Chy3G049910 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G049910
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	50S ribosomal protein L18-like
Location	chrH03: 116907 .. 129320 (-)
RNA-Seq Expression	Chy3G049910
Synteny	Chy3G049910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTCACAGCAATAGCTTCTTCACTGCCATCTTGTTCTTCTGTGTTCTCCTCCCAGGGGCCATCAACTCCATTACAAAAATCCTCGTCTCTATCGTGGGCATCTTCATTTCCGCATGTTAGCATATTCAGAGGCTCTCCTTTCGCCTCTTCTAATTCCTCGTATGCCAAGGTACAATTTCTTCACTGCCATCCTACTTCATTCCCTACTATTCGGGAGGATATCTTAGTTACATTTTGAAGTTTGTGATTTATCGATTGTGGAGCACGAATTTCTCTATTGTTGTTCACTTTTGTTGGGAGAAGCAGAATTTTATGCGACAAAGTTTAATCTGTGGTTGGTTTGCTGCTAACTGTGTATTCAAGCCAATAGTCAATATGAACTCAGCCATATCGCAACTTTCCTTGAACTTGCTGCATAGTAAAGGAGAGAAAGAATTGCGTGATAATTTATAAAGAATTATCATGATTACTTTTCAGGATATGTTTTTAGAATTTAAAGGAATACTGGGTGCAATCATTTTCTGAGAATAGTCTTGCTGTTATTATGGATGAAAGACAGAAATGAGCGTTCCATGGAATACAAGAGTTCTCAACTATTTTCTGCTTTGTTCTAGGTCAAATGATTTCATTGCTATTGTTGAGTAGTGCCCCAATTCCACTTCTTTCAAATACTTCGTTTTCGACCTTCTATTTTAGGTGGGTGTGAAATTGCGTACAACATTTTGAACTTAGAAATTTTCCTGATAAATGACAGCCAACTTTTTGAACCCAGGACCATTTAGTTAAGTCTGCGAGAAGTTTTCTCTACGTTAACATCCTTGACTCAGCTAGGCTACATTAACAATTTTCCAACTTGAAATGTGGAATATTCAGGAAGATTTGCATTGAACATGAATACTGCTTTATTGAAGAAGAGGAAGAGAGAACCCCCTTTTGGACCACATACCAATGTTTATACAACTCATAGTTAAACTCTATACAACCCACAACTAACACCACTGAACCACTACTTATTTACAGACAAGAAAAACACAACTAAAACAACACATACTACTATGAAACTCAAGATAAACGAACAGATAGGCGGATAAGGTCAGGCGCCGCGCACCAGGTCCACAATCTCTACTTGGAAAGTAAGAAAACATTTTTTGAAAGAGTGAGCTAAATCTCAATAAGTGACTAGTTTTAAAACAAACATGCTTTAACAAAACAATGAGTAGTAAACTGAACTAGCATAAAACATACAACACAGGAATATAAACAACTTATATTAACACGGAGTGTAGCCCAACTTACAACAACCAAACAAGTCTGATATAGACATAAAACGCTATCATTGTTACACGACTTTCGTGGTGGTTATTTTCGTTGGTTTAATCAGATTATTGTTTCAAAAGTTTGTTGGTAGCTAGCAAGCTTGGTATCAAGTTTAAAACACTTGCTATGGCTTGTGAATATGTGATTGTGAGACTTGCTAGCTACATGGATAATAGAACTTGTGTCAATCTTCAACCTTTGGCTTTTCTTCCTTTTGAGGCTAGAAGTAATGTTACTGTGGTTTGGGGATGCTTGGGGCATGCGGCCATAGGCAAACTGCACCCTAGATAAAATGTCCTAAAAGGCAAGGCCAACTGATTATTGAATGCCATTGTGCTCTAGAAGAACTTAAGTTCACACGACATTTCGTGATGGTGGCAGAAGCTTGGAGAGGGCAGAGAGGAGGAAAACGAGGAGGCTACATCATAAAAAATAATATTGTAATGATTTTGTCAAATCAAGCATGCACAATGTTACGTGCTTGACCTTGCTTGCTTTGATGCAATGTAGGGGCACAAACAGTCGAGCTTTGCACGGGCTCGCATGCCTAGGACGCGTGAGTGGTAATTCATTAGTTTGGGTTGGCAGGCTCGAGGCTCAGGTATCAAACTATCATTGTTGGCTCCTCCTCATTGACGGTCGAACGAAGTTTGAGTTCGAGTGGCTGCAATGGTCGGTTCTTGCTCAACGAACCCCATTGCCCGCGTCGCATCCCGCCCTAGTTGTCAAGTCAGGTTGTACTGGCCCGTGTTGTCTATGCTCACTCTCTCGGATGGAATGCATTCAGTGGCATGATATGCTTGGGAAGTCTCTCGAGCGTTTTGTCTCTACTCATTGCTCGAACAAATGACGTTGCGTTGCTCCATCATCCTACGATGCTGGCATGCATGCGGGTTGCAACGTTGTGTAGGAATGCTACCTAGTTGATCCTGCCAGTAGTCATATGATTGTCTTTGAGATTAAGCCATGCATGTGTAAGTATGAACTAATTGAGACTGCGAAATTGCAAATGACTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCAATAACCATGGTAATTCTAGAGCTAACACGTGCAACAAACCACGACATTTGGAAGGGATGCATTTATTAGATAAAAAGTCGACGTGGGCTCTGCCCAATCTCTAATGATTCATGAGAACTCGCAGATTCACGACCATCGTGCCAGTGGTGCACATTCAAATTTCTGCCCTATCAACTTTCAATGATAGGATAGTGGCCTACTGTCAGACTTGCCTTCGTGACATCTACTATGGTGGTGATGGAGAATTAGGGTTCGATTTTAGAGAGGGAGCCTGAGAAACGACTACCACACCCAAGGAAGGCAACAAGCATGCAAATTACCCAATTCTGACACGAGGCGGTTGTGACAATAAATAACAATACTGGGATCTTTGAGTTTGGTAATTGAAATGAGTACAATCTAAATCCCTTACCGATGATCAATTGGAGGGCAAGTCTGGTGCCAGCAGCCGTGGTAATTTCATCTCAGATAACGTATATTTAAGTGTAGTTAAAAAGCTTGTAGTTGGATCTTGGGTTGGAAATAAGCAAATCACAATGCTCTTCACCACTAAAAAGAAAAAGGATAGAATGATGAGATCTATCTGGGCAAGAAAACTACTCTATGACCAGACTTGCTACAAGCAACTCATGGGGTTCTACATTTGACATGAAAAGTGAAACAAGTTTTGTTTAAGTATAGTAACTAAGTTACTCAAAGGTAAAAAGGTAAGTTCTCTCTCCTCTCTTCTCTTCTTCCCCTTTGTTCCGTCACTATAGTCCTTGGTGAATCTCAGGCGTCTTCAACAGACTCATAAATGCAAGTGAAGAGTTGCAAGATCGTTGACTCCTACTATATTGCATATGGTTTGAGAAGGGGTTGTTCCGCATTGAAGATGTAGATTTCCAAAAAATCCACAGTATATCTAAGCACCAACTCAAATGGCTTGTTGATTCACTTTTGATTCTAGTCAAAGAGCTAGATTGGAAGTTCTTCATCAAAAATGAAAACGATGGAAGTGGAGCAACAAGATTGACCAAATTCTGAAGCCTATCAGGTTGGTTTTTGAGGTGTCGCTGGAAGTGCCTCCGAATTTATTCACGTTTTCTCATGAGTTTCAAAACAAGGATGGTTCTCTTTCCTGAATATGATAAAGAATTCTTTTATGAATTATGACCACGTTATGGCATTCCACACTACACGTCGACTCAAATCACTTAAGGTCACGGACATCCCACCTCCCAAAATCAGGTTCAAGCTATGCAGATAAAGTTAAGTCTTCAGTGAATGAACCATCCTCTGTTCTGATTACTGAAAAACAGAGTACGACTACTGTTTCAAAAAATCCTAGTTAATCTTCAAGTGGAAGACAATATGTGAAGTAGTTGGAGCAGCAATATTGAGTTCGGAAAAGTGACGATATCCTTGATGAAGATCTCAATAATTTGTGGGTTTTAACAAGATTATTCATTTTTTATGATTGGACGGACATCTCTACTTTCCTAGAAGACTTGTTCCAAGTTAAAATCAATATTAATCCATTATTTGCAGACAAAGTTATCATCAAAGTACCCAAGGAAAGTTAGAAGGAATGATTTACTCCCAGGCCAAATGGTTTAATTATGAGAAATACCATTTGTTATTTGAAATATGGAATGAGGCCAAACACAACAAACCATCACTTATTGAAGGGTTTGGAGGATGGTTATCAATCAAAAATGTCTCTCTCAACCTGTGGAGATGAGATATCTTTTGAAGTTATTGGGGCCTACTTTGGAGGGTTGGAAAGCATAGCTTTAGAAACTCTTAATCTTATCAAGTGCTCTAAAGCAAGAATTAGAGTTTAGAAAATTCTATGTGGGTTTCTGTCGGCAACAATAGAGTTGAAGAGTGAAACCAGAAGGAATTTTTTTTTCTTAATTTTGGGGATTTTGAACCATTAGAAGTTCCCAATATTGTTAAAAATGACTTATTTCACAGTGGTTTTTCCAATCCAATTGATTTATGCACATGGAATATGGTGGTCGTTGATGAAGATGTTCAAGTGGATCTTTCTTCAGGTAATTGGGATTTCCTTAATCAGAATGCTCCATCTATCTCAAGGAACCCATTTGAGGCTTTAAAAAAATGGGGACGATGAACTTGATTTGCAGGACATTGCCAAAGTCATTGATCCCTTGTTGGAAAAGACAAATGATTTCAGATGGCAAAATTCAATCCAGTGCATAGTTGGCCATCTAGCACGTGAAGAGTGTCAAAGGCATTGCTTGAAGAGAGAATTTTTGACTTCGAAGAAAGAGAAGGAAGGCGATAGGTTTATTAAAGATTTTAAAAAACAGTTCCCCTCCTTTTGAACTTTCAAGTTCCCTCCACTTCGACGATTTGTTGCCTCTTTACGAGGTGTCACATGTATGGTAGGCTTGACAAAATTTATTAATGAAACAACTTTTGGAAGAAGTACTCCTTCAGGTAATTCACTTTTCCTCCATCCTTTGTTCTACGGTCTCAATCGAAACTTTCAGATAAATCCAAGAAGAAAAGCTCTACCGTAAAGAAGGTCTCTTCCCGTGGGGCCGTTGTTCAAGCAGGTACCTCTAATTTCTTAAGTCTCATCAGCATAAATAGTAAGAAACTATGGATACTTGATTCAGGGGCTACAAATCATTTGACTGGATCCTAGGATAATTTTCAATCAATTCTTTTGAGTGCTAATAATGAAAAGATTTGGATTGTTGATGAGTCCTTTGCCCTTATTGCAGACTAGGGTCATATTTCTCTCTATGATGGTTTAACTTACAAAACGTGTTGCATGCACCCAAAATATCTTATGATTTACTATTTATGTCACACCCCCTCCTAGATCATCTACTTTAGATCCGAGAGACGTCGTGAAGTCAACCGACATCGTTCCCCTCTGAACGATACTAGCCGACCCTTAACCACCGACCTCTAAACAATATGCAAGCAGAAGCCAATAACATTAACATTTAAACAAAATTGAGATGCAGCCCATTTAGAAAACAACATTAATAAACAAAATAATCTTTCAGAAGACCTTTAACAACTTTGATTTTCTTGAGTATCGATAGCTTACCTACCGTTGATTCTAACTCTGAACTATGTAATTTACCGAATTTCACAATAGACTGAAAATATTCTAACAACTTCTTTAAATCATTAACCACTGATTGGCCCGTAGTAGTAAGCTCAACACTCAGAGATGCACAACTTGTACCTGAAAAGTTGAAAAACATTTTGAAAGGGTAAGTCGAAAGAAAGGAGGAAAAGATACGTCTCTAGAGGTGGAAGACATACCTTGTGCAACTCAGTTTTGGTTAGTCTTCCCACATACTACCTATCTTTATTTTCAATTCTTGAAAAGTTGGCTGCTGCTTTGGTGAGAATTATGTGGAATTTTTTTTTGGGAAGGTCATGTCGGCAGCAAAATCAACCACCTTGTTAAGTGGAACAAGGTTTCATCTCCTTTAAAAGATGGAGGTCTCGGCCTAGGAGGAATTTTTTTTTGAAAAGGAAACGATTTTCAATATTATTAATAATGAAAATAGAGAGACAAAGCTTAAAGTACATGAGGGACATACAAAGAGCAAAGGGGGAGGGGGAGGATCAGCAGGCGCACCCAGGCATCTCAACTAGGTTGACACCCCCTTAGCGCCCTCATCACATCCATAAGCGAAAATAAAAACCTCTCGGCCTAGGAGGAATTAAAATTCATAATACTAAATAGGGTTGGCGATACTCAAAAGAAGAGTCAGCTCTTTGGAGGAATGCTTTTCTTAATCAAGCCTAACTGTTGCTGGTTCATTTTCTCCGTTGCAGTTTTTTCTGACCAAAGTTTTGAAGATTTGAAGGCTTGTTCTTGTTTATTTTTATTTTGAGATTGTATTGTTTTTTGGGGTTTTTTCTGAATTTTTTGTTCATTTTTTTACAGTTTTTTCTGGTCCCTTGTAATAGGCTGATTGTTATTAGGTTGCTCCTCTATTGGTTTTTGTGTTGCTTTGATGTTTTCTTTCTCGAGATATGATGATTGGCGCTATGGAGGTGTCAACCTAGTTGAGATGTCCGGGTGCGCCTCTTGATCCTGTAGTTTCCCCCTTTCTTTTTCTTCTTTATTGCTTTCTTTGTATGAATCTCTTGTACTTAGAGTTCTTATTAATAAAGAAGTTTTTGTCTCTGTTTCAAAAAATATTTAACAGTTTAGCATAAAACCTGCGCTTTAAGAAACATTCGGCAATAGGAAATCATTTCGTAAACATAGTACTTGAAAACATGTAAACTTTTGATAACATTTTGTAGATCTTTTGTAAATCATGGATCCATAGCCTCAGACAATATTAAACCTCTTCATCATAAGACGGACAGTCTATAGGATACAACTTTTACTGCTTCTCCTCCTCCTTAAAGGCATAATAAAGTATACCCTTCCTGATGTCCCATAGTTAAATAGGCTTGTCAACCCTTCCACCAGTACGAAGTTAACCACATGTAGGTTAATTTCAGTGTATTCAGACCTAGGATAAAACATACTTTTGCTTTCATAACACGTAGTCATAGATATACTTTTGAACATAACATGGATTTGGAAATCAGCTTGTAAATACTTAAACATTCATGCCTTGCAAATTCAATAGAAATCAATAAACTTAAATATTTTTCTTGAAACATGCTTTGAAACTATAGCTTATAAATCATGCTTAGAAACCAGTTCAAAAATCTATTTGTCACTTCCTATACTTGGTTTAACCCTTGGTTCAGAATTTCCTCCAAATTCTTTTTGACCTGAAAAATCCATATTTGAGTTTTAATAATTTCCTTGACCATGAAAAATAGTAAAATTGTTCAAAAATCAAAATTATCAAAACAACCCAAAAATGACCCATTTTGGCATGCCGACGCGCTGTGGCACGACAACAGGACTTGGTGCGCGCATAGGGCCTGGGTAGGCCTTGTCGCGTGTTAACCTCACAATGAATGCGCCGCGCGCCTTACATGCGTTGTCCTTTGTGTGCGGGCGTCCTCGCGCACTAACCTCTGCGTGTTGTTGTTTGAAGCAATGCTAAAGCTGAATACAGAGCTACGAGTTTGTGAATTTGTGAAGAAATTTGGTTGAAGAAAGTTTTGTCTGATCTTACCAAGACCATGTTTTACATATGAAACTATATTGTGATAATAAAGCGGCTAAGCATAGCCAATAATCCTATACATGATAGAACGAAACATGGAAAGATTGACGAACAGTTTATAAAAGAGAAACTGGACAATAGCAGTATATGTATTCCATATATTCCATCTTGTCAACATGTTGCTGATGTTCTCACCAAAGGGTTACTCAGGACAAATTTTGATTCATGTTTTAGCAAATTGGGTTTGATTGACATTTTTGCTCCAACTTGAGGGGAGTTTTGGAAATAAGAGGCTTTGTTGATAATTTAAAGCCTCGAGGGTATGTAAGTATTTAGTTTACCCTAAGTTTATTTCTTTTTTGTATTAGGGCTTGCTAGAACCTATAAAGTTGTCTTCTTTTGTAACTTTCATTGTGTGTGAAAATAATAGAAGAGACTCTCTATCGTGGTTTTTTCTCTATGTTCTAGAGTTTTCCATAGAAACCTTGTGTTCTCTTCTCTACCATTTAACCGTAAATGTGCTCTGTTTTCTAGCCCTCAAAGCATAGGAGAAATTCAAACTCTCAGGAATGTTATTGCTCTGTTTTCCAAACCCTAAACAGAGGAAATTGAAAGCGTCTTTTTCTTCACCATTTCTACATAACTACTCTTTTGGGTGTGCACATAACTTTTCTCATAGACTTCCTGATGCTTATTAGCTAAAAATGAGGTTGAAGTTTGTGTTGGAAGTTGCCTTCTAGCACTTTGTCACGAATACCATTTTATACATTCCAATTTCAATAAAAACAAAACTTTCCAGCATTCTAAGAAAGGCCCAACCACCCCTGTTAGCTTCCCTCGAAAGGTGCCTGAATGAAGAAACGGCCACCTGAAGCTGGCCTAAAGTCACAACTTAGATTCCAACCATTTCCTAATCTGAACTTCGAAAGGTTCAAATTTCCATGGTCTACCTCCCCATGTCTCAAAAAGAACCAATCTTCAGGGCCTCTTAATAATTCTGCTAAAGCTTCCAAATACCATCTCAGATGTGTTTCTGAATCTAACAAAGATCTTTGAGCTTCCACATCCTCTATGTGACAGCATCCATTTTTCGCCCAAATACAAGATTGCCTTGACAGCATTGCACCAAGGCAAGGATGCATTTTCCCCCATAAACAGACCAATAATGATATGAGGGTTAATTGGGTAATTAGGTAATATTCCAGGTTAATTCCCTTTTTACCCCCAATTGTAATAGAACTCTATAAATAGGAGATTTCTCCTCTTGTATAAAACACATTATTCATTTTAATAAAAAAATCCACAAACTTGGTTCTTGGAGGATGTCTTCTTGGGGTTACTTAGGCTACATCAATTTGATATCAGAGCAACCGTCTGGCCTAACATTGACTGTCGTCGGTGGAATACCAGAAAATTCTTGTTGACGCCGATCACGGAAGGGAGCTTTGAGTGTTGTGCTTGTTTCCAAACAATGCATCTAATTAGGGGGAACTCTTAAAATTTCAAGAAAGAAAGAAGACACCAAAGATTTATCAAGATTTTTCAAGAATGAACTTCTATCAATCAAAGAAGATGTCCAAGAAAAAAACCAGCAACAGGTATAGACAAGAAAATCAATTTTACTCCCATAAACAATGTTTGAGTTCTGATTCAAGTTATTCGGAAGAAAAATTTCAACATTCCAATTTTGGATTCTAGTGACTCCAATGATGTTTCTAAGGCAGTTTGGGACGGAATAAGAAGGTGACAATATCGAAAAATGGCCCAACGATCCAATCAAACTCATTTTTTAAGAAATCAACATAAAGATTGGAAGTTGGATGAATTAAAGATTCGTCAAGAATCATCAATAAGGGATTTTTACCATCCAAGAAGAATGTTCAAGGCTAAAAAATACTCTTTTGGTTATGAAACACGATCAAGAAAGATTGATTCAAGAAAATCATTGGATGAGTCCTATCCCTGCTATGAAATTGAAACACGTTCAAGAATCCAACAAAATGACAACTAGATCCCATAGCATTAGAGGAAATAAAGAAAGCAATAAAAGAAATTCAACGTTCATTGGGAGAAATGACTAACATATCAATCAACTATCAATTCATTTGCAAGAGTTCAAGAACGGATTGGTTTCATATACGAAAGAAAAAACAAAGTAATCACGCTTGGAAAATTTTCAAATAGAAAAATTTTGAAGATAAAATTGAAGAACAAGAATTTGATAATGTTGATTTAGAAATGGTCATAAGTGAGGAAAAATCCAACAATGAAGATGAAAAAGAAGTATCGAATACCGGGCAAAAATTGAACAAGAACAACGACACATTGGTTGCGATGGAAGTGAATCTTCAAACCATCGAAGAACTTGAAGCGAATGATAAAGAAAATGTGATTCTTGAAGGATTTTCTTCAAAAGCTAATTCTTTTGAAATTGATTCTTTGAATACGGTTTTGAGTGAGATTGGAGGAAACATCTTTTTCGGGTTTATGGCCGATGGAGAGATTCATCTTTTAGTGGCCATATTTGATTTTTTGTCTCGATTTTATCCCTTCGATCATAATATTTTGGTTCAAAATGTAGGAGATTGGTTTGGTCATACTTCGTTGAACAAGTTTATTTCATTCTTTTTTTCCTTTTTTTGCTTCATAAATATCTTCTTTCTAAAACTCGGGACGAGTTTTCTTTTTGGAGGGGTAGAATGATGTAAGAAGACTAAGGGTTAATTGGGTAATTAGGTAATTAGGTAATATTCTAGGCACCGACAGATTTAGTATAGGCCCGGGGGGCTCGAGCCCCTCCTCAATTTTATCGTCTTTATATAATATGTGTATAGAAAACAAATTGATATTTAATATTTGTAGTAACTTAGTGGTAACTATGCTTGTCAGTCCCCTTTCCAACCTAAGTTCAAGTCTTGTCTGCGTAGTTTTTTTCTTTAGATTTTTATTTTTTCTTTAAATTACAACTCGAAGCCCCCTGTCAATAAATTTTATGGATCCGCCGTTGATTCTAGGTTAATTCCCTTTTTTCCCCCAATTGTAATAGAACTCTGTAAATAGGAGACTTCTTCTCTTGTATAAAACATATTATTCATTCTAATAAAAAATCTACAACCTTGGTTCTTGGAGCATTTCTCCTTGAGGTTACTTAGATTACATCAAATAAGTAGTCTAATGTAATTCTTGCGGCCGTTATCAAGGGACCAGCTGAGATTAAAGGTGTGAAAGATCTTACTCCAACACTTGGCAGCATAAACGCAATCGAATAATCTGTGTTGTAGATCCTCATGAGATCTAAGACAAGATGGACAAATATATGGCGAAATATAATGAGTGGGTAGTTTTCTTTTGGATAACTGAAGCACAATGTAAACTCCCCAACAACATAACCCATATGGTTATATTCACCCTCCTTGAACTTTTAGATTTCCCAAGGCATCCTTTCCATCTGTGGGTCCAACGGGGAGGTAGGAGTCAAAGTGTTCTGATAGTGACTTTACTGAAAAAACCCTATGAGATTCCAGTGACCAGCTTTTTTATCATAGAAATTGGATAGACTTATCCTGTCCAAGGATTCAAGGAGAAGTTGAAAATTAGAGATTTTCTCCTCTTTCAACAATCTTCTGAAATTAAGAGATCAGGAAGAGGTGGAGGAATCCGAGTATTTGGAAACTGAGCCTTGAGGAAAAAGGGCTATTCTGAACAGACTTGGAAATCTGGTCTTCAAAGCCATTCTTTCCAGCCACAGATCCAACCAAAACAAGATTCTACCCCCCTTCCAACTTTAAATAGTATATGATGGCAAATATGCAAATCTATTACTTTTTGTTTGAGGTCAGCATGCCTTAACCCTAAGTTCAAGTTGGCAATTGTTAAATTTTTAAGTGGAAGCTTTTTCAAAATAAGTAATGTTTTTTTTGTATTGTATTATGAATAAAGTGGAAGTTTGAACACATGACAGTATAGTTACTAAATGCCTAGTTATTTGAGCTAGGCCAAATTTGAGAAATTAAAGAGTTAAGCTCTGGTACCACATACAATAAAAGAAAGAGAACTATTATCTTGGAAATTATGTGAAAAGCTCGGTGCAGGGCATATCAATAAGTATTAATTTTTGAAGATAACAAGATCACCTCATGTCATGATGCAAAAATACAGGACAAACAGATAACAAAAAAGATTGTCCAAGAATACAAGTAAAAGAAAGGAAAATAGAATAGAAATTACTGTGGTAATAACTAAAATCACTGCTCTTTTTAAAGGGAAAAATATTACAGATATACTCGTTATCTCATGCATTTTTTCTTTATTTTAAAAATAGCAAGCCCATGTTTTTCTTTTTCGTTGCTAGCTTTGGCTGGACACTGTATAGAGCAAGGCCTACTTTACTTATAGCAACGTCAGCGACATTTGGTCAATAATCCATACCTGTTTGTATTCACTCTTTAAACAGAATCAGATAACTGTTGAGATTTGTATTTCTTTTGTTAAAAGACCAGCATGTTTACACTTGTAGGTTCTATTTATACAATCAGCTTGGACAAGAAGGTCTCGAGAGGAGGCTGCAAACCGACCAAACAAGAAATCATGGAAACAAAGGACAGATATGTACATGAGGCCATTTTTACTAAATGTTTTCTTTTCGAAGAAATTTATCCATGCAAAGGTAATGCATAGAGGAACCAGCAAAGTGATATCAGTGGCGACAACGAATGCAAAGGACCTTAGAAACATTTTACCATCACTTACAGATCACAATGCATGTCGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATTTCGTATGAGCCTAGAAAGGATGAAAGAATTGAAGGTAAACTTGGCATTGTTATTGATACCATTAAGGAGAACGGGATCATGTTTGTACCTTGA

mRNA sequence

ATGGCCTTCACAGCAATAGCTTCTTCACTGCCATCTTGTTCTTCTGTGTTCTCCTCCCAGGGGCCATCAACTCCATTACAAAAATCCTCGTCTCTATCGTGGGCATCTTCATTTCCGCATGTTAGCATATTCAGAGGCTCTCCTTTCGCCTCTTCTAATTCCTCGTATGCCAAGGTTCTATTTATACAATCAGCTTGGACAAGAAGGTCTCGAGAGGAGGCTGCAAACCGACCAAACAAGAAATCATGGAAACAAAGGACAGATATGTACATGAGGCCATTTTTACTAAATGTTTTCTTTTCGAAGAAATTTATCCATGCAAAGGTAATGCATAGAGGAACCAGCAAAGTGATATCAGTGGCGACAACGAATGCAAAGGACCTTAGAAACATTTTACCATCACTTACAGATCACAATGCATGTCGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATTTCGTATGAGCCTAGAAAGGATGAAAGAATTGAAGGTAAACTTGGCATTGTTATTGATACCATTAAGGAGAACGGGATCATGTTTGTACCTTGA

Coding sequence (CDS)

ATGGCCTTCACAGCAATAGCTTCTTCACTGCCATCTTGTTCTTCTGTGTTCTCCTCCCAGGGGCCATCAACTCCATTACAAAAATCCTCGTCTCTATCGTGGGCATCTTCATTTCCGCATGTTAGCATATTCAGAGGCTCTCCTTTCGCCTCTTCTAATTCCTCGTATGCCAAGGTTCTATTTATACAATCAGCTTGGACAAGAAGGTCTCGAGAGGAGGCTGCAAACCGACCAAACAAGAAATCATGGAAACAAAGGACAGATATGTACATGAGGCCATTTTTACTAAATGTTTTCTTTTCGAAGAAATTTATCCATGCAAAGGTAATGCATAGAGGAACCAGCAAAGTGATATCAGTGGCGACAACGAATGCAAAGGACCTTAGAAACATTTTACCATCACTTACAGATCACAATGCATGTCGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATTTCGTATGAGCCTAGAAAGGATGAAAGAATTGAAGGTAAACTTGGCATTGTTATTGATACCATTAAGGAGAACGGGATCATGTTTGTACCTTGA

Protein sequence

MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVSIFRGSPFASSNSSYAKVLFIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENGIMFVP*

Homology

[Close]

BLAST of Chy3G049910 vs. ExPASy Swiss-Prot
Match: Q5P316 (50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rplR PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 32/93 (34.41%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 96  LNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEA 155
           L VF +   I+A+V+    S+V++ A+T   D+R+ LP+  +  A +V+GKLIAER+K A
Sbjct: 26  LTVFRTNSHIYAQVIDGSGSRVLAAASTVEADVRSQLPNGGNKQAAQVVGKLIAERAKAA 85

Query: 156 DVYAISYEPRKDERIEGKLGIVIDTIKENGIMF 189
            V A++++ R   +  G++  + +  +E G+ F
Sbjct: 86  GVEAVAFD-RAGFQYHGRVKALAEAAREGGLKF 117

[Close]

BLAST of Chy3G049910 vs. ExPASy Swiss-Prot
Match: A9BG02 (50S ribosomal protein L18 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) OX=403833 GN=rplR PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06
Identity = 34/118 (28.81%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 79  NKKSWKQRTDMYMRPFL--------LNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRN 138
           +KK+ +Q+  + +R  +        L VF S+K I+A+++       ++ A+T  K L+ 
Sbjct: 6   DKKALRQKRHLRVRKNVRGTSEKPRLTVFKSQKHIYAQIIDDTKGVTLASASTTQKQLKE 65

Query: 139 ILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENGIMF 189
            L    D NA + +GKLIAE++KE  +  I ++ R   +  GK+  + +  +E G+ F
Sbjct: 66  KLEKTWDENAAKEVGKLIAEKAKEKGITEIVFD-RSGYKYHGKVKALAEAARETGLKF 122

[Close]

BLAST of Chy3G049910 vs. ExPASy Swiss-Prot
Match: A5FZU9 (50S ribosomal protein L18 OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=rplR PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.1e-06
Identity = 35/117 (29.91%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 72  EEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNI 131
           E  A R  +  ++ R   + RP  L+VF S K I+A+V+     + ++ A++    LR+ 
Sbjct: 6   ENEARRRQRLRYQIRLKAHGRP-RLSVFRSGKHIYAQVIDDAAGRTLAAASSLDAGLRSA 65

Query: 132 LPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENGIMF 189
           L +  D  A   +GKL+AER+KEA V  + ++ R      G++  + +  +E+G+ F
Sbjct: 66  LKTGADKAAAAAVGKLVAERAKEAGVTQVVFD-RGAYMYHGRVKALAEAARESGLDF 120

[Close]

BLAST of Chy3G049910 vs. ExPASy Swiss-Prot
Match: B7L0T4 (50S ribosomal protein L18 OS=Methylorubrum extorquens (strain CM4 / NCIMB 13688) OX=440085 GN=rplR PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05
Identity = 29/93 (31.18%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 96  LNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEA 155
           L+VF S K I+ +V+     + ++ A++  KDL++ L +  D  A   +GKL+AER+K A
Sbjct: 29  LSVFRSSKQIYVQVIDDAAGRTLAAASSLDKDLKSSLKTGADKAAAEAVGKLVAERAKAA 88

Query: 156 DVYAISYEPRKDERIEGKLGIVIDTIKENGIMF 189
            V  + ++ R      G++  + D  +E G+ F
Sbjct: 89  GVTKVVFD-RSGYIFHGRVKALADAAREGGLDF 120

[Close]

BLAST of Chy3G049910 vs. ExPASy Swiss-Prot
Match: A9W4S4 (50S ribosomal protein L18 OS=Methylorubrum extorquens (strain PA1) OX=419610 GN=rplR PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05
Identity = 29/93 (31.18%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 96  LNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEA 155
           L+VF S K I+ +V+     + ++ A++  KDL++ L +  D  A   +GKL+AER+K A
Sbjct: 29  LSVFRSSKQIYVQVIDDAAGRTLAAASSLDKDLKSSLKTGADKAAAEAVGKLVAERAKAA 88

Query: 156 DVYAISYEPRKDERIEGKLGIVIDTIKENGIMF 189
            V  + ++ R      G++  + D  +E G+ F
Sbjct: 89  GVTKVVFD-RSGYIFHGRVKALADAAREGGLDF 120

[Close]

BLAST of Chy3G049910 vs. ExPASy TrEMBL
Match: A0A1S3B2Q8 (50S ribosomal protein L18-like OS=Cucumis melo OX=3656 GN=LOC103485371 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.7e-95
Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVSIFRGSPFASSNSSYAKVL 60
           MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHV+IFRGSPFASSN  YAKVL
Sbjct: 1   MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVNIFRGSPFASSNPPYAKVL 60

Query: 61  FIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120
           FIQSAWTRRSREEAA RPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV
Sbjct: 61  FIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120

Query: 121 ATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDT 180
           ATTNAKDLRN LPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDE+IEGKLGIVIDT
Sbjct: 121 ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDT 180

Query: 181 IKENGIMFVP 191
           IKENGIMFVP
Sbjct: 181 IKENGIMFVP 190

[Close]

BLAST of Chy3G049910 vs. ExPASy TrEMBL
Match: A0A6J1JHY7 (uncharacterized protein LOC111487153 OS=Cucurbita maxima OX=3661 GN=LOC111487153 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.2e-83
Identity = 170/195 (87.18%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSV---FSSQGPSTPL--QKSSSLSWASSFPHVSIFRGSPFASSNSS 60
           MAFTAI+SS+PS +SV    SSQ  STP   QKSSSLSWASSFP +S+ RGSPF SSN +
Sbjct: 1   MAFTAISSSMPSSASVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPA 60

Query: 61  YAKVLFIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120
           +AKVLFIQSAWTRRSR EAA RPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS
Sbjct: 61  HAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120

Query: 121 KVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLG 180
           KVISVATTNAKDLRN LPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDERIEGKLG
Sbjct: 121 KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLG 180

Query: 181 IVIDTIKENGIMFVP 191
           IVIDTIKENGIMFVP
Sbjct: 181 IVIDTIKENGIMFVP 195

[Close]

BLAST of Chy3G049910 vs. ExPASy TrEMBL
Match: A0A6J1JY30 (uncharacterized protein LOC111489327 OS=Cucurbita maxima OX=3661 GN=LOC111489327 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.0e-82
Identity = 169/196 (86.22%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MAFTAIASSLPSCS---SVFSSQGPSTPL---QKSSSLSWASSFPHVSIFRGSPFASSNS 60
           MAF AI+SSLPSCS   SV S Q PSTP    QKSSSLSWASSFPHV+I RGS   SSN 
Sbjct: 1   MAFIAISSSLPSCSSVPSVLSFQWPSTPTILSQKSSSLSWASSFPHVTISRGSHVVSSNP 60

Query: 61  SYAKVLFIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120
           ++ KVLFI+SAWTRRSREEAA RPNKKSWKQRTDMYMRPFLL+VFFSKKF+HAKVMHRGT
Sbjct: 61  AHDKVLFIRSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLDVFFSKKFVHAKVMHRGT 120

Query: 121 SKVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKL 180
           SKVISVATTNAKDLRN LPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDERIEGKL
Sbjct: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKL 180

Query: 181 GIVIDTIKENGIMFVP 191
           GIVIDTIKENGIMFVP
Sbjct: 181 GIVIDTIKENGIMFVP 196

[Close]

BLAST of Chy3G049910 vs. ExPASy TrEMBL
Match: A0A6J1HH86 (uncharacterized protein LOC111464045 OS=Cucurbita moschata OX=3662 GN=LOC111464045 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.0e-82
Identity = 167/196 (85.20%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 1   MAFTAIASSLPSCS---SVFSSQ---GPSTPLQKSSSLSWASSFPHVSIFRGSPFASSNS 60
           MAFTAI+SS+PS +   S+ SSQ    P+TP QKSSSLSWASSFP +S+ RGSPF SSN 
Sbjct: 1   MAFTAISSSMPSSAFVRSILSSQCISTPTTPSQKSSSLSWASSFPSISLSRGSPFVSSNP 60

Query: 61  SYAKVLFIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120
           ++AKVLFIQSAWTRRSR EAA RPNKKSWKQRTDMYMRPFLLNVFFSKKF+HAKVMHRGT
Sbjct: 61  AHAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFMHAKVMHRGT 120

Query: 121 SKVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKL 180
           SKVISVATTNAKDLRN LPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDERIEGKL
Sbjct: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKL 180

Query: 181 GIVIDTIKENGIMFVP 191
           GIVID IKENGIMFVP
Sbjct: 181 GIVIDAIKENGIMFVP 196

[Close]

BLAST of Chy3G049910 vs. ExPASy TrEMBL
Match: A0A6J1DE20 (uncharacterized protein LOC111020202 OS=Momordica charantia OX=3673 GN=LOC111020202 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.3e-81
Identity = 166/196 (84.69%), Postives = 176/196 (89.80%), Query Frame = 0


Query: 1   MAFTAIASSLPSCS---SVFSSQ---GPSTPLQKSSSLSWASSFPHVSIFRGSPFASSNS 60
           MAFTA++SSLPSCS   SV SSQ    P+TP +K SSLSW SSFP++SI  GS   SSN 
Sbjct: 7   MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNP 66

Query: 61  SYAKVLFIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120
           ++AKVLFIQSAWTRRSR EAA RPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT
Sbjct: 67  AHAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 126

Query: 121 SKVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKL 180
           SKVISVATTNAKDLRN LPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDER+EGKL
Sbjct: 127 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERVEGKL 186

Query: 181 GIVIDTIKENGIMFVP 191
           GIVIDTIKENGIMFVP
Sbjct: 187 GIVIDTIKENGIMFVP 202

[Close]

BLAST of Chy3G049910 vs. NCBI nr
Match: XP_008441144.1 (PREDICTED: 50S ribosomal protein L18-like [Cucumis melo])

HSP 1 Score: 355 bits (912), Expect = 3.06e-123
Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVSIFRGSPFASSNSSYAKVL 60
           MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHV+IFRGSPFASSN  YAKVL
Sbjct: 1   MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVNIFRGSPFASSNPPYAKVL 60

Query: 61  FIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120
           FIQSAWTRRSREEAA RPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV
Sbjct: 61  FIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120

Query: 121 ATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDT 180
           ATTNAKDLRN LPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDE+IEGKLGIVIDT
Sbjct: 121 ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDT 180

Query: 181 IKENGIMFVP 190
           IKENGIMFVP
Sbjct: 181 IKENGIMFVP 190

[Close]

BLAST of Chy3G049910 vs. NCBI nr
Match: XP_038886307.1 (50S ribosomal protein L18-like [Benincasa hispida])

HSP 1 Score: 318 bits (816), Expect = 1.10e-108
Identity = 170/189 (89.95%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVSIFRGSPFASSNSSYAKVL 60
           MAFTAI+SSLPSCSSV      S PL KSSSLSWASSFPHVSI RGSPFAS + ++AKVL
Sbjct: 1   MAFTAISSSLPSCSSV-----RSVPLPKSSSLSWASSFPHVSISRGSPFASFSPAHAKVL 60

Query: 61  FIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120
           FIQSAWTRRSR EAA RPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV
Sbjct: 61  FIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120

Query: 121 ATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDT 180
           ATTNAKDLRN LPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDT
Sbjct: 121 ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDT 180

Query: 181 IKENGIMFV 189
           IKENGI+FV
Sbjct: 181 IKENGILFV 184

[Close]

BLAST of Chy3G049910 vs. NCBI nr
Match: XP_023521951.1 (uncharacterized protein LOC111785799 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317 bits (812), Expect = 6.58e-108
Identity = 170/196 (86.73%), Postives = 179/196 (91.33%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSV---FSSQ---GPSTPLQKSSSLSWASSFPHVSIFRGSPFASSNS 60
           MAFTAI+SS+PS +SV    SSQ    P+TP QKSSSLSWASSFP +S+ RGSPF SSN 
Sbjct: 1   MAFTAISSSMPSSASVRSILSSQCISTPTTPSQKSSSLSWASSFPSISLSRGSPFVSSNP 60

Query: 61  SYAKVLFIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120
           ++AKVLFIQSAWTRRSR EAA RPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT
Sbjct: 61  AHAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120

Query: 121 SKVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKL 180
           SKVISVATTNAKDLRN LPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDERIEGKL
Sbjct: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKL 180

Query: 181 GIVIDTIKENGIMFVP 190
           GIVIDTIKENGIMFVP
Sbjct: 181 GIVIDTIKENGIMFVP 196

[Close]

BLAST of Chy3G049910 vs. NCBI nr
Match: XP_022990182.1 (uncharacterized protein LOC111487153 [Cucurbita maxima])

HSP 1 Score: 315 bits (806), Expect = 5.22e-107
Identity = 170/195 (87.18%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSV---FSSQGPSTPL--QKSSSLSWASSFPHVSIFRGSPFASSNSS 60
           MAFTAI+SS+PS +SV    SSQ  STP   QKSSSLSWASSFP +S+ RGSPF SSN +
Sbjct: 1   MAFTAISSSMPSSASVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPA 60

Query: 61  YAKVLFIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120
           +AKVLFIQSAWTRRSR EAA RPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS
Sbjct: 61  HAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120

Query: 121 KVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLG 180
           KVISVATTNAKDLRN LPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDERIEGKLG
Sbjct: 121 KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLG 180

Query: 181 IVIDTIKENGIMFVP 190
           IVIDTIKENGIMFVP
Sbjct: 181 IVIDTIKENGIMFVP 195

[Close]

BLAST of Chy3G049910 vs. NCBI nr
Match: XP_022993255.1 (uncharacterized protein LOC111489327 [Cucurbita maxima])

HSP 1 Score: 313 bits (803), Expect = 1.55e-106
Identity = 169/196 (86.22%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSV---FSSQGPSTPL---QKSSSLSWASSFPHVSIFRGSPFASSNS 60
           MAF AI+SSLPSCSSV    S Q PSTP    QKSSSLSWASSFPHV+I RGS   SSN 
Sbjct: 1   MAFIAISSSLPSCSSVPSVLSFQWPSTPTILSQKSSSLSWASSFPHVTISRGSHVVSSNP 60

Query: 61  SYAKVLFIQSAWTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120
           ++ KVLFI+SAWTRRSREEAA RPNKKSWKQRTDMYMRPFLL+VFFSKKF+HAKVMHRGT
Sbjct: 61  AHDKVLFIRSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLDVFFSKKFVHAKVMHRGT 120

Query: 121 SKVISVATTNAKDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKL 180
           SKVISVATTNAKDLRN LPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDERIEGKL
Sbjct: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKL 180

Query: 181 GIVIDTIKENGIMFVP 190
           GIVIDTIKENGIMFVP
Sbjct: 181 GIVIDTIKENGIMFVP 196

[Close]

BLAST of Chy3G049910 vs. TAIR 10
Match: AT3G20230.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 236.1 bits (601), Expect = 2.3e-62
Identity = 122/161 (75.78%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 30  SSLSWASSFPHVSIFRGSPFASSNSSYAKVLFIQSAWTRRSREEAANRPNKKSWKQRTDM 89
           S++SW SSFP +SI  GS    S+    K  F+Q+AWTRRSR EAA RPN+KSWKQRTDM
Sbjct: 29  SAVSWQSSFPKLSIEIGS--VISSPIVKKDSFVQAAWTRRSRGEAAKRPNRKSWKQRTDM 88

Query: 90  YMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNILPSLTDHNACRVIGKLIA 149
           YMRPFLLNVFFS+KFIHAKVMHR TSKVISVATTNA+D+R  +PSL D+ ACR+IGKLIA
Sbjct: 89  YMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLIA 148

Query: 150 ERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENGIMFVP 191
           ERS EADVYA+SYEPRK ERIEGKLGIVIDTIKE+GI+FVP
Sbjct: 149 ERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGIIFVP 187

[Close]

BLAST of Chy3G049910 vs. TAIR 10
Match: AT1G08845.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-24
Identity = 53/121 (43.80%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 66  WTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNA 125
           +T +  +++ N     S+KQRT  YM PF L+VF SK+F+ A + HR T + ++VA TN+
Sbjct: 62  YTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNS 121

Query: 126 KDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENG 185
           KD++ +L S  D  AC  IG++++ER+KEADVY  SY PR  ++ EGK+  V+ ++ +NG
Sbjct: 122 KDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNG 181

Query: 186 I 187
           I
Sbjct: 182 I 182

[Close]

BLAST of Chy3G049910 vs. TAIR 10
Match: AT1G08845.2 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-24
Identity = 53/121 (43.80%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 66  WTRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNA 125
           +T +  +++ N     S+KQRT  YM PF L+VF SK+F+ A + HR T + ++VA TN+
Sbjct: 107 YTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNS 166

Query: 126 KDLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENG 185
           KD++ +L S  D  AC  IG++++ER+KEADVY  SY PR  ++ EGK+  V+ ++ +NG
Sbjct: 167 KDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNG 226

Query: 186 I 187
           I
Sbjct: 227 I 227

[Close]

BLAST of Chy3G049910 vs. TAIR 10
Match: AT3G22450.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 86.3 bits (212), Expect = 3.0e-17
Identity = 44/120 (36.67%), Postives = 74/120 (61.67%), Query Frame = 0


Query: 67  TRRSREEAANRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAK 126
           T    E    R    ++ Q T  +  PF L+++ SK+ + A V+HR TSKV++VA + +K
Sbjct: 171 TDHPNEAVKKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISK 230

Query: 127 DLRNILPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENGI 186
           D++  L S  +  AC  +G ++A+RS E D++ + Y PRK ++IEGKL +V+  + +NG+
Sbjct: 231 DMKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGV 290

[Close]

BLAST of Chy3G049910 vs. TAIR 10
Match: AT5G27820.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 34/97 (35.05%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 90  YMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNILPSLTDHNACRVIGKLIA 149
           Y++P++L + F+ KF+HA+V+H  T+ V   A++  K LR  +    D  A   IGK++ 
Sbjct: 15  YLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILG 74

Query: 150 ERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENGI 187
           ER    D+ A++ + +K++R  GK+  VID+++E G+
Sbjct: 75  ERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGV 111

The following BLAST results are available for this feature:

BLAST of Chy3G049910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5P316	1.2e-07	34.41	50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rp...	[more]
A9BG02	1.0e-06	28.81	50S ribosomal protein L18 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) OX=4038...	[more]
A5FZU9	5.1e-06	29.91	50S ribosomal protein L18 OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=rpl...	[more]
B7L0T4	1.1e-05	31.18	50S ribosomal protein L18 OS=Methylorubrum extorquens (strain CM4 / NCIMB 13688)...	[more]
A9W4S4	1.1e-05	31.18	50S ribosomal protein L18 OS=Methylorubrum extorquens (strain PA1) OX=419610 GN=...	[more]

BLAST of Chy3G049910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B2Q8	4.7e-95	96.84	50S ribosomal protein L18-like OS=Cucumis melo OX=3656 GN=LOC103485371 PE=4 SV=1	[more]
A0A6J1JHY7	9.2e-83	87.18	uncharacterized protein LOC111487153 OS=Cucurbita maxima OX=3661 GN=LOC111487153...	[more]
A0A6J1JY30	2.0e-82	86.22	uncharacterized protein LOC111489327 OS=Cucurbita maxima OX=3661 GN=LOC111489327...	[more]
A0A6J1HH86	2.0e-82	85.20	uncharacterized protein LOC111464045 OS=Cucurbita moschata OX=3662 GN=LOC1114640...	[more]
A0A6J1DE20	2.3e-81	84.69	uncharacterized protein LOC111020202 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Chy3G049910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441144.1	3.06e-123	96.84	PREDICTED: 50S ribosomal protein L18-like [Cucumis melo]	[more]
XP_038886307.1	1.10e-108	89.95	50S ribosomal protein L18-like [Benincasa hispida]	[more]
XP_023521951.1	6.58e-108	86.73	uncharacterized protein LOC111785799 [Cucurbita pepo subsp. pepo]	[more]
XP_022990182.1	5.22e-107	87.18	uncharacterized protein LOC111487153 [Cucurbita maxima]	[more]
XP_022993255.1	1.55e-106	86.22	uncharacterized protein LOC111489327 [Cucurbita maxima]	[more]

BLAST of Chy3G049910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20230.1	2.3e-62	75.78	Ribosomal L18p/L5e family protein	[more]
AT1G08845.1	1.9e-24	43.80	Ribosomal L18p/L5e family protein	[more]
AT1G08845.2	1.9e-24	43.80	Ribosomal L18p/L5e family protein	[more]
AT3G22450.1	3.0e-17	36.67	Ribosomal L18p/L5e family protein	[more]
AT5G27820.1	1.2e-13	35.05	Ribosomal L18p/L5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 77..188 e-value: 6.5E-10 score: 39.4
IPR005484	Ribosomal protein L18	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 16..188
None	No IPR available	GENE3D	3.30.420.100		coord: 68..188 e-value: 3.2E-15 score: 58.6
None	No IPR available	PANTHER	PTHR12899:SF16	OS02G0689700 PROTEIN	coord: 16..188
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 83..186 e-value: 3.72339E-18 score: 73.7283
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 91..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G049910.1	Chy3G049910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome