HD +W+   P+P SFFV   D+LE
Sbjct: 203 MGLSAHSDHGLLTLLFQNGVDGLQVKHDGEWLLAKPLPGSFFVIAGDQLE 252

[Close]

BLAST of Chy3G052940 vs. ExPASy Swiss-Prot
Match: Q6YYX9 (Probable 2-oxoglutarate-dependent dioxygenase SLC1 OS=Oryza sativa subsp. japonica OX=39947 GN=SLC1 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.4e-10
Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           +G+ PHSD+  LT++LQ+++ GLQ+MH  +W+ V+P+P SF VN  D LE
Sbjct: 253 LGMPPHSDYGFLTLVLQDEVAGLQVMHAGEWLTVDPLPGSFVVNVGDHLE 302

[Close]

BLAST of Chy3G052940 vs. ExPASy Swiss-Prot
Match: Q9ZSA8 (Protein DMR6-LIKE OXYGENASE 1 OS=Arabidopsis thaliana OX=3702 GN=DLO1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 7.6e-10
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 2   GLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           GL  H D  ++TVLLQ+Q+ GLQ+  D KWV V+PIPN+F VN  D+++
Sbjct: 217 GLPGHKDPTVITVLLQDQVSGLQVFKDDKWVAVSPIPNTFIVNIGDQMQ 265

[Close]

BLAST of Chy3G052940 vs. ExPASy Swiss-Prot
Match: Q9ZSA7 (Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana OX=3702 GN=DLO2 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 7.6e-10
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 2   GLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           GL  H D  L+TVLLQ+++ GLQ+  D KW+ VNP+PN+F VN  D+++
Sbjct: 215 GLPGHKDANLITVLLQDEVSGLQVFKDGKWIAVNPVPNTFIVNLGDQMQ 263

[Close]

BLAST of Chy3G052940 vs. ExPASy Swiss-Prot
Match: Q39224 (Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 9.9e-10
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQ-NQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           +GL+PHSD   LTVL+Q N ++GLQI  D KWV V P+PN+F VN  D LE
Sbjct: 228 IGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLE 278

[Close]

BLAST of Chy3G052940 vs. ExPASy TrEMBL
Match: A0A6J1D661 (protein DMR6-LIKE OXYGENASE 1-like OS=Momordica charantia OX=3673 GN=LOC111017638 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-15
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           MGL PHSDHCLLT +LQN+I GLQI+H  KWVNVNPIPNSF VNTAD+LE
Sbjct: 242 MGLPPHSDHCLLTFILQNKICGLQILHQGKWVNVNPIPNSFLVNTADQLE 291

[Close]

BLAST of Chy3G052940 vs. ExPASy TrEMBL
Match: A0A6J1JCE3 (protein DMR6-LIKE OXYGENASE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483195 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.0e-14
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 2   GLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           GL PHSD CLLTVLLQN + GLQI+HDH+W+ VNP+PN+  VNTAD+LE
Sbjct: 253 GLPPHSDQCLLTVLLQNHVSGLQILHDHQWLTVNPVPNALLVNTADQLE 301

[Close]

BLAST of Chy3G052940 vs. ExPASy TrEMBL
Match: A0A6J1CGT6 (flavonol synthase/flavanone 3-hydroxylase-like OS=Momordica charantia OX=3673 GN=LOC111011535 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-13
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           MGL  HSDHCLLT+LL NQI GLQI+H   WVNVNPIPNSF V+ AD+LE
Sbjct: 59  MGLPSHSDHCLLTLLLHNQISGLQILHQGNWVNVNPIPNSFLVHVADQLE 108

[Close]

BLAST of Chy3G052940 vs. ExPASy TrEMBL
Match: A0A6A2WXT5 (Putative ENTH/ANTH/VHS superfamily protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112491pilonHSYRG00275 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.8e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           MGL PHSDH LLT+L+QN IDGLQ+MH   WV++NP+PNSF VNT D +E
Sbjct: 211 MGLPPHSDHGLLTILMQNGIDGLQVMHKGNWVSINPLPNSFLVNTGDHME 260

[Close]

BLAST of Chy3G052940 vs. ExPASy TrEMBL
Match: A0A2G5E8B3 (Fe2OG dioxygenase domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01000101v1 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.6e-13
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           MGL PHSDH LLT+L+QNQI GLQ+ H+ KWVNV+P+PN++ VNTAD LE
Sbjct: 229 MGLPPHSDHGLLTLLIQNQIGGLQVNHNGKWVNVHPLPNTYLVNTADHLE 278

[Close]

BLAST of Chy3G052940 vs. NCBI nr
Match: XP_038886412.1 (protein DMR6-LIKE OXYGENASE 2-like [Benincasa hispida])

HSP 1 Score: 107 bits (266), Expect = 4.14e-26
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 50
           MGLSPHSDHCLLTVLLQNQIDGLQI+HDHKWVNVNPIPNSF VNTAD+LE
Sbjct: 219 MGLSPHSDHCLLTVLLQNQIDGLQILHDHKWVNVNPIPNSFLVNTADQLE 268

[Close]

BLAST of Chy3G052940 vs. NCBI nr
Match: XP_022149149.1 (protein DMR6-LIKE OXYGENASE 1-like [Momordica charantia])

HSP 1 Score: 91.3 bits (225), Expect = 4.55e-20
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 50
           MGL PHSDHCLLT +LQN+I GLQI+H  KWVNVNPIPNSF VNTAD+LE
Sbjct: 242 MGLPPHSDHCLLTFILQNKICGLQILHQGKWVNVNPIPNSFLVNTADQLE 291

[Close]

BLAST of Chy3G052940 vs. NCBI nr
Match: KAG7014868.1 (Protein DMR6-LIKE OXYGENASE 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 85.9 bits (211), Expect = 1.43e-19
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 2  GLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 50
          GL PHSD CLLTVLLQN + GLQI+HDH+W+ VNP+PN+  VNTAD+LE
Sbjct: 42 GLPPHSDQCLLTVLLQNHVAGLQILHDHQWLTVNPVPNALLVNTADQLE 90

[Close]

BLAST of Chy3G052940 vs. NCBI nr
Match: XP_022141030.1 (flavonol synthase/flavanone 3-hydroxylase-like [Momordica charantia])

HSP 1 Score: 84.7 bits (208), Expect = 1.06e-18
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 50
           MGL  HSDHCLLT+LL NQI GLQI+H   WVNVNPIPNSF V+ AD+LE
Sbjct: 59  MGLPSHSDHCLLTLLLHNQISGLQILHQGNWVNVNPIPNSFLVHVADQLE 108

[Close]

BLAST of Chy3G052940 vs. NCBI nr
Match: XP_022985114.1 (protein DMR6-LIKE OXYGENASE 2-like [Cucurbita maxima])

HSP 1 Score: 86.7 bits (213), Expect = 2.46e-18
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 2   GLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 50
           GL PHSD CLLTVLLQN + GLQI+HDH+W+ VNP+PN+  VNTAD+LE
Sbjct: 253 GLPPHSDQCLLTVLLQNHVSGLQILHDHQWLTVNPVPNALLVNTADQLE 301

[Close]

BLAST of Chy3G052940 vs. TAIR 10
Match: AT2G36690.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 6.4e-12
Identity = 27/50 (54.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           +G+ PHSD+  LT+LLQ++++GLQI++  +WV V+PIP SF VN  D LE
Sbjct: 234 LGMPPHSDYGFLTLLLQDEVEGLQILYRDEWVTVDPIPGSFVVNVGDHLE 283

[Close]

BLAST of Chy3G052940 vs. TAIR 10
Match: AT4G10500.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-11
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 2   GLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           GL  H D  ++TVLLQ+Q+ GLQ+  D KWV V+PIPN+F VN  D+++
Sbjct: 217 GLPGHKDPTVITVLLQDQVSGLQVFKDDKWVAVSPIPNTFIVNIGDQMQ 265

[Close]

BLAST of Chy3G052940 vs. TAIR 10
Match: AT4G10490.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-11
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 2   GLSPHSDHCLLTVLLQNQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           GL  H D  L+TVLLQ+++ GLQ+  D KW+ VNP+PN+F VN  D+++
Sbjct: 215 GLPGHKDANLITVLLQDEVSGLQVFKDGKWIAVNPVPNTFIVNLGDQMQ 263

[Close]

BLAST of Chy3G052940 vs. TAIR 10
Match: AT1G17020.1 (senescence-related gene 1 )

HSP 1 Score: 63.2 bits (152), Expect = 7.0e-11
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQ-NQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           +GL+PHSD   LTVL+Q N ++GLQI  D KWV V P+PN+F VN  D LE
Sbjct: 228 IGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLE 278

[Close]

BLAST of Chy3G052940 vs. TAIR 10
Match: AT4G25310.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-10
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 1   MGLSPHSDHCLLTVLLQ-NQIDGLQIMHDHKWVNVNPIPNSFFVNTADELE 51
           +GL+PHSD   LT+LLQ N+++GLQI  D KWV+V P+PN+  VN  D LE
Sbjct: 223 IGLTPHSDATGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILE 273

The following BLAST results are available for this feature:

BLAST of Chy3G052940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6Z244	8.1e-12	60.00	2-oxoglutarate-dependent dioxygenase 19 OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q6YYX9	3.4e-10	50.00	Probable 2-oxoglutarate-dependent dioxygenase SLC1 OS=Oryza sativa subsp. japoni...	[more]
Q9ZSA8	7.6e-10	53.06	Protein DMR6-LIKE OXYGENASE 1 OS=Arabidopsis thaliana OX=3702 GN=DLO1 PE=1 SV=1	[more]
Q9ZSA7	7.6e-10	51.02	Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana OX=3702 GN=DLO2 PE=2 SV=1	[more]
Q39224	9.9e-10	58.82	Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1	[more]

BLAST of Chy3G052940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D661	1.6e-15	80.00	protein DMR6-LIKE OXYGENASE 1-like OS=Momordica charantia OX=3673 GN=LOC11101763...	[more]
A0A6J1JCE3	4.0e-14	71.43	protein DMR6-LIKE OXYGENASE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483195 P...	[more]
A0A6J1CGT6	1.5e-13	74.00	flavonol synthase/flavanone 3-hydroxylase-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6A2WXT5	5.8e-13	68.00	Putative ENTH/ANTH/VHS superfamily protein OS=Hibiscus syriacus OX=106335 GN=F3Y...	[more]
A0A2G5E8B3	7.6e-13	70.00	Fe2OG dioxygenase domain-containing protein OS=Aquilegia coerulea OX=218851 GN=A...	[more]

BLAST of Chy3G052940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886412.1	4.14e-26	94.00	protein DMR6-LIKE OXYGENASE 2-like [Benincasa hispida]	[more]
XP_022149149.1	4.55e-20	80.00	protein DMR6-LIKE OXYGENASE 1-like [Momordica charantia]	[more]
KAG7014868.1	1.43e-19	71.43	Protein DMR6-LIKE OXYGENASE 2, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_022141030.1	1.06e-18	74.00	flavonol synthase/flavanone 3-hydroxylase-like [Momordica charantia]	[more]
XP_022985114.1	2.46e-18	71.43	protein DMR6-LIKE OXYGENASE 2-like [Cucurbita maxima]	[more]

BLAST of Chy3G052940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36690.1	6.4e-12	54.00	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT4G10500.1	5.4e-11	53.06	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT4G10490.1	5.4e-11	51.02	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT1G17020.1	7.0e-11	58.82	senescence-related gene 1	[more]
AT4G25310.1	1.2e-10	56.86	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044861	Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain	PFAM	PF03171	2OG-FeII_Oxy	coord: 1..49 e-value: 1.3E-9 score: 38.4
IPR027443	Isopenicillin N synthase-like superfamily	GENE3D	2.60.120.330		coord: 1..50 e-value: 1.1E-16 score: 63.0
None	No IPR available	PANTHER	PTHR10209	OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN	coord: 2..49
None	No IPR available	PANTHER	PTHR10209:SF618	OS08G0480200 PROTEIN	coord: 2..49
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G052940.1	Chy3G052940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0002238	response to molecule of fungal origin
molecular_function	GO:0016706	2-oxoglutarate-dependent dioxygenase activity
molecular_function	GO:0046872	metal ion binding