Chy3G052270 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G052270
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	60S ribosomal protein L3
Location	chrH03: 2348198 .. 2350389 (-)
RNA-Seq Expression	Chy3G052270
Synteny	Chy3G052270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCACAGGAAATTTGAGCACCCAAGGCACGGGTCCCTTGGATTTCTTCCAAGGAAACGAGCAGCTCGTCACCGTGGAAAAGGTTCTTTTTCTTTTAGGTTTTGACTAGTTTAACTTATTATGTTTGAACGTAAGTGTATCTTGATTAAAACAACCAAAGAGACATATGATATTTCGTTGATGAGTGAAAATTTTAATTATACGATTGTAACACGATGACAGATAGTTGTGCCTATTTTTTCCCTCATCCTTTTAATCTTATATTCAATAATATTGATTTTACAACTTTCCCAGTTGAGACATGCTCAACAATCAACATTTATGTATTTTAGTATTGTATTGTGAGAACTGAGCTTTTTTTAATTTGTTTTCCAATCTGCAGTGAAGGCTTTTCCAAAGGATGACGCAACCAAGCCTTGCAGGTTGACTGCCTTTTTGGGTTACAAGGCTGGAATGACCCACATTGTCAGGGAGGTTGAGAAGCCAGGATCTAGTACGTGTTCTTTGAATTCACTAATCTATTTGGATGACCTTGTTGTATGCATTGCATTAACTTTTATGAAGCTTGCAATTAATTCTTACACTTGGTTTCTATTTTGTGTTTTTTTGTAGAACTTCACAAGAAGGAGACATGTGAGCCTGTGACAATCATTGAGACCCCACCGATGGTGATTGTTGGTGTTGTTGGATATGTGAAGACCCCACGTGGCCTCCGCACTTTGGGCACTGTATGGGCTCAGCATTTGAGTGAGGAAGTTAGGAGGAGGTTCTATAAGAACTGGTGCAAGTCAAAGAAGAAGGCTTTCGCCAAGTACTCTAAACAATATGAAACTGATGAGGGAAAGAAGACCATCCAGGAGAAGCTTGAGAAGCTGAAGAAATATGCATCTGTGATCCGTGTCTTGGCTCATACTCAGGTAATGAAGTGGACGTAAATTCAACTGAGTACCCTATATTTATGTAGAAATAGTATATCAGACTAATTTCAGAATGAGCATATCCGTTTTCAGTTTTCATTAGAAGAACTCAAGATTCTTGGATTATTTGAATTTGTTGGTTAGTCTATTTGTGCAGGCAACAGATCTATATATTTCTCTTGCTCGTCTAAATCCAATTGTCCTTGAATATGAAGTTTGTTGGTAGACTGATTTTTCTTGCTGGTTACTCTATTAAAGCTGTTGAAGATATCATTGGTTTTTCTGTTCTCATCTTATTTAAGGATATCAACCTACTGATCTGTAGTATGTTTAATGTTTTAGAACTTAGTGCACTTTAGTAATGCTTGGTTTTGTTATCTGGTGAGGTTTCATATTGTTTACTAACTCGGGCAAGTTGTTTCACCAAGATGAATTGTTTTGTATTTAGTGTGCACACTAGTGATGTTACTTATGTTTAATGGTTTAGAACTTTAATGCATTGCTTTGACTTTTGTAGATCACCAAGATGAAGGGATTGAAGCAAAAGAAAGCACACCTGATGGAGATCCAGGTCAATGGTGGTTCAATTGCTCAGAAGGTGGACTATGCCTACGGTTTCTTTGAGAAGCAAGTTCCAGTAGAAGCTGTTTTCCAGAAAGATGAGATGATTGACCTTATTGGTGTGACCAAGGGTAAAGGTTATGAAGGTGTTGTCACTCGTTGGGGTGTTACACGTCTCCCCCGTAAGACTCACAGGGGTCTTAGGAAGGTGGCTTGTATTGGTGCATGGCATCCTGCTAGAGTGTCATTCACTGTTGCGAGGGCTGGTCAGAACGGTTACCACCACCGAACTGAAATGAACAAAAAGATCTACAAAATTGGAAAGACGGGGCAGGAATCGCACACTGCTATCACTGAATTCGACAGGTTAGCTTGCTACATGAGTTGAATAGCTATCTCAAAGTAGCTCTCGTATTTGGTGTCTCTTATTTTGCTTTCTTTGTTTGAAACAGGACCGAGAAGGACATTACGCCCATGGGTGGTTTCCCTCACTATGGTATCGTGAAGAGTGACTACTTGATGATTAAGGGAGGTTGTGTTGGACCCAAGAAGAGGGTCATCACCCTTCGTCAGTCTCTTCTCAAACAAACTTCTCGTGTGGCTCTTGAGGAGATCAAACTTAAGTTCATCGATACATCCTCGAAGTTTGGCCATGGACGCTTCCAGACCACACAGGAGAAACAGAAGTTCTTTGGTCGCCTCAAGGCTTAG

mRNA sequence

ATGTCTCACAGGAAATTTGAGCACCCAAGGCACGGGTCCCTTGGATTTCTTCCAAGGAAACGAGCAGCTCGTCACCGTGGAAAAGTGAAGGCTTTTCCAAAGGATGACGCAACCAAGCCTTGCAGGTTGACTGCCTTTTTGGGTTACAAGGCTGGAATGACCCACATTGTCAGGGAGGTTGAGAAGCCAGGATCTAAACTTCACAAGAAGGAGACATGTGAGCCTGTGACAATCATTGAGACCCCACCGATGGTGATTGTTGGTGTTGTTGGATATGTGAAGACCCCACGTGGCCTCCGCACTTTGGGCACTGTATGGGCTCAGCATTTGAGTGAGGAAGTTAGGAGGAGGTTCTATAAGAACTGGTGCAAGTCAAAGAAGAAGGCTTTCGCCAAGTACTCTAAACAATATGAAACTGATGAGGGAAAGAAGACCATCCAGGAGAAGCTTGAGAAGCTGAAGAAATATGCATCTGTGATCCGTGTCTTGGCTCATACTCAGATCACCAAGATGAAGGGATTGAAGCAAAAGAAAGCACACCTGATGGAGATCCAGGTCAATGGTGGTTCAATTGCTCAGAAGGTGGACTATGCCTACGGTTTCTTTGAGAAGCAAGTTCCAGTAGAAGCTGTTTTCCAGAAAGATGAGATGATTGACCTTATTGGTGTGACCAAGGGTAAAGGTTATGAAGGTGTTGTCACTCGTTGGGGTGTTACACGTCTCCCCCGTAAGACTCACAGGGGTCTTAGGAAGGTGGCTTGTATTGGTGCATGGCATCCTGCTAGAGTGTCATTCACTGTTGCGAGGGCTGGTCAGAACGGTTACCACCACCGAACTGAAATGAACAAAAAGATCTACAAAATTGGAAAGACGGGGCAGGAATCGCACACTGCTATCACTGAATTCGACAGGACCGAGAAGGACATTACGCCCATGGGTGGTTTCCCTCACTATGGTATCGTGAAGAGTGACTACTTGATGATTAAGGGAGGTTGTGTTGGACCCAAGAAGAGGGTCATCACCCTTCGTCAGTCTCTTCTCAAACAAACTTCTCGTGTGGCTCTTGAGGAGATCAAACTTAAGTTCATCGATACATCCTCGAAGTTTGGCCATGGACGCTTCCAGACCACACAGGAGAAACAGAAGTTCTTTGGTCGCCTCAAGGCTTAG

Coding sequence (CDS)

ATGTCTCACAGGAAATTTGAGCACCCAAGGCACGGGTCCCTTGGATTTCTTCCAAGGAAACGAGCAGCTCGTCACCGTGGAAAAGTGAAGGCTTTTCCAAAGGATGACGCAACCAAGCCTTGCAGGTTGACTGCCTTTTTGGGTTACAAGGCTGGAATGACCCACATTGTCAGGGAGGTTGAGAAGCCAGGATCTAAACTTCACAAGAAGGAGACATGTGAGCCTGTGACAATCATTGAGACCCCACCGATGGTGATTGTTGGTGTTGTTGGATATGTGAAGACCCCACGTGGCCTCCGCACTTTGGGCACTGTATGGGCTCAGCATTTGAGTGAGGAAGTTAGGAGGAGGTTCTATAAGAACTGGTGCAAGTCAAAGAAGAAGGCTTTCGCCAAGTACTCTAAACAATATGAAACTGATGAGGGAAAGAAGACCATCCAGGAGAAGCTTGAGAAGCTGAAGAAATATGCATCTGTGATCCGTGTCTTGGCTCATACTCAGATCACCAAGATGAAGGGATTGAAGCAAAAGAAAGCACACCTGATGGAGATCCAGGTCAATGGTGGTTCAATTGCTCAGAAGGTGGACTATGCCTACGGTTTCTTTGAGAAGCAAGTTCCAGTAGAAGCTGTTTTCCAGAAAGATGAGATGATTGACCTTATTGGTGTGACCAAGGGTAAAGGTTATGAAGGTGTTGTCACTCGTTGGGGTGTTACACGTCTCCCCCGTAAGACTCACAGGGGTCTTAGGAAGGTGGCTTGTATTGGTGCATGGCATCCTGCTAGAGTGTCATTCACTGTTGCGAGGGCTGGTCAGAACGGTTACCACCACCGAACTGAAATGAACAAAAAGATCTACAAAATTGGAAAGACGGGGCAGGAATCGCACACTGCTATCACTGAATTCGACAGGACCGAGAAGGACATTACGCCCATGGGTGGTTTCCCTCACTATGGTATCGTGAAGAGTGACTACTTGATGATTAAGGGAGGTTGTGTTGGACCCAAGAAGAGGGTCATCACCCTTCGTCAGTCTCTTCTCAAACAAACTTCTCGTGTGGCTCTTGAGGAGATCAAACTTAAGTTCATCGATACATCCTCGAAGTTTGGCCATGGACGCTTCCAGACCACACAGGAGAAACAGAAGTTCTTTGGTCGCCTCAAGGCTTAG

Protein sequence

MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYKNWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAHLMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAITEFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA*

Homology

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BLAST of Chy3G052270 vs. ExPASy Swiss-Prot
Match: P35684 (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 SV=2)

HSP 1 Score: 709.1 bits (1829), Expect = 2.7e-203
Identity = 337/389 (86.63%), Postives = 370/389 (95.12%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FPKDD +KPC LT+F+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+VIVG+V YVKTPRGLR+L +VWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KY+ +Y++D GKK IQ +LEK+KKYAS++RV+AHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQ+NGG+IA KVDY Y FFEK++PV+AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YKIGK+GQESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYG+VK DYLMIKG CVGPKKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTT EKQ+FFG+LKA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389

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BLAST of Chy3G052270 vs. ExPASy Swiss-Prot
Match: P22738 (60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4)

HSP 1 Score: 695.3 bits (1793), Expect = 4.0e-199
Identity = 333/386 (86.27%), Postives = 365/386 (94.56%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD TKPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPPMV+VGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF +YSK++ET+EGKK IQ +LEK+KKY SVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGG IA+KVDYA   FEKQVPV+A+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK GQE+H+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKDITPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQ+LLKQTSR+A+EEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGR 387
           KFID +S  GHGRFQT+QEK KF+GR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]

BLAST of Chy3G052270 vs. ExPASy Swiss-Prot
Match: P17094 (60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5)

HSP 1 Score: 691.8 bits (1784), Expect = 4.4e-198
Identity = 330/387 (85.27%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD TKPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF  Y+KQY++++GKK IQ +LEK+KKYA+VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG+IAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY++GK G E+HTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKD+TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRL 388
           KFIDT+S FGHGRFQT+ EK +F+ R+
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Chy3G052270 vs. ExPASy Swiss-Prot
Match: P27659 (60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 545.0 bits (1403), Expect = 6.7e-154
Identity = 268/394 (68.02%), Postives = 329/394 (83.50%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR++RHRGKVK+FPKDDA+KP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           ++PGSK++KKE  E VTI+ETPPMV+VG+VGYV+TPRGLRT  TV+A+H+S+E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF KY K+++ D GKK +++    +KKY  VIR++AHTQ+ ++  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQM-RLLPLRQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG++A+K+D+A    E+QVPV  VF +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIG-----KTGQ-E 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYKIG     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 SHTAITEFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVA 360
            + A T++D ++K I P+GGF HYG V +D++M+KG  VG KKRV+TLR+SLL QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 LEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLK 389
           LE+I LKFIDT+SKFGHGRFQT +EK+ F G LK
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]

BLAST of Chy3G052270 vs. ExPASy Swiss-Prot
Match: P21531 (60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 543.1 bits (1398), Expect = 2.5e-153
Identity = 267/394 (67.77%), Postives = 328/394 (83.25%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR++RHRGKVK+FPKDD +KP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           ++PGSK++KKE  E VTI+ETPPMV+VG+VGYV+TPRGLRT  TV+A+H+S+E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF KY K+++ D GKK +++    +KKY  VIR++AHTQ+ ++  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQM-RLLPLRQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG++A+K+D+A    E+QVPV  VF +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIG-----KTGQ-E 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYKIG     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 SHTAITEFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVA 360
            + A T++D ++K I P+GGF HYG V +D++M+KG  VG KKRV+TLR+SLL QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 LEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLK 389
           LE+I LKFIDT+SKFGHGRFQT +EK+ F G LK
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]

BLAST of Chy3G052270 vs. ExPASy TrEMBL
Match: A0A5A7SYQ0 (60S ribosomal protein L3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00600 PE=3 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 8.3e-224
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKFFGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]

BLAST of Chy3G052270 vs. ExPASy TrEMBL
Match: A0A1S3CIE8 (60S ribosomal protein L3 OS=Cucumis melo OX=3656 GN=LOC103501323 PE=3 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 8.3e-224
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKFFGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]

BLAST of Chy3G052270 vs. ExPASy TrEMBL
Match: A0A0A0KAJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014790 PE=3 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.1e-223
Identity = 388/389 (99.74%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKIGKTGQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKFFGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]

BLAST of Chy3G052270 vs. ExPASy TrEMBL
Match: A0A6J1F1X0 (60S ribosomal protein L3 OS=Cucurbita moschata OX=3662 GN=LOC111438907 PE=3 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 1.6e-219
Identity = 377/389 (96.92%), Postives = 388/389 (99.74%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYETDEGKK+IQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGG+IAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY++GKTGQE+HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKF+GR+KA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of Chy3G052270 vs. ExPASy TrEMBL
Match: A0A6J1IA92 (60S ribosomal protein L3 OS=Cucurbita maxima OX=3661 GN=LOC111472643 PE=3 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 2.8e-219
Identity = 377/389 (96.92%), Postives = 387/389 (99.49%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYE+DEGKKTIQEKLEKLKKY++VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY++GKTGQE+HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 390
           KFIDTSSKFGHGRFQTTQEKQKF+GR+KA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of Chy3G052270 vs. NCBI nr
Match: XP_008463090.1 (PREDICTED: 60S ribosomal protein L3 [Cucumis melo] >KAA0035026.1 60S ribosomal protein L3 [Cucumis melo var. makuwa] >TYK02359.1 60S ribosomal protein L3 [Cucumis melo var. makuwa])

HSP 1 Score: 778 bits (2010), Expect = 6.14e-284
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
           KFIDTSSKFGHGRFQTTQEKQKFFGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]

BLAST of Chy3G052270 vs. NCBI nr
Match: XP_011656458.1 (60S ribosomal protein L3 [Cucumis sativus] >KGN45859.1 hypothetical protein Csa_005287 [Cucumis sativus])

HSP 1 Score: 778 bits (2009), Expect = 8.73e-284
Identity = 388/389 (99.74%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKIGKTGQESHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
           KFIDTSSKFGHGRFQTTQEKQKFFGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]

BLAST of Chy3G052270 vs. NCBI nr
Match: XP_038885416.1 (60S ribosomal protein L3 [Benincasa hispida])

HSP 1 Score: 768 bits (1983), Expect = 8.02e-280
Identity = 381/389 (97.94%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKK+AF+KYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKRAFSKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESH+AIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHSAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKDITP+GGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
           KFIDTSSKFGHGRFQTTQEKQKF+GR+KA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of Chy3G052270 vs. NCBI nr
Match: XP_022932508.1 (60S ribosomal protein L3 [Cucurbita moschata] >XP_023525120.1 60S ribosomal protein L3 [Cucurbita pepo subsp. pepo] >KAG7037195.1 60S ribosomal protein L3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 764 bits (1973), Expect = 2.68e-278
Identity = 377/389 (96.92%), Postives = 388/389 (99.74%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYETDEGKK+IQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGG+IAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY++GKTGQE+HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
           KFIDTSSKFGHGRFQTTQEKQKF+GR+KA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of Chy3G052270 vs. NCBI nr
Match: XP_022932821.1 (60S ribosomal protein L3 [Cucurbita moschata] >XP_022932822.1 60S ribosomal protein L3 [Cucurbita moschata] >XP_022974021.1 60S ribosomal protein L3 [Cucurbita maxima] >XP_022974022.1 60S ribosomal protein L3 [Cucurbita maxima] >KAG6592264.1 60S ribosomal protein L3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025107.1 60S ribosomal protein L3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 763 bits (1971), Expect = 5.41e-278
Identity = 377/389 (96.92%), Postives = 387/389 (99.49%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYE+DEGKKTIQEKLEKLKKY++VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY++GKTGQE+HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
           KFIDTSSKFGHGRFQTTQEKQKF+GR+KA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of Chy3G052270 vs. TAIR 10
Match: AT1G61580.1 (R-protein L3 B )

HSP 1 Score: 695.3 bits (1793), Expect = 2.8e-200
Identity = 333/386 (86.27%), Postives = 365/386 (94.56%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD TKPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPPMV+VGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF +YSK++ET+EGKK IQ +LEK+KKY SVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGG IA+KVDYA   FEKQVPV+A+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK GQE+H+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKDITPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQ+LLKQTSR+A+EEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGR 387
           KFID +S  GHGRFQT+QEK KF+GR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]

BLAST of Chy3G052270 vs. TAIR 10
Match: AT1G43170.1 (ribosomal protein 1 )

HSP 1 Score: 691.8 bits (1784), Expect = 3.1e-199
Identity = 330/387 (85.27%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD TKPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF  Y+KQY++++GKK IQ +LEK+KKYA+VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG+IAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY++GK G E+HTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKD+TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRL 388
           KFIDT+S FGHGRFQT+ EK +F+ R+
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Chy3G052270 vs. TAIR 10
Match: AT1G43170.2 (ribosomal protein 1 )

HSP 1 Score: 691.8 bits (1784), Expect = 3.1e-199
Identity = 330/387 (85.27%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD TKPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF  Y+KQY++++GKK IQ +LEK+KKYA+VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG+IAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY++GK G E+HTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKD+TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRL 388
           KFIDT+S FGHGRFQT+ EK +F+ R+
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Chy3G052270 vs. TAIR 10
Match: AT1G43170.3 (ribosomal protein 1 )

HSP 1 Score: 691.8 bits (1784), Expect = 3.1e-199
Identity = 330/387 (85.27%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD TKPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF  Y+KQY++++GKK IQ +LEK+KKYA+VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG+IAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY++GK G E+HTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKD+TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRL 388
           KFIDT+S FGHGRFQT+ EK +F+ R+
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Chy3G052270 vs. TAIR 10
Match: AT1G43170.5 (ribosomal protein 1 )

HSP 1 Score: 691.8 bits (1784), Expect = 3.1e-199
Identity = 330/387 (85.27%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD TKPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAF  Y+KQY++++GKK IQ +LEK+KKYA+VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG+IAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY++GK G E+HTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEKD+TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRL 388
           KFIDT+S FGHGRFQT+ EK +F+ R+
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

The following BLAST results are available for this feature:

BLAST of Chy3G052270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35684	2.7e-203	86.63	60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 S...	[more]
P22738	4.0e-199	86.27	60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4	[more]
P17094	4.4e-198	85.27	60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5	[more]
P27659	6.7e-154	68.02	60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3	[more]
P21531	2.5e-153	67.77	60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3	[more]

BLAST of Chy3G052270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYQ0	8.3e-224	100.00	60S ribosomal protein L3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CIE8	8.3e-224	100.00	60S ribosomal protein L3 OS=Cucumis melo OX=3656 GN=LOC103501323 PE=3 SV=1	[more]
A0A0A0KAJ9	1.1e-223	99.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014790 PE=3 SV=1	[more]
A0A6J1F1X0	1.6e-219	96.92	60S ribosomal protein L3 OS=Cucurbita moschata OX=3662 GN=LOC111438907 PE=3 SV=1	[more]
A0A6J1IA92	2.8e-219	96.92	60S ribosomal protein L3 OS=Cucurbita maxima OX=3661 GN=LOC111472643 PE=3 SV=1	[more]

BLAST of Chy3G052270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463090.1	6.14e-284	100.00	PREDICTED: 60S ribosomal protein L3 [Cucumis melo] >KAA0035026.1 60S ribosomal p...	[more]
XP_011656458.1	8.73e-284	99.74	60S ribosomal protein L3 [Cucumis sativus] >KGN45859.1 hypothetical protein Csa_...	[more]
XP_038885416.1	8.02e-280	97.94	60S ribosomal protein L3 [Benincasa hispida]	[more]
XP_022932508.1	2.68e-278	96.92	60S ribosomal protein L3 [Cucurbita moschata] >XP_023525120.1 60S ribosomal prot...	[more]
XP_022932821.1	5.41e-278	96.92	60S ribosomal protein L3 [Cucurbita moschata] >XP_022932822.1 60S ribosomal prot...	[more]

BLAST of Chy3G052270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61580.1	2.8e-200	86.27	R-protein L3 B	[more]
AT1G43170.1	3.1e-199	85.27	ribosomal protein 1	[more]
AT1G43170.2	3.1e-199	85.27	ribosomal protein 1	[more]
AT1G43170.3	3.1e-199	85.27	ribosomal protein 1	[more]
AT1G43170.5	3.1e-199	85.27	ribosomal protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1430.10		coord: 83..207 e-value: 1.5E-208 score: 694.3
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 44..385 e-value: 1.5E-208 score: 694.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR11363:SF13	60S RIBOSOMAL PROTEIN L3-1	coord: 1..389
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 1..370 e-value: 1.4E-191 score: 636.3
IPR044892	Ribosomal protein L3, domain 3, archaeal type superfamily	GENE3D	4.10.960.10	Ribosomal protein L3, domain 3	coord: 1..274 e-value: 1.5E-208 score: 694.3
IPR045077	Ribosomal protein L3, archaeal/eukaryotic type	PANTHER	PTHR11363	60S RIBOSOMAL PROTEIN L3-RELATED	coord: 1..389
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 212..235
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 4..370

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G052270.1	Chy3G052270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome