Chy2G047480 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G047480
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH02: 28361389 .. 28363528 (-)
RNA-Seq Expression	Chy2G047480
Synteny	Chy2G047480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCTGAGAAGAAGCGTTTCGTTGTTGAAGTTAAAATGGGATAGCTTCATTGCGCAATCCGTCTGTACGCAGCATCGGTTTTGTTCCCTTCATTCCACCGTAAACAATGGAGCTGCTGTATCAAAACTGTGTGAAGTGATTTCATGTACGATCGGTGGTTTAGATGAATTGGAATCCAGTTTGAACAAATGTACAATATCATTGACATCTTCATTAGTTACCCAAGTTATTGATTCTAGCAAAAATGAAGCTCCCACTAGAAGATTGCTTAGATTTTTTTTGTGGTCTCTCAAGAAGTTAAACCACACTTTAGAAGATGAAGATTTCAATAATGCCATCCGCTTTTTTGCTCAGAAGAAGGACTACACTGCCGTTTACATTTTACTTTCTAATCTTAAGAAAGCCGACCGGGCAATGGACGGCCAGACTTTCGGTTTTGTGGCTGAAGCTTTTGTCAAAATGGATCGAGAAGATGAAGCATTGGGTCTGTTCAAGAACCTGGAGAAGTACAAATGCCCACATGACCAATTTACTGTCGTAGCTATTATTACTGCTCTTTGTTCGAAAGGGCATGCTAAAAGAGCAGAAGGAGTTGTCTTGCACCACAAGGACAAGATTTCTAGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCTATTAAGAAGAACACAAAAGAAGCAAGAAGAATACTGACAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCTGCTACAACACTTTTCTCAAGTGTCTTTGTGAGAAAAATGTTGAGAAAAATCCTTCAGGTCTTGTGCCTGAATCCTTGAATGTGATGATGGAAATGAGATCCTACAAAATTGCTCCCAACTCAATCAGTTATAATATATTGTTATCATGTCTGTGCAAAACTAGGAGAGTGAAGGAATCTTGTAAAATCCTCGAGATGATGAAACGAACGGGTTGTCGACCCGATTGCGTAAGCTATTATCTCATGGCGAGAGTGTTGTTCTTGACTGGAAGATTTGGGAAAGGGCGTGAAATTGTGGACAAGATGATTGAAGAAGGATTGACCCCGGATCGAAAATTCTACTACGAGTTGATTGGTATTCTGTGTGGTGTAGAGAGAACAAATTATGCACTTGAGCTTTTTGAGAAGATGAAGAGAAGCTCATTGGGGGGTTATGGACCAGTTTATGATGTGCTTATACCAAAGCTTTGTAGAGGAGGTGAATTTGAAATGGGGAGGCAACTGTGGGAGGAAGCCATGGCTATGGGTGTTTCGCTTAACTGCTCAAGTGAGATTTTGGATCCTTCAATCACAAAGGTTTTCAAGCCAACAAGAAAGATTGAGAATAAAATTGTTGAAGAATGCAATAGTGCTGAGAAGCAGAACAAAGCTGCAGCTGAGAAACCAAAAGAAAAGGGAAAGAAAGGTAAGTAAGAATCTGTCTTGAAAAATAGCTTCTTGAATTTTTTGGTACTTAGTCAAATTAAATCATTTCATAGGCCTCCTTGTTCAAGATTTGTATAGTAACTTAATAATACACCATAACATCTATCTATCTACACACAGAATGTACTCTTTTAAGCAAATCAGTTCTAGGCCTAAACGATTTTGAATGGAGATTTGGAAGATTTTTATCCTAAGATTGTGAGCCTCCACAATCATATCTAGTGTAGAAGATATGAAACTTTGATCGGTTGAGATCGAGATCGAGAATATATAGTTTATGTTAGCTAAGATGAATGTTGTATACATTTTCACTACATCCACTTTGTTTAGTTTGAGACATTAATTAATATAACATGGAAATGGTATTTTGTTCCTATTTAATTAAATATTATTTTTTAATGGAGAGTTTTTAATACTACAATTGTAAATGTAAAATCAAACTTTTGGTTATTTGGGTTATAATATAATTAATTTATTGCATTTACTATTGGAAATGAGAAGGAATAATCAATCAATAAAGTATAGTTTAAATTAAATTTAAAATAACTGAAAGAAAAAAGGGTAATTTAGTATTGAAATTTCAAGTAGAGAATTAAAATAAACAAAAATAGGAGTGTGGTGTCCAACTAATAATACGTTATTTCGCCATTTGACAGAAGGAGATACCAAGTCGGATTTTCTTCATATTTAA

mRNA sequence

ATGTCGCTGAGAAGAAGCGTTTCGTTGTTGAAGTTAAAATGGGATAGCTTCATTGCGCAATCCGTCTGTACGCAGCATCGGTTTTGTTCCCTTCATTCCACCGTAAACAATGGAGCTGCTGTATCAAAACTGTGTGAAGTGATTTCATGTACGATCGGTGGTTTAGATGAATTGGAATCCAGTTTGAACAAATGTACAATATCATTGACATCTTCATTAGTTACCCAAGTTATTGATTCTAGCAAAAATGAAGCTCCCACTAGAAGATTGCTTAGATTTTTTTTGTGGTCTCTCAAGAAGTTAAACCACACTTTAGAAGATGAAGATTTCAATAATGCCATCCGCTTTTTTGCTCAGAAGAAGGACTACACTGCCGTTTACATTTTACTTTCTAATCTTAAGAAAGCCGACCGGGCAATGGACGGCCAGACTTTCGGTTTTGTGGCTGAAGCTTTTGTCAAAATGGATCGAGAAGATGAAGCATTGGGTCTGTTCAAGAACCTGGAGAAGTACAAATGCCCACATGACCAATTTACTGTCGTAGCTATTATTACTGCTCTTTGTTCGAAAGGGCATGCTAAAAGAGCAGAAGGAGTTGTCTTGCACCACAAGGACAAGATTTCTAGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCTATTAAGAAGAACACAAAAGAAGCAAGAAGAATACTGACAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCTGCTACAACACTTTTCTCAAGTGTCTTTGTGAGAAAAATGTTGAGAAAAATCCTTCAGGTCTTGTGCCTGAATCCTTGAATGTGATGATGGAAATGAGATCCTACAAAATTGCTCCCAACTCAATCAGTTATAATATATTGTTATCATGTCTGTGCAAAACTAGGAGAGTGAAGGAATCTTGTAAAATCCTCGAGATGATGAAACGAACGGGTTGTCGACCCGATTGCGTAAGCTATTATCTCATGGCGAGAGTGTTGTTCTTGACTGGAAGATTTGGGAAAGGGCGTGAAATTGTGGACAAGATGATTGAAGAAGGATTGACCCCGGATCGAAAATTCTACTACGAGTTGATTGGTATTCTGTGTGGTGTAGAGAGAACAAATTATGCACTTGAGCTTTTTGAGAAGATGAAGAGAAGCTCATTGGGGGGTTATGGACCAGTTTATGATGTGCTTATACCAAAGCTTTGTAGAGGAGGTGAATTTGAAATGGGGAGGCAACTGTGGGAGGAAGCCATGGCTATGGGTGTTTCGCTTAACTGCTCAAGTGAGATTTTGGATCCTTCAATCACAAAGGTTTTCAAGCCAACAAGAAAGATTGAGAATAAAATTGTTGAAGAATGCAATAGTGCTGAGAAGCAGAACAAAGCTGCAGCTGAGAAACCAAAAGAAAAGGGAAAGAAAGAAGGAGATACCAAGTCGGATTTTCTTCATATTTAA

Coding sequence (CDS)

ATGTCGCTGAGAAGAAGCGTTTCGTTGTTGAAGTTAAAATGGGATAGCTTCATTGCGCAATCCGTCTGTACGCAGCATCGGTTTTGTTCCCTTCATTCCACCGTAAACAATGGAGCTGCTGTATCAAAACTGTGTGAAGTGATTTCATGTACGATCGGTGGTTTAGATGAATTGGAATCCAGTTTGAACAAATGTACAATATCATTGACATCTTCATTAGTTACCCAAGTTATTGATTCTAGCAAAAATGAAGCTCCCACTAGAAGATTGCTTAGATTTTTTTTGTGGTCTCTCAAGAAGTTAAACCACACTTTAGAAGATGAAGATTTCAATAATGCCATCCGCTTTTTTGCTCAGAAGAAGGACTACACTGCCGTTTACATTTTACTTTCTAATCTTAAGAAAGCCGACCGGGCAATGGACGGCCAGACTTTCGGTTTTGTGGCTGAAGCTTTTGTCAAAATGGATCGAGAAGATGAAGCATTGGGTCTGTTCAAGAACCTGGAGAAGTACAAATGCCCACATGACCAATTTACTGTCGTAGCTATTATTACTGCTCTTTGTTCGAAAGGGCATGCTAAAAGAGCAGAAGGAGTTGTCTTGCACCACAAGGACAAGATTTCTAGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCTATTAAGAAGAACACAAAAGAAGCAAGAAGAATACTGACAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCTGCTACAACACTTTTCTCAAGTGTCTTTGTGAGAAAAATGTTGAGAAAAATCCTTCAGGTCTTGTGCCTGAATCCTTGAATGTGATGATGGAAATGAGATCCTACAAAATTGCTCCCAACTCAATCAGTTATAATATATTGTTATCATGTCTGTGCAAAACTAGGAGAGTGAAGGAATCTTGTAAAATCCTCGAGATGATGAAACGAACGGGTTGTCGACCCGATTGCGTAAGCTATTATCTCATGGCGAGAGTGTTGTTCTTGACTGGAAGATTTGGGAAAGGGCGTGAAATTGTGGACAAGATGATTGAAGAAGGATTGACCCCGGATCGAAAATTCTACTACGAGTTGATTGGTATTCTGTGTGGTGTAGAGAGAACAAATTATGCACTTGAGCTTTTTGAGAAGATGAAGAGAAGCTCATTGGGGGGTTATGGACCAGTTTATGATGTGCTTATACCAAAGCTTTGTAGAGGAGGTGAATTTGAAATGGGGAGGCAACTGTGGGAGGAAGCCATGGCTATGGGTGTTTCGCTTAACTGCTCAAGTGAGATTTTGGATCCTTCAATCACAAAGGTTTTCAAGCCAACAAGAAAGATTGAGAATAAAATTGTTGAAGAATGCAATAGTGCTGAGAAGCAGAACAAAGCTGCAGCTGAGAAACCAAAAGAAAAGGGAAAGAAAGAAGGAGATACCAAGTCGGATTTTCTTCATATTTAA

Protein sequence

MSLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLCKTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKKEGDTKSDFLHI*

Homology

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BLAST of Chy2G047480 vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 2.3e-159
Identity = 269/473 (56.87%), Postives = 359/473 (75.90%), Query Frame = 0


Query: 10  LKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESSLNKCTISL 69
           ++L   +++  +      FCS H    +  A+ ++  ++S  +GGLD+LE +LN+ ++S 
Sbjct: 6   VRLNRFTYLTSTAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSP 65

Query: 70  TSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAVYIL 129
           +S+LVTQVI+S KNE   RRLLRFF WS K L  +L D++FN  +R  A+KKD+TA+ IL
Sbjct: 66  SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQIL 125

Query: 130 LSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTVVAIITALCS 189
           LS+L+K +RAMD QTF  VAE  VK+ +E++A+G+FK L+K+ CP D FTV AII+ALCS
Sbjct: 126 LSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCS 185

Query: 190 KGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKSDGTMPDLFC 249
           +GH KRA GV+ HHKD IS     +YRSLL+GWS+++N KEARR++ +MKS G  PDLFC
Sbjct: 186 RGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFC 245

Query: 250 YNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLCKTRRVKESC 309
           +N+ L CLCE+NV +NPSGLVPE+LN+M+EMRSYKI P S+SYNILLSCL +TRRV+ESC
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305

Query: 310 KILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRKFYYELIGIL 369
           +ILE MKR+GC PD  SYY + RVL+LTGRFGKG +IVD+MIE G  P+RKFYY+LIG+L
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVL 365

Query: 370 CGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNC 429
           CGVER N+AL+LFEKMKRSS+GGYG VYD+LIPKLC+GG FE GR+LWEEA+++ V+L+C
Sbjct: 366 CGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSC 425

Query: 430 SSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKKEGDTKS 483
           S  +LDPS+T+VFKP +  E   + +  +   +  A   K K K K +   +S
Sbjct: 426 SISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKRRS 478

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BLAST of Chy2G047480 vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.1e-43
Identity = 115/413 (27.85%), Postives = 201/413 (48.67%), Query Frame = 0


Query: 67  ISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAV 126
           I+    L+ Q ++ S      R  L F  W     N +  DE  +  + +F ++KD+  +
Sbjct: 105 ITPNPDLILQTLNLSPEAG--RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGM 164

Query: 127 YILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEK-YKCPHDQFTVVAIIT 186
             ++S  K       G+T     +  V+  R  +    F+ +E  Y    D+ ++  ++ 
Sbjct: 165 LEIISKYK---GIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVK 224

Query: 187 ALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKSDGTMP 246
            LC KGHA  AE +V +  ++I    + I   L+ GW I +   EA R+  EM   G   
Sbjct: 225 KLCEKGHASIAEKMVKNTANEIFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSRGGFEI 284

Query: 247 DLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLCKTRRV 306
               YN  L C+C+   +K+P  L PE   V++EM    +  N+ ++N+L++ LCK RR 
Sbjct: 285 GTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRT 344

Query: 307 KESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTP--DRKFYY 366
           +E+  +   M   GC+PD  +Y ++ R L+   R G+G E++DKM   G     ++K YY
Sbjct: 345 EEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYY 404

Query: 367 ELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAM 426
             + ILCG+ER  +A+ +F+ MK +        YD+L+ K+C   +      L++EA   
Sbjct: 405 GFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKK 464

Query: 427 GVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 477
           G++++     +DP   K  K T+++++ +        K+ +   EK   K K+
Sbjct: 465 GIAVSPKEYRVDPRFMK--KKTKEVDSNV--------KKRETLPEKTARKKKR 501

[Close]

BLAST of Chy2G047480 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.1e-32
Identity = 90/371 (24.26%), Postives = 174/371 (46.90%), Query Frame = 0


Query: 57  ELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRF 116
           +LE +LN+  + L   L+ +V++   +        RFF+W+ K+  +    E + + ++ 
Sbjct: 99  KLELALNESGVELRPGLIERVLNRCGDAGNLG--YRFFVWAAKQPRYCHSIEVYKSMVKI 158

Query: 117 FAQKKDYTAVYILLSNLKKAD-RAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPH 176
            ++ + + AV+ L+  ++K + + ++ + F  + + F   D   +A+ +   + K+    
Sbjct: 159 LSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEP 218

Query: 177 DQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL 236
           D++    ++ ALC  G  K A  +    + +    +   + SLLYGW       EA+ +L
Sbjct: 219 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR-YFTSLLYGWCRVGKMMEAKYVL 278

Query: 237 TEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNIL 296
            +M   G  PD+  Y   L            +G + ++ +++ +MR     PN+  Y +L
Sbjct: 279 VQMNEAGFEPDIVDYTNLLSGYAN-------AGKMADAYDLLRDMRRRGFEPNANCYTVL 338

Query: 297 LSCLCKTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGL 356
           +  LCK  R++E+ K+   M+R  C  D V+Y  +       G+  K   ++D MI++GL
Sbjct: 339 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 398

Query: 357 TPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQ 416
            P    Y  ++      E     LEL EKM++        +Y+V+I   C+ GE +   +
Sbjct: 399 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 458

Query: 417 LWEEAMAMGVS 427
           LW E    G+S
Sbjct: 459 LWNEMEENGLS 459

[Close]

BLAST of Chy2G047480 vs. ExPASy Swiss-Prot
Match: Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.0e-26
Identity = 91/400 (22.75%), Postives = 178/400 (44.50%), Query Frame = 0


Query: 41  VSKLCEVISCTIGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKK 100
           + K+C+ ++      +++   L+KC + +T SLV QV+    N     +   FF+W+  +
Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSN--GWNQAYGFFIWANSQ 161

Query: 101 LNHTLEDEDFNNAIRFFAQKKDYTAVYILLSNLKKAD--RAMDGQTFGFVAEAFVKMDRE 160
             +      +N  +    + +++  ++ L++ + K +  + +   T   V     K  + 
Sbjct: 162 TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKY 221

Query: 161 DEALGLFKNLEK-YKCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRS 220
           ++A+  F  +EK Y    D   + +++ AL  +   + A  V L   D I    +  +  
Sbjct: 222 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPD-ARTFNI 281

Query: 221 LLYGWSIKKNTKEARRILTEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVM 280
           L++G+   +   +AR ++  MK     PD+  Y +F++  C++   +  +        ++
Sbjct: 282 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN-------EML 341

Query: 281 MEMRSYKIAPNSISYNILLSCLCKTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLT 340
            EMR     PN ++Y I++  L K+++V E+  + E MK  GC PD   Y  +  +L  T
Sbjct: 342 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 401

Query: 341 GRFGKGREIVDKMIEEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGP-- 400
           GRF    EI + M  +G+  D   Y  +I       R   AL L ++M+        P  
Sbjct: 402 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 461

Query: 401 -VYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSSEIL 435
             Y  L+   C   + ++   L    +   VS++ S+ IL
Sbjct: 462 ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYIL 491

[Close]

BLAST of Chy2G047480 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.9e-26
Identity = 83/314 (26.43%), Postives = 140/314 (44.59%), Query Frame = 0


Query: 127 YILLSNLKKADRAMD-----GQ----TFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQ 186
           +  L N+ KA R M+     GQ     +  +   F KM+R D+A  +   +       D 
Sbjct: 134 FFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDT 193

Query: 187 FTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTE 246
            T   +I +LCS+G    A  V+              Y  L+    ++    EA +++ E
Sbjct: 194 VTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDE 253

Query: 247 MKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLS 306
           M S G  PD+F YNT ++ +C++       G+V  +  ++  +      P+ ISYNILL 
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKE-------GMVDRAFEMVRNLELKGCEPDVISYNILLR 313

Query: 307 CLCKTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTP 366
            L    + +E  K++  M    C P+ V+Y ++   L   G+  +   ++  M E+GLTP
Sbjct: 314 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 373

Query: 367 DRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLW 426
           D   Y  LI   C   R + A+E  E M           Y+ ++  LC+ G+ +   +++
Sbjct: 374 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 433

Query: 427 EEAMAMGVSLNCSS 432
            +   +G S N SS
Sbjct: 434 GKLGEVGCSPNSSS 440

[Close]

BLAST of Chy2G047480 vs. ExPASy TrEMBL
Match: A0A0A0LPF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1)

HSP 1 Score: 937.2 bits (2421), Expect = 2.8e-269
Identity = 467/476 (98.11%), Postives = 471/476 (98.95%), Query Frame = 0


Query: 1   MSLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 60
           MSLRR VSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES
Sbjct: 10  MSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 69

Query: 61  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 120
           SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK
Sbjct: 70  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 129

Query: 121 KDYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 180
           KDYTAV ILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV
Sbjct: 130 KDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 189

Query: 181 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKS 240
           VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL EMKS
Sbjct: 190 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKS 249

Query: 241 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLC 300
           DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKI+PNSISYNILLSCLC
Sbjct: 250 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLC 309

Query: 301 KTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRK 360
           KTRRVKESCKILEMMKRTGC+PDCVSYYLMARVLFLTGRFGKGREIVD+MIEEGLTPDRK
Sbjct: 310 KTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTPDRK 369

Query: 361 FYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 420
           FYY+LIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA
Sbjct: 370 FYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 429

Query: 421 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 477
           MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEE NSAEKQNKAAAEKPKEK KK
Sbjct: 430 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPKEKRKK 485

[Close]

BLAST of Chy2G047480 vs. ExPASy TrEMBL
Match: A0A5A7US52 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002610 PE=4 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 1.0e-263
Identity = 454/476 (95.38%), Postives = 468/476 (98.32%), Query Frame = 0


Query: 1   MSLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 60
           M LRR VSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES
Sbjct: 10  MPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 69

Query: 61  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 120
           SLN+CTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK
Sbjct: 70  SLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 129

Query: 121 KDYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 180
           KDYTA+ ILLSNLKKADRAMDGQTF FVAEAFVKM+R+DEALGLFKNLEKYKCPHDQFTV
Sbjct: 130 KDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKYKCPHDQFTV 189

Query: 181 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKS 240
           VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL EMKS
Sbjct: 190 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKS 249

Query: 241 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLC 300
           DGTMPDLF YNTFLKCLCEKNVEKNPSGLVPE+LNVMMEMRSYKIAPNSISYNILLSCLC
Sbjct: 250 DGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLSCLC 309

Query: 301 KTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRK 360
           KTRRVKESC+ILEMMKR+GCRPDCVSYYL+ARVLFLTGRFGKGREIVD+MIEEGLTPDRK
Sbjct: 310 KTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTPDRK 369

Query: 361 FYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 420
           FYYELIGILCGVERTNYA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGG+FEMGRQLWEEA
Sbjct: 370 FYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLWEEA 429

Query: 421 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 477
           MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECN+AEKQNKAAAEKP +K KK
Sbjct: 430 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPNKKRKK 485

[Close]

BLAST of Chy2G047480 vs. ExPASy TrEMBL
Match: A0A1S3BV55 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494008 PE=4 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 1.0e-263
Identity = 454/476 (95.38%), Postives = 468/476 (98.32%), Query Frame = 0


Query: 1   MSLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 60
           M LRR VSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES
Sbjct: 10  MPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 69

Query: 61  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 120
           SLN+CTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK
Sbjct: 70  SLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 129

Query: 121 KDYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 180
           KDYTA+ ILLSNLKKADRAMDGQTF FVAEAFVKM+R+DEALGLFKNLEKYKCPHDQFTV
Sbjct: 130 KDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKYKCPHDQFTV 189

Query: 181 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKS 240
           VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL EMKS
Sbjct: 190 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKS 249

Query: 241 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLC 300
           DGTMPDLF YNTFLKCLCEKNVEKNPSGLVPE+LNVMMEMRSYKIAPNSISYNILLSCLC
Sbjct: 250 DGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLSCLC 309

Query: 301 KTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRK 360
           KTRRVKESC+ILEMMKR+GCRPDCVSYYL+ARVLFLTGRFGKGREIVD+MIEEGLTPDRK
Sbjct: 310 KTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTPDRK 369

Query: 361 FYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 420
           FYYELIGILCGVERTNYA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGG+FEMGRQLWEEA
Sbjct: 370 FYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLWEEA 429

Query: 421 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 477
           MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECN+AEKQNKAAAEKP +K KK
Sbjct: 430 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPNKKRKK 485

[Close]

BLAST of Chy2G047480 vs. ExPASy TrEMBL
Match: A0A6J1JIV3 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484976 PE=4 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 6.7e-239
Identity = 408/476 (85.71%), Postives = 441/476 (92.65%), Query Frame = 0


Query: 1   MSLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 60
           MSLRR VSLLKLKWDSF  QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCTIGGLDELE+
Sbjct: 17  MSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCTIGGLDELEA 76

Query: 61  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 120
           +LNKCT+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN AIR FAQK
Sbjct: 77  TLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFNYAIRLFAQK 136

Query: 121 KDYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 180
           KDYTA+ ILLS+LKKA RAMDGQTFG VAEA VKMDREDEALGLFKNL+KYKCPHDQFTV
Sbjct: 137 KDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTV 196

Query: 181 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKS 240
            AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEARRIL EMKS
Sbjct: 197 TAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKS 256

Query: 241 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLC 300
           DGTMPDLF YNTFL+CLCE+N++KNPSGLVPE+LNVMMEMRSY IAPNSISYNILLSCL 
Sbjct: 257 DGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLG 316

Query: 301 KTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRK 360
           + RRVKESC+ILE MKRTGCRPDC+SYYL+ARVLFL+GRFGKG  IV++MIEEGL PDRK
Sbjct: 317 RARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRK 376

Query: 361 FYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 420
           FYY+LIGILCGVER  YALELFEKMKRSSLGGYGPVYDVLIPKLC GG+FEMGRQLW EA
Sbjct: 377 FYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFEMGRQLWGEA 436

Query: 421 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 477
           MAMG++L CSS++LDPSITKVFKPTRKI+N+ +EECN AEKQNKAA +K K +GKK
Sbjct: 437 MAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNKAATDKSKARGKK 492

[Close]

BLAST of Chy2G047480 vs. ExPASy TrEMBL
Match: A0A6J1E1S0 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111429800 PE=4 SV=1)

HSP 1 Score: 818.1 bits (2112), Expect = 1.9e-233
Identity = 401/475 (84.42%), Postives = 436/475 (91.79%), Query Frame = 0


Query: 2   SLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESS 61
           SLRR VSLLKLKWD    QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCTIGGLDELE++
Sbjct: 18  SLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCTIGGLDELEAT 77

Query: 62  LNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKK 121
           LNK T+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN AIR FAQKK
Sbjct: 78  LNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKK 137

Query: 122 DYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTVV 181
           DYTA+ ILLS+LKKA RAMDGQTFG VAEA VKMDREDEALGLFKNL+KYKCPHDQFTV 
Sbjct: 138 DYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVT 197

Query: 182 AIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKSD 241
           AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEARRIL EMKSD
Sbjct: 198 AIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSD 257

Query: 242 GTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLCK 301
           GTMPDLF YNTFL+CL E+N++KNPSGLVPE+LNVMMEMRSY IAPNSISYNILLSCL +
Sbjct: 258 GTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLGR 317

Query: 302 TRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRKF 361
            RRVKESC+ILE MKRTGCRPDC+SYYL+ARVLFL+GRFGKG  IV++MIEEGL PDRKF
Sbjct: 318 ARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKF 377

Query: 362 YYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAM 421
           YY+LIGILCGVE   YALELFEKMKRSSLGGYGPVYDVLIPKLCRGG+FEMGRQLWEEAM
Sbjct: 378 YYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAM 437

Query: 422 AMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 477
           AMG++L CSS++LDPSITKVFKPTRKI+N+ +EE + AEKQNKAA +K K +GK+
Sbjct: 438 AMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNKAATDKSKARGKR 492

[Close]

BLAST of Chy2G047480 vs. NCBI nr
Match: XP_004138304.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucumis sativus])

HSP 1 Score: 934 bits (2413), Expect = 0.0
Identity = 467/476 (98.11%), Postives = 471/476 (98.95%), Query Frame = 0


Query: 1   MSLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 60
           MSLRR VSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES
Sbjct: 10  MSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 69

Query: 61  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 120
           SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK
Sbjct: 70  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 129

Query: 121 KDYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 180
           KDYTAV ILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV
Sbjct: 130 KDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 189

Query: 181 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKS 240
           VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL EMKS
Sbjct: 190 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKS 249

Query: 241 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLC 300
           DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKI+PNSISYNILLSCLC
Sbjct: 250 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLC 309

Query: 301 KTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRK 360
           KTRRVKESCKILEMMKRTGC+PDCVSYYLMARVLFLTGRFGKGREIVD+MIEEGLTPDRK
Sbjct: 310 KTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTPDRK 369

Query: 361 FYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 420
           FYY+LIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA
Sbjct: 370 FYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 429

Query: 421 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 476
           MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEE NSAEKQNKAAAEKPKEK KK
Sbjct: 430 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPKEKRKK 485

[Close]

BLAST of Chy2G047480 vs. NCBI nr
Match: XP_008453221.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucumis melo] >KAA0057958.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 915 bits (2365), Expect = 0.0
Identity = 454/476 (95.38%), Postives = 468/476 (98.32%), Query Frame = 0


Query: 1   MSLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 60
           M LRR VSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES
Sbjct: 10  MPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 69

Query: 61  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 120
           SLN+CTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK
Sbjct: 70  SLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 129

Query: 121 KDYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 180
           KDYTA+ ILLSNLKKADRAMDGQTF FVAEAFVKM+R+DEALGLFKNLEKYKCPHDQFTV
Sbjct: 130 KDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKYKCPHDQFTV 189

Query: 181 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKS 240
           VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL EMKS
Sbjct: 190 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKS 249

Query: 241 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLC 300
           DGTMPDLF YNTFLKCLCEKNVEKNPSGLVPE+LNVMMEMRSYKIAPNSISYNILLSCLC
Sbjct: 250 DGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLSCLC 309

Query: 301 KTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRK 360
           KTRRVKESC+ILEMMKR+GCRPDCVSYYL+ARVLFLTGRFGKGREIVD+MIEEGLTPDRK
Sbjct: 310 KTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTPDRK 369

Query: 361 FYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 420
           FYYELIGILCGVERTNYA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGG+FEMGRQLWEEA
Sbjct: 370 FYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLWEEA 429

Query: 421 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 476
           MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECN+AEKQNKAAAEKP +K KK
Sbjct: 430 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPNKKRKK 485

[Close]

BLAST of Chy2G047480 vs. NCBI nr
Match: KAE8652422.1 (hypothetical protein Csa_013999 [Cucumis sativus])

HSP 1 Score: 878 bits (2269), Expect = 0.0
Identity = 435/446 (97.53%), Postives = 440/446 (98.65%), Query Frame = 0


Query: 1   MSLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 60
           MSLRR VSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES
Sbjct: 10  MSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 69

Query: 61  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 120
           SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK
Sbjct: 70  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 129

Query: 121 KDYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 180
           KDYTAV ILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV
Sbjct: 130 KDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 189

Query: 181 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKS 240
           VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL EMKS
Sbjct: 190 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKS 249

Query: 241 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLC 300
           DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKI+PNSISYNILLSCLC
Sbjct: 250 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLC 309

Query: 301 KTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRK 360
           KTRRVKESCKILEMMKRTGC+PDCVSYYLMARVLFLTGRFGKGREIVD+MIEEGLTPDRK
Sbjct: 310 KTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTPDRK 369

Query: 361 FYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 420
           FYY+LIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA
Sbjct: 370 FYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 429

Query: 421 MAMGVSLNCSSEILDPSITKVFKPTR 446
           MAMGVSLNCSSEILDPSITK   P+R
Sbjct: 430 MAMGVSLNCSSEILDPSITKKEIPSR 455

[Close]

BLAST of Chy2G047480 vs. NCBI nr
Match: XP_038878633.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Benincasa hispida])

HSP 1 Score: 850 bits (2195), Expect = 2.35e-308
Identity = 420/475 (88.42%), Postives = 446/475 (93.89%), Query Frame = 0


Query: 2   SLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESS 61
           SLRR VSLLKLKWDSF+ Q +CTQH FCSLHST+NNG +V KLCEVIS TIGGL+ELESS
Sbjct: 34  SLRRCVSLLKLKWDSFVVQPICTQHCFCSLHSTINNGTSVLKLCEVISLTIGGLNELESS 93

Query: 62  LNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKK 121
           LNKCTI LTSSLVTQVIDS KNE  TRRLLRFFLWSLKKLNH LEDE FN AIRFFAQKK
Sbjct: 94  LNKCTIPLTSSLVTQVIDSFKNEVHTRRLLRFFLWSLKKLNHDLEDEAFNYAIRFFAQKK 153

Query: 122 DYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTVV 181
           DYTA+ ILLSNLKKA+RAMDGQTFGFVAEA VKMDREDEALGLFKNL+KYKCPHDQFTV 
Sbjct: 154 DYTAIDILLSNLKKANRAMDGQTFGFVAEALVKMDREDEALGLFKNLDKYKCPHDQFTVT 213

Query: 182 AIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKSD 241
           AIITALC+KGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL EMKSD
Sbjct: 214 AIITALCAKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSD 273

Query: 242 GTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLCK 301
           GTMPDLFCYNTFLKCLCE+N+ KNPSGLVPE+LNVMMEMRSY+IAPNSISYNILLSCL +
Sbjct: 274 GTMPDLFCYNTFLKCLCEQNLAKNPSGLVPEALNVMMEMRSYRIAPNSISYNILLSCLGR 333

Query: 302 TRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRKF 361
           TRRVKESC IL+ MKR+GC+P+CVSYYL+ARVLFLTGRFGKGR IVD+MIEEGL PDRKF
Sbjct: 334 TRRVKESCTILKTMKRSGCQPNCVSYYLVARVLFLTGRFGKGRGIVDEMIEEGLIPDRKF 393

Query: 362 YYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAM 421
           YY+LIG+LCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGG+FE GRQLWEEAM
Sbjct: 394 YYDLIGVLCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEKGRQLWEEAM 453

Query: 422 AMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 476
           AMGV L+CSSE+LDPSITKVFKPTRKIENKI+EECN AEKQNKAA EKPKEK KK
Sbjct: 454 AMGVVLSCSSEVLDPSITKVFKPTRKIENKILEECNRAEKQNKAATEKPKEKRKK 508

[Close]

BLAST of Chy2G047480 vs. NCBI nr
Match: XP_022987424.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita maxima])

HSP 1 Score: 833 bits (2151), Expect = 6.00e-302
Identity = 408/476 (85.71%), Postives = 441/476 (92.65%), Query Frame = 0


Query: 1   MSLRRSVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELES 60
           MSLRR VSLLKLKWDSF  QSVCTQHRFCSLHSTV NGA+VSKLCEV+SCTIGGLDELE+
Sbjct: 17  MSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCTIGGLDELEA 76

Query: 61  SLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQK 120
           +LNKCT+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN AIR FAQK
Sbjct: 77  TLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFNYAIRLFAQK 136

Query: 121 KDYTAVYILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTV 180
           KDYTA+ ILLS+LKKA RAMDGQTFG VAEA VKMDREDEALGLFKNL+KYKCPHDQFTV
Sbjct: 137 KDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKYKCPHDQFTV 196

Query: 181 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKS 240
            AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEARRIL EMKS
Sbjct: 197 TAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKS 256

Query: 241 DGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLC 300
           DGTMPDLF YNTFL+CLCE+N++KNPSGLVPE+LNVMMEMRSY IAPNSISYNILLSCL 
Sbjct: 257 DGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLSCLG 316

Query: 301 KTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRK 360
           + RRVKESC+ILE MKRTGCRPDC+SYYL+ARVLFL+GRFGKG  IV++MIEEGL PDRK
Sbjct: 317 RARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRK 376

Query: 361 FYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEA 420
           FYY+LIGILCGVER  YALELFEKMKRSSLGGYGPVYDVLIPKLC GG+FEMGRQLW EA
Sbjct: 377 FYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFEMGRQLWGEA 436

Query: 421 MAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 476
           MAMG++L CSS++LDPSITKVFKPTRKI+N+ +EECN AEKQNKAA +K K +GKK
Sbjct: 437 MAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNKAATDKSKARGKK 492

[Close]

BLAST of Chy2G047480 vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 563.5 bits (1451), Expect = 1.6e-160
Identity = 269/473 (56.87%), Postives = 359/473 (75.90%), Query Frame = 0


Query: 10  LKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESSLNKCTISL 69
           ++L   +++  +      FCS H    +  A+ ++  ++S  +GGLD+LE +LN+ ++S 
Sbjct: 6   VRLNRFTYLTSTAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSP 65

Query: 70  TSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAVYIL 129
           +S+LVTQVI+S KNE   RRLLRFF WS K L  +L D++FN  +R  A+KKD+TA+ IL
Sbjct: 66  SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQIL 125

Query: 130 LSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTVVAIITALCS 189
           LS+L+K +RAMD QTF  VAE  VK+ +E++A+G+FK L+K+ CP D FTV AII+ALCS
Sbjct: 126 LSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCS 185

Query: 190 KGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKSDGTMPDLFC 249
           +GH KRA GV+ HHKD IS     +YRSLL+GWS+++N KEARR++ +MKS G  PDLFC
Sbjct: 186 RGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFC 245

Query: 250 YNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLCKTRRVKESC 309
           +N+ L CLCE+NV +NPSGLVPE+LN+M+EMRSYKI P S+SYNILLSCL +TRRV+ESC
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305

Query: 310 KILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTPDRKFYYELIGIL 369
           +ILE MKR+GC PD  SYY + RVL+LTGRFGKG +IVD+MIE G  P+RKFYY+LIG+L
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVL 365

Query: 370 CGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNC 429
           CGVER N+AL+LFEKMKRSS+GGYG VYD+LIPKLC+GG FE GR+LWEEA+++ V+L+C
Sbjct: 366 CGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSC 425

Query: 430 SSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKKEGDTKS 483
           S  +LDPS+T+VFKP +  E   + +  +   +  A   K K K K +   +S
Sbjct: 426 SISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKRRS 478

[Close]

BLAST of Chy2G047480 vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-44
Identity = 115/413 (27.85%), Postives = 201/413 (48.67%), Query Frame = 0


Query: 67  ISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAV 126
           I+    L+ Q ++ S      R  L F  W     N +  DE  +  + +F ++KD+  +
Sbjct: 105 ITPNPDLILQTLNLSPEAG--RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGM 164

Query: 127 YILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEK-YKCPHDQFTVVAIIT 186
             ++S  K       G+T     +  V+  R  +    F+ +E  Y    D+ ++  ++ 
Sbjct: 165 LEIISKYK---GIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVK 224

Query: 187 ALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTEMKSDGTMP 246
            LC KGHA  AE +V +  ++I    + I   L+ GW I +   EA R+  EM   G   
Sbjct: 225 KLCEKGHASIAEKMVKNTANEIFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSRGGFEI 284

Query: 247 DLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLSCLCKTRRV 306
               YN  L C+C+   +K+P  L PE   V++EM    +  N+ ++N+L++ LCK RR 
Sbjct: 285 GTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRT 344

Query: 307 KESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTP--DRKFYY 366
           +E+  +   M   GC+PD  +Y ++ R L+   R G+G E++DKM   G     ++K YY
Sbjct: 345 EEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYY 404

Query: 367 ELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAM 426
             + ILCG+ER  +A+ +F+ MK +        YD+L+ K+C   +      L++EA   
Sbjct: 405 GFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKK 464

Query: 427 GVSLNCSSEILDPSITKVFKPTRKIENKIVEECNSAEKQNKAAAEKPKEKGKK 477
           G++++     +DP   K  K T+++++ +        K+ +   EK   K K+
Sbjct: 465 GIAVSPKEYRVDPRFMK--KKTKEVDSNV--------KKRETLPEKTARKKKR 501

[Close]

BLAST of Chy2G047480 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-33
Identity = 90/371 (24.26%), Postives = 174/371 (46.90%), Query Frame = 0


Query: 57  ELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRF 116
           +LE +LN+  + L   L+ +V++   +        RFF+W+ K+  +    E + + ++ 
Sbjct: 99  KLELALNESGVELRPGLIERVLNRCGDAGNLG--YRFFVWAAKQPRYCHSIEVYKSMVKI 158

Query: 117 FAQKKDYTAVYILLSNLKKAD-RAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKYKCPH 176
            ++ + + AV+ L+  ++K + + ++ + F  + + F   D   +A+ +   + K+    
Sbjct: 159 LSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEP 218

Query: 177 DQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL 236
           D++    ++ ALC  G  K A  +    + +    +   + SLLYGW       EA+ +L
Sbjct: 219 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR-YFTSLLYGWCRVGKMMEAKYVL 278

Query: 237 TEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNIL 296
            +M   G  PD+  Y   L            +G + ++ +++ +MR     PN+  Y +L
Sbjct: 279 VQMNEAGFEPDIVDYTNLLSGYAN-------AGKMADAYDLLRDMRRRGFEPNANCYTVL 338

Query: 297 LSCLCKTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGL 356
           +  LCK  R++E+ K+   M+R  C  D V+Y  +       G+  K   ++D MI++GL
Sbjct: 339 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 398

Query: 357 TPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQ 416
            P    Y  ++      E     LEL EKM++        +Y+V+I   C+ GE +   +
Sbjct: 399 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 458

Query: 417 LWEEAMAMGVS 427
           LW E    G+S
Sbjct: 459 LWNEMEENGLS 459

[Close]

BLAST of Chy2G047480 vs. TAIR 10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 2.1e-27
Identity = 91/400 (22.75%), Postives = 178/400 (44.50%), Query Frame = 0


Query: 41  VSKLCEVISCTIGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKK 100
           + K+C+ ++      +++   L+KC + +T SLV QV+    N     +   FF+W+  +
Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSN--GWNQAYGFFIWANSQ 161

Query: 101 LNHTLEDEDFNNAIRFFAQKKDYTAVYILLSNLKKAD--RAMDGQTFGFVAEAFVKMDRE 160
             +      +N  +    + +++  ++ L++ + K +  + +   T   V     K  + 
Sbjct: 162 TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKY 221

Query: 161 DEALGLFKNLEK-YKCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRS 220
           ++A+  F  +EK Y    D   + +++ AL  +   + A  V L   D I    +  +  
Sbjct: 222 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPD-ARTFNI 281

Query: 221 LLYGWSIKKNTKEARRILTEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVM 280
           L++G+   +   +AR ++  MK     PD+  Y +F++  C++   +  +        ++
Sbjct: 282 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN-------EML 341

Query: 281 MEMRSYKIAPNSISYNILLSCLCKTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLT 340
            EMR     PN ++Y I++  L K+++V E+  + E MK  GC PD   Y  +  +L  T
Sbjct: 342 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 401

Query: 341 GRFGKGREIVDKMIEEGLTPDRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGP-- 400
           GRF    EI + M  +G+  D   Y  +I       R   AL L ++M+        P  
Sbjct: 402 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 461

Query: 401 -VYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSSEIL 435
             Y  L+   C   + ++   L    +   VS++ S+ IL
Sbjct: 462 ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYIL 491

[Close]

BLAST of Chy2G047480 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 2.8e-27
Identity = 83/314 (26.43%), Postives = 140/314 (44.59%), Query Frame = 0


Query: 127 YILLSNLKKADRAMD-----GQ----TFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQ 186
           +  L N+ KA R M+     GQ     +  +   F KM+R D+A  +   +       D 
Sbjct: 134 FFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDT 193

Query: 187 FTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILTE 246
            T   +I +LCS+G    A  V+              Y  L+    ++    EA +++ E
Sbjct: 194 VTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDE 253

Query: 247 MKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKIAPNSISYNILLS 306
           M S G  PD+F YNT ++ +C++       G+V  +  ++  +      P+ ISYNILL 
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKE-------GMVDRAFEMVRNLELKGCEPDVISYNILLR 313

Query: 307 CLCKTRRVKESCKILEMMKRTGCRPDCVSYYLMARVLFLTGRFGKGREIVDKMIEEGLTP 366
            L    + +E  K++  M    C P+ V+Y ++   L   G+  +   ++  M E+GLTP
Sbjct: 314 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 373

Query: 367 DRKFYYELIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLW 426
           D   Y  LI   C   R + A+E  E M           Y+ ++  LC+ G+ +   +++
Sbjct: 374 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 433

Query: 427 EEAMAMGVSLNCSS 432
            +   +G S N SS
Sbjct: 434 GKLGEVGCSPNSSS 440

The following BLAST results are available for this feature:

BLAST of Chy2G047480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLJ6	2.3e-159	56.87	Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop...	[more]
Q9FME4	2.1e-43	27.85	Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t...	[more]
Q9FH87	2.1e-32	24.26	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]
Q9LUJ4	3.0e-26	22.75	Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop...	[more]
Q9SR00	3.9e-26	26.43	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]

BLAST of Chy2G047480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPF4	2.8e-269	98.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1	[more]
A0A5A7US52	1.0e-263	95.38	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BV55	1.0e-263	95.38	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis ...	[more]
A0A6J1JIV3	6.7e-239	85.71	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit...	[more]
A0A6J1E1S0	1.9e-233	84.42	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit...	[more]

BLAST of Chy2G047480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138304.1	0.0	98.11	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucumis sa...	[more]
XP_008453221.1	0.0	95.38	PREDICTED: pentatricopeptide repeat-containing protein At5g61370, mitochondrial ...	[more]
KAE8652422.1	0.0	97.53	hypothetical protein Csa_013999 [Cucumis sativus]	[more]
XP_038878633.1	2.35e-308	88.42	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Benincasa ...	[more]
XP_022987424.1	6.00e-302	85.71	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ...	[more]

BLAST of Chy2G047480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61370.1	1.6e-160	56.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G60960.1	1.5e-44	27.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G65820.1	1.5e-33	24.26	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G22670.1	2.1e-27	22.75	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G04760.1	2.8e-27	26.43	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 449..469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 459..487
None	No IPR available	PANTHER	PTHR47938:SF9	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 26..474
None	No IPR available	PANTHER	PTHR47938	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	coord: 26..474
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 215..256 e-value: 2.2E-4 score: 21.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 365..388 e-value: 1.0 score: 9.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 287..330 e-value: 1.6E-10 score: 41.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 396..429 e-value: 9.8E-4 score: 17.1 coord: 325..358 e-value: 5.4E-4 score: 18.0 coord: 290..324 e-value: 4.0E-10 score: 37.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 288..322 score: 12.868624
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 323..357 score: 9.251395
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 267..483 e-value: 9.8E-29 score: 102.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 205..265 e-value: 2.9E-7 score: 32.2 coord: 54..204 e-value: 8.5E-11 score: 43.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 289..384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G047480.1	Chy2G047480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding