Chy2G046930 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G046930
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH02: 27949351 .. 27951426 (-)
RNA-Seq Expression	Chy2G046930
Synteny	Chy2G046930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAAACAAGAAACAAAAACGCAAAGGCAAAGAAGAGGGACCGAGCTCGAACGATAGCAAAACGATTTAGAGTCGAGAACTTTATAAGGCAAAAACTTCTTCTGACAGAGAAGCTTGAAAAGGCCTCAAAGGAAAGAATTGAGGTAAGAGCTTTGCATGAAATCAAGTTTGGGATATCATTCACAATTCCTGATAGAATGGCTACAGAAATTAGTGATAAGAAAAGGATAAGTGGATTACATCCATTGAGGATCACAAGAGTTCCATATGGAGGGCCAATGGAGTTTCACGAAATTGTAAAAGAGGCTGAGAAAGGTTCAGCTCCATTGAAGAATCAGCAAAAAGGGAAGCCACCAAATCCTAAAGCAGCATATCATAGGAGTTGCTTGAATGAATGGCATCCTCAAGTGTTTCATTTCAACTCTAATTCTTATTTGTCCTGAAAAGTTTGGGGGAGTTGTAGTTTGAAAGGGAATCAGTAAGAATAACTCTAATCGAATAAAACCAAATCACTTATTCGTACATTTTATCGTAAAATTGTGAGACTAAAAAAGTTATTCATAAAATGCTGATAAAATGCATTCTTCAATGTGTAAGGATCAACCCAACCCATATTGACGGAACCCAACCCATATTGACTGGTTGATTCTTCGGTTTGTAACTTTTTTTTTTAATATAATAGACGCTTTTTAGATTGTTTTTCCACAAACAATTCTATGCAAAAACCACCCTGAATTAATACAAACTTCAAAAGAAACTAATTCAAATGTTCAAATTCAAAGTGCATATTAAGTCACATTCAAATTCATTCGAAATTGGAATAAAAAAGTCCAACGCTCAATAATAACTATTAGCCTATTACCCAAAAAAATAAAAATAAAAAGTACAAGCAACACCATGATAGTTTTGAGTGAATCTTGTTCTTTGTTTCTTTTATCTCACTTTTGAAAATAAATACAAATACATTAAATTGTATATACGCAAGTAATAATATATTATGTTAAAGTAGAAAAACTTACACTAACAAGTTCTTGCTTCAAATCCAATCCAACAAAACTAATAAATATGTAGCACAATACATGTTAGACATGTAGAAATAGAAGAAAAAAAGAGCAAGCCTAAATATTTTCACAAACCTCTAAACTCTTCAAGTTTTATTAATAATTATTTGTGAAATAAATTATAATGTGAACACATAGTAGATAGAGTGAAGTATGAAAAAATTCTCCCTCAAATAACAATTTACATGTTAGACATATTCAATAAAATTATTATTGATTTTTTACGAAAACTTATTATCTATTGGCATTCTTATATTACCATTTTATTTTCTTATATTGCCATTCTATATTTTACATGGACTAAAATTAACGATTTAGAAATTATAAATTTAAAAGAAAAAAGCATATGGACTAAAATTAAAGAATTAGAAATTATAGAACACCCAAAATAGAATTGAAATGCATTGTATTATAATAAAAAAAATTATGTTTTGTTTGATTTGGGATGGGATCACACAATTAATATCTATTGATGATTATATAATCGAAATATTTGTTATACTCCATGGCTTCGGTCTTATTAAATGTATAGAAATTGCAACCATATAGGATAAATATGTACCAAAGAAAATCAAATGAACTACAAGTTGAGCTTCTAAACTGAAATTAAAGTTTAAAATATATATTTTTCATAACAAACCAACTCAACTAACTCTCACAAGATGATCAAGAAAATTTAGCCTTTAAAAATCGAAATTGTTTATTAATTTGCTTAATCAACACCCAACCCTAAACTATATAACAAACGATTGGATGAAACGGAGTGAAGAAATATAGACCGTTGTATATTAAATACCAAAAATTAGTCTGCCTGAAATCATGGCAATGAATGTTAAAATTTTAATGGAGAGTGAACTGACGTTTTGGCAATACAATTGCACCACAAAGGGCAAAAGTTTCAAGTGTGGTTCTTCAGATGAGGGACTAAAAGTTGAAGAGAAACGGCCTTCGAGTTCTCGAAACATGGGACACTTGGTGTTTGGAAGAGAGTATCCTGAGAGAGTTAGCTGA

mRNA sequence

ATGGCCAAAACAAGAAACAAAAACGCAAAGGCAAAGAAGAGGGACCGAGCTCGAACGATAGCAAAACGATTTAGAGTCGAGAACTTTATAAGGCAAAAACTTCTTCTGACAGAGAAGCTTGAAAAGGCCTCAAAGGAAAGAATTGAGGTAAGAGCTTTGCATGAAATCAAGTTTGGGATATCATTCACAATTCCTGATAGAATGGCTACAGAAATTAGTGATAAGAAAAGGATAAGTGGATTACATCCATTGAGGATCACAAGAGTTCCATATGGAGGGCCAATGGAGTTTCACGAAATTGTAAAAGAGGCTGAGAAAGGTTCAGCTCCATTGAAGAATCAGCAAAAAGGGAAGCCACCAAATCCTAAAGCAGCATATCATAGGAGTTGCTTGAATGAATGGCATCCTCAAGGCAAAAGTTTCAAGTGTGGTTCTTCAGATGAGGGACTAAAAGTTGAAGAGAAACGGCCTTCGAGTTCTCGAAACATGGGACACTTGGTGTTTGGAAGAGAGTATCCTGAGAGAGTTAGCTGA

Coding sequence (CDS)

ATGGCCAAAACAAGAAACAAAAACGCAAAGGCAAAGAAGAGGGACCGAGCTCGAACGATAGCAAAACGATTTAGAGTCGAGAACTTTATAAGGCAAAAACTTCTTCTGACAGAGAAGCTTGAAAAGGCCTCAAAGGAAAGAATTGAGGTAAGAGCTTTGCATGAAATCAAGTTTGGGATATCATTCACAATTCCTGATAGAATGGCTACAGAAATTAGTGATAAGAAAAGGATAAGTGGATTACATCCATTGAGGATCACAAGAGTTCCATATGGAGGGCCAATGGAGTTTCACGAAATTGTAAAAGAGGCTGAGAAAGGTTCAGCTCCATTGAAGAATCAGCAAAAAGGGAAGCCACCAAATCCTAAAGCAGCATATCATAGGAGTTGCTTGAATGAATGGCATCCTCAAGGCAAAAGTTTCAAGTGTGGTTCTTCAGATGAGGGACTAAAAGTTGAAGAGAAACGGCCTTCGAGTTCTCGAAACATGGGACACTTGGTGTTTGGAAGAGAGTATCCTGAGAGAGTTAGCTGA

Protein sequence

MAKTRNKNAKAKKRDRARTIAKRFRVENFIRQKLLLTEKLEKASKERIEVRALHEIKFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPPNPKAAYHRSCLNEWHPQGKSFKCGSSDEGLKVEEKRPSSSRNMGHLVFGREYPERVS*

Homology

[Close]

BLAST of Chy2G046930 vs. ExPASy TrEMBL
Match: A0A0A0LRV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014460 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.6e-66
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAKTRNKNAKAKKRDRARTIAKRFRVENFIRQKLLLTEKLEKASKERIEVRALHEIKFGI 60
           MAKTRNKN KAKKRDRARTIAKRFRVENF RQKL+LTEKLE+ SKER+EVRALHEIKFGI
Sbjct: 1   MAKTRNKNIKAKKRDRARTIAKRFRVENFTRQKLVLTEKLEETSKERMEVRALHEIKFGI 60

Query: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120
           SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP
Sbjct: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120

Query: 121 NPKAAYHRSCLNEWHPQ 138
           NPKAAYHRSCLNEWHPQ
Sbjct: 121 NPKAAYHRSCLNEWHPQ 137

[Close]

BLAST of Chy2G046930 vs. ExPASy TrEMBL
Match: A0A5D3DX07 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00030 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.7e-52
Identity = 111/137 (81.02%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 1   MAKTRNKNAKAKKRDRARTIAKRFRVENFIRQKLLLTEKLEKASKERIEVRALHEIKFGI 60
           MAKTRNKN K KKRD+ARTIAK+FRV         L EKLE+ASKER+EVR LH+IKFGI
Sbjct: 1   MAKTRNKNTKMKKRDQARTIAKQFRV---------LKEKLEEASKERMEVRTLHKIKFGI 60

Query: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120
           SFTIPDRMATEI+DKK ISGL PLRITRVP GGPMEFHEIVKEAEKGSAPLKN +KGKPP
Sbjct: 61  SFTIPDRMATEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHKKGKPP 120

Query: 121 NPKAAYHRSCLNEWHPQ 138
           NPK AYHRSC NEWHPQ
Sbjct: 121 NPKTAYHRSCFNEWHPQ 128

[Close]

BLAST of Chy2G046930 vs. ExPASy TrEMBL
Match: A0A5A7UWL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003090 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.6e-52
Identity = 110/137 (80.29%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 1   MAKTRNKNAKAKKRDRARTIAKRFRVENFIRQKLLLTEKLEKASKERIEVRALHEIKFGI 60
           MAKTRNKN K KKRD+ARTIAKRFRV         L EKLE+ASKER+EVR +H+IKFGI
Sbjct: 1   MAKTRNKNTKMKKRDQARTIAKRFRV---------LKEKLEEASKERMEVRTVHQIKFGI 60

Query: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120
           SFTIPDRM TEI+DKK ISGL PLRITRVP GGPMEFHEIVKEAEKGSAPLKN +KGKPP
Sbjct: 61  SFTIPDRMTTEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHKKGKPP 120

Query: 121 NPKAAYHRSCLNEWHPQ 138
           NPK AYHRSC NEWHPQ
Sbjct: 121 NPKTAYHRSCFNEWHPQ 128

[Close]

BLAST of Chy2G046930 vs. ExPASy TrEMBL
Match: A0A2P5F4J0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_115550 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.9e-22
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQK 116
           KFGISF +PDR+A EISDKK I G HP+RITR+P GGP EFH +V+EAEK S PLK   +
Sbjct: 12  KFGISFIVPDRLAVEISDKKTIVGKHPMRITRIPLGGPTEFHRVVEEAEKESRPLKKYHE 71

Query: 117 ---GKPPNPKAAYHRSCLNEWHPQ 138
                 PNPK AYHRS +N+WHP+
Sbjct: 72  NVMATGPNPKKAYHRSHMNDWHPK 95

[Close]

BLAST of Chy2G046930 vs. ExPASy TrEMBL
Match: A0A2P5AKC8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323790 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 8.4e-22
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQK 116
           KFGISF +PDR+A EISDKK I G HP+RITR+P GGP EFH +V+EAEK S PLK   +
Sbjct: 12  KFGISFIVPDRLAVEISDKKTIVGNHPMRITRIPSGGPTEFHRVVEEAEKESRPLKKYNE 71

Query: 117 ---GKPPNPKAAYHRSCLNEWHPQ 138
                 PNPK AYHRS +N+WHP+
Sbjct: 72  NVMATRPNPKKAYHRSHMNDWHPK 95

[Close]

BLAST of Chy2G046930 vs. NCBI nr
Match: KGN63749.1 (hypothetical protein Csa_013996 [Cucumis sativus])

HSP 1 Score: 259 bits (662), Expect = 7.07e-86
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAKTRNKNAKAKKRDRARTIAKRFRVENFIRQKLLLTEKLEKASKERIEVRALHEIKFGI 60
           MAKTRNKN KAKKRDRARTIAKRFRVENF RQKL+LTEKLE+ SKER+EVRALHEIKFGI
Sbjct: 1   MAKTRNKNIKAKKRDRARTIAKRFRVENFTRQKLVLTEKLEETSKERMEVRALHEIKFGI 60

Query: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120
           SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP
Sbjct: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120

Query: 121 NPKAAYHRSCLNEWHPQ 137
           NPKAAYHRSCLNEWHPQ
Sbjct: 121 NPKAAYHRSCLNEWHPQ 137

[Close]

BLAST of Chy2G046930 vs. NCBI nr
Match: TYK28377.1 (hypothetical protein E5676_scaffold629G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (544), Expect = 3.74e-68
Identity = 111/137 (81.02%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 1   MAKTRNKNAKAKKRDRARTIAKRFRVENFIRQKLLLTEKLEKASKERIEVRALHEIKFGI 60
           MAKTRNKN K KKRD+ARTIAK+FRV         L EKLE+ASKER+EVR LH+IKFGI
Sbjct: 1   MAKTRNKNTKMKKRDQARTIAKQFRV---------LKEKLEEASKERMEVRTLHKIKFGI 60

Query: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120
           SFTIPDRMATEI+DKK ISGL PLRITRVP GGPMEFHEIVKEAEKGSAPLKN +KGKPP
Sbjct: 61  SFTIPDRMATEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHKKGKPP 120

Query: 121 NPKAAYHRSCLNEWHPQ 137
           NPK AYHRSC NEWHPQ
Sbjct: 121 NPKTAYHRSCFNEWHPQ 128

[Close]

BLAST of Chy2G046930 vs. NCBI nr
Match: KAA0058005.1 (hypothetical protein E6C27_scaffold274G003090 [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (542), Expect = 7.53e-68
Identity = 110/137 (80.29%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 1   MAKTRNKNAKAKKRDRARTIAKRFRVENFIRQKLLLTEKLEKASKERIEVRALHEIKFGI 60
           MAKTRNKN K KKRD+ARTIAKRFRV         L EKLE+ASKER+EVR +H+IKFGI
Sbjct: 1   MAKTRNKNTKMKKRDQARTIAKRFRV---------LKEKLEEASKERMEVRTVHQIKFGI 60

Query: 61  SFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKGKPP 120
           SFTIPDRM TEI+DKK ISGL PLRITRVP GGPMEFHEIVKEAEKGSAPLKN +KGKPP
Sbjct: 61  SFTIPDRMTTEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHKKGKPP 120

Query: 121 NPKAAYHRSCLNEWHPQ 137
           NPK AYHRSC NEWHPQ
Sbjct: 121 NPKTAYHRSCFNEWHPQ 128

[Close]

BLAST of Chy2G046930 vs. NCBI nr
Match: KAG6589576.1 (hypothetical protein SDJN03_14999, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189 bits (479), Expect = 3.87e-58
Identity = 105/140 (75.00%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 1   MAKTRNKNAKAKKRDRARTIAKRFRVENF-IRQKLLLTEKLEKASKERIE--VRALHEIK 60
           MAKTR K++K K R +AR IAK+F+V+N  IRQKL LTEK  K SKE +   +R     K
Sbjct: 1   MAKTRGKHSKTK-RGQARAIAKQFKVKNLSIRQKLGLTEKPAKVSKEGMGFFIRRTLPRK 60

Query: 61  FGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKG 120
           FGISFTIPDRMATEI+DKKRISGLHPLRITRVP GGPMEFH +VKEAEKGSAPLKNQQ+G
Sbjct: 61  FGISFTIPDRMATEINDKKRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQG 120

Query: 121 KPPNPKAAYHRSCLNEWHPQ 137
           +PPNPKAAYHRS LNEWHPQ
Sbjct: 121 RPPNPKAAYHRSRLNEWHPQ 139

[Close]

BLAST of Chy2G046930 vs. NCBI nr
Match: PON92695.1 (hypothetical protein TorRG33x02_115550 [Trema orientale])

HSP 1 Score: 112 bits (281), Expect = 1.16e-28
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 57  KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQK 116
           KFGISF +PDR+A EISDKK I G HP+RITR+P GGP EFH +V+EAEK S PLK   +
Sbjct: 12  KFGISFIVPDRLAVEISDKKTIVGKHPMRITRIPLGGPTEFHRVVEEAEKESRPLKKYHE 71

Query: 117 G---KPPNPKAAYHRSCLNEWHPQ 137
                 PNPK AYHRS +N+WHP+
Sbjct: 72  NVMATGPNPKKAYHRSHMNDWHPK 95

The following BLAST results are available for this feature:

BLAST of Chy2G046930 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G046930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRV9	5.6e-66	95.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014460 PE=4 SV=1	[more]
A0A5D3DX07	2.7e-52	81.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UWL1	4.6e-52	80.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A2P5F4J0	4.9e-22	63.10	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_115550 PE=4 SV...	[more]
A0A2P5AKC8	8.4e-22	63.10	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323790 PE...	[more]

BLAST of Chy2G046930 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63749.1	7.07e-86	95.62	hypothetical protein Csa_013996 [Cucumis sativus]	[more]
TYK28377.1	3.74e-68	81.02	hypothetical protein E5676_scaffold629G00030 [Cucumis melo var. makuwa]	[more]
KAA0058005.1	7.53e-68	80.29	hypothetical protein E6C27_scaffold274G003090 [Cucumis melo var. makuwa]	[more]
KAG6589576.1	3.87e-58	75.00	hypothetical protein SDJN03_14999, partial [Cucurbita argyrosperma subsp. sorori...	[more]
PON92695.1	1.16e-28	63.10	hypothetical protein TorRG33x02_115550 [Trema orientale]	[more]

BLAST of Chy2G046930 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 26..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G046930.1	Chy2G046930.1	mRNA