Chy3G051660 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G051660
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DNA replication complex GINS protein PSF3-like
Location	chrH03: 1706954 .. 1711300 (+)
RNA-Seq Expression	Chy3G051660
Synteny	Chy3G051660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACTTTGAACCCTCTCGAACTCTATTGAAGTATATTAGATTAGTCTTCAATCTGTGGGTATTTTTTGTTTGTGGTTCTGGACGAATTTGAGATGGTCGATTGAGGTTTACGGTTGATTTTGGATTTGAATATCTCTCTTGAACAGTCTTTCAATTATGGTTACTGTTATTTATCCGAGTTCTAGCCTCTAAACCTTGTCTTTATTGTTTAGGCTTCTGAAAGTTGACGTTTGTTCAAGGAATTGAATTTTTGGATTGAGAATGGTTGGTCGTTGATCGTGGTAAGTAGTCTCCACATATTTTCCGGAAGATAAATTTTGGTTTAATTATGTTTTGAGAATTGCGATTAGACAAATGTTTGGAAGTGGTTTTGTATGATTTGAAATTCATCGAATTTAATTTGTATGCTTTAACTGTTTTACTATTTGAAAGCATGTTTGTCATTTTGGATAAGTTGAAATAAAAGCGTTTCCATTGATTTCCGAATTTAAAGTAAGTTTGTTTTTTACCTTTTGGTTTTGATATATATGATATGAAAGTTATTGAAAAGTTTGAAAGGTTGATTTTTTGAAATTGTTGTTTGAAATTACATGTTATGTTTCAAATTTTTATGATTTTTTTTATCAATTCAGTAAGGACTATTGCATATACCAAACTTTGTTTTGGGATCGTATGCTCATTCTGTAGCAGCCAAGTTTGGGATAGATGGTAAATGATTTGATTGAAGCTTATTTGTAGGAAGGCACTTTATTGTGGTTTGGCATTCCTTTGTATTTAATATTTCAGTAGTTGTATTGAATGCTCTGGTTGATTGTGTTGAATTGAATATTCTGGTCGATTTTTAATTGACATAATCTGATTGAACGACTAGAGGATTGGTGTAACAAACAGGTAACCACACTTGTCTGGGCTACTCCAATTATGCATATTTACCACTCTCTTAAATGAAAGAATTGATTGATTGAAAGCTATGCTAAGTGAAGTATTGATCAATTGGAAGTTTTGTCTGATTGAAAGTACTGATCGATTGAATGTTTTTATTTGTTAAAAGTAATGAAAAATTTGTTCTATTAAAGTCTATTTGAACTTTTTTCTAGCGAAAGTTGTAAGTTTATTTGGAAGTTTTAGTCTAAACATTTGGTTTTGAAAGCTTTAGTTTGAAACGTTCAGTTTAGGAAAGTTAACTAATTGAAAGATTTTGGCTTTGATCGTAACAAAGTTTTTATTTGAAAGCTTTTCAAGGATTTGTATTTTTGGCTTGCATGAAAGAAAATAAATCTCAAAGCCTGATGTGGGAATTCCTTATGGAACATTTTTGTTCTCATCTTTTGCTTTTTCTAAGTGTTTGCAAATGCAGGATCAGTGGCTTGTTCTGGAAGAAGTAAAGTATTTTGGCACAAGGCACCGGAAGATTTATTTTGATAAATATTTTATTATTTTTAAATGTTTGAATTTGATAATTTATCTTAGAAATTGTTTGCAATTAATTGCTTTTGCCGAGTAATGTAAGTTGTTATAGTCTGCATTTTGGAAAGTACAATCTGTTACACACTTACCATTTGATTTTTGAACATTGTGTTTGTTTTCTCTCCATTTTTCTTAGAATGATGCTCATCTTTGTAACATTCAAATTTTTAGTCAAATTTCAAAAACAAAAACAAGTTTTATGAACTATTTTTTTTAGTTTTCAAAACTTAGCATGGATTTTGTTGCAAAACAAAGAAACTCATTGGCGGAAGTAGTGGATATAAGCTTAATTTTCAAAAACCAAAGGGTTGATAATTTGAGGGTAAACTGCCATTACATTTCTGGCAGTTCCAACTAAATATTTAATGTAGAAGTACTTGGTGATGGTTGTAAATAATATATTAATTTGGAAGTTTGAGTAAATCTCTTGCAGAGGTATTGAACATTGGATTGGAGGACGTGTTGAATGCTCTCAGAAATGACAAGTTATTATGATATTGATGACATTCTTGCAGAGGAAGAGGTCAATATCTTATCCTTTTACCTAATAAAGTTTAATCAACTTGCAAAATCAATATTGAGTCTTTGTCTTGACAGCTTGTCTCAGTTGTGTTCCAAAAGGCTGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTGAGTTCCAGAGATTAGTAGAGGTATGTTACGAATGTTGAATAAAAAACTTATATTTTCTTATTTGGTGTAATTTCAGGTTGAATCTGGATCCAAAGTAGAGCTACCCTTTTGGCTTGCACAAGAGCTGCATCTGAGACAAGTGGCAGTTATGGCCTTACCTTCCTGTTTTAACCAAAGGTAGCAATAGCCACTACATTTAAGCTCTACAACCAATAATTTCAGTAACTTCGGGTGTTTTGGAATTTTTTGGGAGCTTAAGAGGAGGATTTTATTTACTATGTCCCCATTTCCTAATAGCTGACACGAAAAGATACTGATTTTTTATTCTTTTTCCTCTAATTCTGTGATTGCATAATTCATTATTTATGTGTAATTGTGTTGTTTCCCATCTGGCTGGTGCGTAGGTCTCATGGATTGCATTTTTTTGGTCTGCTAATTATTTGAGGATGAACTTGTGAATTGGAATCCGTAGAGTACAGACATTAGTAAGATTTGATTTGGTCATTTTTAAAGTTAATCGTGTTATTATTTTTAACTTATTTTCATTACTCCTTTGGCTTGCTGATGAATCACATTTACATGGGAGACAAATGATGTTAATGGCCTTACCTTCCAATTTCATTTATCAAAACAAAAGTTATGGTTTTTTCTCCTTGATACTGTCCTGATGATCTGTTTTGGTCATGAAATTGTCGTATTCCAAACTTTTTGAGATTAGTTTATATAATCTCTTTTAGAATGCTCGCACTTGCTGCATAAGAGATCACGCCCAAAGAAAAGTTTTTTTTTTTTTTTGGTGTTTTCCAAACCTTCGTGTGGCTCAAATTTTCCATTTACTCACTACTTTACTACTAGTAGAAACTTCCTGCATTAGAATCTCATGATTAAAGGAATCAGTAAGACTCTGATGATGACATTTATTCTTATATATATTGAAAATATGATGATATTTGTAGCTGACCAGTGCTCTTGTTCTCTTACTAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGGTCTAGATGTCAATTCTTCTATGAATTTGGATGCAAGATTGCACCTTTGTGAGTATCCTGAGATCCAACACTTCATGATGTAAATCATGATTCTTTTATGAGAAGAAAATTTTATATTGCTGCCTTGCCTATTAATTTAGGTGAAGTCATACTTATGGCCATTGAAATTGAAAGCGTTTAAGTGCCCTTTCATTTGAAATACATTTGTACTCTAATAAGCATGACTTGTTTTCACCTTTGCCAGAAGTAGCCTTCTGGAGACATGGCATTTAAAAAATCATTTCTCAAACATAACAATTAGGTTATCTGGAGATGAGACTAGTTATTTACTGCAGTCTAATTGACTTATAAAACGATCTATTTAAACTTGTTTATTAAGCATGCTGGTTGGACATCCTACCAAGGATCTTGTATTTAGGCTTGACTGTGATCTGGCTAGCATGTTACCATCTCAAGTTTCGGATCTCAATGAATATCAATCTCAATTTCATTCCATTGTATATTTAGATTGATAAATATGCACAGAGATTTTAAACTATCTTGTAAGTAGCGCTTGTTGCCTTGGAGTGCATGTAGGATGTCTGTTTCGTTGGGGTGTGCTGTACCAAATTGCGGTTTGTAAGATTTGTTAAGTGTACCTAAATGGAAGAGAACACAGTAGATTGAAGATATCTCTCATTTTTCTTTCAAATATTATTTTGTATTATTAGTACAAACAACGGAGTACGAGGATTTGAACCTCCAAGCTCAAGAGTATAGATCAATTATAGTTGAGGTAGTTCATGCTGACTTATAAGTGGATTATTCTAACTTCTCAGTACAAACTTCATTGTCAGGGTTGGCGATAGAACAATCGGTTCTTGGCTTCTATCAACGTTCAAGAGTAGGTACAAGGAAGTTCTTACGAAGGCTCACAGTGCAGTATTTGCTGCAAGTTCAAAATATTTGGCACTTCTGGCAAAAGAAGAAACCAAAAGTGAGATATTTGTTAGATGTTTTGTGTCTCTTGTTTCCACATGTATTGATTCTCTTCAAACTCAAATCAATATAACAATCCATATTTTGTGCAGTGTATGAAGCAGCTCAATCCTCCATGACAGCCTTCAAGAAATGGAGAATGGGTGGACCTAGATTCCAGAGAGCATCCTTTCTAAGCAGGAAGAGGAAGTCAACTGAGTAG

mRNA sequence

ATGCACTTTGAACCCTCTCGAACTCTATTGAAGTATATTAGATTAGTCTTCAATCTGTGGCTTGTCTCAGTTGTGTTCCAAAAGGCTGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTTTGGCTTGCACAAGAGCTGCATCTGAGACAAGTGGCAGTTATGGCCTTACCTTCCTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGGTCTAGATGTCAATTCTTCTATGAATTTGGATGCAAGATTGCACCTTTGGTTGGCGATAGAACAATCGGTTCTTGGCTTCTATCAACGTTCAAGAGTAGGTACAAGGAAGTTCTTACGAAGGCTCACAGTGCAGTATTTGCTGCAAGTTCAAAATATTTGGCACTTCTGGCAAAAGAAGAAACCAAAATGTATGAAGCAGCTCAATCCTCCATGACAGCCTTCAAGAAATGGAGAATGGGTGGACCTAGATTCCAGAGAGCATCCTTTCTAAGCAGGAAGAGGAAGTCAACTGAGTAG

Coding sequence (CDS)

ATGCACTTTGAACCCTCTCGAACTCTATTGAAGTATATTAGATTAGTCTTCAATCTGTGGCTTGTCTCAGTTGTGTTCCAAAAGGCTGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTTTGGCTTGCACAAGAGCTGCATCTGAGACAAGTGGCAGTTATGGCCTTACCTTCCTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGGTCTAGATGTCAATTCTTCTATGAATTTGGATGCAAGATTGCACCTTTGGTTGGCGATAGAACAATCGGTTCTTGGCTTCTATCAACGTTCAAGAGTAGGTACAAGGAAGTTCTTACGAAGGCTCACAGTGCAGTATTTGCTGCAAGTTCAAAATATTTGGCACTTCTGGCAAAAGAAGAAACCAAAATGTATGAAGCAGCTCAATCCTCCATGACAGCCTTCAAGAAATGGAGAATGGGTGGACCTAGATTCCAGAGAGCATCCTTTCTAAGCAGGAAGAGGAAGTCAACTGAGTAG

Protein sequence

MHFEPSRTLLKYIRLVFNLWLVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAASSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE*

Homology

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BLAST of Chy3G051660 vs. ExPASy Swiss-Prot
Match: Q7ZT01 (DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-12
Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 0


Query: 35  IDPSSETDSVESGSKVELPFWLAQELH--LRQVAVMALPSCFNQRTRLEIQADAAFVDLR 94
           +D   ++DS+  GSK+ELP WLA+ L+   R+V  + LP  + +  R    ADA  VDL 
Sbjct: 45  LDKGGDSDSIPEGSKMELPLWLAKGLYDNKRRVLSVELPKIYREGWRTVFSADANVVDLH 104

Query: 95  SRCQFFYEFGCKIAPLVGDRT--IGSWLLSTFKSRYKEVLTKAHSAVFAASSKYLALLAK 154
                +Y FG ++          I   +L TF  R++ ++  + +A    +S  +A L +
Sbjct: 105 KMGPHYYGFGSQLLNFDSPENPEIAKTILQTFVGRFRRIMDSSQNAYNEDTSGLVARLDE 164

Query: 155 EETKMYEAAQSSMTAFKKWRMGGPRFQRASFL---SRKRKSTE 191
            E  ++ A Q  + AF+ W  G      AS L    +KRK  E
Sbjct: 165 LERSLFRAGQRGLNAFQSWERGKAAQITASNLVQNYKKRKFNE 207

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BLAST of Chy3G051660 vs. ExPASy Swiss-Prot
Match: Q0UPV4 (DNA replication complex GINS protein PSF3 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=PSF3 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.3e-11
Identity = 45/156 (28.85%), Postives = 74/156 (47.44%), Query Frame = 0


Query: 22  VSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQ------VAVMALPSCFN 81
           V   F+  V G+G    + +  ++ GSKVELP WL + L L Q      +  +  PS  +
Sbjct: 17  VPCTFELTVPGLGFLEGNMSGDMKQGSKVELPLWLGEMLALSQSLNTSSLVTLDPPSALS 76

Query: 82  QRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHS 141
            R    ++AD   VDLR+    FY+ G +I  L  +  +   L  TFK+R   +  +AH+
Sbjct: 77  PRVLNALKADPRTVDLRALAPHFYDLGARILELFEEEKMIEVLSDTFKARAAVIADQAHN 136

Query: 142 --AVFAASSKYLALLAKEETKMYEAAQSSMTAFKKW 170
                   + ++  L + E +++ AA  S  A + W
Sbjct: 137 PRGALGEGADFMRGLDENERQLFRAAHDSAKAARTW 172

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BLAST of Chy3G051660 vs. ExPASy Swiss-Prot
Match: Q9BRX5 (DNA replication complex GINS protein PSF3 OS=Homo sapiens OX=9606 GN=GINS3 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09
Identity = 49/160 (30.63%), Postives = 78/160 (48.75%), Query Frame = 0


Query: 39  SETD-SVESGSKVELPFWLAQEL--HLRQVAVMALPSCFNQRTRLEIQADAAFVDLRSRC 98
           +ETD +V  GSK+ELP WLA+ L  + R++  + LP  + +  R    AD   VDL    
Sbjct: 54  AETDNAVPQGSKLELPLWLAKGLFDNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMG 113

Query: 99  QFFYEFGCKIAPLVG--DRTIGSWLLSTFKSRYKEVLTKAHSAVFAASSKYLALLAKEET 158
             FY FG ++       +  I   LL TF  R++ ++  + +A    +S  +A L + E 
Sbjct: 114 PHFYGFGSQLLHFDSPENADISQSLLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMER 173

Query: 159 KMYEAAQSSMTAFKKWRMGGPRFQRASFL---SRKRKSTE 191
            +++  Q  +  F+ W  G      AS L    +KRK T+
Sbjct: 174 GLFQTGQKGLNDFQCWEKGQASQITASNLVQNYKKRKFTD 213

