Chy2G048010 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G048010
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Dynein light chain, type 1/2
Location	chrH02: 28654376 .. 28655187 (+)
RNA-Seq Expression	Chy2G048010
Synteny	Chy2G048010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTCATAATACAACTTCCTCATCCAAATCCATGGACCCCCACCTCAGAAACCAACCCCCCGACGCTGCCGTCGTCGTCGTCACTCCTTCCGTTGTCTCTCCCCACCCAACATCACCAAAACTAGATTCCCCAACCCCTTTGTCCGACTCAGACAACTTGTCAAAATCACACCCACCTTCCCCTGTCGGCCCCAGAACAGAGCAAAAGGTAGCCAAAAATCCCAACGAAACCCCTCAAGAACGCTCCACTACAGAGAAATTCAATGGTTCTGAAGAGAGATTTGAACATATGATCAACTGTATCACTGCCAAAGAAAGGGAAATGAAACAACTTTTAAAGGAACATGAACATCTCACTCGTAGACTTTCTGTTTCTCTTTCTTCATCACGTAGTGGAAGAAGATCATTCTATGGCTCGCAGATTCAGTTAGGAGATGTGTTTGCTAAAAATGGAGTCAAAGTGGTTTCGGCCAATATGCCACCGTTTATGCAGATCCATGCCGTCGATTGCGCTAGAAAAGCACATGACAGTATGGAGAAGTTCACTTCCAAATCCCTTGCCCTGACTCTCAAGAAGGTACATACAAATCAATTAGTTCATTTTAGTTTTTCTTGGTCAAAATGTTCAATTGGGTTGGCTGATTTTGGCAGGAATTTGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTAACACATTCAGTGGGTGGATTTCTGTATTTTTCAATGGCTCAGAAGCTTTACATTCTTCTCTTCAAAACTACTGTACAAAGAGCCAATTAG

mRNA sequence

ATGGCTACTCATAATACAACTTCCTCATCCAAATCCATGGACCCCCACCTCAGAAACCAACCCCCCGACGCTGCCGTCGTCGTCGTCACTCCTTCCGTTGTCTCTCCCCACCCAACATCACCAAAACTAGATTCCCCAACCCCTTTGTCCGACTCAGACAACTTGTCAAAATCACACCCACCTTCCCCTGTCGGCCCCAGAACAGAGCAAAAGGTAGCCAAAAATCCCAACGAAACCCCTCAAGAACGCTCCACTACAGAGAAATTCAATGGTTCTGAAGAGAGATTTGAACATATGATCAACTGTATCACTGCCAAAGAAAGGGAAATGAAACAACTTTTAAAGGAACATGAACATCTCACTCGTAGACTTTCTGTTTCTCTTTCTTCATCACGTAGTGGAAGAAGATCATTCTATGGCTCGCAGATTCAGTTAGGAGATGTGTTTGCTAAAAATGGAGTCAAAGTGGTTTCGGCCAATATGCCACCGTTTATGCAGATCCATGCCGTCGATTGCGCTAGAAAAGCACATGACAGTATGGAGAAGTTCACTTCCAAATCCCTTGCCCTGACTCTCAAGAAGGAATTTGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTAACACATTCAGTGGGTGGATTTCTGTATTTTTCAATGGCTCAGAAGCTTTACATTCTTCTCTTCAAAACTACTGTACAAAGAGCCAATTAG

Coding sequence (CDS)

ATGGCTACTCATAATACAACTTCCTCATCCAAATCCATGGACCCCCACCTCAGAAACCAACCCCCCGACGCTGCCGTCGTCGTCGTCACTCCTTCCGTTGTCTCTCCCCACCCAACATCACCAAAACTAGATTCCCCAACCCCTTTGTCCGACTCAGACAACTTGTCAAAATCACACCCACCTTCCCCTGTCGGCCCCAGAACAGAGCAAAAGGTAGCCAAAAATCCCAACGAAACCCCTCAAGAACGCTCCACTACAGAGAAATTCAATGGTTCTGAAGAGAGATTTGAACATATGATCAACTGTATCACTGCCAAAGAAAGGGAAATGAAACAACTTTTAAAGGAACATGAACATCTCACTCGTAGACTTTCTGTTTCTCTTTCTTCATCACGTAGTGGAAGAAGATCATTCTATGGCTCGCAGATTCAGTTAGGAGATGTGTTTGCTAAAAATGGAGTCAAAGTGGTTTCGGCCAATATGCCACCGTTTATGCAGATCCATGCCGTCGATTGCGCTAGAAAAGCACATGACAGTATGGAGAAGTTCACTTCCAAATCCCTTGCCCTGACTCTCAAGAAGGAATTTGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTAACACATTCAGTGGGTGGATTTCTGTATTTTTCAATGGCTCAGAAGCTTTACATTCTTCTCTTCAAAACTACTGTACAAAGAGCCAATTAG

Protein sequence

MATHNTTSSSKSMDPHLRNQPPDAAVVVVTPSVVSPHPTSPKLDSPTPLSDSDNLSKSHPPSPVGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHLTRRLSVSLSSSRSGRRSFYGSQIQLGDVFAKNGVKVVSANMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKTTVQRAN*

Homology

[Close]

BLAST of Chy2G048010 vs. ExPASy Swiss-Prot
Match: Q86A88 (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.0e-16
Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 154 VKVVSANMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFG 213
           + V +A+MP FMQ  A +C  KA +  E    + +A+ +KKEFD  Y P WHCIVGKSFG
Sbjct: 8   INVKNADMPDFMQQDATECTIKAFE--ETNIERDIAMIIKKEFDKKYSPTWHCIVGKSFG 67

Query: 214 SFVTHSVGGFLYFSMAQKLYILLFK 239
           SFVTH    F+YF++  K  +LLFK
Sbjct: 68  SFVTHETKNFIYFNI-NKHSVLLFK 89

[Close]

BLAST of Chy2G048010 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-15
Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 156 VVSANMPPFMQIHAVDCARKAHDSMEKFT-SKSLALTLKKEFDGVYGPAWHCIVGKSFGS 215
           + +A+MP  MQ  AVDCA +A   +EKF   K +A  +KKEFD  Y P WHCIVG++FGS
Sbjct: 8   IKNADMPEDMQQDAVDCATQA---LEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 216 FVTHSVGGFLYFSMAQKLYILLFKT 240
           +VTH    F+YF + Q + +LLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAVLLFKS 88

[Close]

BLAST of Chy2G048010 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.9e-14
Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 156 VVSANMPPFMQIHAVDCARKAHDSMEKFT-SKSLALTLKKEFDGVYGPAWHCIVGKSFGS 215
           + +A+M   MQ  AVDCA +A   MEK+   K +A  +KKEFD  Y P WHCIVG++FGS
Sbjct: 8   IKNADMSEDMQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 216 FVTHSVGGFLYFSMAQKLYILLFKT 240
           +VTH    F+YF + Q + ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of Chy2G048010 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.9e-14
Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 156 VVSANMPPFMQIHAVDCARKAHDSMEKFT-SKSLALTLKKEFDGVYGPAWHCIVGKSFGS 215
           + +A+M   MQ  AVDCA +A   MEK+   K +A  +KKEFD  Y P WHCIVG++FGS
Sbjct: 8   IKNADMSEDMQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 216 FVTHSVGGFLYFSMAQKLYILLFKT 240
           +VTH    F+YF + Q + ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of Chy2G048010 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.9e-14
Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 156 VVSANMPPFMQIHAVDCARKAHDSMEKFT-SKSLALTLKKEFDGVYGPAWHCIVGKSFGS 215
           + +A+M   MQ  AVDCA +A   MEK+   K +A  +KKEFD  Y P WHCIVG++FGS
Sbjct: 8   IKNADMSEDMQQDAVDCATQA---MEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 216 FVTHSVGGFLYFSMAQKLYILLFKT 240
           +VTH    F+YF + Q + ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of Chy2G048010 vs. ExPASy TrEMBL
Match: A0A0A0LPA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G008410 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 9.2e-128
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVVVVTPSVVSPHPTSPKLDSPTPLSDSDNLSKSHP 60
           MATHNTTSSSKSMDPHLRNQPPDAAV VVTP+VVSPHPTSPKLDSPTPLSDSDNLSKS P
Sbjct: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDSPTPLSDSDNLSKSRP 60

Query: 61  PSPVGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL 120
           PSPVGPRTEQKVAKNPNETPQE STTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL
Sbjct: 61  PSPVGPRTEQKVAKNPNETPQEHSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL 120

Query: 121 TRRLSVSLSSSRSG-RRSFYGSQIQLGDVFAKNGVKVVSANMPPFMQIHAVDCARKAHDS 180
           TRRLSVSLSSSRSG RRSFYGSQIQLGDVFAKNGVKVVSA+MPPFMQIHAVDCARKAHDS
Sbjct: 121 TRRLSVSLSSSRSGRRRSFYGSQIQLGDVFAKNGVKVVSADMPPFMQIHAVDCARKAHDS 180

Query: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240
           MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT
Sbjct: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240

Query: 241 TVQRAN 246
           TVQRAN
Sbjct: 241 TVQRAN 246

[Close]

BLAST of Chy2G048010 vs. ExPASy TrEMBL
Match: A0A5A7UPX5 (Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002210 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.6e-125
Identity = 234/246 (95.12%), Postives = 239/246 (97.15%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVVVVTPSVVSPHPTSPKLDSPTPLSDSDNLSKSHP 60
           MATHNTTSSSKSMDPHLRNQPPDAAV VVTP+VVSPHPTSPKLD PTPLSDSDNLSKSHP
Sbjct: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60

Query: 61  PSPVGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL 120
           PSPVGPRTEQKVAK  NETPQE +TTEKFNGSEERFEHMINCITAKEREMKQLLKEHEH+
Sbjct: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120

Query: 121 TRRLSVSLSSSRSG-RRSFYGSQIQLGDVFAKNGVKVVSANMPPFMQIHAVDCARKAHDS 180
           TRRLS+SLSSSRSG RRSFYGSQIQLGDVFAKNG KVVSA+MPPFMQIHAVDCARKAHDS
Sbjct: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180

Query: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240
           MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT
Sbjct: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240

Query: 241 TVQRAN 246
           TVQRAN
Sbjct: 241 TVQRAN 246

[Close]

BLAST of Chy2G048010 vs. ExPASy TrEMBL
Match: A0A1S3BVI8 (uncharacterized protein LOC103493957 OS=Cucumis melo OX=3656 GN=LOC103493957 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.6e-125
Identity = 234/246 (95.12%), Postives = 239/246 (97.15%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVVVVTPSVVSPHPTSPKLDSPTPLSDSDNLSKSHP 60
           MATHNTTSSSKSMDPHLRNQPPDAAV VVTP+VVSPHPTSPKLD PTPLSDSDNLSKSHP
Sbjct: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60

Query: 61  PSPVGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL 120
           PSPVGPRTEQKVAK  NETPQE +TTEKFNGSEERFEHMINCITAKEREMKQLLKEHEH+
Sbjct: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120

Query: 121 TRRLSVSLSSSRSG-RRSFYGSQIQLGDVFAKNGVKVVSANMPPFMQIHAVDCARKAHDS 180
           TRRLS+SLSSSRSG RRSFYGSQIQLGDVFAKNG KVVSA+MPPFMQIHAVDCARKAHDS
Sbjct: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180

Query: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240
           MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT
Sbjct: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240

Query: 241 TVQRAN 246
           TVQRAN
Sbjct: 241 TVQRAN 246

[Close]

BLAST of Chy2G048010 vs. ExPASy TrEMBL
Match: A0A6J1E0M2 (uncharacterized protein LOC111429742 OS=Cucurbita moschata OX=3662 GN=LOC111429742 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.6e-102
Identity = 209/250 (83.60%), Postives = 218/250 (87.20%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVV-VVTPSVVSPHPTSPKLDSPTPLSDSDNLSKSH 60
           MA+H T+S   S+DP+ RN P  AA   VVT + VSP+PTS KLD  TPLSDSD LSKSH
Sbjct: 1   MASHETSS---SIDPNRRNHPAAAAAASVVTLAAVSPNPTSSKLDPITPLSDSDKLSKSH 60

Query: 61  PPSP--VGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINCITAKEREMKQLLKEH 120
           PPSP  VGPRT Q VAK PNE P ERSTTEKFN SEE+FE MINCITAKEREMKQLLKEH
Sbjct: 61  PPSPKMVGPRTVQMVAKKPNEAPLERSTTEKFNDSEEKFERMINCITAKEREMKQLLKEH 120

Query: 121 EHLTRRLSVSLSSSRSG--RRSFYGSQIQLGDVFAKNGVKVVSANMPPFMQIHAVDCARK 180
           EHLTRRLSVSLSSSRSG  RRS  GSQI+L DVFA NGVKVVSA+MPPFMQIHAVDCARK
Sbjct: 121 EHLTRRLSVSLSSSRSGRRRRSICGSQIELADVFANNGVKVVSADMPPFMQIHAVDCARK 180

Query: 181 AHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYIL 240
           AHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYIL
Sbjct: 181 AHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYIL 240

Query: 241 LFKTTVQRAN 246
           LFKTTVQRAN
Sbjct: 241 LFKTTVQRAN 247

[Close]

BLAST of Chy2G048010 vs. ExPASy TrEMBL
Match: A0A6J1IBG1 (uncharacterized protein LOC111471403 OS=Cucurbita maxima OX=3661 GN=LOC111471403 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.0e-94
Identity = 196/264 (74.24%), Postives = 210/264 (79.55%), Query Frame = 0


Query: 1   MATHNTT-----SSSKSMDPHLRNQPPDAAVVVVTPSVVSPHPTSPKLDSPTPLSDSDNL 60
           MA+H T+     S    MD H R QP   A      + VSPHPTSPKLD  TPLSDSDNL
Sbjct: 15  MASHQTSHQRLLSPPPKMDLHRRTQPTTPAAA----TTVSPHPTSPKLDPITPLSDSDNL 74

Query: 61  SKSHPPSP-------------VGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINC 120
           SKSHPPSP             VGPRT  K AK PNETP++ STTEKFN SEE+FE MINC
Sbjct: 75  SKSHPPSPKVVPVSLHSNPKMVGPRTVHKQAKKPNETPRQHSTTEKFNDSEEKFERMINC 134

Query: 121 ITAKEREMKQLLKEHEHLTRRLSVSLSSSRSGRR-SFYGSQIQLGDVFAKNGVKVVSANM 180
           IT KEREMKQLL +H+HLTRRLSVSLSSSRSGRR S  GSQIQL ++FA NGVKVVSA+M
Sbjct: 135 ITTKEREMKQLLVDHQHLTRRLSVSLSSSRSGRRKSICGSQIQLAELFANNGVKVVSADM 194

Query: 181 PPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVG 240
           PPFMQIHAVDCARKAHDSMEKFTSKSLAL+LK+EFDG YGPAWHCIVGKSFGSFVTHSVG
Sbjct: 195 PPFMQIHAVDCARKAHDSMEKFTSKSLALSLKQEFDGAYGPAWHCIVGKSFGSFVTHSVG 254

Query: 241 GFLYFSMAQKLYILLFKTTVQRAN 246
           GFLYFS+AQKLYILLFKTTV RAN
Sbjct: 255 GFLYFSLAQKLYILLFKTTVLRAN 274

[Close]

BLAST of Chy2G048010 vs. NCBI nr
Match: XP_004138141.2 (uncharacterized protein LOC101215824 [Cucumis sativus] >KGN63633.1 hypothetical protein Csa_013893 [Cucumis sativus])

HSP 1 Score: 468 bits (1203), Expect = 9.20e-166
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVVVVTPSVVSPHPTSPKLDSPTPLSDSDNLSKSHP 60
           MATHNTTSSSKSMDPHLRNQPPDAAV VVTP+VVSPHPTSPKLDSPTPLSDSDNLSKS P
Sbjct: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDSPTPLSDSDNLSKSRP 60

Query: 61  PSPVGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL 120
           PSPVGPRTEQKVAKNPNETPQE STTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL
Sbjct: 61  PSPVGPRTEQKVAKNPNETPQEHSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL 120

Query: 121 TRRLSVSLSSSRSGRR-SFYGSQIQLGDVFAKNGVKVVSANMPPFMQIHAVDCARKAHDS 180
           TRRLSVSLSSSRSGRR SFYGSQIQLGDVFAKNGVKVVSA+MPPFMQIHAVDCARKAHDS
Sbjct: 121 TRRLSVSLSSSRSGRRRSFYGSQIQLGDVFAKNGVKVVSADMPPFMQIHAVDCARKAHDS 180

Query: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240
           MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT
Sbjct: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240

Query: 241 TVQRAN 245
           TVQRAN
Sbjct: 241 TVQRAN 246

[Close]

BLAST of Chy2G048010 vs. NCBI nr
Match: XP_008453160.1 (PREDICTED: uncharacterized protein LOC103493957 [Cucumis melo] >KAA0057912.1 Dynein light chain, type 1/2 [Cucumis melo var. makuwa] >TYJ98600.1 Dynein light chain, type 1/2 [Cucumis melo var. makuwa])

HSP 1 Score: 458 bits (1179), Expect = 4.19e-162
Identity = 234/246 (95.12%), Postives = 239/246 (97.15%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVVVVTPSVVSPHPTSPKLDSPTPLSDSDNLSKSHP 60
           MATHNTTSSSKSMDPHLRNQPPDAAV VVTP+VVSPHPTSPKLD PTPLSDSDNLSKSHP
Sbjct: 1   MATHNTTSSSKSMDPHLRNQPPDAAVAVVTPAVVSPHPTSPKLDPPTPLSDSDNLSKSHP 60

Query: 61  PSPVGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHL 120
           PSPVGPRTEQKVAK  NETPQE +TTEKFNGSEERFEHMINCITAKEREMKQLLKEHEH+
Sbjct: 61  PSPVGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMINCITAKEREMKQLLKEHEHV 120

Query: 121 TRRLSVSLSSSRSGRR-SFYGSQIQLGDVFAKNGVKVVSANMPPFMQIHAVDCARKAHDS 180
           TRRLS+SLSSSRSGRR SFYGSQIQLGDVFAKNG KVVSA+MPPFMQIHAVDCARKAHDS
Sbjct: 121 TRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSADMPPFMQIHAVDCARKAHDS 180

Query: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240
           MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT
Sbjct: 181 MEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILLFKT 240

Query: 241 TVQRAN 245
           TVQRAN
Sbjct: 241 TVQRAN 246

[Close]

BLAST of Chy2G048010 vs. NCBI nr
Match: XP_038879954.1 (uncharacterized protein LOC120071657 [Benincasa hispida])

HSP 1 Score: 410 bits (1053), Expect = 1.02e-142
Identity = 221/259 (85.33%), Postives = 227/259 (87.64%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVVVVTPSVVSPHPTSPKLDSPTPLSDSDNLSKSHP 60
           MA+HNT+SSSKSMDPH RNQPP AA  VVTP+VVSPHPTSPKLD  TPLSDSDNLSKS+P
Sbjct: 1   MASHNTSSSSKSMDPHRRNQPP-AAAAVVTPAVVSPHPTSPKLDPTTPLSDSDNLSKSNP 60

Query: 61  PSP-------------VGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINCITAKE 120
           PSP             VGP T QKVAK PNETPQE STTEKFN SEER+E MINCITAKE
Sbjct: 61  PSPKVDSISLHSHPKMVGPITVQKVAKKPNETPQEHSTTEKFNDSEERYERMINCITAKE 120

Query: 121 REMKQLLKEHEHLTRRLSVSLSSSRSGRR-SFYGSQIQLGDVFAKNGVKVVSANMPPFMQ 180
           REMKQLLKEHEHLTRRLSVSLSSSRSGRR S   SQIQL DVFA NGVKVVSA+MPPFMQ
Sbjct: 121 REMKQLLKEHEHLTRRLSVSLSSSRSGRRKSICVSQIQLADVFANNGVKVVSADMPPFMQ 180

Query: 181 IHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYF 240
           IHAVDCARK HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYF
Sbjct: 181 IHAVDCARKTHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYF 240

Query: 241 SMAQKLYILLFKTTVQRAN 245
           SMAQKLYILLFKTTVQRAN
Sbjct: 241 SMAQKLYILLFKTTVQRAN 258

[Close]

BLAST of Chy2G048010 vs. NCBI nr
Match: KAG6589483.1 (Dynein light chain, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 385 bits (989), Expect = 3.35e-133
Identity = 210/249 (84.34%), Postives = 218/249 (87.55%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVVVVTPSVVSPHPTSPKLDSPTPLSDSDNLSKSHP 60
           MA+H T+SS   +DP+ RN P   A  VVT + VSP+PTSPKLD  TPLSDSD LSKSHP
Sbjct: 1   MASHETSSS---IDPNRRNHP---AASVVTLAAVSPNPTSPKLDPITPLSDSDKLSKSHP 60

Query: 61  PSP--VGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHE 120
           PSP  VGPRT Q VAK PNE PQE STTEKFN SEERFE MINCITAKEREMKQLLKEHE
Sbjct: 61  PSPKMVGPRTVQMVAKKPNEAPQEHSTTEKFNNSEERFERMINCITAKEREMKQLLKEHE 120

Query: 121 HLTRRLSVSLSSSRSGRR--SFYGSQIQLGDVFAKNGVKVVSANMPPFMQIHAVDCARKA 180
           HLTRRLSVSLSSSRSGRR  S  GSQI+L DVFA NGVKVVSA+MPPFMQIHAVDCARKA
Sbjct: 121 HLTRRLSVSLSSSRSGRRRRSICGSQIELADVFANNGVKVVSADMPPFMQIHAVDCARKA 180

Query: 181 HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL 240
           HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL
Sbjct: 181 HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL 240

Query: 241 FKTTVQRAN 245
           FKTTVQRAN
Sbjct: 241 FKTTVQRAN 243

[Close]

BLAST of Chy2G048010 vs. NCBI nr
Match: XP_023516401.1 (uncharacterized protein LOC111780277 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385 bits (989), Expect = 3.60e-133
Identity = 210/249 (84.34%), Postives = 219/249 (87.95%), Query Frame = 0


Query: 1   MATHNTTSSSKSMDPHLRNQPPDAAVVVVTPSVVSPHPTSPKLDSPTPLSDSDNLSKSHP 60
           MA+H T+SS   +DP+ RN P  AA  VVT + VSP+PTSPKLD  TPLSDSD LSKSHP
Sbjct: 1   MASHETSSS---IDPNRRNHPA-AAASVVTLAAVSPNPTSPKLDPITPLSDSDKLSKSHP 60

Query: 61  PSP--VGPRTEQKVAKNPNETPQERSTTEKFNGSEERFEHMINCITAKEREMKQLLKEHE 120
           PSP  VGPRT Q VAK PNE PQE STTEKFN SEE+FE MINCITAKEREMKQLLKEHE
Sbjct: 61  PSPKMVGPRTVQMVAKKPNEAPQEHSTTEKFNDSEEKFERMINCITAKEREMKQLLKEHE 120

Query: 121 HLTRRLSVSLSSSRSGRR--SFYGSQIQLGDVFAKNGVKVVSANMPPFMQIHAVDCARKA 180
           HLTRRLSVSLSSSRSGRR  S  GSQI+L DVFA NGVKVVSA+MPPFMQIHAVDCARKA
Sbjct: 121 HLTRRLSVSLSSSRSGRRRRSICGSQIELADVFANNGVKVVSADMPPFMQIHAVDCARKA 180

Query: 181 HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL 240
           HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL
Sbjct: 181 HDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMAQKLYILL 240

Query: 241 FKTTVQRAN 245
           FKTTVQRAN
Sbjct: 241 FKTTVQRAN 245

[Close]

BLAST of Chy2G048010 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-29
Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 154 VKVVSANMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFG 213
           V++++A+MP FMQ HA  CAR   DS+EKF+SK +A  LKKEFD  YGPAWHCIVG SFG
Sbjct: 117 VRILAADMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFG 176

Query: 214 SFVTHSVGGFLYFSMAQKLYILLFKTTVQRAN 246
           SFVTHS G F+YFSM  KLY+LLFKT V+ A+
Sbjct: 177 SFVTHSTGCFIYFSM-DKLYVLLFKTKVRPAS 207

[Close]

BLAST of Chy2G048010 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.1e-19
Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 154 VKVVSANMPPFMQIHAVDCARKAHDSME-KFTSKSLALTLKKEFDGVYGPAWHCIVGKSF 213
           V+V +++MP   Q  A   +R+  ++   K  +K LA  LKK+FD  YGPAWHCIVG SF
Sbjct: 36  VRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSF 95

Query: 214 GSFVTHSVGGFLYFSMAQKLYILLFKTTVQ 243
           GS+VTHS GGFLYF +  K+Y+LLFKT V+
Sbjct: 96  GSYVTHSTGGFLYFQI-DKVYVLLFKTAVE 124

[Close]

BLAST of Chy2G048010 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13
Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 156 VVSANMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGSF 215
           V  ++MP  MQ+ A+  A +A D  + F  KS+A  +KKEFD  YG  W C+VG +FG F
Sbjct: 8   VEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVGSNFGCF 67

Query: 216 VTHSVGGFLYFSMAQKLYILLFK 239
            THS G F+YF + + L  L+FK
Sbjct: 68  FTHSKGTFIYFQL-ETLKFLIFK 89

[Close]

BLAST of Chy2G048010 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 73.6 bits (179), Expect = 2.6e-13
Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 155 KVVSANMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFGS 214
           KV   +MP  MQ+ A+  A ++ D  + F S S+A  +KKEFD  YG  W C+VG +FG 
Sbjct: 7   KVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNFGC 66

Query: 215 FVTHSVGGFLYFSMAQKLYILLFK 239
           F THS G F+YF +   L  L+FK
Sbjct: 67  FFTHSKGTFIYFHLG-TLNFLIFK 89

[Close]

BLAST of Chy2G048010 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 72.0 bits (175), Expect = 7.5e-13
Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 156 VVSANMPPFMQIHAVDCARKAHDSMEKFT-SKSLALTLKKEFDGVYGPAWHCIVGKSFGS 215
           + SA+M   MQ  A++ A  A    EK++  K +A  +KKEFD  +G  WHCIVG++FGS
Sbjct: 42  IKSADMKDDMQKEAIEIAISA---FEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGS 101

Query: 216 FVTHSVGGFLYFSMAQKLYILLFKT 240
           +VTH    F+YF + QK  +LLFK+
Sbjct: 102 YVTHETNHFVYFYLDQKA-VLLFKS 122

The following BLAST results are available for this feature:

BLAST of Chy2G048010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q86A88	7.0e-16	50.59	Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=...	[more]
O02414	5.9e-15	50.59	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q3MHR3	3.9e-14	50.59	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]
Q96FJ2	3.9e-14	50.59	Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1	[more]
Q9D0M5	3.9e-14	50.59	Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1	[more]

BLAST of Chy2G048010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPA2	9.2e-128	97.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G008410 PE=4 SV=1	[more]
A0A5A7UPX5	5.6e-125	95.12	Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BVI8	5.6e-125	95.12	uncharacterized protein LOC103493957 OS=Cucumis melo OX=3656 GN=LOC103493957 PE=...	[more]
A0A6J1E0M2	6.6e-102	83.60	uncharacterized protein LOC111429742 OS=Cucurbita moschata OX=3662 GN=LOC1114297...	[more]
A0A6J1IBG1	1.0e-94	74.24	uncharacterized protein LOC111471403 OS=Cucurbita maxima OX=3661 GN=LOC111471403...	[more]

BLAST of Chy2G048010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138141.2	9.20e-166	97.56	uncharacterized protein LOC101215824 [Cucumis sativus] >KGN63633.1 hypothetical ...	[more]
XP_008453160.1	4.19e-162	95.12	PREDICTED: uncharacterized protein LOC103493957 [Cucumis melo] >KAA0057912.1 Dyn...	[more]
XP_038879954.1	1.02e-142	85.33	uncharacterized protein LOC120071657 [Benincasa hispida]	[more]
KAG6589483.1	3.35e-133	84.34	Dynein light chain, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516401.1	3.60e-133	84.34	uncharacterized protein LOC111780277 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy2G048010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20110.1	2.0e-29	66.30	Dynein light chain type 1 family protein	[more]
AT1G23220.1	4.1e-19	53.33	Dynein light chain type 1 family protein	[more]
AT1G52240.2	2.0e-13	45.78	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	2.6e-13	45.24	Dynein light chain type 1 family protein	[more]
AT4G15930.1	7.5e-13	45.88	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..63
None	No IPR available	PANTHER	PTHR11886:SF80	INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE	coord: 13..245
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 149..239 e-value: 2.5E-36 score: 136.7
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 154..239 e-value: 9.9E-28 score: 96.4
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 13..245
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 148..240 e-value: 6.0E-30 score: 105.1
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 152..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G048010.1	Chy2G048010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding