Chy2G046870 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G046870
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH02: 27915753 .. 27916171 (-)
RNA-Seq Expression	Chy2G046870
Synteny	Chy2G046870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTGATGCTTCTTCAGGTCCAGGTCATCAAAAAGGTAATCATAATCCATTTAAAGGGATGAAAAATCCCAATGGTGAAATGAATTTTTGCTTAGAAACAACCAGAACTGTTAGGAAGCCATTAATGGAAAAGAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCAAAGTAGGACAAAAGCCTAAAACTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAATATCTTGATGAGTAAAAGAAACTAGCTAAGCTAGTTCCTCTTCTTTCTTTTATTTTTTTTGGGTATTTCATTTATGCTTTGTTGTAGGCTGAAAAAATGAACACATGGAAAAACATGAGCTGTTTCTTTTACAAGACAATATTTTGGTACAACCAGTTTAGTATATTTCCTCTCCATATTGATAGTTTATGA

mRNA sequence

ATGGCTTCTGATGCTTCTTCAGGTCCAGGTCATCAAAAAGGTAATCATAATCCATTTAAAGGGATGAAAAATCCCAATGGTGAAATGAATTTTTGCTTAGAAACAACCAGAACTGTTAGGAAGCCATTAATGGAAAAGAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCAAAGTAGGACAAAAGCCTAAAACTTCAGTTCAAAGCAGTTCTAAGGCTGAAAAAATGAACACATGGAAAAACATGAGCTGTTTCTTTTACAAGACAATATTTTGGTACAACCAGTTTAGTATATTTCCTCTCCATATTGATAGTTTATGA

Coding sequence (CDS)

ATGGCTTCTGATGCTTCTTCAGGTCCAGGTCATCAAAAAGGTAATCATAATCCATTTAAAGGGATGAAAAATCCCAATGGTGAAATGAATTTTTGCTTAGAAACAACCAGAACTGTTAGGAAGCCATTAATGGAAAAGAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCAAAGTAGGACAAAAGCCTAAAACTTCAGTTCAAAGCAGTTCTAAGGCTGAAAAAATGAACACATGGAAAAACATGAGCTGTTTCTTTTACAAGACAATATTTTGGTACAACCAGTTTAGTATATTTCCTCTCCATATTGATAGTTTATGA

Protein sequence

MASDASSGPGHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEVKVGQKPKTSVQSSSKAEKMNTWKNMSCFFYKTIFWYNQFSIFPLHIDSL*

Homology

[Close]

BLAST of Chy2G046870 vs. ExPASy TrEMBL
Match: A0A0A0LUQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014530 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.6e-29
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1   MASDASSGPGHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEVKVG 60
           MASDASSGP HQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEV+VG
Sbjct: 64  MASDASSGPCHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEVQVG 123

Query: 61  QKPKTSVQSSSKAEK 76
           QKPKTSVQSSSK  K
Sbjct: 124 QKPKTSVQSSSKVRK 138

[Close]

BLAST of Chy2G046870 vs. ExPASy TrEMBL
Match: A0A6J1C2A7 (uncharacterized protein LOC111007289 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007289 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.8e-09
Identity = 54/90 (60.00%), Postives = 58/90 (64.44%), Query Frame = 0


Query: 1   MASDASSGPGHQKGNHNPFKG---MKNPN-------GEMNFCLETTRTVRKPLMEKKKKQ 60
           MASDASSGP HQ G  +PF G   +KNPN        E+ FC ET    +KPLME   KQ
Sbjct: 60  MASDASSGPSHQVG--HPFGGNGRVKNPNPHGLKQQSEVKFCFET--KTKKPLME---KQ 119

Query: 61  RAERKEVK-----VGQKPKTSVQSSSKAEK 76
           RAERKEVK     VGQKPKTSVQSSSK  K
Sbjct: 120 RAERKEVKEKLVLVGQKPKTSVQSSSKVRK 142

[Close]

BLAST of Chy2G046870 vs. ExPASy TrEMBL
Match: A0A6J1C092 (uncharacterized protein LOC111007289 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007289 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.8e-09
Identity = 54/90 (60.00%), Postives = 58/90 (64.44%), Query Frame = 0


Query: 1   MASDASSGPGHQKGNHNPFKG---MKNPN-------GEMNFCLETTRTVRKPLMEKKKKQ 60
           MASDASSGP HQ G  +PF G   +KNPN        E+ FC ET    +KPLME   KQ
Sbjct: 66  MASDASSGPSHQVG--HPFGGNGRVKNPNPHGLKQQSEVKFCFET--KTKKPLME---KQ 125

Query: 61  RAERKEVK-----VGQKPKTSVQSSSKAEK 76
           RAERKEVK     VGQKPKTSVQSSSK  K
Sbjct: 126 RAERKEVKEKLVLVGQKPKTSVQSSSKVRK 148

[Close]

BLAST of Chy2G046870 vs. ExPASy TrEMBL
Match: A0A6J1JBQ3 (uncharacterized protein LOC111485335 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111485335 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-07
Identity = 49/85 (57.65%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 1   MASDASSGPGHQKGNHNPFKGMKNP----------NGEMNFCLETTRTVRKPLMEKKKKQ 60
           MASDASSGP HQ+  H PF GMKNP            + N CLE T+   KP    KKKQ
Sbjct: 64  MASDASSGPSHQQRRH-PFGGMKNPPHALLPLFTHQNKPNSCLE-TKPKPKPKKPLKKKQ 123

Query: 61  RAERKEVKVGQKPKTSVQSSSKAEK 76
           RAERKEVK   +PK+SVQSSSKA K
Sbjct: 124 RAERKEVK---EPKSSVQSSSKARK 143

[Close]

BLAST of Chy2G046870 vs. ExPASy TrEMBL
Match: A0A6J1JKS2 (uncharacterized protein LOC111485335 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485335 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-07
Identity = 49/85 (57.65%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 1   MASDASSGPGHQKGNHNPFKGMKNP----------NGEMNFCLETTRTVRKPLMEKKKKQ 60
           MASDASSGP HQ+  H PF GMKNP            + N CLE T+   KP    KKKQ
Sbjct: 87  MASDASSGPSHQQRRH-PFGGMKNPPHALLPLFTHQNKPNSCLE-TKPKPKPKKPLKKKQ 146

Query: 61  RAERKEVKVGQKPKTSVQSSSKAEK 76
           RAERKEVK   +PK+SVQSSSKA K
Sbjct: 147 RAERKEVK---EPKSSVQSSSKARK 166

[Close]

BLAST of Chy2G046870 vs. NCBI nr
Match: XP_031737107.1 (uncharacterized protein LOC105434528 [Cucumis sativus] >KAE8652445.1 hypothetical protein Csa_014063 [Cucumis sativus])

HSP 1 Score: 179 bits (453), Expect = 2.71e-55
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1   MASDASSGPGHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEVKVG 60
           MASDASSGP HQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEV+VG
Sbjct: 64  MASDASSGPCHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEVQVG 123

Query: 61  QKPKTSVQSSSKAEKMNTWKNMSCFFYKTIFW 92
           QKPKTSVQSSSKAEKMNTWKNMSCFFYKTIFW
Sbjct: 124 QKPKTSVQSSSKAEKMNTWKNMSCFFYKTIFW 155

[Close]

BLAST of Chy2G046870 vs. NCBI nr
Match: XP_038879181.1 (protein SOB FIVE-LIKE 3-like [Benincasa hispida])

HSP 1 Score: 96.3 bits (238), Expect = 7.91e-23
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 1   MASDASSGPGH-QKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEVKV 60
           MASDASSGP H Q+GN   FKGMK+PNGEMNFCLET    +KPLMEKKK QRAE+KEVKV
Sbjct: 62  MASDASSGPNHHQQGNS--FKGMKSPNGEMNFCLETK--TKKPLMEKKK-QRAEKKEVKV 121

Query: 61  GQKPKTSVQSSSKAEK 75
           GQKPK+SVQSSSK  K
Sbjct: 122 GQKPKSSVQSSSKVRK 132

[Close]

BLAST of Chy2G046870 vs. NCBI nr
Match: XP_022135292.1 (uncharacterized protein LOC111007289 isoform X2 [Momordica charantia])

HSP 1 Score: 71.2 bits (173), Expect = 6.15e-13
Identity = 54/90 (60.00%), Postives = 58/90 (64.44%), Query Frame = 0


Query: 1   MASDASSGPGHQKGNHNPFKG---MKNPN-------GEMNFCLETTRTVRKPLMEKKKKQ 60
           MASDASSGP HQ G+  PF G   +KNPN        E+ FC ET    +KPLMEK   Q
Sbjct: 60  MASDASSGPSHQVGH--PFGGNGRVKNPNPHGLKQQSEVKFCFETK--TKKPLMEK---Q 119

Query: 61  RAERKEVK-----VGQKPKTSVQSSSKAEK 75
           RAERKEVK     VGQKPKTSVQSSSK  K
Sbjct: 120 RAERKEVKEKLVLVGQKPKTSVQSSSKVRK 142

[Close]

BLAST of Chy2G046870 vs. NCBI nr
Match: XP_022135291.1 (uncharacterized protein LOC111007289 isoform X1 [Momordica charantia])

HSP 1 Score: 71.2 bits (173), Expect = 7.01e-13
Identity = 54/90 (60.00%), Postives = 58/90 (64.44%), Query Frame = 0


Query: 1   MASDASSGPGHQKGNHNPFKG---MKNPN-------GEMNFCLETTRTVRKPLMEKKKKQ 60
           MASDASSGP HQ G+  PF G   +KNPN        E+ FC ET    +KPLMEK   Q
Sbjct: 66  MASDASSGPSHQVGH--PFGGNGRVKNPNPHGLKQQSEVKFCFETK--TKKPLMEK---Q 125

Query: 61  RAERKEVK-----VGQKPKTSVQSSSKAEK 75
           RAERKEVK     VGQKPKTSVQSSSK  K
Sbjct: 126 RAERKEVKEKLVLVGQKPKTSVQSSSKVRK 148

[Close]

BLAST of Chy2G046870 vs. NCBI nr
Match: XP_022987932.1 (uncharacterized protein LOC111485335 isoform X3 [Cucurbita maxima] >XP_022987933.1 uncharacterized protein LOC111485335 isoform X3 [Cucurbita maxima])

HSP 1 Score: 66.6 bits (161), Expect = 3.88e-11
Identity = 49/85 (57.65%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 1   MASDASSGPGHQKGNHNPFKGMKNP----------NGEMNFCLETTRTVRKPLMEKKKKQ 60
           MASDASSGP HQ+  H PF GMKNP            + N CLET +   KP    KKKQ
Sbjct: 64  MASDASSGPSHQQRRH-PFGGMKNPPHALLPLFTHQNKPNSCLET-KPKPKPKKPLKKKQ 123

Query: 61  RAERKEVKVGQKPKTSVQSSSKAEK 75
           RAERKEVK   +PK+SVQSSSKA K
Sbjct: 124 RAERKEVK---EPKSSVQSSSKARK 143

The following BLAST results are available for this feature:

BLAST of Chy2G046870 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G046870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUQ4	5.6e-29	94.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014530 PE=3 SV=1	[more]
A0A6J1C2A7	3.8e-09	60.00	uncharacterized protein LOC111007289 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C092	3.8e-09	60.00	uncharacterized protein LOC111007289 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1JBQ3	1.6e-07	57.65	uncharacterized protein LOC111485335 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JKS2	1.6e-07	57.65	uncharacterized protein LOC111485335 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Chy2G046870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737107.1	2.71e-55	97.83	uncharacterized protein LOC105434528 [Cucumis sativus] >KAE8652445.1 hypothetica...	[more]
XP_038879181.1	7.91e-23	77.63	protein SOB FIVE-LIKE 3-like [Benincasa hispida]	[more]
XP_022135292.1	6.15e-13	60.00	uncharacterized protein LOC111007289 isoform X2 [Momordica charantia]	[more]
XP_022135291.1	7.01e-13	60.00	uncharacterized protein LOC111007289 isoform X1 [Momordica charantia]	[more]
XP_022987932.1	3.88e-11	57.65	uncharacterized protein LOC111485335 isoform X3 [Cucurbita maxima] >XP_022987933...	[more]

BLAST of Chy2G046870 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G046870.1	Chy2G046870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0065007	biological regulation
biological_process	GO:0009987	cellular process