Chy3G050450 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G050450
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH03: 662632 .. 664491 (+)
RNA-Seq Expression	Chy3G050450
Synteny	Chy3G050450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCGCCGGCTATCATTTCTCAATCACCGCCTTGCTTAACTTTTCAACCTACGTCAACGTCACTATCTGCACGGCGGACCTGTTCCAAATGGAACCTCACTACTTTCAACCGTTGTAAAAGCTCCACAAATTTCCCGTTCAATTTTGTCGAAGACCATTCCAAGGCTTTGCCGGTCGCTTGCACAACGGGAAAATGTACTACTACTGAAGAATACGCCGATGTCGAATCTTGCAGCAATCAGTCGGTGAGTGGATGTTTGAGTCCCTATTTGATTGGGGTTTGGCTTCGCTCTAGTCGTAGCGCCAAGAAATTAAGGGCGGTACATGCTTTCATTTTGCGAAATTTTACAAGTTTTGGGATTTATGTTGGAAACAATTTGCTTAGTTCTTACTTAAGATTGGGAATGTTGGTTGATGCTAGAAAGGTGTTCGATGAAATGCCAATGAGGAGTGTTGTGACCTGGACGGCTATTATTAATGGATATATTGATTTGGATTTGACTGAAGAAGCTTTAGCGTTGTTCAGTGATTCGGTCAAGAACGGGGTGCTAGCAAATGGGCAGATGTTTGTTTGCATCTTGAACTTGTGTGCTAAGAGGTTGGATTTTGAGCTTGGGAGGCAAATTCATGGCGTTATTGTGAAAGGTAATCGCGGGAATTTGATTGTTGACAGTGCCATTATTTACTTTTATGCACAATGTAAAGATATTTCCAGTGCTTTTGTTGCATTTGAACGTATGCGGAGGCGTGATGTTGTTTGTTGGACTTCCATGATTACTTCTTGTTCCCAACAAGGGCTTGGACGAGAAGCGATTTCGATGTTTTCAAATATGCTAAGCGATGGATTTCTACCAAATGAGTTTTCCGTATGCAGTGTTCTCAAGGCTTGTGGAGAAGAGAGGGAATTGAAGATTGGGAGACAGTTACATGGTTTGATAATTAAAAAAATAATCCAGAATGATGTTTTTGTTGGGACTTCATTGGTTGATATGTATGCCAAGTGCGGAAACTTGGCGGATTCTAGAGAAGTATTCGACGGGATGAGGAATAGGAACACGGTTACCTGGACGTCAATCATAGCTGGTTATGCACGGGAGGGGCTCGGTGAGGAGGCTCTGAACCTCTTTAGGTTGATGAAGAGGCAAAGGATTCCTGCCAATAACTTAACCATTGTAAGTATTCTCCGCGCTTGCGGTTCGATTGAGGCGTCATTGACTGGGAGGGAAGTTCATGCCCAGATTGTAAAAAATTCATTTCAAACTAATATACACATAGGAAGCACTCTAGTTTGGTTCTACTGTAAATGTAGGAATCAACTTAAGGCCTCGATGGTTCTTCAGCTGATGCCGCTTAGAGATGTGGTTTCTTGGACAGCCATCATTTCTGGATGTGCTCATCTTGGGCACGAGTCCGAAGCGCTTGAATTTCTAAAAAACATGATAGAGGAAGGTGTTGAACCAAACTCCTTTACTTATTCGTCAACTTTAAAAGCGTGTGCCAAGATGGAAGCTGTCCTCCAAGGGAAAATGATCCACTCTTCCGCAAACAAAACATCTGCGTTGTCCAATGTTTTTGTGGGAAGTGCACTGATTTACATGTATGCAAAATGTGGATATGTAACCGAAGCTTCTCAAGTTTTCGACAGTATGCCGGTGAGGAATTTGGTTTCTTGGAAGGCCATGATTTTGTGTTATGCTAGGAACGGTCTGTGCCGAGAGGCATTAAAGCTCATGTATCGGATGCAGGCTGAAGGTTTCGAAGTGGACGATTACATTCTTGGAACAGTTTATGGAGCTTGTGGAGATGTGAAATGTGATGTGGATTCATCACTTGAATATAGGTTGCAAACTCATTGA

mRNA sequence

ATGTTCTCGCCGGCTATCATTTCTCAATCACCGCCTTGCTTAACTTTTCAACCTACGTCAACGTCACTATCTGCACGGCGGACCTGTTCCAAATGGAACCTCACTACTTTCAACCGTTGTAAAAGCTCCACAAATTTCCCGTTCAATTTTGTCGAAGACCATTCCAAGGCTTTGCCGGTCGCTTGCACAACGGGAAAATGTACTACTACTGAAGAATACGCCGATGTCGAATCTTGCAGCAATCAGTCGGTGAGTGGATGTTTGAGTCCCTATTTGATTGGGGTTTGGCTTCGCTCTAGTCGTAGCGCCAAGAAATTAAGGGCGGTACATGCTTTCATTTTGCGAAATTTTACAAGTTTTGGGATTTATGTTGGAAACAATTTGCTTAGTTCTTACTTAAGATTGGGAATGTTGGTTGATGCTAGAAAGGTGTTCGATGAAATGCCAATGAGGAGTGTTGTGACCTGGACGGCTATTATTAATGGATATATTGATTTGGATTTGACTGAAGAAGCTTTAGCGTTGTTCAGTGATTCGGTCAAGAACGGGGTGCTAGCAAATGGGCAGATGTTTGTTTGCATCTTGAACTTGTGTGCTAAGAGGTTGGATTTTGAGCTTGGGAGGCAAATTCATGGCGTTATTGTGAAAGGTAATCGCGGGAATTTGATTGTTGACAGTGCCATTATTTACTTTTATGCACAATGTAAAGATATTTCCAGTGCTTTTGTTGCATTTGAACGTATGCGGAGGCGTGATGTTGTTTGTTGGACTTCCATGATTACTTCTTGTTCCCAACAAGGGCTTGGACGAGAAGCGATTTCGATGTTTTCAAATATGCTAAGCGATGGATTTCTACCAAATGAGTTTTCCGTATGCAGTGTTCTCAAGGCTTGTGGAGAAGAGAGGGAATTGAAGATTGGGAGACAGTTACATGGTTTGATAATTAAAAAAATAATCCAGAATGATGTTTTTGTTGGGACTTCATTGGTTGATATGTATGCCAAGTGCGGAAACTTGGCGGATTCTAGAGAAGTATTCGACGGGATGAGGAATAGGAACACGGTTACCTGGACGTCAATCATAGCTGGTTATGCACGGGAGGGGCTCGGTGAGGAGGCTCTGAACCTCTTTAGGTTGATGAAGAGGCAAAGGATTCCTGCCAATAACTTAACCATTGTAAGTATTCTCCGCGCTTGCGGTTCGATTGAGGCGTCATTGACTGGGAGGGAAGTTCATGCCCAGATTGTAAAAAATTCATTTCAAACTAATATACACATAGGAAGCACTCTAGTTTGGTTCTACTGTAAATGTAGGAATCAACTTAAGGCCTCGATGGTTCTTCAGCTGATGCCGCTTAGAGATGTGGTTTCTTGGACAGCCATCATTTCTGGATGTGCTCATCTTGGGCACGAGTCCGAAGCGCTTGAATTTCTAAAAAACATGATAGAGGAAGGTGTTGAACCAAACTCCTTTACTTATTCGTCAACTTTAAAAGCGTGTGCCAAGATGGAAGCTGTCCTCCAAGGGAAAATGATCCACTCTTCCGCAAACAAAACATCTGCGTTGTCCAATGTTTTTGTGGGAAGTGCACTGATTTACATGTATGCAAAATGTGGATATGTAACCGAAGCTTCTCAAGTTTTCGACAGTATGCCGGTGAGGAATTTGGTTTCTTGGAAGGCCATGATTTTGTGTTATGCTAGGAACGGTCTGTGCCGAGAGGCATTAAAGCTCATGTATCGGATGCAGGCTGAAGGTTTCGAAGTGGACGATTACATTCTTGGAACAGTTTATGGAGCTTGTGGAGATGTGAAATGTGATGTGGATTCATCACTTGAATATAGGTTGCAAACTCATTGA

Coding sequence (CDS)

ATGTTCTCGCCGGCTATCATTTCTCAATCACCGCCTTGCTTAACTTTTCAACCTACGTCAACGTCACTATCTGCACGGCGGACCTGTTCCAAATGGAACCTCACTACTTTCAACCGTTGTAAAAGCTCCACAAATTTCCCGTTCAATTTTGTCGAAGACCATTCCAAGGCTTTGCCGGTCGCTTGCACAACGGGAAAATGTACTACTACTGAAGAATACGCCGATGTCGAATCTTGCAGCAATCAGTCGGTGAGTGGATGTTTGAGTCCCTATTTGATTGGGGTTTGGCTTCGCTCTAGTCGTAGCGCCAAGAAATTAAGGGCGGTACATGCTTTCATTTTGCGAAATTTTACAAGTTTTGGGATTTATGTTGGAAACAATTTGCTTAGTTCTTACTTAAGATTGGGAATGTTGGTTGATGCTAGAAAGGTGTTCGATGAAATGCCAATGAGGAGTGTTGTGACCTGGACGGCTATTATTAATGGATATATTGATTTGGATTTGACTGAAGAAGCTTTAGCGTTGTTCAGTGATTCGGTCAAGAACGGGGTGCTAGCAAATGGGCAGATGTTTGTTTGCATCTTGAACTTGTGTGCTAAGAGGTTGGATTTTGAGCTTGGGAGGCAAATTCATGGCGTTATTGTGAAAGGTAATCGCGGGAATTTGATTGTTGACAGTGCCATTATTTACTTTTATGCACAATGTAAAGATATTTCCAGTGCTTTTGTTGCATTTGAACGTATGCGGAGGCGTGATGTTGTTTGTTGGACTTCCATGATTACTTCTTGTTCCCAACAAGGGCTTGGACGAGAAGCGATTTCGATGTTTTCAAATATGCTAAGCGATGGATTTCTACCAAATGAGTTTTCCGTATGCAGTGTTCTCAAGGCTTGTGGAGAAGAGAGGGAATTGAAGATTGGGAGACAGTTACATGGTTTGATAATTAAAAAAATAATCCAGAATGATGTTTTTGTTGGGACTTCATTGGTTGATATGTATGCCAAGTGCGGAAACTTGGCGGATTCTAGAGAAGTATTCGACGGGATGAGGAATAGGAACACGGTTACCTGGACGTCAATCATAGCTGGTTATGCACGGGAGGGGCTCGGTGAGGAGGCTCTGAACCTCTTTAGGTTGATGAAGAGGCAAAGGATTCCTGCCAATAACTTAACCATTGTAAGTATTCTCCGCGCTTGCGGTTCGATTGAGGCGTCATTGACTGGGAGGGAAGTTCATGCCCAGATTGTAAAAAATTCATTTCAAACTAATATACACATAGGAAGCACTCTAGTTTGGTTCTACTGTAAATGTAGGAATCAACTTAAGGCCTCGATGGTTCTTCAGCTGATGCCGCTTAGAGATGTGGTTTCTTGGACAGCCATCATTTCTGGATGTGCTCATCTTGGGCACGAGTCCGAAGCGCTTGAATTTCTAAAAAACATGATAGAGGAAGGTGTTGAACCAAACTCCTTTACTTATTCGTCAACTTTAAAAGCGTGTGCCAAGATGGAAGCTGTCCTCCAAGGGAAAATGATCCACTCTTCCGCAAACAAAACATCTGCGTTGTCCAATGTTTTTGTGGGAAGTGCACTGATTTACATGTATGCAAAATGTGGATATGTAACCGAAGCTTCTCAAGTTTTCGACAGTATGCCGGTGAGGAATTTGGTTTCTTGGAAGGCCATGATTTTGTGTTATGCTAGGAACGGTCTGTGCCGAGAGGCATTAAAGCTCATGTATCGGATGCAGGCTGAAGGTTTCGAAGTGGACGATTACATTCTTGGAACAGTTTATGGAGCTTGTGGAGATGTGAAATGTGATGTGGATTCATCACTTGAATATAGGTTGCAAACTCATTGA

Protein sequence

MFSPAIISQSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHSKALPVACTTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACGDVKCDVDSSLEYRLQTH*

Homology

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BLAST of Chy3G050450 vs. ExPASy Swiss-Prot
Match: Q0WNP3 (Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A2 PE=1 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 2.2e-199
Identity = 334/530 (63.02%), Postives = 424/530 (80.00%), Query Frame = 0


Query: 92  LIGVWLRSSRSAKKLRAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMR 151
           L+  WL+SS   + ++ +HA  L+ F    IY GNNL+SS +RLG LV ARKVFD MP +
Sbjct: 87  LLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEK 146

Query: 152 SVVTWTAIINGYIDLDLTEEALALFSDSVKNGV-LANGQMFVCILNLCAKRLDFELGRQI 211
           + VTWTA+I+GY+   L +EA ALF D VK+G+   N +MFVC+LNLC++R +FELGRQ+
Sbjct: 147 NTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQV 206

Query: 212 HGVIVKGNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGR 271
           HG +VK   GNLIV+S+++YFYAQC +++SA  AF+ M  +DV+ WT++I++CS++G G 
Sbjct: 207 HGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGI 266

Query: 272 EAISMFSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLV 331
           +AI MF  ML+  FLPNEF+VCS+LKAC EE+ L+ GRQ+H L++K++I+ DVFVGTSL+
Sbjct: 267 KAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLM 326

Query: 332 DMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNL 391
           DMYAKCG ++D R+VFDGM NRNTVTWTSIIA +AREG GEEA++LFR+MKR+ + ANNL
Sbjct: 327 DMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNL 386

Query: 392 TIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLM 451
           T+VSILRACGS+ A L G+E+HAQI+KNS + N++IGSTLVW YCKC     A  VLQ +
Sbjct: 387 TVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQL 446

Query: 452 PLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGK 511
           P RDVVSWTA+ISGC+ LGHESEAL+FLK MI+EGVEPN FTYSS LKACA  E++L G+
Sbjct: 447 PSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGR 506

Query: 512 MIHSSANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNG 571
            IHS A K  ALSNVFVGSALI+MYAKCG+V+EA +VFDSMP +NLVSWKAMI+ YARNG
Sbjct: 507 SIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNG 566

Query: 572 LCREALKLMYRMQAEGFEVDDYILGTVYGACGDVKCD--VDSSLEYRLQT 619
            CREALKLMYRM+AEGFEVDDYI  T+   CGD++ D  V+SS    L+T
Sbjct: 567 FCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDEAVESSATCYLET 616

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BLAST of Chy3G050450 vs. ExPASy Swiss-Prot
Match: P93005 (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.5e-78
Identity = 169/515 (32.82%), Postives = 284/515 (55.15%), Query Frame = 0


Query: 99  SSRSAKKLRAVHAFILRNFTSFG-IYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWT 158
           S +S+   R  HA +++  +SFG IYV  +L+  Y + G++ D  KVF  MP R+  TW+
Sbjct: 130 SLQSSTVGRQAHALVVK-MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 189

Query: 159 AIINGYIDLDLTEEALALFSDSV--KNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIV 218
            +++GY      EEA+ +F+  +  K     +  +F  +L+  A  +   LGRQIH + +
Sbjct: 190 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITI 249

Query: 219 K-GNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAIS 278
           K G  G + + +A++  Y++C+ ++ A   F+    R+ + W++M+T  SQ G   EA+ 
Sbjct: 250 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 309

Query: 279 MFSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYA 338
           +FS M S G  P+E+++  VL AC +   L+ G+QLH  ++K   +  +F  T+LVDMYA
Sbjct: 310 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 369

Query: 339 KCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVS 398
           K G LAD+R+ FD ++ R+   WTS+I+GY +    EEAL L+R MK   I  N+ T+ S
Sbjct: 370 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 429

Query: 399 ILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRD 458
           +L+AC S+     G++VH   +K+ F   + IGS L   Y KC +    ++V +  P +D
Sbjct: 430 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 489

Query: 459 VVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHS 518
           VVSW A+ISG +H G   EALE  + M+ EG+EP+  T+ + + AC+    V +G    +
Sbjct: 490 VVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFN 549

Query: 519 SANKTSALS-NVFVGSALIYMYAKCGYVTEASQVFDSMPV-RNLVSWKAMILCYARNGLC 578
             +    L   V   + ++ + ++ G + EA +  +S  +   L  W+ ++     +G C
Sbjct: 550 MMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKC 609

Query: 579 REALKLMYRMQAEGF-EVDDYI-LGTVYGACGDVK 606
              +    ++ A G  E   Y+ L  +Y A G ++
Sbjct: 610 ELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMR 643

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BLAST of Chy3G050450 vs. ExPASy Swiss-Prot
Match: Q9LFI1 (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.3e-76
Identity = 169/509 (33.20%), Postives = 268/509 (52.65%), Query Frame = 0


Query: 99  SSRSAKKLRAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTA 158
           SSRS  + R +H  IL +   +   + N++LS Y + G L DAR+VFD MP R++V++T+
Sbjct: 79  SSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTS 138

Query: 159 IINGYIDLDLTEEALALFSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK-G 218
           +I GY       EA+ L+   ++  ++ +   F  I+  CA   D  LG+Q+H  ++K  
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198

Query: 219 NRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFS 278
           +  +LI  +A+I  Y +   +S A   F  +  +D++ W+S+I   SQ G   EA+S   
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258

Query: 279 NMLSDG-FLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKC 338
            MLS G F PNE+   S LKAC        G Q+HGL IK  +  +   G SL DMYA+C
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318

Query: 339 GNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSIL 398
           G L  +R VFD +   +T +W  IIAG A  G  +EA+++F  M+      + +++ S+L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378

Query: 399 RACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKA-SMVLQLMPLRDV 458
            A     A   G ++H+ I+K  F  ++ + ++L+  Y  C +     ++        D 
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438

Query: 459 VSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSS 518
           VSW  I++ C       E L   K M+    EP+  T  + L+ C ++ ++  G  +H  
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498

Query: 519 ANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREA 578
           + KT      F+ + LI MYAKCG + +A ++FDSM  R++VSW  +I+ YA++G   EA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558

Query: 579 LKLMYRMQAEGFEVDDYILGTVYGACGDV 605
           L L   M++ G E +      V  AC  V
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHV 587

[Close]

BLAST of Chy3G050450 vs. ExPASy Swiss-Prot
Match: Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.9e-74
Identity = 167/497 (33.60%), Postives = 268/497 (53.92%), Query Frame = 0


Query: 109 VHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDL 168
           VHA  ++   +  IYVG++L+S Y +   +  A KVF+ +  ++ V W A+I GY     
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408

Query: 169 TEEALALFSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRG-NLIVDSA 228
           + + + LF D   +G   +   F  +L+ CA   D E+G Q H +I+K     NL V +A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468

Query: 229 IIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPN 288
           ++  YA+C  +  A   FERM  RD V W ++I S  Q     EA  +F  M   G + +
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528

Query: 289 EFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFD 348
              + S LKAC     L  G+Q+H L +K  +  D+  G+SL+DMY+KCG + D+R+VF 
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588

Query: 349 GMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLT 408
            +   + V+  ++IAGY++  L EEA+ LF+ M  + +  + +T  +I+ AC   E+   
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 648

Query: 409 GREVHAQIVKNSFQT-NIHIGSTLVWFYCKCRNQLKA-SMVLQLMPLRDVVSWTAIISGC 468
           G + H QI K  F +   ++G +L+  Y   R   +A ++  +L   + +V WT ++SG 
Sbjct: 649 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 708

Query: 469 AHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNV 528
           +  G   EAL+F K M  +GV P+  T+ + L+ C+ + ++ +G+ IHS     +   + 
Sbjct: 709 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 768

Query: 529 FVGSALIYMYAKCGYVTEASQVFDSMPVR-NLVSWKAMILCYARNGLCREALKLMYRMQA 588
              + LI MYAKCG +  +SQVFD M  R N+VSW ++I  YA+NG   +ALK+   M+ 
Sbjct: 769 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 828

Query: 589 EGFEVDDYILGTVYGAC 602
                D+     V  AC
Sbjct: 829 SHIMPDEITFLGVLTAC 844

[Close]

BLAST of Chy3G050450 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.9e-74
Identity = 153/506 (30.24%), Postives = 266/506 (52.57%), Query Frame = 0


Query: 97  LRSSRSAKKLRAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTW 156
           L    S K+LR +   + +N      +    L+S + R G + +A +VF+ +  +  V +
Sbjct: 44  LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103

Query: 157 TAIINGYIDLDLTEEALALFSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK 216
             ++ G+  +   ++AL  F     + V      F  +L +C    +  +G++IHG++VK
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163

Query: 217 -GNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISM 276
            G   +L   + +   YA+C+ ++ A   F+RM  RD+V W +++   SQ G+ R A+ M
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223

Query: 277 FSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAK 336
             +M  +   P+  ++ SVL A    R + +G+++HG  ++    + V + T+LVDMYAK
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283

Query: 337 CGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSI 396
           CG+L  +R++FDGM  RN V+W S+I  Y +    +EA+ +F+ M  + +   +++++  
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343

Query: 397 LRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDV 456
           L AC  +     GR +H   V+     N+ + ++L+  YCKC+    A+ +   +  R +
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403

Query: 457 VSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSS 516
           VSW A+I G A  G   +AL +   M    V+P++FTY S + A A++      K IH  
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463

Query: 517 ANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREA 576
             ++    NVFV +AL+ MYAKCG +  A  +FD M  R++ +W AMI  Y  +G  + A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523

Query: 577 LKLMYRMQAEGFEVDDYILGTVYGAC 602
           L+L   MQ    + +     +V  AC
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISAC 549

[Close]

BLAST of Chy3G050450 vs. ExPASy TrEMBL
Match: A0A0A0LSX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403710 PE=4 SV=1)

HSP 1 Score: 1229.5 bits (3180), Expect = 0.0e+00
Identity = 612/619 (98.87%), Postives = 615/619 (99.35%), Query Frame = 0


Query: 1   MFSPAIISQSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHSKALPV 60
           MFSPAIISQSPPCLTFQPTSTSLS RRTCSKWNLTTFNRCKSST+FPFNFVEDHSKALPV
Sbjct: 1   MFSPAIISQSPPCLTFQPTSTSLSTRRTCSKWNLTTFNRCKSSTSFPFNFVEDHSKALPV 60

Query: 61  ACTTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILRNFTSF 120
           AC TGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRS KKLRAVHAFILRNFTSF
Sbjct: 61  ACATGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSVKKLRAVHAFILRNFTSF 120

Query: 121 GIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSV 180
           GIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSV
Sbjct: 121 GIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSV 180

Query: 181 KNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISS 240
           K+GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISS
Sbjct: 181 KSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISS 240

Query: 241 AFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGE 300
           AFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSD FLPNEFSVCSVLKACGE
Sbjct: 241 AFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGE 300

Query: 301 ERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSI 360
           ERELKIGRQLHGLIIKKII+NDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSI
Sbjct: 301 ERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSI 360

Query: 361 IAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSF 420
           IAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSF
Sbjct: 361 IAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSF 420

Query: 421 QTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKN 480
           QTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKN
Sbjct: 421 QTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKN 480

Query: 481 MIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGY 540
           MIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGY
Sbjct: 481 MIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGY 540

Query: 541 VTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGA 600
           VTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGA
Sbjct: 541 VTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGA 600

Query: 601 CGDVKCDVDSSLEYRLQTH 620
           CGDVKCDVDSSLEYRLQTH
Sbjct: 601 CGDVKCDVDSSLEYRLQTH 619

[Close]

BLAST of Chy3G050450 vs. ExPASy TrEMBL
Match: A0A5D3C5K1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001360 PE=4 SV=1)

HSP 1 Score: 1184.1 bits (3062), Expect = 0.0e+00
Identity = 595/624 (95.35%), Postives = 603/624 (96.63%), Query Frame = 0


Query: 1   MFSPAII-----SQSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHS 60
           MFSPA I     SQSPPCLTFQ TSTS SARRTCSK NLTTFNR KSSTNFPF FVED S
Sbjct: 1   MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 60

Query: 61  KALPVACTTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILR 120
           KA  +ACTT KCTTTEEYADVESCSNQSVSGCLS YLIGVWLRSSRS KKLRAVHAFILR
Sbjct: 61  KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 120

Query: 121 NFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180
           +FTSF IYVGNNLLSSYLR+GMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL
Sbjct: 121 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180

Query: 181 FSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240
           FSDSVK+GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC
Sbjct: 181 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240

Query: 241 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVL 300
           KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLG+EAISMFSNMLSDGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 300

Query: 301 KACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTV 360
           KACGEERELKIGRQLHGLIIKKII+NDVFVGTSLVDMYAKCGNL DSREVFDGMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 360

Query: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420
           TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420

Query: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480
           VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMY 540
           EFLKNMIEEGVEPNSFTYSSTLKACAKMEA+LQGKMIHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 540

Query: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600

Query: 601 TVYGACGDVKCDVDSSLEYRLQTH 620
           TVYGACGDVKCDVDSS E+ LQTH
Sbjct: 601 TVYGACGDVKCDVDSSFEHSLQTH 624

[Close]

BLAST of Chy3G050450 vs. ExPASy TrEMBL
Match: A0A1S3B3M7 (pentatricopeptide repeat-containing protein At4g18520 OS=Cucumis melo OX=3656 GN=LOC103485432 PE=4 SV=1)

HSP 1 Score: 1181.4 bits (3055), Expect = 0.0e+00
Identity = 594/624 (95.19%), Postives = 602/624 (96.47%), Query Frame = 0


Query: 1   MFSPAII-----SQSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHS 60
           MFSPA I     SQSPPCLTFQ TSTS SARRTCSK NLTTFNR KSSTNFPF FVED S
Sbjct: 1   MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 60

Query: 61  KALPVACTTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILR 120
           KA  +ACTT KCTTTEEYADVESCSNQSVSGCLS YLIGVWLRSSRS KKLRAVHAFILR
Sbjct: 61  KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 120

Query: 121 NFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180
           +FTSF IYVGNNLLSSYLR+GMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL
Sbjct: 121 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180

Query: 181 FSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240
           FSDSVK+GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC
Sbjct: 181 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240

Query: 241 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVL 300
           KDISSAFVAFERM RRDVVCWTSMITSCSQQGLG+EAISMFSNMLSDGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFERMGRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 300

Query: 301 KACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTV 360
           KACGEERELKIGRQLHGLIIKKII+NDVFVGTSLVDMYAKCGNL DSREVFDGMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 360

Query: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420
           TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420

Query: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480
           VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMY 540
           EFLKNMIEEGVEPNSFTYSSTLKACAKMEA+LQGKMIHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 540

Query: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600

Query: 601 TVYGACGDVKCDVDSSLEYRLQTH 620
           TVYGACGDVKCDVDSS E+ LQTH
Sbjct: 601 TVYGACGDVKCDVDSSFEHSLQTH 624

[Close]

BLAST of Chy3G050450 vs. ExPASy TrEMBL
Match: A0A6J1FJ52 (pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444741 PE=4 SV=1)

HSP 1 Score: 1064.3 bits (2751), Expect = 1.9e-307
Identity = 524/616 (85.06%), Postives = 564/616 (91.56%), Query Frame = 0


Query: 3   SPAIISQSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHSKALPVAC 62
           S A ISQSPPC + QP   SLS RR CSKWNLT+ +RCKS TN  FNF++D  +A  VAC
Sbjct: 8   STATISQSPPCFSVQPPPISLSTRRACSKWNLTSIDRCKSPTNLRFNFIKDPFRASLVAC 67

Query: 63  TTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILRNFTSFGI 122
           TT  C T +E  DVESCSN+ V+GCLSPYLI  WLRSSR  K+LRA+HAFILR+F+S   
Sbjct: 68  TTETC-TAQECTDVESCSNEPVNGCLSPYLIAAWLRSSRGVKELRAIHAFILRHFSSLVT 127

Query: 123 YVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKN 182
           YVGNNL+SSYLR GML+DAR+VFDEMPMRSVVTWTAIINGYID DLT+EAL LF DSV++
Sbjct: 128 YVGNNLISSYLRFGMLIDARRVFDEMPMRSVVTWTAIINGYIDFDLTDEALGLFGDSVRS 187

Query: 183 GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISSAF 242
           GV ANG+MFVCILNLCAKRLDFELGRQIHG IVKGN GNLIVDSAI+YFYAQCKDISSAF
Sbjct: 188 GVRANGKMFVCILNLCAKRLDFELGRQIHGAIVKGNWGNLIVDSAIVYFYAQCKDISSAF 247

Query: 243 VAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEER 302
           VAFE M +RD+VCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEER
Sbjct: 248 VAFEHMPKRDIVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEER 307

Query: 303 ELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIA 362
           ELKIG+QLHGL+IKKII+NDVFVG+SLVDMYAK G+LADSREVFD MRNRNTVTWTSIIA
Sbjct: 308 ELKIGKQLHGLVIKKIIKNDVFVGSSLVDMYAKSGSLADSREVFDEMRNRNTVTWTSIIA 367

Query: 363 GYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQT 422
           GYAREGLGEEA+NLFRLM +QR+PAN+LTIVSILRACGSI ASLTGREVHAQIVKNSFQT
Sbjct: 368 GYAREGLGEEAVNLFRLMNKQRVPANDLTIVSILRACGSIGASLTGREVHAQIVKNSFQT 427

Query: 423 NIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMI 482
           N+HIGSTLVWFYCKCRNQ KASMVLQ MPLRDVVSWTAIISGCAHLGHESEALEFL+NMI
Sbjct: 428 NLHIGSTLVWFYCKCRNQPKASMVLQQMPLRDVVSWTAIISGCAHLGHESEALEFLENMI 487

Query: 483 EEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVT 542
           EEGVEPNSFTYSS LKACAKMEA+LQG++IHSSANKTSA+SNVFVGSALIYMYAKCGYVT
Sbjct: 488 EEGVEPNSFTYSSALKACAKMEAILQGRLIHSSANKTSAVSNVFVGSALIYMYAKCGYVT 547

Query: 543 EASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACG 602
           EASQVFDSMP RNLVSWKAMILCYARNGLCREALKLMYRMQAEG EVDD+I GTVYG CG
Sbjct: 548 EASQVFDSMPERNLVSWKAMILCYARNGLCREALKLMYRMQAEGIEVDDHIFGTVYGVCG 607

Query: 603 DVKCDVDSSLEYRLQT 619
           DVKC+VDSSLEY LQT
Sbjct: 608 DVKCEVDSSLEYSLQT 622

[Close]

BLAST of Chy3G050450 vs. ExPASy TrEMBL
Match: A0A6J1JUB8 (pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111489800 PE=4 SV=1)

HSP 1 Score: 1060.4 bits (2741), Expect = 2.8e-306
Identity = 522/616 (84.74%), Postives = 562/616 (91.23%), Query Frame = 0


Query: 3   SPAIISQSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHSKALPVAC 62
           S A ISQSPPC + QP   SLS RR CSKWNLT+ +RCKS TN  FNF++D  +A  VAC
Sbjct: 8   STATISQSPPCFSVQPPPISLSTRRACSKWNLTSIDRCKSPTNLRFNFIKDPFRASLVAC 67

Query: 63  TTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILRNFTSFGI 122
           TT  C T +E  DVESCSN+ V+GCLSPYLI  WLRSSR  K+LRA+HAFI R+FTS   
Sbjct: 68  TTETC-TAQECTDVESCSNEPVNGCLSPYLIAAWLRSSRGVKELRAIHAFIWRHFTSLVT 127

Query: 123 YVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKN 182
           YVGNNL+SSYLR GML+DAR+VFDEMPMRSVVTWTAIINGYID DLT+EAL LF DSV++
Sbjct: 128 YVGNNLISSYLRFGMLIDARRVFDEMPMRSVVTWTAIINGYIDFDLTDEALGLFGDSVRS 187

Query: 183 GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISSAF 242
           GV  NG+MFVCILNLCAKRLDFELGRQIHG IVKGN GNLIVDSAI+YFYAQCKDISSAF
Sbjct: 188 GVRVNGKMFVCILNLCAKRLDFELGRQIHGAIVKGNWGNLIVDSAIVYFYAQCKDISSAF 247

Query: 243 VAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEER 302
           VAFE M +RD+VCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEER
Sbjct: 248 VAFEHMPKRDIVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEER 307

Query: 303 ELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIA 362
           ELKIG+QLHGL+IKKII+NDVFVG+SLVDMYAK G+LADSREVFD MRNRNTVTWTSIIA
Sbjct: 308 ELKIGKQLHGLVIKKIIKNDVFVGSSLVDMYAKSGSLADSREVFDEMRNRNTVTWTSIIA 367

Query: 363 GYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQT 422
           GYAREGLGEEA+NLFRLM +QR+PAN+LTIVSILRACGSI ASLTGREVHAQIVKNSFQT
Sbjct: 368 GYAREGLGEEAVNLFRLMNKQRVPANDLTIVSILRACGSIGASLTGREVHAQIVKNSFQT 427

Query: 423 NIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMI 482
           N+HIGSTLVWFYCKCRNQ KASMVLQ MPLRDVVSWTAIISGCAHLGHESEALEFL+NMI
Sbjct: 428 NLHIGSTLVWFYCKCRNQPKASMVLQQMPLRDVVSWTAIISGCAHLGHESEALEFLENMI 487

Query: 483 EEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVT 542
           EEGVEPNSFTYSS LKACAKMEA+LQG++IHSSANK+SA+SNVFVGSALIYMYAKCGYVT
Sbjct: 488 EEGVEPNSFTYSSALKACAKMEAILQGRLIHSSANKSSAVSNVFVGSALIYMYAKCGYVT 547

Query: 543 EASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACG 602
           EASQVFDSMP RNLVSWKAMILCYARNGLCREALKLMYRMQAEG EVDD+I GTVYG CG
Sbjct: 548 EASQVFDSMPERNLVSWKAMILCYARNGLCREALKLMYRMQAEGIEVDDHIFGTVYGVCG 607

Query: 603 DVKCDVDSSLEYRLQT 619
           DVKC+VDSSLEY LQT
Sbjct: 608 DVKCEVDSSLEYSLQT 622

[Close]

BLAST of Chy3G050450 vs. NCBI nr
Match: XP_004138810.1 (pentatricopeptide repeat-containing protein At4g18520, chloroplastic [Cucumis sativus] >KGN63116.1 hypothetical protein Csa_022382 [Cucumis sativus])

HSP 1 Score: 1228 bits (3176), Expect = 0.0
Identity = 612/619 (98.87%), Postives = 615/619 (99.35%), Query Frame = 0


Query: 1   MFSPAIISQSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHSKALPV 60
           MFSPAIISQSPPCLTFQPTSTSLS RRTCSKWNLTTFNRCKSST+FPFNFVEDHSKALPV
Sbjct: 1   MFSPAIISQSPPCLTFQPTSTSLSTRRTCSKWNLTTFNRCKSSTSFPFNFVEDHSKALPV 60

Query: 61  ACTTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILRNFTSF 120
           AC TGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRS KKLRAVHAFILRNFTSF
Sbjct: 61  ACATGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSVKKLRAVHAFILRNFTSF 120

Query: 121 GIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSV 180
           GIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSV
Sbjct: 121 GIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSV 180

Query: 181 KNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISS 240
           K+GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISS
Sbjct: 181 KSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISS 240

Query: 241 AFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGE 300
           AFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSD FLPNEFSVCSVLKACGE
Sbjct: 241 AFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGE 300

Query: 301 ERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSI 360
           ERELKIGRQLHGLIIKKII+NDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSI
Sbjct: 301 ERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSI 360

Query: 361 IAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSF 420
           IAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSF
Sbjct: 361 IAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSF 420

Query: 421 QTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKN 480
           QTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKN
Sbjct: 421 QTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKN 480

Query: 481 MIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGY 540
           MIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGY
Sbjct: 481 MIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGY 540

Query: 541 VTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGA 600
           VTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGA
Sbjct: 541 VTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGA 600

Query: 601 CGDVKCDVDSSLEYRLQTH 619
           CGDVKCDVDSSLEYRLQTH
Sbjct: 601 CGDVKCDVDSSLEYRLQTH 619

[Close]

BLAST of Chy3G050450 vs. NCBI nr
Match: TYK06655.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1182 bits (3058), Expect = 0.0
Identity = 595/624 (95.35%), Postives = 603/624 (96.63%), Query Frame = 0


Query: 1   MFSPAIIS-----QSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHS 60
           MFSPA IS     QSPPCLTFQ TSTS SARRTCSK NLTTFNR KSSTNFPF FVED S
Sbjct: 1   MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 60

Query: 61  KALPVACTTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILR 120
           KA  +ACTT KCTTTEEYADVESCSNQSVSGCLS YLIGVWLRSSRS KKLRAVHAFILR
Sbjct: 61  KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 120

Query: 121 NFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180
           +FTSF IYVGNNLLSSYLR+GMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL
Sbjct: 121 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180

Query: 181 FSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240
           FSDSVK+GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC
Sbjct: 181 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240

Query: 241 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVL 300
           KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLG+EAISMFSNMLSDGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 300

Query: 301 KACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTV 360
           KACGEERELKIGRQLHGLIIKKII+NDVFVGTSLVDMYAKCGNL DSREVFDGMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 360

Query: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420
           TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420

Query: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480
           VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMY 540
           EFLKNMIEEGVEPNSFTYSSTLKACAKMEA+LQGKMIHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 540

Query: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600

Query: 601 TVYGACGDVKCDVDSSLEYRLQTH 619
           TVYGACGDVKCDVDSS E+ LQTH
Sbjct: 601 TVYGACGDVKCDVDSSFEHSLQTH 624

[Close]

BLAST of Chy3G050450 vs. NCBI nr
Match: XP_008441245.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g18520 [Cucumis melo])

HSP 1 Score: 1179 bits (3051), Expect = 0.0
Identity = 594/624 (95.19%), Postives = 602/624 (96.47%), Query Frame = 0


Query: 1   MFSPAIIS-----QSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHS 60
           MFSPA IS     QSPPCLTFQ TSTS SARRTCSK NLTTFNR KSSTNFPF FVED S
Sbjct: 1   MFSPAFISTAITSQSPPCLTFQRTSTSQSARRTCSKRNLTTFNRYKSSTNFPFKFVEDQS 60

Query: 61  KALPVACTTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILR 120
           KA  +ACTT KCTTTEEYADVESCSNQSVSGCLS YLIGVWLRSSRS KKLRAVHAFILR
Sbjct: 61  KAFSIACTTAKCTTTEEYADVESCSNQSVSGCLSHYLIGVWLRSSRSVKKLRAVHAFILR 120

Query: 121 NFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180
           +FTSF IYVGNNLLSSYLR+GMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL
Sbjct: 121 HFTSFSIYVGNNLLSSYLRVGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALAL 180

Query: 181 FSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240
           FSDSVK+GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC
Sbjct: 181 FSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQC 240

Query: 241 KDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVL 300
           KDISSAFVAFERM RRDVVCWTSMITSCSQQGLG+EAISMFSNMLSDGFLPNEFSVCSVL
Sbjct: 241 KDISSAFVAFERMGRRDVVCWTSMITSCSQQGLGQEAISMFSNMLSDGFLPNEFSVCSVL 300

Query: 301 KACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTV 360
           KACGEERELKIGRQLHGLIIKKII+NDVFVGTSLVDMYAKCGNL DSREVFDGMRNRNTV
Sbjct: 301 KACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLVDSREVFDGMRNRNTV 360

Query: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420
           TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI
Sbjct: 361 TWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQI 420

Query: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480
           VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL
Sbjct: 421 VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEAL 480

Query: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMY 540
           EFLKNMIEEGVEPNSFTYSSTLKACAKMEA+LQGKMIHSSANKTSALSNVFVGSALIYMY
Sbjct: 481 EFLKNMIEEGVEPNSFTYSSTLKACAKMEAILQGKMIHSSANKTSALSNVFVGSALIYMY 540

Query: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600
           AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG
Sbjct: 541 AKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILG 600

Query: 601 TVYGACGDVKCDVDSSLEYRLQTH 619
           TVYGACGDVKCDVDSS E+ LQTH
Sbjct: 601 TVYGACGDVKCDVDSSFEHSLQTH 624

[Close]

BLAST of Chy3G050450 vs. NCBI nr
Match: XP_038884364.1 (pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 1103 bits (2853), Expect = 0.0
Identity = 548/617 (88.82%), Postives = 579/617 (93.84%), Query Frame = 0


Query: 3   SPAIISQSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHSKALPVAC 62
           S A IS  PPC + QP  T L+ARRTCSKWN T+ + CKSSTNF  NFV+D S+A PVAC
Sbjct: 8   STATISHPPPCFSVQPPPTLLTARRTCSKWNFTSIDHCKSSTNFRLNFVKDLSRASPVAC 67

Query: 63  TTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILRNFTSFGI 122
              +  TT+EYA+VESCS+QSVSGCLSPYLI VWLRSSRSAK+LRA+HAFILR+ TSF I
Sbjct: 68  I-AETFTTQEYANVESCSSQSVSGCLSPYLIAVWLRSSRSAKELRAIHAFILRHITSFEI 127

Query: 123 YVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKN 182
           YVGNNL+SSYLR GMLVDARK FDEMP+R+VVTWT IINGYI LD TEEAL LFSDSVKN
Sbjct: 128 YVGNNLVSSYLRFGMLVDARKAFDEMPVRNVVTWTTIINGYIHLDFTEEALGLFSDSVKN 187

Query: 183 GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISSAF 242
           GV ANG+MFVCILNLCAKRLDFELGRQIHGVIVKGN GNLI+DSAI+YFYAQCKDISSAF
Sbjct: 188 GVQANGKMFVCILNLCAKRLDFELGRQIHGVIVKGNWGNLIIDSAIVYFYAQCKDISSAF 247

Query: 243 VAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEER 302
           VAFE M +RDVVCWTSMITSCSQQGLGREAIS+FSNML+DGFLPNEFSVCSVLKACGEER
Sbjct: 248 VAFEHMPKRDVVCWTSMITSCSQQGLGREAISLFSNMLNDGFLPNEFSVCSVLKACGEER 307

Query: 303 ELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIA 362
           ELKIGRQLHGLIIKKII+NDVFVGTSLVDMYAKCGNLADSREVF+GMRNRNTVTWTSIIA
Sbjct: 308 ELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFNGMRNRNTVTWTSIIA 367

Query: 363 GYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQT 422
           GYAREG GEEA+NLFRLMKRQRIPANNLTIVSILRACGSI ASLTGREVHAQIVK+SFQT
Sbjct: 368 GYAREGRGEEAVNLFRLMKRQRIPANNLTIVSILRACGSIGASLTGREVHAQIVKSSFQT 427

Query: 423 NIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMI 482
           NIHIGSTLVWFYCKCRN+LKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNM+
Sbjct: 428 NIHIGSTLVWFYCKCRNRLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMV 487

Query: 483 EEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVT 542
           EEGVEPNSFTYSS LKACAKMEA+LQGK+IHSSANKTSALSNVFVGSALIYMYAKCGYVT
Sbjct: 488 EEGVEPNSFTYSSALKACAKMEAILQGKLIHSSANKTSALSNVFVGSALIYMYAKCGYVT 547

Query: 543 EASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACG 602
           EASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEG EVDDYILGTVYGACG
Sbjct: 548 EASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGIEVDDYILGTVYGACG 607

Query: 603 DVKCDVDSSLEYRLQTH 619
           DVKCDVDSSLEYRLQT+
Sbjct: 608 DVKCDVDSSLEYRLQTY 623

[Close]

BLAST of Chy3G050450 vs. NCBI nr
Match: KAG7015915.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1063 bits (2748), Expect = 0.0
Identity = 524/616 (85.06%), Postives = 564/616 (91.56%), Query Frame = 0


Query: 3   SPAIISQSPPCLTFQPTSTSLSARRTCSKWNLTTFNRCKSSTNFPFNFVEDHSKALPVAC 62
           S A ISQSPPC + QP   SLS RR CSKWNLT+ +RCKS TN  FNF++D  +A  VAC
Sbjct: 53  STATISQSPPCFSVQPPPISLSTRRACSKWNLTSIDRCKSPTNLRFNFIKDPFRASLVAC 112

Query: 63  TTGKCTTTEEYADVESCSNQSVSGCLSPYLIGVWLRSSRSAKKLRAVHAFILRNFTSFGI 122
           TT  CT  +E  DVESCSN+ V+GCLSPYLI  WLRSSR  K+LRA+HAFILR+F+S   
Sbjct: 113 TTETCTA-QECTDVESCSNEPVNGCLSPYLIAAWLRSSRGVKELRAIHAFILRHFSSLVT 172

Query: 123 YVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKN 182
           YVGNNL+SSYLR GML+DAR+VFDEMPMRSVVTWTAIINGYID DLT+EAL LF DSV++
Sbjct: 173 YVGNNLISSYLRFGMLIDARRVFDEMPMRSVVTWTAIINGYIDFDLTDEALGLFGDSVRS 232

Query: 183 GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISSAF 242
           GV ANG+MFVCILNLCAKRLDFELGRQIHG IVKGN GNLIVDSAI+YFYAQCKDISSAF
Sbjct: 233 GVRANGKMFVCILNLCAKRLDFELGRQIHGAIVKGNWGNLIVDSAIVYFYAQCKDISSAF 292

Query: 243 VAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEER 302
           VAFE M +RD+VCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEER
Sbjct: 293 VAFEHMPKRDIVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPNEFSVCSVLKACGEER 352

Query: 303 ELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIA 362
           ELKIG+QLHGL+IKKII+NDVFVG+SLVDMYAK G+LADSREVFD MRNRNTVTWTSIIA
Sbjct: 353 ELKIGKQLHGLVIKKIIKNDVFVGSSLVDMYAKSGSLADSREVFDEMRNRNTVTWTSIIA 412

Query: 363 GYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQT 422
           GYAREGLGEEA+NLFRLM +QR+PAN+LTIVSILRACGSI ASLTGREVHAQIVKNSFQT
Sbjct: 413 GYAREGLGEEAVNLFRLMNKQRVPANDLTIVSILRACGSIGASLTGREVHAQIVKNSFQT 472

Query: 423 NIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMI 482
           N+HIGSTLVWFYCKCRNQ KASMVLQ MPLRDVVSWTAIISGCAHLGHESEALEFL+NMI
Sbjct: 473 NLHIGSTLVWFYCKCRNQPKASMVLQQMPLRDVVSWTAIISGCAHLGHESEALEFLENMI 532

Query: 483 EEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVT 542
           EEGVEPNSFTYSS LKACAKMEA+LQG++IHSSANKTSA+SNVFVGSALIYMYAKCGYVT
Sbjct: 533 EEGVEPNSFTYSSALKACAKMEAILQGRLIHSSANKTSAVSNVFVGSALIYMYAKCGYVT 592

Query: 543 EASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACG 602
           EASQVFDSMP RNLVSWKAMILCYARNGLCREALKLMYRMQAEG EVDD+I GTVYG CG
Sbjct: 593 EASQVFDSMPERNLVSWKAMILCYARNGLCREALKLMYRMQAEGIEVDDHIFGTVYGVCG 652

Query: 603 DVKCDVDSSLEYRLQT 618
           DVKC+VDSSLEY LQT
Sbjct: 653 DVKCEVDSSLEYSLQT 667

[Close]

BLAST of Chy3G050450 vs. TAIR 10
Match: AT4G18520.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 696.8 bits (1797), Expect = 1.6e-200
Identity = 334/530 (63.02%), Postives = 424/530 (80.00%), Query Frame = 0


Query: 92  LIGVWLRSSRSAKKLRAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMR 151
           L+  WL+SS   + ++ +HA  L+ F    IY GNNL+SS +RLG LV ARKVFD MP +
Sbjct: 87  LLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEK 146

Query: 152 SVVTWTAIINGYIDLDLTEEALALFSDSVKNGV-LANGQMFVCILNLCAKRLDFELGRQI 211
           + VTWTA+I+GY+   L +EA ALF D VK+G+   N +MFVC+LNLC++R +FELGRQ+
Sbjct: 147 NTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQV 206

Query: 212 HGVIVKGNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGR 271
           HG +VK   GNLIV+S+++YFYAQC +++SA  AF+ M  +DV+ WT++I++CS++G G 
Sbjct: 207 HGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGI 266

Query: 272 EAISMFSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLV 331
           +AI MF  ML+  FLPNEF+VCS+LKAC EE+ L+ GRQ+H L++K++I+ DVFVGTSL+
Sbjct: 267 KAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLM 326

Query: 332 DMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNL 391
           DMYAKCG ++D R+VFDGM NRNTVTWTSIIA +AREG GEEA++LFR+MKR+ + ANNL
Sbjct: 327 DMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNL 386

Query: 392 TIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLM 451
           T+VSILRACGS+ A L G+E+HAQI+KNS + N++IGSTLVW YCKC     A  VLQ +
Sbjct: 387 TVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQL 446

Query: 452 PLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGK 511
           P RDVVSWTA+ISGC+ LGHESEAL+FLK MI+EGVEPN FTYSS LKACA  E++L G+
Sbjct: 447 PSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGR 506

Query: 512 MIHSSANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNG 571
            IHS A K  ALSNVFVGSALI+MYAKCG+V+EA +VFDSMP +NLVSWKAMI+ YARNG
Sbjct: 507 SIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNG 566

Query: 572 LCREALKLMYRMQAEGFEVDDYILGTVYGACGDVKCD--VDSSLEYRLQT 619
            CREALKLMYRM+AEGFEVDDYI  T+   CGD++ D  V+SS    L+T
Sbjct: 567 FCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDEAVESSATCYLET 616

[Close]

BLAST of Chy3G050450 vs. TAIR 10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 292.7 bits (748), Expect = 6.8e-79
Identity = 169/515 (32.82%), Postives = 284/515 (55.15%), Query Frame = 0


Query: 99  SSRSAKKLRAVHAFILRNFTSFG-IYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWT 158
           S +S+   R  HA +++  +SFG IYV  +L+  Y + G++ D  KVF  MP R+  TW+
Sbjct: 130 SLQSSTVGRQAHALVVK-MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 189

Query: 159 AIINGYIDLDLTEEALALFSDSV--KNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIV 218
            +++GY      EEA+ +F+  +  K     +  +F  +L+  A  +   LGRQIH + +
Sbjct: 190 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITI 249

Query: 219 K-GNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAIS 278
           K G  G + + +A++  Y++C+ ++ A   F+    R+ + W++M+T  SQ G   EA+ 
Sbjct: 250 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 309

Query: 279 MFSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYA 338
           +FS M S G  P+E+++  VL AC +   L+ G+QLH  ++K   +  +F  T+LVDMYA
Sbjct: 310 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 369

Query: 339 KCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVS 398
           K G LAD+R+ FD ++ R+   WTS+I+GY +    EEAL L+R MK   I  N+ T+ S
Sbjct: 370 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 429

Query: 399 ILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRD 458
           +L+AC S+     G++VH   +K+ F   + IGS L   Y KC +    ++V +  P +D
Sbjct: 430 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 489

Query: 459 VVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHS 518
           VVSW A+ISG +H G   EALE  + M+ EG+EP+  T+ + + AC+    V +G    +
Sbjct: 490 VVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFN 549

Query: 519 SANKTSALS-NVFVGSALIYMYAKCGYVTEASQVFDSMPV-RNLVSWKAMILCYARNGLC 578
             +    L   V   + ++ + ++ G + EA +  +S  +   L  W+ ++     +G C
Sbjct: 550 MMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKC 609

Query: 579 REALKLMYRMQAEGF-EVDDYI-LGTVYGACGDVK 606
              +    ++ A G  E   Y+ L  +Y A G ++
Sbjct: 610 ELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMR 643

[Close]

BLAST of Chy3G050450 vs. TAIR 10
Match: AT3G53360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 288.1 bits (736), Expect = 1.7e-77
Identity = 169/509 (33.20%), Postives = 268/509 (52.65%), Query Frame = 0


Query: 99  SSRSAKKLRAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTA 158
           SSRS  + R +H  IL +   +   + N++LS Y + G L DAR+VFD MP R++V++T+
Sbjct: 79  SSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTS 138

Query: 159 IINGYIDLDLTEEALALFSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK-G 218
           +I GY       EA+ L+   ++  ++ +   F  I+  CA   D  LG+Q+H  ++K  
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198

Query: 219 NRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFS 278
           +  +LI  +A+I  Y +   +S A   F  +  +D++ W+S+I   SQ G   EA+S   
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258

Query: 279 NMLSDG-FLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKC 338
            MLS G F PNE+   S LKAC        G Q+HGL IK  +  +   G SL DMYA+C
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318

Query: 339 GNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSIL 398
           G L  +R VFD +   +T +W  IIAG A  G  +EA+++F  M+      + +++ S+L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378

Query: 399 RACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKA-SMVLQLMPLRDV 458
            A     A   G ++H+ I+K  F  ++ + ++L+  Y  C +     ++        D 
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438

Query: 459 VSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSS 518
           VSW  I++ C       E L   K M+    EP+  T  + L+ C ++ ++  G  +H  
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498

Query: 519 ANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREA 578
           + KT      F+ + LI MYAKCG + +A ++FDSM  R++VSW  +I+ YA++G   EA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558

Query: 579 LKLMYRMQAEGFEVDDYILGTVYGACGDV 605
           L L   M++ G E +      V  AC  V
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHV 587

[Close]

BLAST of Chy3G050450 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 3.5e-75
Identity = 153/506 (30.24%), Postives = 266/506 (52.57%), Query Frame = 0


Query: 97  LRSSRSAKKLRAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTW 156
           L    S K+LR +   + +N      +    L+S + R G + +A +VF+ +  +  V +
Sbjct: 44  LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103

Query: 157 TAIINGYIDLDLTEEALALFSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK 216
             ++ G+  +   ++AL  F     + V      F  +L +C    +  +G++IHG++VK
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163

Query: 217 -GNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISM 276
            G   +L   + +   YA+C+ ++ A   F+RM  RD+V W +++   SQ G+ R A+ M
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223

Query: 277 FSNMLSDGFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAK 336
             +M  +   P+  ++ SVL A    R + +G+++HG  ++    + V + T+LVDMYAK
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283

Query: 337 CGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSI 396
           CG+L  +R++FDGM  RN V+W S+I  Y +    +EA+ +F+ M  + +   +++++  
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343

Query: 397 LRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDV 456
           L AC  +     GR +H   V+     N+ + ++L+  YCKC+    A+ +   +  R +
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403

Query: 457 VSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSS 516
           VSW A+I G A  G   +AL +   M    V+P++FTY S + A A++      K IH  
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463

Query: 517 ANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREA 576
             ++    NVFV +AL+ MYAKCG +  A  +FD M  R++ +W AMI  Y  +G  + A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523

Query: 577 LKLMYRMQAEGFEVDDYILGTVYGAC 602
           L+L   MQ    + +     +V  AC
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISAC 549

[Close]

BLAST of Chy3G050450 vs. TAIR 10
Match: AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 3.5e-75
Identity = 167/497 (33.60%), Postives = 268/497 (53.92%), Query Frame = 0


Query: 109 VHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDL 168
           VHA  ++   +  IYVG++L+S Y +   +  A KVF+ +  ++ V W A+I GY     
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408

Query: 169 TEEALALFSDSVKNGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRG-NLIVDSA 228
           + + + LF D   +G   +   F  +L+ CA   D E+G Q H +I+K     NL V +A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468

Query: 229 IIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDGFLPN 288
           ++  YA+C  +  A   FERM  RD V W ++I S  Q     EA  +F  M   G + +
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528

Query: 289 EFSVCSVLKACGEERELKIGRQLHGLIIKKIIQNDVFVGTSLVDMYAKCGNLADSREVFD 348
              + S LKAC     L  G+Q+H L +K  +  D+  G+SL+DMY+KCG + D+R+VF 
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588

Query: 349 GMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLT 408
            +   + V+  ++IAGY++  L EEA+ LF+ M  + +  + +T  +I+ AC   E+   
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 648

Query: 409 GREVHAQIVKNSFQT-NIHIGSTLVWFYCKCRNQLKA-SMVLQLMPLRDVVSWTAIISGC 468
           G + H QI K  F +   ++G +L+  Y   R   +A ++  +L   + +V WT ++SG 
Sbjct: 649 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 708

Query: 469 AHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNV 528
           +  G   EAL+F K M  +GV P+  T+ + L+ C+ + ++ +G+ IHS     +   + 
Sbjct: 709 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 768

Query: 529 FVGSALIYMYAKCGYVTEASQVFDSMPVR-NLVSWKAMILCYARNGLCREALKLMYRMQA 588
              + LI MYAKCG +  +SQVFD M  R N+VSW ++I  YA+NG   +ALK+   M+ 
Sbjct: 769 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 828

Query: 589 EGFEVDDYILGTVYGAC 602
                D+     V  AC
Sbjct: 829 SHIMPDEITFLGVLTAC 844

The following BLAST results are available for this feature:

BLAST of Chy3G050450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WNP3	2.2e-199	63.02	Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidop...	[more]
P93005	9.5e-78	32.82	Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX...	[more]
Q9LFI1	2.3e-76	33.20	Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop...	[more]
Q9SS83	4.9e-74	33.60	Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop...	[more]
Q3E6Q1	4.9e-74	30.24	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]

BLAST of Chy3G050450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSX2	0.0e+00	98.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403710 PE=4 SV=1	[more]
A0A5D3C5K1	0.0e+00	95.35	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B3M7	0.0e+00	95.19	pentatricopeptide repeat-containing protein At4g18520 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1FJ52	1.9e-307	85.06	pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like OS=Cuc...	[more]
A0A6J1JUB8	2.8e-306	84.74	pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like OS=Cuc...	[more]

BLAST of Chy3G050450 vs. NCBI nr


Match Name	Identity	Description
XP_004138810.1	98.87	pentatricopeptide repeat-containing protein At4g18520, chloroplastic [Cucumis sa...	[more]
TYK06655.1	95.35	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008441245.1	95.19	PREDICTED: pentatricopeptide repeat-containing protein At4g18520 [Cucumis melo]	[more]
XP_038884364.1	88.82	pentatricopeptide repeat-containing protein At4g18520, chloroplastic-like [Benin...	[more]
KAG7015915.1	85.06	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of Chy3G050450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18520.1	1.6e-200	63.02	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G33680.1	6.8e-79	32.82	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53360.1	1.7e-77	33.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G11290.1	3.5e-75	30.24	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G09040.1	3.5e-75	33.60	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 154..186 e-value: 0.0011 score: 17.0 coord: 456..490 e-value: 1.7E-7 score: 29.0 coord: 254..288 e-value: 4.3E-7 score: 27.7 coord: 557..590 e-value: 1.4E-5 score: 22.9 coord: 126..152 e-value: 6.7E-4 score: 17.7 coord: 355..388 e-value: 3.0E-7 score: 28.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 453..502 e-value: 5.5E-13 score: 48.9 coord: 251..298 e-value: 2.8E-9 score: 37.0 coord: 352..399 e-value: 3.0E-10 score: 40.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 126..151 e-value: 0.0014 score: 18.7 coord: 557..587 e-value: 1.3E-6 score: 28.3 coord: 529..555 e-value: 0.0087 score: 16.3 coord: 154..184 e-value: 3.3E-4 score: 20.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 555..589 score: 10.566751
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 152..186 score: 9.371969
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 252..286 score: 11.268274
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 353..387 score: 11.684803
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 454..488 score: 12.287675
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 271..407 e-value: 5.3E-29 score: 103.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 97..212 e-value: 6.1E-16 score: 60.3 coord: 515..615 e-value: 1.8E-18 score: 68.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 409..514 e-value: 1.9E-11 score: 45.8
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 100..298 coord: 272..501
None	No IPR available	PANTHER	PTHR47924:SF2	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 395..602 coord: 170..400
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 395..602 coord: 170..400
None	No IPR available	PANTHER	PTHR47924:SF2	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 100..298 coord: 272..501

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G050450.1	Chy3G050450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding