Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAGCCATTGTTCAACGTCTTGAGATGGATGGGATCCATTATGCTGATCTTCATAGAGATCTTGAATTTCTTGAACAAAAGCTGGACAATTATCAGCAAGGTCTAGAGAGCTCATTGCCAATGTTAGGAAAAATGAACTCGTTGTTCAACGCCTCTCTCAAAGGCAAGAAATGCGGTTCATCACGCTGA mRNA sequence ATGAAAGCCATTGTTCAACGTCTTGAGATGGATGGGATCCATTATGCTGATCTTCATAGAGATCTTGAATTTCTTGAACAAAAGCTGGACAATTATCAGCAAGGTCTAGAGAGCTCATTGCCAATGTTAGGAAAAATGAACTCGTTGTTCAACGCCTCTCTCAAAGGCAAGAAATGCGGTTCATCACGCTGA Coding sequence (CDS) ATGAAAGCCATTGTTCAACGTCTTGAGATGGATGGGATCCATTATGCTGATCTTCATAGAGATCTTGAATTTCTTGAACAAAAGCTGGACAATTATCAGCAAGGTCTAGAGAGCTCATTGCCAATGTTAGGAAAAATGAACTCGTTGTTCAACGCCTCTCTCAAAGGCAAGAAATGCGGTTCATCACGCTGA Protein sequence MKAIVQRLEMDGIHYADLHRDLEFLEQKLDNYQQGLESSLPMLGKMNSLFNASLKGKKCGSSR*
Homology
BLAST of Chy2G047140 vs. NCBI nr
Match: KAE8652433.1 (hypothetical protein Csa_013852 [Cucumis sativus]) HSP 1 Score: 120 bits (301), Expect = 1.12e-32 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
Query: 1 MKAIVQRLEMDGIHYADLHRDLEFLEQKLDNYQQGLESSLPMLGKMNSLFNASLKGKKCG 60
MKAIVQRLEMD IHYADLHRDLEF EQKLDN+QQGLESSLPMLGKMNSLFNASLKGK CG
Sbjct: 115 MKAIVQRLEMDEIHYADLHRDLEFREQKLDNHQQGLESSLPMLGKMNSLFNASLKGKTCG 174
Query: 61 SSR 63
SSR
Sbjct: 175 SSR 177
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAE8652433.1 | 1.12e-32 | 93.65 | hypothetical protein Csa_013852 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 15..35 |
Relationships
The following mRNA feature(s) are a part of this gene:
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