Chy3G052380 (gene) Cucumber (hystrix) v1

Overview
NameChy3G052380
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH03: 2577251 .. 2588348 (+)
RNA-Seq ExpressionChy3G052380
SyntenyChy3G052380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGCAACAACAGGCAAAAGAAAGCTCACGCATCTTTTTCGATCTTTAGCCTTTTCAAATCTAGAAGGGGTACAAAAGGAGACCACTGCAACCACAGTGGTTCTTGCCTGGACGAGATGCCGAGATTAGGCAAGGTGTGGCCGAGCGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATCGATAGGATCTATAGAAATCGTGTTTTTGAATCCGAGCGCCAAACTGTCACTATATCTCCCAATGGAATAAAATCCAATGTGTAAATAACTTGTCTATATGGAATTAGTTCGTTCAATAATGTATTTTTATTATAATTTTAAGAATTATATTGAGTTTGGCAAAGCTGCTGAGCGTACACTCATGCAAAAATTTACAAATTGCCATGCATTCAGGTTCAAGTCTAAATTTTATTCTCCCAAGTTAAAACTTAAATTTAGCAATGGAGTTTTCTTTAACCAAAAGACTAAGAGCATTAAGTGCAAGAAGAACATATGAATATTGATGGTTGTGATATAATAGATGAGTTCGATCAACTAATCAAACATTAAGACAAAGAGAAGATGTCATGTTTTGAATGAGTTAAAGAAAAAAATATTTTCGGAAAATTCATTTTCCATTATAAAAACTCTTTAAAATAAAAACACATGACAACTCTTTTTTAAGAGTGCTCTTATGTAAAAGTTTGTTAATTGTGAAATACTAGAAAGTTTTTTTTTTTTTTTTAATTTAAAATTATCATGAAAGAATTCATTGATGGCAACGGTAGTTGGAGTCGGTTCGGCGATCATCAGAAATATCAAATGTGATAACTTTTCTAAATTGATATTGGTTGTCAAAAGTTTAATGTTATGGTGTAGGCTAAAGGTGATCTTATTTCAAATAAAAAATAAATTAGCAATTTGAATTATTAGTCGTTTAAAGAAGTTTTTTTTTTCTTTTTTTTTTTCTTTTCTATAAATAATCTTTTCTTCTTCATTCATGAGGAGGCACACGAAGAAAAAATCACATTAAAAAAATCTAGATATTTTTACAATCTTCATATCCTCTCTTCATCCAAACCTCTAGTCTCCATAGCCCTCACTTCTCTTAGTCTTCACCTTCTTAGAAAAAAAATCAAAGCGTATTTAAAACCTTCATTTTGTCTTCTCTTGCTAACCAACTCCTAAATCTTCATCTTTCAAAAATAAAAATAAAAAATAAAAAAAATAAAAAACTCTTCCCAATGTCAAGAATCCAACACACAAGAAAAACTCTAAAATAGTTAGAGCTATATTGTAGAGCTTAGGTTCTAATAATGATCAACACTACAAACAACAAGAGAATTTAGTATTTTGAATATAAACATGTTTAAAATTTTTCCTTCTGATTTTAGTTATTGTTCTTCTTATTTCTCTATTTTCCTTTCTCTTACATTTATATCTTTATTATCTTATGAGTTTTTTTTTTTATATAATTTTTTGGTAAATTTACATAAATATAATAAAAGTGCTAAATATTTACGACCCGTATAACAATTTAAGAAAAGCTCATGAAGCCAATTATTTTTTCATAAATTTTATATTTTCCCTTATTGAATTTTGATTATTATGGGACGGTTTTTCCGTTCTTTTTCTTCTTCTTCCTTACGATTTATTTCTTTTCTTCCTATTATTAATTTCTTCGTATCATTACTTCTTCTTCTTCATATTTTCACTTCTTGTTTGCAATTTCTTAATTTCCTTTTCAAGAATTTCTTCTTTCTTCTTCATCTCTCATCTTCTTTTTCTCTTCTTGGTACAAGATCTAACTGATATTGGGTACAGGATCTAAAAAATCGTGTATCAATATCTAAACAATCAGTTGTATATCCCAAATAGATAGAAATTGACCACTATCACTAATAGATCGTTTAGCTTTGGTACAAGATCGTATAGTTTTGCTACAAGATTGTTTAGACTAAGTACAAGATTGTTTAGAGTGGGTACAAGAGTACAAGATTGTTTAGATTTGGTACAAGATCGTTTAGATTTGGTGCAAGATCGTTTAGACTAGGTACAAGCTAAGGGTATAAGATTGTTTAAACTTGGTACAAGATCATTTAGACTTGGTACAAAATCATTTTTTCAAGCGTCGTGTGTGACTGATTAATATCTGGGGTATTTTTGTTATTTTACGTTGTAGGCTTATGGACTTTTTTCTTTTTCAAAATTGTTCTATACAGTATAAATATTTTCGCCCATTATTCTACTTTTGAAAAAACCTCTTTTGTGCATAGTTTCATTTTGTTTTTGCTATTCATAACAATTCCGCTAAATAAAATTCATAAATTTTAAAATTATAATTCGCTTTGAATGTGATAGAGTAAAATATTTAAATTTAAAATATTATATAAACATTTTCTATTGCAAATTTTAAAATTTTAAATTAAAAAATATATATTTCTATTAAAATTTTAAAATTTTAAAATCAAAGTAATATGTAAATTTAAAGGTTGAAAATTAAAAAATTAAAAAGTAAAAAGTAAAAAAGTAAAAGTAAAAATTAAAAGGGCCAATTGCATAAATGGCAAAAAAGTCCAAAATAATAGCATATAAAGAAGAAAAAAATAGTAAAATACCCACGTCAAACCTCCATTTTGGTTGTTTCTTGTCGAATTTATCAATTTAAAAACTATCACTGTTAGCATATAATAGTGATATATGCTATCATTGATGACTTTTCAATTTGAGAAATGATTTTTTCGCATTGAAAGTTATAACTAATAGCTACAATTAATGAATATTACTGATAGTTGTTATTAATTGTTCCCACTGCTAGTTACTATGAGTGATAATTTGTCACCACTATGAGTATCTTTTTTCTAATTTTTTTAAAATTGAAAGCTATCATTGATAGCAATTCATATCTGTTATACGTTGCTATCTTTTTTTAGAGAGGAAACAAGCAAGTTGTAAAATGCTTTCAGGTTTTTCTAGAACGGTATAACCTTCTAGCAAAACAAAGCTCAAATTTATTAATGGTAATGTAGTTACAAGAGCTAAGTTCATTTGCAGAACCAACGCCCAATGAAGTTAAAATATCAATGCATTAATATTTAGGGAGATTGTTATGTGGCTATTATACATTGCTATAATTCATAGATGCTATCAATGATAGCTTTTAATTTGAGAAATATGTTATCAGTTGATATAAATAATAATGATTATCAGCGATAACTTTTACCAATGATAGTCAGTAAGGGTAGAGTAATTTTTAATTTGAGAAATATGATATGATCAGTTGCTATAGTTTAGCTGCTATCGCTCATAACTACTATCAATAATAGTTTTCAATTTAAGAAACGTGGTATTGATCGTTGCTATCATTGATATCTTCTATCAGCGATGTTGCTATCAATTGATATTCTTAATAGCTACTATAAGTAATTTTTCTATTTGCTATCAACGTAAAATGATATCACTAACATATAATATCTATCAATAATTGCATTACAAGAATATCATTGATCACAAGTTTAAGCGATAACATTAGAAGAATATCGTTGATAGCAAGTATAAGCGATATCATTAGAAGAATATTTTTTATTAAGTGATATCTCCTTAGCAAACATATCAATTCTGAATTGATCAGGTTTAATTAGGTTATAAATTGAGATTTTTGATAACTACTATAAATAATATTCTTCTATTGCAATCACTAATAATATGTATTAGTGATATATAGCAACAGAAGAATATCACTAATAGCATTTATAAGTAATATCCCTAATAGGCTACTATATATAATGATATCAATGTAATGCTACTATAAAGTCATATTGTGGTTGTTTATTTTTTAGCATAAATGGACAAAGAAAAGAGATCAGATTAGCATACTATTGGTAATAGCTTTCAATCACTAATAATATACTATTCATATGATAGCTCTTATCGCAAATAGCTATACTATAGATGAAATTGATATAGTTGCAACTTTTGTTGAAATAAATTATTGATTTCAGGTTATGCTATCAACAGTTATATCATATAGAAATTCAAAGTTTAAGTTATCAGTGATAAATTCATGAAAACCACATTGACATATTAGTCGTGTTGTCATTGATAGAAATCATCACTAGTAGCATGAAAAACATATTTTCCTGGCATATTTACAATATGTCTGGTAAAAATTGCAATTTTTGCACATATTGTTCCCTTTTACTATAGATAATATTTATTTTCTAATTTGTGCTATTTGGTGAAATTTTCCAAATTAAAAATTAAATCAACATATATATATAATAAAAAATACAAGAGAAATATTGTAAATGACAAAACCGATGAAAATATTTACAAAATATAACAAAATTTCATATTCTATCAATGATAGACTTTTATCAGTGATACACTTCTATTAGTGTTCTATCAGAATCAATCAATGTCACTAATAAATATTAATAGAAATCTATGAATGTCTATCAGTGATAGATTTAGAAATTTTACTATATTTTGAAAATATTTTGATTCATTTTGTTATATTTGAAAATATTTCTAAATATAAACAAAAGAAAAAAATAAATATAAAAAGTAACAGGTTAATTTTCATAAATAGAACAAACCGGCAAAATATTTACGACCCGTGTAACAAAATGAAAAAACTTATGAAACTGACCATTTTTTTTTTAATATTTCAGATTTGCCCTTCTTTTTTACCATCTTTCTTCTCTTCCTCTTCTGCAATTTTTTTCTTTCCATCGTCGTTTTTTCTTCTGCAATTTTTTCTCTTTTTTTTTTCAAATTGTTATTTGGTTCAAAATCGTGTATCAAATATAAAATATCTTTTTTTTTTTCAAACTGTTATTTGGTTATTCCAAATATAAAAGATTGGAAAAAAATCGTTAGGATATTGGATAGCCAAAGCTAAACGATCGTGTACAAAAATAGTCAAATCTAAATGATCATGTATAAAGAAGCTTAAAAAAAACGTTTAAATTTGGGTAGCTAAATTTAAATAATCAAATCTAAACGATTATGTTCCAAATATAAATGATCGTGTACCAAATCTAAACGATCATTTTCCAAATATAAATGATCGTTTTTCGAATATAAGCGATCATTTTTCAAATATAAACAATCGTTTTCCAAATATAAACGATCGTGTATCAAAAAAACTTAAAAGAAATCGTTGAGATTTGTCTACTAAAATTTAAACGAATCTAAACGATTGTGTACCAAAAAATTATGAAAAAAATCGTTTAGATTTGGCTACATAAATTTAAACGATCGTGTACCAATCCAATGTTTAAAAAGGATTAGGAAAATCTTTTAAACATAACAAAATGATTTGAACGAATTTGCAAATTTAAATTTAAACAATTTTTTCAAATTTACCAATTTAAACGATGTGTTATTTAAGTTTGCCAATTTAAACGATGTGTTATTTAAGTTTGCCAATTTAAATGATGTGTTATTTAAGTTTGCCAATGTTTCAAATTTGCAAATTACTATAAATAATGGAAAGAAACGATTTTTGGCTACATAAATTTAAATGATCATGTATCAATCCAATCGTGTACCAATCCAATTTAAATAACACACCGGAGCAAAGAAATTTTTTTTGCTACTTCCTGTTGTGCCCAAAGTTAGTTGTACACTTTTAAAAGGACTAGGCATCCAATGTTTAAAATACGTTTTAAAATGGTAATAGTTGGGATCGAAAGGGTAAGGGTCTAGTCTACACATTTAAAGGATGGACGACCAAGTTAAATTAGGTGATTTTGCTAGGGTGTGACAAGTTTGTATCATTGCATAGCAAGTATTACTATCTTGTTAATTGACTAAATATATTTGTTTAAAACCCTCTAGCGTGTAGCTTGAGCTGTTTTGTGGTTGTTCCAAAATATGTTTCATCAGAGTATTCTTGTCTTAGTAGTTGTCATGAAAGTTGCAGATCTTGCACAATCTGAGTATTCTTGTCTTAGTCATTGTCATGGAAGTTGTAGATCTTACACAATCTTTCTTTCCATTATTTATAGTAATTTGCAAATTTGATCCGCTAGGAAACTTTCAGAACTTTGTTGATTTATTCAGTGGATATTTTCTTTTCTCCGGTGTGTTATTTAAGTTGAAGAATGATTTGTTGCTAATACGGTTGTTGCACGTATTGTACTAATTGTTCTTTACCAAGAATTTGATAGAATAGTGTGTTTGAAGCAAACAACTTTAGGGCTGCGAGTTCCTTGTACTACAATTCCTTATACCACAATTCAATACCAGCACCTCTTGAAAAGACAAATCTAATGAATTACTCGTCTACATAATGAAAATTGTACAATTAGAGCCTTATAACCAAAGGTTTTCCATTAGTAATATGAAACTCGTTATAATACAAACAAATTCTAAATTGTGGAGTACTATCATTATCATTATGAGTGTAACAAACAATAAAAAAAAACCCAAAATGCAAGTCGATTCATGCCAATCCATTGGTTTGGTTCTGTTTATTAGCGTAAAATTGGACATATATTGGTTTTTATTGCCAAAAAAGTTGAGTTGGTTTAGTTCAATTTTTTTTATTGAGGGCCAATGCTATAGGTTATGAAGAAATGACCCAATTTAGAACGATGTCCAAGGTCTCGAAAATTAACATCTAACTACTGGGTGGCCTCATTTTGAGTGGAATTAATGTTTTTAGACCATAAAAGCCGAAAAAAATATGGCTGAATGTCAATTTTTCGCTTTCGTCCCAAAACGTTGAAAAAATAGCCAATGCTAATCATCAAAAGCCAACCTTTGTCTTCACCGCTTGGCCGCACTTTACTTGTGCTTAACACTTCCTCCAGAACTGGTACCATGCTCATAAAGATATCCTTTCCTAGCTCTTTTAGATTTGAAAAAGCTCAATAAGCCGAAGAATAATGAGTCTTCTTTTTGCATGCGGATGCCTTTCATGGTATATGAAAGAAGTAATAGATGGAAAATGAGTTCAATTGTGCAATGGTTTGGAGTGAGGAAATGGAAAGAATCCTATTTGCATAAGAGAAGAAAAAGGACTGAAGAATGAACAAGAATCTAAGGGATTTGTGGGGTAACTGTTAAAACTTATGTGGAACAACACTTTTCTAGCTAAGAATCTAAAGGACTAAAGTTTTCTTCATGTTCCTCCATTGGTTTGTGCCATTGTTGACCAACCAAGAATCCCTTTGTTAACTCTTTGAATAATTCCAAATTTACAGCATTAGTTCCCTCTTTTGCTAAAACTCTACTTTTTGCCACTGAGCTTCCCTAGCTGCACATGGATGGAGCCATGAGTCTTGCTAATGAAGAATAGAACTCCGTATTGTTTATTTATATATGCGAGATTATAGACAAGTTTAATGAATGCACAACTTAATTAATTATGGTTAGTAATTTACTTATCATTTTTGGTATAAAGTTTTGAATATAATTATGGGTATGTTTTAAATAATGTAAAAACAAATTAAAACCTATGAGGAAAAAAAGTATAAGTTCTTCTTCATCCTTTGGTCTGCCATCTCTCTTTCGATTATTATTTGATTCTATTTCTCTAAAAACTACGTCTAAGAGGGATAGGAAAAACCATATGTTTACCCCCTAATAATACTTCGATAAACCAACGTGAAAAGTGTCACCACCTGCTCAAGACAACACAAAATTTTTCCAATGCCCTCAAAATAGGTTAATTATATAAAGAAATGTAAAAATAAGTTGCCGCCCATAATCATTTTTACGGTGTGATTAGAAACCGAAATAAAATAAATAATTTTGAATTAAAAAACAATATTAGTTTGCAAACACAAAAGTTGAGTTTGGAGTCATTTAATTTGTATATGGAGAAGGTGGTTAGGACCCATATCACACTCATAGAACAACGTGATCAAATTTCAAATCTTGAATAAAAACTACTCTTTAATTTATGTTTTTTAAAAAATGTCTTATTTCAATTTTCATCATTTTCACCTTTGAACTTCTTGTGATTATAGCAATCAAGAACTTCATGTGATTATAGCAATCAAGAGCTCCATGTCCTTGCTTTTGGCATATTTGACAAGACATATGACCAAGAGGCCCAAAAAAAGGCTCTAGGCACAAAACCAGATGTAGGTGCAGATCCAATATATAAAGCCACGTATATGAGGATTAACTGGGCAGAAATTAGAGGCTGGGTGAAATAGGTTGAAATTATGATTGGGCTGAAATGATTGTATGGGCATTGCCTCCATATCCACGTAACCCGGTTCCTGATCCACCCGAGCCACGCATATGAGAATAATTGGAAGTAGAATTAAAAGTAGGATTACCAGATCGTCTTCCACATCGACGACCATGATTTTGGGATGGATGGAAAGCAATCGTGGATGTGGGAATGGTTTCAACGGTGGAATTCTTGGCTATGGTTGATTCTTCTGCAATGGGTATGGTGTTCTTCAAGGGAGATAGTGCCCTTACGAGTTTGAATGGAGGTCCGAAAAGCATTAAAGACAAAGGGGAGACTCAAAGTGTGTTGGATCTTAAGTCAAGGATGTGGATCTAGTGTTGGAGGAGTACTTTTTTTCAAGAGAAAGCCACAAATTTTTGGAAGTGTGATTGAGCCGACAACATAGGCAAGGGCAGACGACGATAATGTAGCATTTATTAAAGTGATGAGAGTTTGGTCACGAGAAAGCCATTGTAGATGTTTAGGGTTCATTACAAGAGTAGTTTCAATAGTTGGTGATGGTAGATGCTTTCGAGGACAGGAAAGAGAATCGTCAATATGGCTAAAAAGGGAATGAGCTTTGAGTATGGAGGAGACTTGGTATTTCCAGAGGATATAATTGGTAGAGTCAAGACGAATGGACAAGAGATTGCAAATGATTGATAGCAAGAAGAGAATGGAGGTGGGGACATGTAACGCCCCAGGCCTAGGATTTAGAATTCAGATCTTCGACATTCTCATGCATCCCCTATGACTCGACAACATCATCCTTACTGTCTAAAAGGCTTAGAGCGAAAGTTCTCCCCAAAAACCAACACGAGTCCTTTCAGCATGTTTTGTCCTTACTCACCTGCATCCTAAGAAAATTTTCAGGAGGTCACCCAACATAGAATTGGTCTAAGGTAAGCATCTTAACTTTGGAGTTCCTATGATCAAGCCATCGAAAAGAAGATGCACTTTGTTGGTATAGGAAGTAACTTTTAATTCTTTTAAGTCTTTCTTAACCTTACTTTCATATACTCAGGATCCCTCTCATTCAGATGTGATACCTGTTAATTCAAGTCCCACTCCTAAACTCGGGGCGTTACATGATAGATGTGTTTCCTAAAGGTGAGGATTTGGTGGCACTACAAGAAACAAGACTTTCGCCAACGCACAATGGCGTAGGCTAAAGGCCATACCAGCATCGACAAAGGCTTTGTCGACACACATCCAGACGTCGGCATGAACGTCGGCAAAAATGTATAGGGATAACTTTTGTCGAAGTTGATAAAAGGCCAGGTCGGCGAAAGCCAAATGCCGACGCATAGAGTACCGATGTGAGACCGACGTCGCGATAAAGGTAACACTAACGTGTGTCAATCGTGTCAGCATACATAATACCGACGTAGCATAGACATCGATAATACTGACGCCGCATCGGTAAAACACCTTTCTCGACGCATTACGAAGACGTCGAGGAAGATGCCTTATGCCGACGTCGTGTCTACGTCAGCAAAAAAATAACTTTTTTTTACTATTTGTTTTATTATTTTGTTTTTGTTATTAATATTACTTATTGTTTTTAGTTTCCCATTTGGCTCAAACGTAATATGCAGTAATTTCTAAATTTTAAAATATTACATTAATTATAAGAAATCAAATACATTATAAATGTAAAAAATGTTTACGAACAATTATAATTAAAAAAAAAACCTAAACCTAGTAGACGGTACACTACAAGAAATTTCATTTTTAGTGGCGCACCAAAAACGTCACTAAAATGCAAAAAAAAAATGTCGCTAAAAGTATTAGCGATGCAAAGCCATTCGTCACTAGGACTGTCGCTATATCCGCATAGCTAAGAGTATTAGCGACGCAACATTACACGCCACAAAAGATATACTTTTAGTGACATGTGTGTGTTACCAAATGATTACTTTTAGTAACATATATTATGTCACTATTTATTTTTTTTAGTGACGTATTATACTTGCCACTAAAAGTGATGTTTTAGTGAAAAATAATATTGTTGCAATAGTACAAATTTATTAAATTAAATTGTTGTCTTATTGTCTATTTTTTATTATGCAAAATAGTTAAAAATCGATATTATGGGTACGTGTAAATAAATATTTTTTTTACGCCAATGAATAAATAAAATTAATATGCTTTTATAAACTATAATATTCCTCTTTTACATATGTATATACAAAATGAAACCTTAATATTGTGTTTATATATACATTCTACAATAGTACATGAAACAAGATCCAAATACAAGATTTATAAAATAAGAAAATCCTAAACGCCTTCACAGTCTTCAACCTTCAACGATCGCTTAGTTATCTTTTACACCAAGCAGATTCTACTTCTAACAAAAATAAGCTGGAAACAGAGGGGAGAAGACAATGTACAAAGCAGAAGTAGAAAAACAAGTTAGTTAGCTCAATCAGACTCCAGCATTAGGCAATAACATTTTGTAAGTTACACAAAAGAATGCTCAAAGAGTTTAATTACCAGAGTTATCTTTTACTCTCTGAAACCCTCTCAAACCTCATCCAAACAATACAAACCTAATCACAACAAAATTTTAAAGGTTAGACCCAATAGAAAAAGAATAATGGATGAAACTTTTACATAATGGGTGAAGAATGGTGGTGCAATATTGCTTCATTCTTCTCACATAAATTACCATAAACAAAATTCTAAATCATGGATATTTAACTATATTGCTTCATTCTTCTCACATAAATCACCATAAACAAAATTCTACATCATGGATATTTAACTATATGAATATTTGTTACTCACCACAACAATAAGAAATGCAGTTGTAAGGTTTTCACAGGCTTCACAAGAAGCATTACTTTAAATAACAAAAGGAAACCATCTGCACAAAGATGA

mRNA sequence

ATGGGAGGCAACAACAGGCAAAAGAAAGCTCACGCATCTTTTTCGATCTTTAGCCTTTTCAAATCTAGAAGGGGTACAAAAGGAGACCACTGCAACCACAGTGGTTCTTGCCTGGACGAGATGCCGAGATTAGGCAAGGTGTGGCCGAGCGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATCGATAGGATCTATAGAAATCGTGTTTTTGAATCCGAGCGCCAAACTGTCACTATATCTCCCAATGGAATAAAATCCAATGTTTGTAAGGTTTTCACAGGCTTCACAAGAAGCATTACTTTAAATAACAAAAGGAAACCATCTGCACAAAGATGA

Coding sequence (CDS)

ATGGGAGGCAACAACAGGCAAAAGAAAGCTCACGCATCTTTTTCGATCTTTAGCCTTTTCAAATCTAGAAGGGGTACAAAAGGAGACCACTGCAACCACAGTGGTTCTTGCCTGGACGAGATGCCGAGATTAGGCAAGGTGTGGCCGAGCGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATCGATAGGATCTATAGAAATCGTGTTTTTGAATCCGAGCGCCAAACTGTCACTATATCTCCCAATGGAATAAAATCCAATGTTTGTAAGGTTTTCACAGGCTTCACAAGAAGCATTACTTTAAATAACAAAAGGAAACCATCTGCACAAAGATGA

Protein sequence

MGGNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNVCKVFTGFTRSITLNNKRKPSAQR*
Homology
[Close]
BLAST of Chy3G052380 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 1   MGGNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVA 60
           MGGNNRQKKAHASFSIFS FKSRRG KGDHCNHSGSCLDEMPR GKVWPSDEDKAHHWVA
Sbjct: 1   MGGNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVA 60

Query: 61  EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 100
           EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV
Sbjct: 61  EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 99

[Close]
BLAST of Chy3G052380 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.8e-47
Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = 0 

Query: 1   MGGNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVA 60
           MGGNNRQKK+H+SFSIFS FKSRRG KGD+CNHSGSCLDEMPR GKVWPSDEDKAHHWVA
Sbjct: 1   MGGNNRQKKSHSSFSIFSFFKSRRGRKGDNCNHSGSCLDEMPRSGKVWPSDEDKAHHWVA 60

Query: 61  EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 100
           EPGIDRKAKDYIDRIYRNRVFESERQT+TISPNG KSNV
Sbjct: 61  EPGIDRKAKDYIDRIYRNRVFESERQTITISPNGTKSNV 99

[Close]
BLAST of Chy3G052380 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.6e-42
Identity = 84/97 (86.60%), Postives = 88/97 (90.72%), Query Frame = 0 

Query: 3   GNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVAEP 62
           G NRQKK+H+SFSIFS FKSRRG KGDH +H G+ LDEMPR  KVWPSDEDKAHHWVAEP
Sbjct: 2   GGNRQKKSHSSFSIFSFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVAEP 61

Query: 63  GIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 100
           GIDRKAKDYIDRIYRNRVFESERQTVTISPNG KSNV
Sbjct: 62  GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

[Close]
BLAST of Chy3G052380 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40
Identity = 81/97 (83.51%), Postives = 87/97 (89.69%), Query Frame = 0 

Query: 3   GNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVAEP 62
           G NRQKK+H+SFSIFS FKS+RG KGDH +H G+  DEMPR  KVWPSDEDKAHHW+AEP
Sbjct: 2   GGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAEP 61

Query: 63  GIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 100
           GIDRKAKDYIDRIYRNRVFESERQTVTISPNG KSNV
Sbjct: 62  GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

[Close]
BLAST of Chy3G052380 vs. ExPASy TrEMBL
Match: A0A0A0K8W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.1e-32
Identity = 71/99 (71.72%), Postives = 82/99 (82.83%), Query Frame = 0 

Query: 1   MGGNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVA 60
           MGG++RQKK H+SFSIFS FKS+RG KGD   H G+  +++P   KVWPSDEDK + WVA
Sbjct: 1   MGGSHRQKKTHSSFSIFSFFKSKRGRKGDVYEH-GTNWEDVPSSSKVWPSDEDKGYRWVA 60

Query: 61  EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 100
           EPGIDRKAKDYIDRIY+NRVFE+ERQTVTI PNG  SNV
Sbjct: 61  EPGIDRKAKDYIDRIYKNRVFETERQTVTIHPNGPNSNV 98

[Close]
BLAST of Chy3G052380 vs. NCBI nr
Match: KGN45869.1 (hypothetical protein Csa_005516 [Cucumis sativus])

HSP 1 Score: 207 bits (528), Expect = 3.19e-67
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 1  MGGNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVA 60
          MGGNNRQKKAHASFSIFS FKSRRG KGDHCNHSGSCLDEMPR GKVWPSDEDKAHHWVA
Sbjct: 1  MGGNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVA 60

Query: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 99
          EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 99

[Close]
BLAST of Chy3G052380 vs. NCBI nr
Match: KAA0035003.1 (hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343.1 hypothetical protein E5676_scaffold155G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 200 bits (509), Expect = 2.52e-64
Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = 0 

Query: 1  MGGNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVA 60
          MGGNNRQKK+H+SFSIFS FKSRRG KGD+CNHSGSCLDEMPR GKVWPSDEDKAHHWVA
Sbjct: 1  MGGNNRQKKSHSSFSIFSFFKSRRGRKGDNCNHSGSCLDEMPRSGKVWPSDEDKAHHWVA 60

Query: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 99
          EPGIDRKAKDYIDRIYRNRVFESERQT+TISPNG KSNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTITISPNGTKSNV 99

[Close]
BLAST of Chy3G052380 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus])

HSP 1 Score: 177 bits (449), Expect = 3.45e-55
Identity = 81/97 (83.51%), Postives = 87/97 (89.69%), Query Frame = 0 

Query: 3  GNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVAEP 62
          G NRQKK+H+SFSIFS FKS+RG KGDH +H G+  DEMPR  KVWPSDEDKAHHW+AEP
Sbjct: 2  GGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAEP 61

Query: 63 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 99
          GIDRKAKDYIDRIYRNRVFESERQTVTISPNG KSNV
Sbjct: 62 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

[Close]
BLAST of Chy3G052380 vs. NCBI nr
Match: KAG6592306.1 (hypothetical protein SDJN03_14652, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170 bits (431), Expect = 1.91e-52
Identity = 79/98 (80.61%), Postives = 85/98 (86.73%), Query Frame = 0 

Query: 1  MGGNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVA 60
          MGGNNR KKAH+SFSIF+ FKS++  K DHC+HS SC DEMPR GKVWPSDEDK H WVA
Sbjct: 1  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHS-SCWDEMPRSGKVWPSDEDKTHRWVA 60

Query: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSN 98
          EPGIDRKAKDYIDRIYRNRVFESERQTVT+  NGIK N
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN 97

[Close]
BLAST of Chy3G052380 vs. NCBI nr
Match: KAG6592316.1 (hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 163 bits (413), Expect = 1.06e-49
Identity = 76/96 (79.17%), Postives = 81/96 (84.38%), Query Frame = 0 

Query: 1  MGGNNRQKKAHASFSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHWVA 60
          MGGNNR KKAH+SFSIF+ FK RRG K DHC+HSG C DEMPR  KVWPSDEDK H WVA
Sbjct: 1  MGGNNRSKKAHSSFSIFNFFKFRRGRKEDHCDHSG-CWDEMPRSNKVWPSDEDKMHRWVA 60

Query: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIK 96
          EPGIDRKAKDYIDRIYRNRV ESERQTVT+  +G K
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVLESERQTVTLPASGTK 95

[Close]
BLAST of Chy3G052380 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 43/91 (47.25%), Postives = 55/91 (60.44%), Query Frame = 0 

Query: 1  MGGNNRQKKAHAS--FSIFSLFKSRRGTKGDHCNHSGSCLDEMPRLGKVWPSDEDKAHHW 60
          MGG NR   +H+S  FS+FS FK+RR     H   +    D+     K   SDEDK  +W
Sbjct: 1  MGGKNR---SHSSKRFSLFSFFKTRR----SHRVEADGSWDDFGYTRKAMASDEDK-RYW 60

Query: 61 VAEPGIDRKAKDYIDRIYRNRVFESERQTVT 90
          VAEPGIDRKA  +I + +  RV ESERQT++
Sbjct: 61 VAEPGIDRKASAFIAKFHATRVSESERQTLS 83

[Close]
BLAST of Chy3G052380 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-09
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0 

Query: 39 DEMPRLGKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTV 89
          D++    K W SDEDK  +WVAEPGIDRKA  +I + + +RV ESERQT+
Sbjct: 18 DDVIYTRKAWASDEDK-RYWVAEPGIDRKASAFIAKFHASRVSESERQTL 66

The following BLAST results are available for this feature:
BLAST of Chy3G052380 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G052380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAK61.1e-4996.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1[more]
A0A5A7SWT91.8e-4791.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KBW18.6e-4286.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1[more]
A0A0A0K7Y21.6e-4083.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1[more]
A0A0A0K8W02.1e-3271.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1[more]
BLAST of Chy3G052380 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45869.13.19e-6796.97hypothetical protein Csa_005516 [Cucumis sativus][more]
KAA0035003.12.52e-6491.92hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343... [more]
KGN45870.13.45e-5583.51hypothetical protein Csa_004960 [Cucumis sativus][more]
KAG6592306.11.91e-5280.61hypothetical protein SDJN03_14652, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6592316.11.06e-4979.17hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Chy3G052380 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05858.12.4e-1247.25unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G26620.17.3e-0956.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33511:SF17RIBOSOMAL PROTEIN S12coord: 1..89
NoneNo IPR availablePANTHERPTHR33511OS06G0632400 PROTEINcoord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G052380.1Chy3G052380.1mRNA