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BLAST of Chy3G051660 vs. ExPASy Swiss-Prot
Match: Q5RDV0 (DNA replication complex GINS protein PSF3 OS=Pongo abelii OX=9601 GN=GINS3 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09
Identity = 49/160 (30.63%), Postives = 79/160 (49.38%), Query Frame = 0


Query: 39  SETD-SVESGSKVELPFWLAQEL--HLRQVAVMALPSCFNQRTRLEIQADAAFVDLRSRC 98
           +ETD +V  GSK+ELP WLA+ L  + R++  + LP  + +  R    AD   VDL    
Sbjct: 54  AETDNAVPQGSKLELPLWLAKGLFDNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMG 113

Query: 99  QFFYEFGCKIAPLVG--DRTIGSWLLSTFKSRYKEVLTKAHSAVFAASSKYLALLAKEET 158
             FY FG ++       +  I   LL TF  R++ ++  + +A    +S  +A L + E 
Sbjct: 114 PHFYGFGSQLLHFDSPENADISQSLLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMER 173

Query: 159 KMYEAAQSSMTAFKKWRMGGPRFQRASFL---SRKRKSTE 191
            +++  Q+ +  F+ W  G      AS L    +KRK T+
Sbjct: 174 GLFQIGQNGLNDFQCWEKGQASQITASNLVQNYKKRKFTD 213

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BLAST of Chy3G051660 vs. ExPASy Swiss-Prot
Match: P0CQ33 (DNA replication complex GINS protein PSF3 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=PSF3 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.0e-06
Identity = 44/164 (26.83%), Postives = 72/164 (43.90%), Query Frame = 0


Query: 22  VSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRLE 81
           +S  F     G+G    S  + +  G+KVELPFWLAQ L + Q     LP  ++ R +  
Sbjct: 18  MSCTFALDAEGLGYLEGSTENDIHEGTKVELPFWLAQTLSVNQFTTFTLPLPYSSRVQSA 77

Query: 82  IQADAAFVDLRSRC---QFFYEFGCKIAPLVGDR---TIGSWLLSTFKSRYKEVLTKA-- 141
           + A    V L +      ++Y +G K+A ++ D     I + LL  F  R   +   A  
Sbjct: 78  LVASPVSVKLSNLVGGNGWWYRWGKKLADMLEDEQATNIRNMLLRAFTGRLPTLQDLAAH 137

Query: 142 -----HSAVFAASSK---YLALLAKEETKMYEAAQSSMTAFKKW 170
                H+    ++SK   +   +  +E +++   Q S   FK W
Sbjct: 138 HASADHTMPELSTSKAEMFRDGMEGDERELFSIGQDSGRLFKAW 181

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BLAST of Chy3G051660 vs. ExPASy TrEMBL
Match: A0A1S3B3H3 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103485572 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 21  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 80
           LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL
Sbjct: 16  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 75

Query: 81  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 140
           EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA
Sbjct: 76  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 135

Query: 141 SSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 191
           SSKYLALL+KEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE
Sbjct: 136 SSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 185

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BLAST of Chy3G051660 vs. ExPASy TrEMBL
Match: A0A5A7UGU7 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002360 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 21  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 80
           LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL
Sbjct: 38  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 97

Query: 81  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 140
           EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA
Sbjct: 98  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 157

Query: 141 SSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 191
           SSKYLALL+KEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE
Sbjct: 158 SSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 207

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BLAST of Chy3G051660 vs. ExPASy TrEMBL
Match: A0A0A0K8J6 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011640 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.0e-86
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 21  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 80
           LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL
Sbjct: 20  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 79

Query: 81  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 140
           EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLST KSRYKEVLTKAHSAVFAA
Sbjct: 80  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTLKSRYKEVLTKAHSAVFAA 139

Query: 141 SSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 191
           SSKYLALL+KEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE
Sbjct: 140 SSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 189

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BLAST of Chy3G051660 vs. ExPASy TrEMBL
Match: A0A6J1BYI2 (DNA replication complex GINS protein PSF3-like OS=Momordica charantia OX=3673 GN=LOC111006426 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.8e-81
Identity = 155/170 (91.18%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 21  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 80
           LVSVVFQK VNGVGIDPSSETDSVESGSKVELPFWL QELHLRQV  M LP+CFNQRTRL
Sbjct: 16  LVSVVFQKGVNGVGIDPSSETDSVESGSKVELPFWLGQELHLRQVVAMGLPACFNQRTRL 75

Query: 81  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 140
           EIQADAAFVDLRSRC +FYEFGCKIAPLVGDRTIGSWLLSTFK RYKEVLTKAHSA+FAA
Sbjct: 76  EIQADAAFVDLRSRCPYFYEFGCKIAPLVGDRTIGSWLLSTFKIRYKEVLTKAHSAIFAA 135

Query: 141 SSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 191
           SSKYLALL+KEET+MYEAAQSSMTAFKKWRMGGPRFQ+ASFL RKRKS+E
Sbjct: 136 SSKYLALLSKEETEMYEAAQSSMTAFKKWRMGGPRFQKASFLGRKRKSSE 185

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BLAST of Chy3G051660 vs. ExPASy TrEMBL
Match: A0A6J1HEE0 (DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462725 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.0e-81
Identity = 156/170 (91.76%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 21  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 80
           LVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLA+ELHLRQVAVM LP+CFNQRTRL
Sbjct: 16  LVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQVAVMGLPACFNQRTRL 75

Query: 81  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 140
           EIQADAAFVDLRSR Q+FYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAH+AVFAA
Sbjct: 76  EIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHTAVFAA 135

Query: 141 SSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 191
           SSKYL LL+KEETKMYEAAQSSMTAFKKWR+GGPRFQ+ASFL RKRKS+E
Sbjct: 136 SSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRKRKSSE 185

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BLAST of Chy3G051660 vs. NCBI nr
Match: XP_008441464.1 (PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008441465.1 PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo])

HSP 1 Score: 333 bits (853), Expect = 2.53e-114
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 21  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 80
           LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL
Sbjct: 16  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 75

Query: 81  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 140
           EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA
Sbjct: 76  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 135

Query: 141 SSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 190
           SSKYLALL+KEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE
Sbjct: 136 SSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 185

[Close]

BLAST of Chy3G051660 vs. NCBI nr
Match: KAA0055042.1 (DNA replication complex GINS protein PSF3-like [Cucumis melo var. makuwa] >TYK24435.1 DNA replication complex GINS protein PSF3-like [Cucumis melo var. makuwa])

HSP 1 Score: 333 bits (853), Expect = 5.47e-114
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 21  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 80
           LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL
Sbjct: 38  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 97

Query: 81  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 140
           EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA
Sbjct: 98  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 157

Query: 141 SSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 190
           SSKYLALL+KEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE
Sbjct: 158 SSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 207

[Close]

BLAST of Chy3G051660 vs. NCBI nr
Match: XP_004138422.1 (DNA replication complex GINS protein PSF3 isoform X1 [Cucumis sativus] >KGN45788.1 hypothetical protein Csa_005301 [Cucumis sativus])

HSP 1 Score: 330 bits (847), Expect = 2.39e-113
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 21  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 80
           LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL
Sbjct: 20  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 79

Query: 81  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 140
           EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLST KSRYKEVLTKAHSAVFAA
Sbjct: 80  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTLKSRYKEVLTKAHSAVFAA 139

Query: 141 SSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 190
           SSKYLALL+KEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE
Sbjct: 140 SSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 189

[Close]

BLAST of Chy3G051660 vs. NCBI nr
Match: XP_038885801.1 (DNA replication complex GINS protein PSF3-like [Benincasa hispida] >XP_038885802.1 DNA replication complex GINS protein PSF3-like [Benincasa hispida])

HSP 1 Score: 323 bits (828), Expect = 1.88e-110
Identity = 163/170 (95.88%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 21  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 80
           LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL
Sbjct: 20  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 79

Query: 81  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 140
           EIQADAAFVDLRSRC FFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAH+AVFAA
Sbjct: 80  EIQADAAFVDLRSRCPFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHTAVFAA 139

Query: 141 SSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 190
           SSKYL LL+ EETKMYEAAQSSMTAFKKWRMGGPRFQ+ASFLSRKRKS+E
Sbjct: 140 SSKYLTLLSNEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLSRKRKSSE 189

[Close]

BLAST of Chy3G051660 vs. NCBI nr
Match: XP_022134062.1 (DNA replication complex GINS protein PSF3-like [Momordica charantia])

HSP 1 Score: 312 bits (799), Expect = 4.29e-106
Identity = 155/170 (91.18%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 21  LVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRL 80
           LVSVVFQK VNGVGIDPSSETDSVESGSKVELPFWL QELHLRQV  M LP+CFNQRTRL
Sbjct: 16  LVSVVFQKGVNGVGIDPSSETDSVESGSKVELPFWLGQELHLRQVVAMGLPACFNQRTRL 75

Query: 81  EIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAA 140
           EIQADAAFVDLRSRC +FYEFGCKIAPLVGDRTIGSWLLSTFK RYKEVLTKAHSA+FAA
Sbjct: 76  EIQADAAFVDLRSRCPYFYEFGCKIAPLVGDRTIGSWLLSTFKIRYKEVLTKAHSAIFAA 135

Query: 141 SSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 190
           SSKYLALL+KEET+MYEAAQSSMTAFKKWRMGGPRFQ+ASFL RKRKS+E
Sbjct: 136 SSKYLALLSKEETEMYEAAQSSMTAFKKWRMGGPRFQKASFLGRKRKSSE 185

[Close]

BLAST of Chy3G051660 vs. TAIR 10
Match: AT1G19080.1 (GINS complex protein )

HSP 1 Score: 232.6 bits (592), Expect = 2.6e-61
Identity = 114/168 (67.86%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 22  VSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRLE 81
           V V+F K  NGV IDPS+ET+  E GSKVELPFWLA ELHLRQ   + LP CF+Q+TRLE
Sbjct: 17  VPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQAVTINLPPCFDQKTRLE 76

Query: 82  IQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAAS 141
           +QADAA+VDLRSRC +FYEFGCKI PLV DRT+G  L + FK RYKE LTK ++A    +
Sbjct: 77  VQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIRYKEALTKVYTAAHITA 136

Query: 142 SKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKST 190
           SKYL+ L KEET +YEAA  SMTAFKKWR GGPRFQRAS L RKRK +
Sbjct: 137 SKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRKRKDS 184

[Close]

BLAST of Chy3G051660 vs. TAIR 10
Match: AT1G19080.2 (GINS complex protein )

HSP 1 Score: 232.6 bits (592), Expect = 2.6e-61
Identity = 114/168 (67.86%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 22  VSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRLE 81
           V V+F K  NGV IDPS+ET+  E GSKVELPFWLA ELHLRQ   + LP CF+Q+TRLE
Sbjct: 17  VPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQAVTINLPPCFDQKTRLE 76

Query: 82  IQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAAS 141
           +QADAA+VDLRSRC +FYEFGCKI PLV DRT+G  L + FK RYKE LTK ++A    +
Sbjct: 77  VQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIRYKEALTKVYTAAHITA 136

Query: 142 SKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKST 190
           SKYL+ L KEET +YEAA  SMTAFKKWR GGPRFQRAS L RKRK +
Sbjct: 137 SKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRKRKDS 184

[Close]

BLAST of Chy3G051660 vs. TAIR 10
Match: AT3G55490.1 (GINS complex protein )

HSP 1 Score: 232.6 bits (592), Expect = 2.6e-61
Identity = 114/168 (67.86%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 22  VSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRLE 81
           V V+F K  NGV IDPS+ET+  E GSKVELPFWLA ELHLRQ   + LP CF+Q+TRLE
Sbjct: 17  VPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQAVTINLPPCFDQKTRLE 76

Query: 82  IQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAAS 141
           +QADAA+VDLRSRC +FYEFGCKI PLV DRT+G  L + FK RYKE LTK ++A    +
Sbjct: 77  VQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIRYKEALTKVYTAAHITA 136

Query: 142 SKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKST 190
           SKYL+ L KEET +YEAA  SMTAFKKWR GGPRFQRAS L RKRK +
Sbjct: 137 SKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRKRKDS 184

The following BLAST results are available for this feature:

BLAST of Chy3G051660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7ZT01	2.8e-12	30.67	DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=...	[more]
Q0UPV4	5.3e-11	28.85	DNA replication complex GINS protein PSF3 OS=Phaeosphaeria nodorum (strain SN15 ...	[more]
Q9BRX5	2.9e-09	30.63	DNA replication complex GINS protein PSF3 OS=Homo sapiens OX=9606 GN=GINS3 PE=1 ...	[more]
Q5RDV0	2.9e-09	30.63	DNA replication complex GINS protein PSF3 OS=Pongo abelii OX=9601 GN=GINS3 PE=2 ...	[more]
P0CQ33	3.0e-06	26.83	DNA replication complex GINS protein PSF3 OS=Cryptococcus neoformans var. neofor...	[more]

BLAST of Chy3G051660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3H3	2.1e-87	99.41	DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7UGU7	2.1e-87	99.41	DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0K8J6	1.0e-86	98.82	Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011640 PE=3 S...	[more]
A0A6J1BYI2	3.8e-81	91.18	DNA replication complex GINS protein PSF3-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1HEE0	5.0e-81	91.76	DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Chy3G051660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441464.1	2.53e-114	99.41	PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008...	[more]
KAA0055042.1	5.47e-114	99.41	DNA replication complex GINS protein PSF3-like [Cucumis melo var. makuwa] >TYK24...	[more]
XP_004138422.1	2.39e-113	98.82	DNA replication complex GINS protein PSF3 isoform X1 [Cucumis sativus] >KGN45788...	[more]
XP_038885801.1	1.88e-110	95.88	DNA replication complex GINS protein PSF3-like [Benincasa hispida] >XP_038885802...	[more]
XP_022134062.1	4.29e-106	91.18	DNA replication complex GINS protein PSF3-like [Momordica charantia]	[more]

BLAST of Chy3G051660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19080.1	2.6e-61	67.86	GINS complex protein	[more]
AT1G19080.2	2.6e-61	67.86	GINS complex protein	[more]
AT3G55490.1	2.6e-61	67.86	GINS complex protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021151	GINS subunit, domain A	PFAM	PF05916	Sld5	coord: 50..152 e-value: 1.2E-7 score: 32.1
IPR038437	GINS complex, subunit Psf3 superfamily	GENE3D	1.20.58.2050		coord: 20..171 e-value: 3.6E-41 score: 142.7
IPR010492	GINS complex, subunit Psf3	PANTHER	PTHR22768	UNCHARACTERIZED	coord: 22..189
None	No IPR available	CDD	cd11713	GINS_A_psf3	coord: 70..172 e-value: 5.24185E-29 score: 101.959
None	No IPR available	SUPERFAMILY	160059	PriA/YqbF domain	coord: 21..71
IPR036224	GINS, helical bundle-like domain superfamily	SUPERFAMILY	158573	GINS helical bundle-like	coord: 70..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G051660.1	Chy3G051660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902975	mitotic DNA replication initiation
cellular_component	GO:0000811	GINS complex