Chy3G051850 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTTGTTACTCAAAGAAACTCTTCTTCTTCCGTTTCCATGTTGAATCCCAACGCTCCCTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCGTTTGGTGAAAATGAAGAATTCGTCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACGTAAGAAACGAAATCGAGTCATCGAGTCAGTCTATTTCTTTTCCTTCTCTTAATCGAGCTTCCTAATTTGTTGTTTCTTTTGTTTTCTTCTTCAGAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAGATTTCACGCGCTTAATCGAGTACGTTTCTTCATCAGAACTCAAGAACCAGTTTGAATTGTTGTTGATCTAGGGTTTTCCATTTCCTTTTTTTTTTTTTAATGTACAGAGTCTAGAACTTGATCTGTTACAAATTAACTCTGATGAATCTGTGTTTAGTTCTTGTAAATTTGAACCAAGTCTTACTTTCGATTATGATAAAATAAAAAAGAGTTTCAAAATTCTCAACAAAGTAGATCCATCCATCGCTAACAACTTCAGAATTCGAATTCTTATTCTCTTCTCTAATCTTGATAATCGCCAAAATCCTCTAGTAATTAATGTTGTTCAGTTCATCATCTTGCCATGGAATTGCAGTTTTTCTAATTTTCTGAAGAACTTTGATAACTTCTTCGTTAGTGACATTACCTGTAACAATCACTTTGTTCATCTCCATATCTACATTATATGTTTCTATATCTGCAAATAGAGAAGAAAAGAAAGGAAAATAAACCCCAAATGAATTACTTAACCATAGGAGGCTCTGACAAAGACATTGAAAACACAAACCTTGGATTTTCTTGATGGCTTTGAGAATCTTCTTGATACACTCCTCACAATGCAAAAAGACCTTCAATTCCACCACCTATGGCCAGAAAAACAACACCCATTAGAACCCATAAGAAATCAAATTCCAAGAAATTTCTCTTAGAAATACTTGCATTAGCCATTCTGTGACTGATCAATTCCTGATTTCAAGTGCAAAAATCTGAAGAGTGTTGAGGAAATAAAATGGTATTTGTTATCCTTCAAGAAAAGGAAGTGTTTTGATTAAGTAAAGAATTTATGTATGTTGATAGAGGAAAAGTAAGACGAAGGAATTGGATTCTTCATTTGGTGGATTGTTGGATGCAATTTTCAGCTCAAAAAGGTGAGATTCTTGATTTAGGAAGAATAGAATGTTGTGTGGAAATATCATCAATTTTTACTTGGCTAAGCTTTTCTTTTTCTTTTGGGGATATGGCCATTTTCTGAATTCTGTCCCCCACATTGCACTTTCGGTATCCACTCCCCTCTTTTGTCGTTAACATGACCCACTTTCTCAGCAAATATCTTTCACTTTTTCTTTTGTTATTATTTCAATTATATAAAGTCACACACTATCATAAATTCTTAATTTTTTAAGATAAGATTATGTAATATTATTTTGTTTTTTATTTGCAAAAGATTCTAATTTCTTATTCTTCTTTTTATTTATATAATTGAAATGTTGACGTGTTTGTCTGATACTTTGTGTTGGAAAAGGTGGGCTTGTATGGCCCTGGACGTGGTTTGTCACAAAAGGCACATGAATCTTCTAGGCCCATTTTAATATTGGTTCGGCCCACTTATGTTGAACAGAAATGA ATGGATGTTGTTACTCAAAGAAACTCTTCTTCTTCCGTTTCCATGTTGAATCCCAACGCTCCCTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCGTTTGGTGAAAATGAAGAATTCGTCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAAGTCTAGAACTTGATCTGTTACAAATTAACTCTGATGAATCTGTGTTTAGTTCTTGTAAATTTGAACCAAGTCTTACTTTCGATTATGATAAAATAAAAAAGAGTTTCAAAATTCTCAACAAAGTAGATCCATCCATCGCTAACAACTTCAGAATTCGAATTCTTATTCTCTTCTCTAATCTTGATAATCGCCAAAATCCTCTAGTGGGCTTGTATGGCCCTGGACGTGGTTTGTCACAAAAGGCACATGAATCTTCTAGGCCCATTTTAATATTGGTTCGGCCCACTTATGTTGAACAGAAATGA ATGGATGTTGTTACTCAAAGAAACTCTTCTTCTTCCGTTTCCATGTTGAATCCCAACGCTCCCTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCGTTTGGTGAAAATGAAGAATTCGTCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGAGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAAGTCTAGAACTTGATCTGTTACAAATTAACTCTGATGAATCTGTGTTTAGTTCTTGTAAATTTGAACCAAGTCTTACTTTCGATTATGATAAAATAAAAAAGAGTTTCAAAATTCTCAACAAAGTAGATCCATCCATCGCTAACAACTTCAGAATTCGAATTCTTATTCTCTTCTCTAATCTTGATAATCGCCAAAATCCTCTAGTGGGCTTGTATGGCCCTGGACGTGGTTTGTCACAAAAGGCACATGAATCTTCTAGGCCCATTTTAATATTGGTTCGGCCCACTTATGTTGAACAGAAATGA MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYAQKAPKIVNVKSLELDLLQINSDESVFSSCKFEPSLTFDYDKIKKSFKILNKVDPSIANNFRIRILILFSNLDNRQNPLVGLYGPGRGLSQKAHESSRPILILVRPTYVEQK* Homology
BLAST of Chy3G051850 vs. ExPASy Swiss-Prot
Match: I1JIC4 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26 Identity = 61/120 (50.83%), Postives = 81/120 (67.50%), Query Frame = 0
BLAST of Chy3G051850 vs. ExPASy Swiss-Prot
Match: Q39096 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.8e-11 Identity = 47/139 (33.81%), Postives = 65/139 (46.76%), Query Frame = 0
BLAST of Chy3G051850 vs. ExPASy Swiss-Prot
Match: Q94AR4 (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09 Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 0
BLAST of Chy3G051850 vs. ExPASy TrEMBL
Match: Q6ELF9 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 1.3e-67 Identity = 130/133 (97.74%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of Chy3G051850 vs. ExPASy TrEMBL
Match: A0A0A0KBP8 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 GN=Csa_6G013350 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.7e-67 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Chy3G051850 vs. ExPASy TrEMBL
Match: A0A5D3BZS0 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001350 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 5.0e-67 Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of Chy3G051850 vs. ExPASy TrEMBL
Match: A0A6J1JQA7 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111488890 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 8.6e-59 Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of Chy3G051850 vs. ExPASy TrEMBL
Match: A0A6J1JP33 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111487067 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 1.5e-58 Identity = 113/130 (86.92%), Postives = 119/130 (91.54%), Query Frame = 0
BLAST of Chy3G051850 vs. NCBI nr
Match: NP_001295813.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus] >AAQ18141.1 poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus]) HSP 1 Score: 265 bits (678), Expect = 1.25e-87 Identity = 130/133 (97.74%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of Chy3G051850 vs. NCBI nr
Match: KGN45812.1 (hypothetical protein Csa_005499 [Cucumis sativus]) HSP 1 Score: 265 bits (677), Expect = 1.72e-87 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Chy3G051850 vs. NCBI nr
Match: KAA0052043.1 (Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis melo var. makuwa] >TYK04518.1 Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis melo var. makuwa]) HSP 1 Score: 263 bits (673), Expect = 6.99e-87 Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of Chy3G051850 vs. NCBI nr
Match: XP_038884078.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Benincasa hispida]) HSP 1 Score: 254 bits (649), Expect = 3.14e-83 Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0
BLAST of Chy3G051850 vs. NCBI nr
Match: KAG6602602.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 238 bits (608), Expect = 5.40e-77 Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of Chy3G051850 vs. TAIR 10
Match: AT2G41430.3 (dehydration-induced protein (ERD15) ) HSP 1 Score: 70.5 bits (171), Expect = 2.0e-12 Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of Chy3G051850 vs. TAIR 10
Match: AT2G41430.1 (dehydration-induced protein (ERD15) ) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-12 Identity = 47/139 (33.81%), Postives = 65/139 (46.76%), Query Frame = 0
BLAST of Chy3G051850 vs. TAIR 10
Match: AT2G41430.4 (dehydration-induced protein (ERD15) ) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-12 Identity = 47/139 (33.81%), Postives = 65/139 (46.76%), Query Frame = 0
BLAST of Chy3G051850 vs. TAIR 10
Match: AT2G41430.2 (dehydration-induced protein (ERD15) ) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-12 Identity = 47/139 (33.81%), Postives = 65/139 (46.76%), Query Frame = 0
BLAST of Chy3G051850 vs. TAIR 10
Match: AT2G41430.5 (dehydration-induced protein (ERD15) ) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-12 Identity = 47/139 (33.81%), Postives = 65/139 (46.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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