Chy3G052590 (gene) Cucumber (hystrix) v1

Overview
NameChy3G052590
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionULP_PROTEASE domain-containing protein
LocationchrH03: 2968184 .. 2968353 (-)
RNA-Seq ExpressionChy3G052590
SyntenyChy3G052590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GACAATCTACTTGCTTCACGGAATGTGACTCATTCATTGGATGACTCCACTTTGGACATACTATCAGAAGCTATTGAAGGGAATGATCCACCAAGGAGGATTCAGTGGGTGGATAGATATGTCACGATCAACGACGAAATACTTTCATACTTGTATAGAAAAATGAAAGA

mRNA sequence

GACAATCTACTTGCTTCACGGAATGTGACTCATTCATTGGATGACTCCACTTTGGACATACTATCAGAAGCTATTGAAGGGAATGATCCACCAAGGAGGATTCAGTGGGTGGATAGATATGTCACGATCAACGACGAAATACTTTCATACTTGTATAGAAAAATGAAAGA

Coding sequence (CDS)

GACAATCTACTTGCTTCACGGAATGTGACTCATTCATTGGATGACTCCACTTTGGACATACTATCAGAAGCTATTGAAGGGAATGATCCACCAAGGAGGATTCAGTGGGTGGATAGATATGTCACGATCAACGACGAAATACTTTCATACTTGTATAGAAAAATGAAAGA

Protein sequence

DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVTINDEILSYLYRKMKX
Homology
[Close]
BLAST of Chy3G052590 vs. ExPASy TrEMBL
Match: A0A5A7VE34 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001320 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1  DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVTINDE 47
          DNLL S+  THS+D+ T DILS+AI GNDPP RI+ VD+YVT+  E
Sbjct: 41 DNLLVSKRATHSMDNVTCDILSQAIGGNDPPGRIRGVDQYVTLKLE 86

[Close]
BLAST of Chy3G052590 vs. ExPASy TrEMBL
Match: A0A5A7TN55 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00860 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.0e-06
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 1   DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVT 43
           DNLL S++ +HS+D+ T DILS+AIEGNDPP RI+ V +YVT
Sbjct: 243 DNLLVSKHASHSMDNVTCDILSQAIEGNDPPGRIRGVGQYVT 284

[Close]
BLAST of Chy3G052590 vs. ExPASy TrEMBL
Match: A0A5D3BPG6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001010 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.9e-06
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 1   DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVT 43
           DNLL S+  +HS+D+ T DILS+AI GNDPPRRI+ V +YVT
Sbjct: 206 DNLLVSKRASHSMDNVTCDILSQAIGGNDPPRRIRGVGQYVT 247

[Close]
BLAST of Chy3G052590 vs. ExPASy TrEMBL
Match: A0A5A7VM08 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004140 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.9e-06
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 1   DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVT 43
           DNLL S+  +HS+D+ T DILS+AI GNDPPRRI+ V +YVT
Sbjct: 206 DNLLVSKRASHSMDNVTCDILSQAIGGNDPPRRIRGVGQYVT 247

[Close]
BLAST of Chy3G052590 vs. ExPASy TrEMBL
Match: A0A5A7V997 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00030 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-05
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0 

Query: 1   DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVT 43
           DNLL S+ VTH +D+ T DILS+ I GNDPPRRI+ V +YVT
Sbjct: 158 DNLLVSKRVTHLMDNVTCDILSQPIRGNDPPRRIRGVGQYVT 199

[Close]
BLAST of Chy3G052590 vs. NCBI nr
Match: KAA0065450.1 (uncharacterized protein E6C27_scaffold17G001320 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 9.16e-09
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1  DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVTINDE 46
          DNLL S+  THS+D+ T DILS+AI GNDPP RI+ VD+YVT+  E
Sbjct: 41 DNLLVSKRATHSMDNVTCDILSQAIGGNDPPGRIRGVDQYVTLKLE 86

[Close]
BLAST of Chy3G052590 vs. NCBI nr
Match: KAA0043011.1 (uncharacterized protein E6C27_scaffold75G00860 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 7.32e-08
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 1   DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVT 42
           DNLL S++ +HS+D+ T DILS+AIEGNDPP RI+ V +YVT
Sbjct: 243 DNLLVSKHASHSMDNVTCDILSQAIEGNDPPGRIRGVGQYVT 284

[Close]
BLAST of Chy3G052590 vs. NCBI nr
Match: TYK00930.1 (uncharacterized protein E5676_scaffold602G001010 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 1.09e-07
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 1   DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVT 42
           DNLL S+  +HS+D+ T DILS+AI GNDPPRRI+ V +YVT
Sbjct: 206 DNLLVSKRASHSMDNVTCDILSQAIGGNDPPRRIRGVGQYVT 247

[Close]
BLAST of Chy3G052590 vs. NCBI nr
Match: KAA0066349.1 (uncharacterized protein E6C27_scaffold21G004140 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 1.09e-07
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 1   DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVT 42
           DNLL S+  +HS+D+ T DILS+AI GNDPPRRI+ V +YVT
Sbjct: 206 DNLLVSKRASHSMDNVTCDILSQAIGGNDPPRRIRGVGQYVT 247

[Close]
BLAST of Chy3G052590 vs. NCBI nr
Match: KAA0062271.1 (uncharacterized protein E6C27_scaffold154G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 1.48e-07
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0 

Query: 1   DNLLASRNVTHSLDDSTLDILSEAIEGNDPPRRIQWVDRYVT 42
           DNLL S+ VTH +D+ T DILS+ I GNDPPRRI+ V +YVT
Sbjct: 158 DNLLVSKRVTHLMDNVTCDILSQPIRGNDPPRRIRGVGQYVT 199

The following BLAST results are available for this feature:
BLAST of Chy3G052590 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G052590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VE341.2e-0663.04Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TN556.0e-0664.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BPG67.9e-0664.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VM087.9e-0664.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V9971.0e-0564.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of Chy3G052590 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0065450.19.16e-0963.04uncharacterized protein E6C27_scaffold17G001320 [Cucumis melo var. makuwa][more]
KAA0043011.17.32e-0864.29uncharacterized protein E6C27_scaffold75G00860 [Cucumis melo var. makuwa][more]
TYK00930.11.09e-0764.29uncharacterized protein E5676_scaffold602G001010 [Cucumis melo var. makuwa][more]
KAA0066349.11.09e-0764.29uncharacterized protein E6C27_scaffold21G004140 [Cucumis melo var. makuwa][more]
KAA0062271.11.48e-0764.29uncharacterized protein E6C27_scaffold154G00030 [Cucumis melo var. makuwa][more]
BLAST of Chy3G052590 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G052590.1Chy3G052590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity