Chy2G047160 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTGGGTTATGCCTGCTTTAGCTATTGGGCTTCTTATTCTAGCCATGACTGACCATTCAAGTAAGCTCCCTGCATTTTTTTTTTATGTGTTTTGTTATCTACCTTTGTAGTGTACACTAAAGTCATAATGCTTGTATTTTTTACTTCTCACTAATCTTTTGGCTGATTCAAGCATTTTGCCTGTGAGTAATCTTTAAAGGCTATGAAAATGTGCTGAATGTGTGCTTGAACCTCTTTGCTGAAATGTGTCAATAGATCTTCTAGTTATATGTTCTTTGGTTTAAAAGTTTTTCAGTTTGAAATTTGTGGTTGTTTTTGGATGGATAAGGGGTTTAAACATTCTGGGAGTTTTCTTTACTTTTGAAGTTTGTTATAGATGGCTAGATCTTGTTGTGTTTGGTTTATTTTCTTTCGTTTCTTACACAGTCTTTGGTTTCTTTTGACTGTCTCTTGAAATGGTGGTTTCTGGAACTTGTAGGTGCAACGTGGTGTGTTTGTAGGGATGGATTGGCTGATACAGTTCTCCAAAAGACACTGGACTTTGCTTGTGGAGCTGGGGCTGACTGTGGCTCTATTCATCAAAATGGGGGCTGTTACTTTCCCAACACTGTTAAGGCTCATTGTTCCTTTGCTACTAATAGCTACTTTCAGAGGAAGGGTCAAGCTCCAGGTTCCTGTGATTTTTCTGGCACGGCAGCGGTCACCACTTCTGACCCCAGTAAGATTTTGCTGTCTGCTATCTCCTAATGTTTTTTCTCTAGTTCATTCTAAATGAGAGAAGTTTCAGTCAGTTAAGATCTGATTAACTTCGACAAGAGGACAAATGGAAAAACCCCACCTTGGAACTAAATTGGATTCTAGTTATAGGTCATTAGTTTTAAACTCTACGGCAATCTGTCTGAGCTACTTATTTCAAAGTTCGTTGGTCATCTATTTCAGCTACTAAGTTAAACGGTGTTTTGTTTTCATATTTCTTATCATGTTGAGAAATAAGAATCTGATTTCTTTTTTTCAATATCTTGGTGTTTTCTCAGGCATTTCAGGTTGTGCTTATCCTTCTAGCGCCAGGTATACTTCGACACCTACTTTCACCATGTTTATTTGAACTGATAAATGAAAGTTAGGAATAGTAATAATTTGTTTCCATTTCTATTTCTGGAAATTGCTTTATTAGAATGAGGTCTTCTCTGCTTTCTTCCGAATCCAAGAATGAGTTCTGAATCTGGAGGACAATGACATTCTCTCTAGAGTTAGTGAGACTCACAATCTCGTTTATGTTTTCTCATTTAGTGAACTCCATTACCTTTTTTTTTTCCTTTTATGTTTATTATGAGCTTCACCTGGACTTTTTATCCACTTTATAATCTTGTTCGTTAGCATAATATTAAAAGTGTTTTTACTTTATCTTTTATTTTCATTTGATCAAAAGGAAAGCCTTTTTTCTTGAACAGGATTAGAGCATATTTTTAATTAAAAAACTTAACAAAAATGAAAGTAATTAGCTTTTCATAACCATAGTTCCTGTTGGAAAAGAGACTTTTGCCATTAGATTCGTCACCATCCCAATTTTCTGTAATCATAGATACTCTTTTTGTCAATTGACTATTTGTGATTTCATGATCATTTTTTTTTTGGTTTCTTCTCTTGGACTGTGTTTTTCAACTTTTCACATTCACTCAAGAGGTTATTATTGTTTCCCCCATTGTTGTCTTTAACCTCAAATGTAAAGTTATAAACACTCCATACGGGTAAATATATTTATTTCTAAGATTTTGCGAGGTGGAAAGTGGAGTTTTCCATAGTATTGATCAGATTTATGTTACTCCTCGAGATAGTAAATCATTGAGATTTGAGCCGCATTTTAATGCCTCGAAAGCCAATTCTAGGCAGCCAGACCATGATTTTTGGAGAAAGGGTTTCACATGTGAAGGGAAGGAAGGTTTGCTGAAGCACTTTATTTTCTTGGGGCAGAAGTGTTTGTCTTTTCTCTTGGAGCTAATTTGAAATGTTCTTGTCAAAAACTGTTTAATTTCTGAGGTTAATTTTCCATGTAGAAAGGATCAAAGATGAGCCTTATCACAATGACAACTTTTCTTTTATCTTCATATAGATAAAAAAAAAAAAAAGGAAAAGAAAAACTGCCTTATCCAAAACGAACCATTACTTTATTACTGAATCCAAACCTTTTTACTTCTAAAATCCCATCTTATCTAAGTTGGGATTCATTTGATTTTTGGTAACTTCTTGTTGCAGCCCTGTAAACAGTGGCACTATTCCAGTAACTGGGACTCCAACCACCACCAACCCGGTCAATGGATTAACTCCCACAACCAACACCCCATTTGGTTCTACTACGCCCACCGGCGTCCTCGGCGGGAACGGATTTGGTAGTGGCAACAACAACGGTCTAGGACCATCAGGAGTTGGCGGGATGAACACGGACTACAGCAAAGGCGGATCAAGACTCCAACTCACTCTAATTGCCAATGTAGTTGGTTTCTTATTCACACTCTTGTTATGTGGGCATATGGTTTGA ATGTCCTGGGTTATGCCTGCTTTAGCTATTGGGCTTCTTATTCTAGCCATGACTGACCATTCAAGTGCAACGTGGTGTGTTTGTAGGGATGGATTGGCTGATACAGTTCTCCAAAAGACACTGGACTTTGCTTGTGGAGCTGGGGCTGACTGTGGCTCTATTCATCAAAATGGGGGCTGTTACTTTCCCAACACTGTTAAGGCTCATTGTTCCTTTGCTACTAATAGCTACTTTCAGAGGAAGGGTCAAGCTCCAGGTTCCTGTGATTTTTCTGGCACGGCAGCGGTCACCACTTCTGACCCCAGCATTTCAGGTTGTGCTTATCCTTCTAGCGCCAGCCCTGTAAACAGTGGCACTATTCCAGTAACTGGGACTCCAACCACCACCAACCCGGTCAATGGATTAACTCCCACAACCAACACCCCATTTGGTTCTACTACGCCCACCGGCGTCCTCGGCGGGAACGGATTTGGTAGTGGCAACAACAACGGTCTAGGACCATCAGGAGTTGGCGGGATGAACACGGACTACAGCAAAGGCGGATCAAGACTCCAACTCACTCTAATTGCCAATGTAGTTGGTTTCTTATTCACACTCTTGTTATGTGGGCATATGGTTTGA ATGTCCTGGGTTATGCCTGCTTTAGCTATTGGGCTTCTTATTCTAGCCATGACTGACCATTCAAGTGCAACGTGGTGTGTTTGTAGGGATGGATTGGCTGATACAGTTCTCCAAAAGACACTGGACTTTGCTTGTGGAGCTGGGGCTGACTGTGGCTCTATTCATCAAAATGGGGGCTGTTACTTTCCCAACACTGTTAAGGCTCATTGTTCCTTTGCTACTAATAGCTACTTTCAGAGGAAGGGTCAAGCTCCAGGTTCCTGTGATTTTTCTGGCACGGCAGCGGTCACCACTTCTGACCCCAGCATTTCAGGTTGTGCTTATCCTTCTAGCGCCAGCCCTGTAAACAGTGGCACTATTCCAGTAACTGGGACTCCAACCACCACCAACCCGGTCAATGGATTAACTCCCACAACCAACACCCCATTTGGTTCTACTACGCCCACCGGCGTCCTCGGCGGGAACGGATTTGGTAGTGGCAACAACAACGGTCTAGGACCATCAGGAGTTGGCGGGATGAACACGGACTACAGCAAAGGCGGATCAAGACTCCAACTCACTCTAATTGCCAATGTAGTTGGTTTCTTATTCACACTCTTGTTATGTGGGCATATGGTTTGA MSWVMPALAIGLLILAMTDHSSATWCVCRDGLADTVLQKTLDFACGAGADCGSIHQNGGCYFPNTVKAHCSFATNSYFQRKGQAPGSCDFSGTAAVTTSDPSISGCAYPSSASPVNSGTIPVTGTPTTTNPVNGLTPTTNTPFGSTTPTGVLGGNGFGSGNNNGLGPSGVGGMNTDYSKGGSRLQLTLIANVVGFLFTLLLCGHMV* Homology
BLAST of Chy2G047160 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 9.4e-38 Identity = 100/198 (50.51%), Postives = 127/198 (64.14%), Query Frame = 0
BLAST of Chy2G047160 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.2e-37 Identity = 89/191 (46.60%), Postives = 118/191 (61.78%), Query Frame = 0
BLAST of Chy2G047160 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 4.6e-37 Identity = 92/193 (47.67%), Postives = 124/193 (64.25%), Query Frame = 0
BLAST of Chy2G047160 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.8e-25 Identity = 85/211 (40.28%), Postives = 115/211 (54.50%), Query Frame = 0
BLAST of Chy2G047160 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.5e-19 Identity = 70/173 (40.46%), Postives = 95/173 (54.91%), Query Frame = 0
BLAST of Chy2G047160 vs. ExPASy TrEMBL
Match: A0A0A0LSF3 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G013210 PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101 Identity = 196/206 (95.15%), Postives = 197/206 (95.63%), Query Frame = 0
BLAST of Chy2G047160 vs. ExPASy TrEMBL
Match: A0A5A7US74 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002920 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.1e-100 Identity = 191/206 (92.72%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of Chy2G047160 vs. ExPASy TrEMBL
Match: A0A1S3BVT1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103494037 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.1e-100 Identity = 191/206 (92.72%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of Chy2G047160 vs. ExPASy TrEMBL
Match: A0A6J1E2D5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430147 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 6.0e-88 Identity = 166/205 (80.98%), Postives = 184/205 (89.76%), Query Frame = 0
BLAST of Chy2G047160 vs. ExPASy TrEMBL
Match: A0A6J1JDI8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita maxima OX=3661 GN=LOC111485814 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 7.3e-86 Identity = 164/205 (80.00%), Postives = 182/205 (88.78%), Query Frame = 0
BLAST of Chy2G047160 vs. NCBI nr
Match: XP_004138193.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >KGN63722.1 hypothetical protein Csa_013700 [Cucumis sativus]) HSP 1 Score: 379 bits (974), Expect = 3.51e-132 Identity = 196/206 (95.15%), Postives = 197/206 (95.63%), Query Frame = 0
BLAST of Chy2G047160 vs. NCBI nr
Match: KAA0057988.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo var. makuwa]) HSP 1 Score: 374 bits (960), Expect = 4.96e-130 Identity = 191/206 (92.72%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of Chy2G047160 vs. NCBI nr
Match: XP_008453264.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo]) HSP 1 Score: 374 bits (960), Expect = 5.50e-129 Identity = 191/206 (92.72%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of Chy2G047160 vs. NCBI nr
Match: XP_038878558.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]) HSP 1 Score: 355 bits (912), Expect = 1.18e-122 Identity = 182/205 (88.78%), Postives = 188/205 (91.71%), Query Frame = 0
BLAST of Chy2G047160 vs. NCBI nr
Match: XP_023515396.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 335 bits (860), Expect = 8.31e-115 Identity = 168/205 (81.95%), Postives = 184/205 (89.76%), Query Frame = 0
BLAST of Chy2G047160 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 ) HSP 1 Score: 158.3 bits (399), Expect = 6.7e-39 Identity = 100/198 (50.51%), Postives = 127/198 (64.14%), Query Frame = 0
BLAST of Chy2G047160 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 ) HSP 1 Score: 157.9 bits (398), Expect = 8.7e-39 Identity = 89/191 (46.60%), Postives = 118/191 (61.78%), Query Frame = 0
BLAST of Chy2G047160 vs. TAIR 10
Match: AT5G08000.1 (glucan endo-1,3-beta-glucosidase-like protein 3 ) HSP 1 Score: 156.0 bits (393), Expect = 3.3e-38 Identity = 92/193 (47.67%), Postives = 124/193 (64.25%), Query Frame = 0
BLAST of Chy2G047160 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-32 Identity = 81/165 (49.09%), Postives = 102/165 (61.82%), Query Frame = 0
BLAST of Chy2G047160 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 131.7 bits (330), Expect = 6.7e-31 Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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