Chy3G052540 (gene) Cucumber (hystrix) v1

Overview
NameChy3G052540
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH03: 2829583 .. 2829983 (+)
RNA-Seq ExpressionChy3G052540
SyntenyChy3G052540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAACGCGGATCACATGTTTTTGATTTCGCCGATTTCGCAATTTCACGTTCATAAGGTGGTTTTTGAACCGAACTCTTTGTTTCGGTTCATGTCCGGTTCAGTCGGTCTTTCTGTAATACTTTTGATTTTTTTTTAAAGAAAAAGAAACCCTTCGCGGTTGAAGTTTGGAAGTCCGGATTGTCAGATGGTTGAGCCGTGGAGGTCTTCTGATCTGAGTAGTTGTTGGTCTAAAAAGGGGAATGGAGATGGCGGCTTGTGGGTGTGATGTGTGAAGGAGGCGTGGAGGTTCAAAGATGAGAGGAGAATGGATATGGCAACGGCCGGCGAATTGCAAAAGAGAAGCCGGTGGTGAAAACTGAAGTCCCAAAGCTTTCAAGTGCGGGATATGGCCGCTGA

mRNA sequence

ATGAACAACGCGGATCACATGTTTTTGATTTCGCCGATTTCGCAATTTCACGTTCATAAGGTGGTTTTTGAACCGAACTCTTTGTTTCGGTTCATGTCCGGTTCAGTCGGTCTTTCTGAGGCGTGGAGGTTCAAAGATGAGAGGAGAATGGATATGGCAACGGCCGGCGAATTGCAAAAGAGAAGCCGGTGGTGAAAACTGAAGTCCCAAAGCTTTCAAGTGCGGGATATGGCCGCTGA

Coding sequence (CDS)

ATGAACAACGCGGATCACATGTTTTTGATTTCGCCGATTTCGCAATTTCACGTTCATAAGGTGGTTTTTGAACCGAACTCTTTGTTTCGGTTCATGTCCGGTTCAGTCGGTCTTTCTGAGGCGTGGAGGTTCAAAGATGAGAGGAGAATGGATATGGCAACGGCCGGCGAATTGCAAAAGAGAAGCCGGTGGTGAAAACTGAAGTCCCAAAGCTTTCAAGTGCGGGATATGGCCGCTGA

Protein sequence

MNNADHMFLISPISQFHVHKVVFEPNSLFRFMSGSVGLSEAWRFKDERRMDMATAGELQKRSRW*KLKSQSFQVRDMAAX
Homology
[Close]
BLAST of Chy3G052540 vs. ExPASy TrEMBL
Match: A0A0A0KDN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017070 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21
Identity = 54/60 (90.00%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 1  MNNADHMFLISPISQFHVHKVVFEPNSLFRFMSGSVGLSEAWRFKDERRMDMATAGELQK 60
          MNNADHMFLIS ISQFHVH VV EPNSLFRFM GSVGLSEAW+FKDERRMD+ATAGELQK
Sbjct: 1  MNNADHMFLISRISQFHVHMVVSEPNSLFRFMPGSVGLSEAWKFKDERRMDIATAGELQK 60

[Close]
BLAST of Chy3G052540 vs. NCBI nr
Match: KGN45891.1 (hypothetical protein Csa_004837 [Cucumis sativus])

HSP 1 Score: 109 bits (273), Expect = 2.36e-29
Identity = 54/60 (90.00%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 1  MNNADHMFLISPISQFHVHKVVFEPNSLFRFMSGSVGLSEAWRFKDERRMDMATAGELQK 60
          MNNADHMFLIS ISQFHVH VV EPNSLFRFM GSVGLSEAW+FKDERRMD+ATAGELQK
Sbjct: 1  MNNADHMFLISRISQFHVHMVVSEPNSLFRFMPGSVGLSEAWKFKDERRMDIATAGELQK 60

The following BLAST results are available for this feature:
BLAST of Chy3G052540 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G052540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDN31.1e-2190.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017070 PE=4 SV=1[more]
BLAST of Chy3G052540 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45891.12.36e-2990.00hypothetical protein Csa_004837 [Cucumis sativus][more]
BLAST of Chy3G052540 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G052540.1Chy3G052540.1mRNA