Chy2G047590 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G047590
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	HNH domain-containing protein
Location	chrH02: 28423387 .. 28426036 (+)
RNA-Seq Expression	Chy2G047590
Synteny	Chy2G047590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCGAAGCAAAGCATCGAAGAAGAAAACTCGCCCCTCATCACCGCTCAGGGACCGAACTGGTTCTCCAACAAGTCTCGAATCGAGGCGTTATGGCTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTCGACCAGGACCTCGTCACCGGCGAATCCAGTCTCCTTCGAGACCTAAAATTCTCTCCCGACGACTCAGTTTCCAACTACAATCCCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGTAGTTCCCCTTTCCGAATTCTGATTTTTTTTGTTATTACTCTGTTTTAGGACTGTTGTGAGGTGGTTTTGTTTAGTTCTTGTAATTTAGGCTGTGGGATGGAAATGAGTAAGAACTCTTGATAATGTGCTCATTAGAGACATGGTAATGTATTGCTTCCAATTCTAGTTGGGCCATGCTGAAATTAGCTTGGTGGGTTCTTCTTCTTTGTACATAAATGGGTTAGACTTGTCATTTTTAATGTATTGTGACTTGAAAATCTTCGATTTCTGTTTCTATTTAGACTATCACATGTTTTTAATAAGTTGTTTTCAATTATAGTATTGGATATTTGACGTTTTTATATGGTTGTGGAATTTTTTTATAATCTTCTCTTCTATCTCTCCCAGAAGATTTGTGTACAATTTTGTTTTTTTATTGCTTCCTAAGTTTTTGTGGACTTTACCAACCGAAGAGATAGCATTGGAAGATGACTGATTAATTGGTTAATTTTATGCGAATGGAAGCTTAGTACGAGCAACTAAATGTGTTAAGAAATGAATGAAACGATGAAATGAAAATTAAATTACTTTGGATAGAGTTAATTATCAGTAAGCATGAACTTCTTTTCGACTTCAAAATTTTAAGGGAGGTTTGGGATCTTATCCTAATTGAGTGTGAATATTCTATTAGTCATACCTTTATCATTTTTTCTATTTGCTGAAAAGTTGAGTATGAGATTCTGAGAGTCTACTTGTTATGAAGTATCTTTGCCATATTTATTTCTTAATAAATTCAGTAGGTGTTTTTGAGTTACTCTTCAGGCTGAGTGTATGAATACTTCATATTGCAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGTAATAATCCTAATGACTTTCCTTTTGTCCCATCCAAACTTCATTTAGTGTTGTTTTCAACCTTGCGTTTAGTTTGCGCTGTTTTCCGGAAGATAGGCAGCATTATTCCTTGAAATCAATAGGACCAAGAGGATATTATATTATAGAGGACAGAGCTACTGATTGTTCTGTTTGCTAAATAATGTGTCCCCCATGGCCAGATGTTACTACATAATAGTTCTTAATGCTTTGTTGACTGTGCTTCCGACTGTCTTTTCAATTATTTGATTGTCTCCTCTCTCAAACTTTTCCTTTGACGTACTGAAGGATGAACACTGTCCCCTCATGGCTGGTCATAGTTGATTGTTCTTCTTTAACAAGGGACCTGCCCTTAGATACTAGAGTTTACAAGAGTTAATTACTTGCTAGATTATAATTGAAATTCTTTATTCAGATTTTTCTATTCATCATGTGTAAGAGGACGTTACACAGTTTTACACTTGATATTATTTATTTTCAAAGGCTCTTTTACATTATTCATTATTGTAAAGTCAGGGGGTTGTTAATCCGGGAAGGACGTACAATCACGCAGCATTGTGGTTAATACATCTAGTCTTTGTTTAAATTTACTTCCCAAGTAATTTTGGAAGCCAAAGATTTGATTCAATCATATTTGAAGAATCATTTTAAATTTAATTATTTAAAAGGTGTTTCTTAAGTGATTCAATCACTTAGGAATCAATTTCATTGTGATTTGTAGAATCTCCTTTAGATATAGTGCAACAAGACAAACTTGATTAAAAATCACCTTTAGAAAATGTAACCACACTAGAATTTTAATTAAAATAAATTTTCTTAAGAGGTACCGATCGAATACAAAAATACCACAATAACTGCTATATATTTGGTGGTTTGCTATAATTTCTATATCTCATAACAGTTTGAATTATTTTGTTTGCCAATAATTTCAAATAATTTGTTTCCTTATTCAAACCATTCTTCATTGCAAGAAAGAATTCTTCCAAATTCCTACTCCCAAGTCCCCCCATCTCCTTCTTATTTTATTTCACTATGTTGTTTAGTAGTTAGCATATTGCGTTATGATTATTATCTTCTGATGGCTGTATTATTCACGATATAGGCAACTGTGAATCGATCAAAGGGAAACCGGACTGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCAGGGTTTCAGGTACATTAGCTTTTGATTAAACAACAATATCTAAGGGTATTCAATTACACCTTGGTAATGATATCATATGGTCAATATGTTTACGTAATTTACAGGTCGAGACATGGATCTTCTTGAACTATCTGCTTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA

mRNA sequence

ATGAGGCGAAGCAAAGCATCGAAGAAGAAAACTCGCCCCTCATCACCGCTCAGGGACCGAACTGGTTCTCCAACAAGTCTCGAATCGAGGCGTTATGGCTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTCGACCAGGACCTCGTCACCGGCGAATCCAGTCTCCTTCGAGACCTAAAATTCTCTCCCGACGACTCAGTTTCCAACTACAATCCCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACTGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCAGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTGCTTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA

Coding sequence (CDS)

ATGAGGCGAAGCAAAGCATCGAAGAAGAAAACTCGCCCCTCATCACCGCTCAGGGACCGAACTGGTTCTCCAACAAGTCTCGAATCGAGGCGTTATGGCTCTCACCCATCAAGCCTCAGCCCCTCTGCATCCCTTCTCGACCAGGACCTCGTCACCGGCGAATCCAGTCTCCTTCGAGACCTAAAATTCTCTCCCGACGACTCAGTTTCCAACTACAATCCCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACACTGTTTTTCGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACTGAAATTTCGAGGGCAGAACTAATACAGAAAAGCTCTTACTGCAGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTGCTTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA

Protein sequence

MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ*

Homology

[Close]

BLAST of Chy2G047590 vs. ExPASy TrEMBL
Match: A0A0A0LUI5 (HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.3e-107
Identity = 196/200 (98.00%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRD 60
           MRRSK SKKKTRPSSPLRDRTGSPTSLESR YGSHPSSLSPSASLLD+DLVTGESSLL D
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Chy2G047590 vs. ExPASy TrEMBL
Match: A0A5A7US43 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002510 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.2e-106
Identity = 193/200 (96.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRD 60
           MRRSK SKKKTRPSSPLRDRTG+PTSLES RYGSHPSSLSPSASLLD+DLVTGES+LL D
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Chy2G047590 vs. ExPASy TrEMBL
Match: A0A1S3BWU4 (uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.2e-106
Identity = 193/200 (96.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRD 60
           MRRSK SKKKTRPSSPLRDRTG+PTSLES RYGSHPSSLSPSASLLD+DLVTGES+LL D
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Chy2G047590 vs. ExPASy TrEMBL
Match: A0A6J1I688 (uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.3e-97
Identity = 179/200 (89.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRD 60
           MR SK SKKKTRPSSPLRDRT   T  ESRR+GS+ S LSPS SLLD+DLVT E++LL D
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Chy2G047590 vs. ExPASy TrEMBL
Match: A0A6J1EZE0 (uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC111440950 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 178/200 (89.00%), Postives = 185/200 (92.50%), Query Frame = 0


Query: 1   MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRD 60
           MR SK SKKKTRPSSPLRDRT      ESRR+GSH S LSPS SLLD+DLVT E++LL D
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSKRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 201
           ELSAYGNVHRGQD GGCRIQ
Sbjct: 181 ELSAYGNVHRGQDPGGCRIQ 200

[Close]

BLAST of Chy2G047590 vs. NCBI nr
Match: XP_004138170.1 (uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical protein Csa_013308 [Cucumis sativus])

