Chy3G051980 (gene) Cucumber (hystrix) v1

Overview
NameChy3G051980
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTPRXL protein
LocationchrH03: 2047643 .. 2048744 (-)
RNA-Seq ExpressionChy3G051980
SyntenyChy3G051980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTCTCCTAGCTACTTCATATAGCATCCAATTCCTTTTCCCTCCAATTGTCATTATTATATATCAATCAAATTCATCTGCTTTGGATCTTGAAATCCGATTCTTAGATCTGTGGAAACAAAGAAAGAGAATCTCATTTTCATATATCAATTTTGGGCTTTCAAGATGAAAACTCAAAACTACGACCAAATCTCTCAAAAATCTTTCCAAATTACCAAACATGAAGGTAGATTCTTCACTAGAGCTCTATCCAAAGAGCTCAATTCCACCACCAACTCCTCTTTTCGAGTCTATTACGGCGGTGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCGGGAACTCCAAAGCATACTTTTTCAGACACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTTTTCCTCTTCACATTCTACTTCCAAAGCTTCTTCCAAACCAACCCTTTTGAGCTCAATTTTTCCTCGGCTTACACCGAGGAAATCTCGAACTTCCCCGTCTTTCTCCTCCTCTTCTGGCTCCCCCTCCTCGTCCTCTTCATTAGCTTCGTGGTCATCCTCTTTCTCATCCTCCTCCTCATCTCCCTCGCCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCGATTCTCGGATATTCCAAGCGTACCCTTTGAGTATAGCTTTGACGATAAAGACGGAGACGAGGTGGTGGCCGGGAGTGCTCCGAATTCTCCTACTTCAATTTTGTGCTTTGGTGGTGGTTCTTCAAGTAGAGCTACATTGTTTGGAGGTTGTTATCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGTAGAGGTACTCTTAATGATTAGTTGTGTGAATGAAATTAGTTAAATTCTCATAAGTTTTTTTTTTCCTTTTTGGGTTCAATCTTTCTCTCATTGTGTATTTGTGTTTGTGGAGTGAAATGTTATATTATATGGAACAGAAGTTCTTGAATTGATGTTTATTTGAGCTATTAGGGCTCAAATTAAACATTAAATTTCTTGAATGTGGCATATCTCATGTCAAATTATAACAAAAAAATCAAAACATTTTTAGTTTTTGTTT

mRNA sequence

GCTTCTCCTAGCTACTTCATATAGCATCCAATTCCTTTTCCCTCCAATTGTCATTATTATATATCAATCAAATTCATCTGCTTTGGATCTTGAAATCCGATTCTTAGATCTGTGGAAACAAAGAAAGAGAATCTCATTTTCATATATCAATTTTGGGCTTTCAAGATGAAAACTCAAAACTACGACCAAATCTCTCAAAAATCTTTCCAAATTACCAAACATGAAGGTAGATTCTTCACTAGAGCTCTATCCAAAGAGCTCAATTCCACCACCAACTCCTCTTTTCGAGTCTATTACGGCGGTGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCGGGAACTCCAAAGCATACTTTTTCAGACACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTTTTCCTCTTCACATTCTACTTCCAAAGCTTCTTCCAAACCAACCCTTTTGAGCTCAATTTTTCCTCGGCTTACACCGAGGAAATCTCGAACTTCCCCGTCTTTCTCCTCCTCTTCTGGCTCCCCCTCCTCGTCCTCTTCATTAGCTTCGTGGTCATCCTCTTTCTCATCCTCCTCCTCATCTCCCTCGCCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCGATTCTCGGATATTCCAAGCGTACCCTTTGAGTATAGCTTTGACGATAAAGACGGAGACGAGGTGGTGGCCGGGAGTGCTCCGAATTCTCCTACTTCAATTTTGTGCTTTGGTGGTGGTTCTTCAAGTAGAGCTACATTGTTTGGAGGTTGTTATCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGTAGAGGTACTCTTAATGATTAGTTGTGTGAATGAAATTAGTTAAATTCTCATAAGTTTTTTTTTTCCTTTTTGGGTTCAATCTTTCTCTCATTGTGTATTTGTGTTTGTGGAGTGAAATGTTATATTATATGGAACAGAAGTTCTTGAATTGATGTTTATTTGAGCTATTAGGGCTCAAATTAAACATTAAATTTCTTGAATGTGGCATATCTCATGTCAAATTATAACAAAAAAATCAAAACATTTTTAGTTTTTGTTT

Coding sequence (CDS)

GCTTCTCCTAGCTACTTCATATAGCATCCAATTCCTTTTCCCTCCAATTGTCATTATTATATATCAATCAAATTCATCTGCTTTGGATCTTGAAATCCGATTCTTAGATCTGTGGAAACAAAGAAAGAGAATCTCATTTTCATATATCAATTTTGGGCTTTCAAGATGAAAACTCAAAACTACGACCAAATCTCTCAAAAATCTTTCCAAATTACCAAACATGAAGGTAGATTCTTCACTAGAGCTCTATCCAAAGAGCTCAATTCCACCACCAACTCCTCTTTTCGAGTCTATTACGGCGGTGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCGGGAACTCCAAAGCATACTTTTTCAGACACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTTTTCCTCTTCACATTCTACTTCCAAAGCTTCTTCCAAACCAACCCTTTTGAGCTCAATTTTTCCTCGGCTTACACCGAGGAAATCTCGAACTTCCCCGTCTTTCTCCTCCTCTTCTGGCTCCCCCTCCTCGTCCTCTTCATTAGCTTCGTGGTCATCCTCTTTCTCATCCTCCTCCTCATCTCCCTCGCCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCGATTCTCGGATATTCCAAGCGTACCCTTTGAGTATAGCTTTGACGATAAAGACGGAGACGAGGTGGTGGCCGGGAGTGCTCCGAATTCTCCTACTTCAATTTTGTGCTTTGGTGGTGGTTCTTCAAGTAGAGCTACATTGTTTGGAGGTTGTTATCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGTAGAGGTACTCTTAATGATTAGTTGTGTGAATGAAATTAGTTAAATTCTCATAAGTTTTTTTTTTCCTTTTTGGGTTCAATCTTTCTCTCATTGTGTATTTGTGTTTGTGGAGTGAAATGTTATATTATATGGAACAGAAGTTCTTGAATTGATGTTTATTTGAGCTATTAGGGCTCAAATTAAACATTAAATTTCTTGAATGTGGCATATCTCATGTCAAATTATAACAAAAAAATCAAAACATTTTTAGTTTTTGTTT

Protein sequence

ASPSYFI*HPIPFPSNCHYYISIKFICFGS*NPILRSVETKKENLIFIYQFWAFKMKTQNYDQISQKSFQITKHEGRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSGSPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEVVAGSAPNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRGTLND*LCE*N*LNSHKFFFSFLGSIFLSLCICVCGVKCYIIWNRSS*IDVYLSY*GSN*TLNFLNVAYLMSNYNKKIKTFLVFVX
Homology
BLAST of Chy3G051980 vs. ExPASy TrEMBL
Match: A0A0A0K7T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 4.6e-115
Identity = 225/232 (96.98%), Postives = 229/232 (98.71%), Query Frame = 0

Query: 56  MKTQNYDQISQKSFQITKHEGRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 115
           MKTQ+YDQISQKSF ITKHE +FFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 116 TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 175
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 120

Query: 176 SPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEVVAG 235
           S SSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPS+PFEYSFDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 236 SAPNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRGTLND 288
           SAPNSPTSILCFGGGSSSRA+LFGGCYQLVSVKNALLSIVGHGSASRGTLND
Sbjct: 181 SAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLND 232

BLAST of Chy3G051980 vs. ExPASy TrEMBL
Match: A0A5A7UC51 (Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005080 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 6.2e-112
Identity = 223/233 (95.71%), Postives = 226/233 (97.00%), Query Frame = 0

Query: 56  MKTQNYDQISQKSFQITKHEGRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 115
           M+TQNYDQISQKS QITKHE RFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 116 TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 175
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRT PSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 176 SPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEVVAG 235
           S SSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRR FSDIPS+PFEYSFDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 236 S-APNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRGTLND 288
           S APNSPTSILCFGGGSSSRA+LFGGCYQLVSVK ALLSIVGHGSASRGTLND
Sbjct: 181 STAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233

BLAST of Chy3G051980 vs. ExPASy TrEMBL
Match: A0A1S4E178 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 6.2e-112
Identity = 223/233 (95.71%), Postives = 226/233 (97.00%), Query Frame = 0

Query: 56  MKTQNYDQISQKSFQITKHEGRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 115
           M+TQNYDQISQKS QITKHE RFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 116 TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 175
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRT PSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 176 SPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEVVAG 235
           S SSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRR FSDIPS+PFEYSFDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 236 S-APNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRGTLND 288
           S APNSPTSILCFGGGSSSRA+LFGGCYQLVSVK ALLSIVGHGSASRGTLND
Sbjct: 181 STAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233

BLAST of Chy3G051980 vs. ExPASy TrEMBL
Match: A0A6J1BX95 (Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.0e-74
Identity = 171/234 (73.08%), Postives = 187/234 (79.91%), Query Frame = 0

Query: 56  MKTQNYDQISQKSFQITKHEGRFFTR---ALSKELNSTTNSSFRVYYGGATGAIPFRWES 115
           M++ NYDQISQK  QI     RFFTR    LSKE NS  NSSFRVYYGGA+GAIPFRWES
Sbjct: 1   MQSANYDQISQKPLQIKHQNDRFFTRPAPVLSKEANSAANSSFRVYYGGASGAIPFRWES 60

Query: 116 RPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSS 175
           RPGTPKH++S+TSIPPLTPPPSY++SSHS SKASSKPTLLSSIFPRL PR+SR SP   S
Sbjct: 61  RPGTPKHSYSETSIPPLTPPPSYYTSSHSNSKASSKPTLLSSIFPRLAPRRSRNSP---S 120

Query: 176 SSGSPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEV 235
           S  S S SSS +SWSSS SSSSSSP    +  FFKRRR  SD PS+PFEYSFDD DGDE 
Sbjct: 121 SFSSASLSSSFSSWSSSRSSSSSSP----KLNFFKRRRSISDTPSLPFEYSFDDGDGDE- 180

Query: 236 VAGSAPNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRGTLN 287
             GS+ NSPTS LCFGG SSSRA+ F GCYQLVSVKNA LS+VGHGSA RGT+N
Sbjct: 181 -PGSS-NSPTSTLCFGGASSSRAS-FRGCYQLVSVKNAFLSMVGHGSAGRGTVN 223

BLAST of Chy3G051980 vs. ExPASy TrEMBL
Match: A0A6J1K022 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111489820 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.2e-68
Identity = 155/201 (77.11%), Postives = 165/201 (82.09%), Query Frame = 0

Query: 85  KELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSK 144
           KE NS  NSSFRVYYGGATGAIPFRWESRPGTPKHT+SDTSIPPLTPPPSY+SSSHSTSK
Sbjct: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSK 71

Query: 145 ASSKPTLLSSIFPRLTPRKSRTSPSFSSSSGSPSSSSSLASWSSSFSSSSSSPSPFVRPK 204
            S KPT  +SIF     RKSRT+ SFS SS S SSSSS  SW    SSS SSPS FVRPK
Sbjct: 72  PSPKPTRFTSIF-----RKSRTASSFSFSSSSSSSSSSFTSW----SSSRSSPSAFVRPK 131

Query: 205 FFKRRRRFSDIPSVPFEYSFDDKDGDEVVAGSAPNSPTSILCFGGGSSS-RATLFGGCYQ 264
           FFK RR FS+ PS+PFE SFDD +GDE V   +P+SPTS LCFGGGSSS RA+LF GCYQ
Sbjct: 132 FFKHRRCFSNSPSLPFECSFDDNEGDEAV--GSPDSPTSTLCFGGGSSSRRASLFRGCYQ 191

Query: 265 LVSVKNALLSIVGHGSASRGT 285
           LVSVKNALLSIVGHGSASRGT
Sbjct: 192 LVSVKNALLSIVGHGSASRGT 201

BLAST of Chy3G051980 vs. NCBI nr
Match: XP_011656432.1 (putative protein TPRXL [Cucumis sativus])

HSP 1 Score: 426 bits (1095), Expect = 1.81e-147
Identity = 225/232 (96.98%), Postives = 229/232 (98.71%), Query Frame = 0

Query: 56  MKTQNYDQISQKSFQITKHEGRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 115
           MKTQ+YDQISQKSF ITKHE +FFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 116 TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 175
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 120

Query: 176 SPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEVVAG 235
           S SSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPS+PFEYSFDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 236 SAPNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRGTLND 287
           SAPNSPTSILCFGGGSSSRA+LFGGCYQLVSVKNALLSIVGHGSASRGTLND
Sbjct: 181 SAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLND 232

BLAST of Chy3G051980 vs. NCBI nr
Match: KAE8646577.1 (hypothetical protein Csa_005771 [Cucumis sativus])

HSP 1 Score: 417 bits (1073), Expect = 5.36e-144
Identity = 221/228 (96.93%), Postives = 225/228 (98.68%), Query Frame = 0

Query: 56  MKTQNYDQISQKSFQITKHEGRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 115
           MKTQ+YDQISQKSF ITKHE +FFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 116 TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 175
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 120

Query: 176 SPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEVVAG 235
           S SSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPS+PFEYSFDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 236 SAPNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRG 283
           SAPNSPTSILCFGGGSSSRA+LFGGCYQLVSVKNALLSIVGHGSASRG
Sbjct: 181 SAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRG 228

BLAST of Chy3G051980 vs. NCBI nr
Match: XP_016901982.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052017.1 putative serine-rich protein [Cucumis melo var. makuwa])

HSP 1 Score: 416 bits (1068), Expect = 2.40e-143
Identity = 223/233 (95.71%), Postives = 226/233 (97.00%), Query Frame = 0

Query: 56  MKTQNYDQISQKSFQITKHEGRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 115
           M+TQNYDQISQKS QITKHE RFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 116 TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 175
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRT PSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 176 SPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEVVAG 235
           S SSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRR FSDIPS+PFEYSFDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 236 S-APNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRGTLND 287
           S APNSPTSILCFGGGSSSRA+LFGGCYQLVSVK ALLSIVGHGSASRGTLND
Sbjct: 181 STAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233

BLAST of Chy3G051980 vs. NCBI nr
Match: XP_038885974.1 (putative protein TPRXL [Benincasa hispida])

HSP 1 Score: 383 bits (983), Expect = 1.87e-130
Identity = 208/232 (89.66%), Postives = 215/232 (92.67%), Query Frame = 0

Query: 56  MKTQNYDQISQKSFQITKHEGRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 115
           M+TQNYDQISQKSFQ TKHE RFF RALSK+LNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSFQSTKHEDRFFNRALSKDLNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 116 TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 175
           TPKH FSDTSIPPLTPPPSY+SSSHSTSKASSKPTLLSSIFPRLTPRKSRTS SFSSSSG
Sbjct: 61  TPKHPFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSSSFSSSSG 120

Query: 176 SPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEVVAG 235
           S SSSSS ASWSSS SSSSSSPS FVRPKFFKRRRRFS+  S+PFEYSFDD D DEVV G
Sbjct: 121 S-SSSSSSASWSSSRSSSSSSPSAFVRPKFFKRRRRFSESSSLPFEYSFDDNDRDEVVTG 180

Query: 236 SAPNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRGTLND 287
           S PNSPTS LCFGG SSSRA+LFGGCYQLVSVKNALLSIVGHGSASRGTLN+
Sbjct: 181 STPNSPTSTLCFGGCSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLNN 231

BLAST of Chy3G051980 vs. NCBI nr
Match: XP_022134140.1 (putative protein TPRXL [Momordica charantia])

HSP 1 Score: 292 bits (747), Expect = 9.06e-95
Identity = 171/234 (73.08%), Postives = 187/234 (79.91%), Query Frame = 0

Query: 56  MKTQNYDQISQKSFQITKHEGRFFTR---ALSKELNSTTNSSFRVYYGGATGAIPFRWES 115
           M++ NYDQISQK  QI     RFFTR    LSKE NS  NSSFRVYYGGA+GAIPFRWES
Sbjct: 1   MQSANYDQISQKPLQIKHQNDRFFTRPAPVLSKEANSAANSSFRVYYGGASGAIPFRWES 60

Query: 116 RPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSS 175
           RPGTPKH++S+TSIPPLTPPPSY++SSHS SKASSKPTLLSSIFPRL PR+SR SPS   
Sbjct: 61  RPGTPKHSYSETSIPPLTPPPSYYTSSHSNSKASSKPTLLSSIFPRLAPRRSRNSPS--- 120

Query: 176 SSGSPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEV 235
           S  S S SSS +SWSSS SSSSSSP    +  FFKRRR  SD PS+PFEYSFDD DGDE 
Sbjct: 121 SFSSASLSSSFSSWSSSRSSSSSSP----KLNFFKRRRSISDTPSLPFEYSFDDGDGDE- 180

Query: 236 VAGSAPNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRGTLN 286
             GS+ NSPTS LCFGG SSSRA+ F GCYQLVSVKNA LS+VGHGSA RGT+N
Sbjct: 181 -PGSS-NSPTSTLCFGGASSSRAS-FRGCYQLVSVKNAFLSMVGHGSAGRGTVN 223

BLAST of Chy3G051980 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 5.7e-17
Identity = 83/210 (39.52%), Postives = 114/210 (54.29%), Query Frame = 0

Query: 76  GRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHT-FSDT-SIPPLTPPP 135
           G   ++ + KE +   +SS   YYGGA  ++PF WE+RPGTPKH  FS++  +PPLTPPP
Sbjct: 11  GVISSKIIVKESSQVNSSSRIYYYGGA--SVPFLWETRPGTPKHALFSESLRLPPLTPPP 70

Query: 136 SYFSSSHST-SKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSGSPSSSSSLASWSSSFSS 195
           SY+SSS S+ +K S   T+  + F +    +  + PSFS SS S SSSSS         S
Sbjct: 71  SYYSSSSSSGNKLSKARTIKQTRFVKTLLSRHVSRPSFSWSSASSSSSSSY--------S 130

Query: 196 SSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEVVAGSAPNSPTSILCFGGGSS 255
           SSS PS        K   R     S    Y  +D D +E+V+    +SPTS LC+  G S
Sbjct: 131 SSSPPS--------KVEHRPRKCYSCSRSYVKED-DEEEIVS----SSPTSTLCYKRGFS 188

Query: 256 SRATLFGGCYQLVSVKNALLSIVGHGSASR 283
           S          + S+K AL S++ HGS+ +
Sbjct: 191 S---------SMGSMKRALCSVLSHGSSRK 188

BLAST of Chy3G051980 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 8.0e-11
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0

Query: 94  SFRV-YYGGATGAIPFRWESRPGTPKHTFSD-TSIPPLTPPPSYFSSSHSTSKASSK 149
           SFR+ YY GA GA+PF WES PGTPKH  S+  ++PPLTPPPS+FS S    +  SK
Sbjct: 62  SFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRRSK 118

BLAST of Chy3G051980 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). )

HSP 1 Score: 62.8 bits (151), Expect = 6.8e-10
Identity = 76/179 (42.46%), Postives = 91/179 (50.84%), Query Frame = 0

Query: 98  YYGGATGAIPFRWESRPGTPK-HTFSDTSIP-PLTPPPSYFSSS-HSTSKASSKPTLLSS 157
           YYGGA  +IPF WESRPGTPK H  SD+S+P PLTPPPSY+SS   ST +  SK     S
Sbjct: 18  YYGGA--SIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSGILSTPRTQSKVRSKLS 77

Query: 158 IFPRLTPRKSRTSPSFSSSSGSPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSD 217
            F       S  S    S+ GS  ++SS  SWSS+ SSSS S SP   P   K  +R S 
Sbjct: 78  KFLSF----SMFSDLRRSNHGSKKTASSSFSWSSTSSSSSFSSSP---PHSLK--KRMSH 137

Query: 218 IPSVPFEYSFDDKDGDEVVAGSAPNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLS 274
               P  Y+  ++D          +SPTS LC   G        G    + SV  AL S
Sbjct: 138 DKKSPLLYANYEED-------ELRSSPTSTLCCSNGGR-----LGCSSSMGSVTRALFS 173

BLAST of Chy3G051980 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 3.7e-08
Identity = 54/128 (42.19%), Postives = 73/128 (57.03%), Query Frame = 0

Query: 98  YYGGATGAIPFRWESRPGTPK-----------HTFSDTSIP---PLTPPPSYFSSSHSTS 157
           YYGG++ A+PF+WES+PGTP+           ++ SD + P   PLTPPPSYF +S S++
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYASPSST 83

Query: 158 KASSKPTLLSSIFPRLTPRKSRTSPSFSSSSGSPSSSSSLASWSSSFSSSSSSPSPFVRP 212
           K  S P   +++F  L   K+R+ PS      SP+SSSS        SSSSS PS  +R 
Sbjct: 84  KHVS-PKKTNTLFSSLL-SKNRSVPS------SPASSSS--------SSSSSVPSSPLRT 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K7T84.6e-11596.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1[more]
A0A5A7UC516.2e-11295.71Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A1S4E1786.2e-11295.71Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1[more]
A0A6J1BX951.0e-7473.08Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1[more]
A0A6J1K0223.2e-6877.11uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=... [more]
Match NameE-valueIdentityDescription
XP_011656432.11.81e-14796.98putative protein TPRXL [Cucumis sativus][more]
KAE8646577.15.36e-14496.93hypothetical protein Csa_005771 [Cucumis sativus][more]
XP_016901982.12.40e-14395.71PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052... [more]
XP_038885974.11.87e-13089.66putative protein TPRXL [Benincasa hispida][more]
XP_022134140.19.06e-9573.08putative protein TPRXL [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT2G40475.15.7e-1739.52unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G01790.18.0e-1159.65unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G56260.26.8e-1042.46unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G06930.13.7e-0842.19unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..179
NoneNo IPR availablePANTHERPTHR33257:SF24EXPRESSED PROTEINcoord: 54..261
NoneNo IPR availablePANTHERPTHR33257OS05G0165500 PROTEINcoord: 54..261

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G051980.1Chy3G051980.1mRNA