HSP 1 Score: 397 bits (1019), Expect = 3.17e-139
Identity = 196/200 (98.00%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRD 60
           MRRSK SKKKTRPSSPLRDRTGSPTSLESR YGSHPSSLSPSASLLD+DLVTGESSLL D
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Chy2G047590 vs. NCBI nr
Match: XP_008453210.1 (PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH endonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 393 bits (1009), Expect = 1.06e-137
Identity = 193/200 (96.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRD 60
           MRRSK SKKKTRPSSPLRDRTG+PTSLES RYGSHPSSLSPSASLLD+DLVTGES+LL D
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTSLESTRYGSHPSSLSPSASLLDRDLVTGESNLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Chy2G047590 vs. NCBI nr
Match: XP_038880609.1 (uncharacterized protein LOC120072255 [Benincasa hispida])

HSP 1 Score: 378 bits (971), Expect = 6.61e-132
Identity = 186/200 (93.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRD 60
           MRR+K SKKKTR SSPLRDRTG PTSLESRRYGS+PSSLSPSASLLD+DL+TGE+SLL D
Sbjct: 1   MRRNKESKKKTRSSSPLRDRTGDPTSLESRRYGSNPSSLSPSASLLDRDLITGEASLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPDD VS+YNPRSFPHSVKQQCWDKAEKIKGRDP RWRRDALGN VFRKLVGCPGCL
Sbjct: 61  LKLSPDDLVSDYNPRSFPHSVKQQCWDKAEKIKGRDPSRWRRDALGNIVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Chy2G047590 vs. NCBI nr
Match: XP_023529236.1 (uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363 bits (932), Expect = 5.83e-126
Identity = 179/200 (89.50%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRD 60
           MR SK SKKKTRPSSPLRDRT   T  ESRR+GSH S LSPS SLLD+DLVT E++LL D
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSHSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPD SVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Chy2G047590 vs. NCBI nr
Match: XP_022972967.1 (uncharacterized protein LOC111471489 [Cucurbita maxima])

HSP 1 Score: 363 bits (932), Expect = 5.83e-126
Identity = 179/200 (89.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MRRSKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRD 60
           MR SK SKKKTRPSSPLRDRT   T  ESRR+GS+ S LSPS SLLD+DLVT E++LL D
Sbjct: 1   MRSSKESKKKTRPSSPLRDRTSPSTRFESRRHGSNSSRLSPSTSLLDRDLVTSEANLLGD 60

Query: 61  LKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120
           LK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL
Sbjct: 61  LKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCL 120

Query: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLL 180
           CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLL
Sbjct: 121 CHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDMDLL 180

Query: 181 ELSAYGNVHRGQDSGGCRIQ 200
           ELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 ELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Chy2G047590 vs. TAIR 10
Match: AT3G47490.1 (HNH endonuclease )

HSP 1 Score: 238.8 bits (608), Expect = 3.8e-63
Identity = 126/197 (63.96%), Postives = 144/197 (73.10%), Query Frame = 0


Query: 4   SKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKF 63
           S +S  KTRP       +GSP        G     +  SA+LLD++    E  L     +
Sbjct: 53  SSSSPSKTRPEL----SSGSPNRNTGEARG---GKVKTSATLLDRE----EMGLFPGSGY 112

Query: 64  SPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHD 123
                  N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLCHD
Sbjct: 113 GD----PNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHD 172

Query: 124 YDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELS 183
           YDHI+PYSKGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+GRDMDL+EL+
Sbjct: 173 YDHIVPYSKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSSYCRVAGRDMDLIELT 232

Query: 184 AYGNVHRGQDSGGCRIQ 201
           AYGNV R   S GCRIQ
Sbjct: 233 AYGNVQRAPTSSGCRIQ 234

[Close]

BLAST of Chy2G047590 vs. TAIR 10
Match: AT3G47490.3 (HNH endonuclease )

HSP 1 Score: 226.9 bits (577), Expect = 1.5e-59
Identity = 126/217 (58.06%), Postives = 144/217 (66.36%), Query Frame = 0


Query: 4   SKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKF 63
           S +S  KTRP       +GSP        G     +  SA+LLD++    E  L     +
Sbjct: 14  SSSSPSKTRPEL----SSGSPNRNTGEARG---GKVKTSATLLDRE----EMGLFPGSGY 73

Query: 64  SPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHD 123
                  N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLCHD
Sbjct: 74  GD----PNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHD 133

Query: 124 YDHILPYS--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRAEL 183
           YDHI+PYS                    KGGKSTLENCQVLQA VNRSKGN+T+ISR+EL
Sbjct: 134 YDHIVPYSKDMCPLEHAFDEPHKDFLDLKGGKSTLENCQVLQAKVNRSKGNKTDISRSEL 193

Query: 184 IQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ 201
           IQ+SSYCRV+GRDMDL+EL+AYGNV R   S GCRIQ
Sbjct: 194 IQRSSYCRVAGRDMDLIELTAYGNVQRAPTSSGCRIQ 215

[Close]

BLAST of Chy2G047590 vs. TAIR 10
Match: AT3G47490.2 (HNH endonuclease )

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29
Identity = 71/129 (55.04%), Postives = 82/129 (63.57%), Query Frame = 0


Query: 4   SKASKKKTRPSSPLRDRTGSPTSLESRRYGSHPSSLSPSASLLDQDLVTGESSLLRDLKF 63
           S +S  KTRP       +GSP        G     +  SA+LLD++    E  L     +
Sbjct: 53  SSSSPSKTRPEL----SSGSPNRNTGEARG---GKVKTSATLLDRE----EMGLFPGSGY 112

Query: 64  SPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHD 123
                  N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGN VFRKLVGCPGCLCHD
Sbjct: 113 GD----PNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHD 166

Query: 124 YDHILPYSK 133
           YDHI+PYSK
Sbjct: 173 YDHIVPYSK 166

[Close]

BLAST of Chy2G047590 vs. TAIR 10
Match: AT1G18680.1 (HNH endonuclease domain-containing protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 57/143 (39.86%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 64  SPDDSVSNYN--------PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVG 123
           SP  S S  N        PR F    K +CW  A+ + GR P+RWR+D  GN V ++   
Sbjct: 22  SPPSSPSRSNVKSNGEERPRFFDGKAKNKCWANADIVPGRHPERWRKDVAGNIVCKRFGN 81

Query: 124 CPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGR 183
           C GCLC +YDHI+PYSKGG+S  ENCQ+LQ  VNR K  +  +    L   S   + + +
Sbjct: 82  CNGCLCFEYDHIVPYSKGGESIAENCQILQTRVNRFKSAQENVDATTLKSYSCGLQFTDK 141

Query: 184 DMDLLELSAYGNVHRGQDSGGCR 199
           ++D++E++ YG+V R      C+
Sbjct: 142 ELDVIEMAVYGDVLRPGKECRCK 164

The following BLAST results are available for this feature:

BLAST of Chy2G047590 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G047590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUI5	4.3e-107	98.00	HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV...	[more]
A0A5A7US43	6.2e-106	96.50	HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002...	[more]
A0A1S3BWU4	6.2e-106	96.50	uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=...	[more]
A0A6J1I688	5.3e-97	89.50	uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489...	[more]
A0A6J1EZE0	1.5e-96	89.00	uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]

BLAST of Chy2G047590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138170.1	3.17e-139	98.00	uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical ...	[more]
XP_008453210.1	1.06e-137	96.50	PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH...	[more]
XP_038880609.1	6.61e-132	93.00	uncharacterized protein LOC120072255 [Benincasa hispida]	[more]
XP_023529236.1	5.83e-126	89.50	uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]	[more]
XP_022972967.1	5.83e-126	89.50	uncharacterized protein LOC111471489 [Cucurbita maxima]	[more]

BLAST of Chy2G047590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47490.1	3.8e-63	63.96	HNH endonuclease	[more]
AT3G47490.3	1.5e-59	58.06	HNH endonuclease	[more]
AT3G47490.2	2.1e-29	55.04	HNH endonuclease	[more]
AT1G18680.1	1.1e-27	39.86	HNH endonuclease domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.30.50		coord: 79..172 e-value: 4.4E-8 score: 34.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR33427:SF3	HNH ENDONUCLEASE	coord: 8..200
None	No IPR available	PANTHER	PTHR33427	HNH ENDONUCLEASE	coord: 8..200
IPR002711	HNH endonuclease	PFAM	PF01844	HNH	coord: 122..155 e-value: 1.5E-4 score: 21.9
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 109..153 e-value: 1.27859E-5 score: 39.3772

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G047590.1	Chy2G047590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding