Chy2G044650 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGATGTTGGGCTTGCTTTGAAGATGGTGGCTGATTGTGCTCCGGCAGTTGCGACGGCTTTATATGTGGTTATGACGGCTGCACCAGTGCTGACCCCTGTTGTAGCCCCTGTTATGGTTGCAGCTACCGTTGTTACGTCGGTCACCGGCGTTTTGAAGATTTTTGAAATTTGATGATTACATTGAAATTATGTGTTGGGGAAAACTAAGGTTTTTAATGAAATTGGTTTAACTATTACATGTCTTGTTTTATGATGAATCAAAATAGTTAATTTAGTTAAAATAAGCTCAGTTCAACTATTACTTACTATCTTAATTTGAATTTCATTTCTTTAACTGATCTTGATACATTGTAGTCAAGTTTTTCATTAATCAAGGGACTTTTTATACCTATGATTAAAAGTGGAAGGATCAAAATAGTTAATTTAGTCAAAATTAACTCGGTTCAACTAGCGTTTGTATGTTCATGTAACAATAGCTTTTTAGTTCAAAATTCTCCACCACAATCCAAAACAAAAGGTTAATTTAAAACCTCCTATTAAGAAATTGGGGATCAAAGGGATACTTTTTCTTTTGAATTATTATATTTGATTTTAAGAGTGATTTTAAAATTATGAATTACTAAAAAATGGTTTTTATTTAATAATTATTTAAGTAATATAAAAATAAAAATTTGAAGAACCATATATTGTATGAAAAAAACGGAAGCGTTTGGTTGTATACTTTATTTTTTAAAATATACATAGAAAGACATCGATAAGACTTTAAATCAACGTCAATATTATTAATAGACAATGATATAATTCAAATAATATTATATGAATGTATATCATATGATATAAAATCTCTTGTTATATTTTATAAATATTTTAGACAATTTTATCATTTACAATAATTCGAATAATACGAACATTTATTTTCAATTTTGGGTTACCATGTTTTCTCTACCTAATATAATTAAAATTAAACTTCAAAAGATCATAGGAGTGCCTAATAATTGGGAACTAAAATATAAGTAAACATAAAGTACACCACTATTCATATCAAAAAGAATTTATATGATATATTTATTATTTGACACGTTATTAATTATTAAATATTGATGTTAAAGTTCTCACATAATTCTTTAAATAAGAAAATTGAGATAGACATTGAATAGACCATTTTCCTCCAAATTGAAATTAAAGTTGGGATACAAAATTGAAGAAAACAATAAAATTGAAGATTTCAGAATCCAAAGTTCATTGGATTCTTTTGGAAACGAAAATAAATCGCCGCTATTAAGTAATATATAA ATGGGGGATGTTGGGCTTGCTTTGAAGATGGTGGCTGATTGTGCTCCGGCAGTTGCGACGGCTTTATATGTGGTTATGACGGCTGCACCAGTGCTGACCCCTGTTGTAGCCCCTGTTATGGTTGCAGCTACCGTTGTTACGTCGGTCACCGGCACATTGAATAGACCATTTTCCTCCAAATTGAAATTAAAGTTGGGATACAAAATTGAAGAAAACAATAAAATTGAAGATTTCAGAATCCAAAGTTCATTGGATTCTTTTGGAAACGAAAATAAATCGCCGCTATTAAGTAATATATAA ATGGGGGATGTTGGGCTTGCTTTGAAGATGGTGGCTGATTGTGCTCCGGCAGTTGCGACGGCTTTATATGTGGTTATGACGGCTGCACCAGTGCTGACCCCTGTTGTAGCCCCTGTTATGGTTGCAGCTACCGTTGTTACGTCGGTCACCGGCACATTGAATAGACCATTTTCCTCCAAATTGAAATTAAAGTTGGGATACAAAATTGAAGAAAACAATAAAATTGAAGATTTCAGAATCCAAAGTTCATTGGATTCTTTTGGAAACGAAAATAAATCGCCGCTATTAAGTAATATATAA MGDVGLALKMVADCAPAVATALYVVMTAAPVLTPVVAPVMVAATVVTSVTGTLNRPFSSKLKLKLGYKIEENNKIEDFRIQSSLDSFGNENKSPLLSNI* Homology
BLAST of Chy2G044650 vs. ExPASy TrEMBL
Match: A0A0A0LZP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G420870 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 7.1e-10 Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of Chy2G044650 vs. ExPASy TrEMBL
Match: A0A5D3CE01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00920 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.1e-07 Identity = 41/53 (77.36%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Chy2G044650 vs. ExPASy TrEMBL
Match: A0A5D3BKI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00240 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05 Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of Chy2G044650 vs. ExPASy TrEMBL
Match: A0A5A7UMM6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00990 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.4e-05 Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of Chy2G044650 vs. ExPASy TrEMBL
Match: A0A5D3DRF6 (LPS-induced tumor necrosis factor alpha factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00340 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.4e-04 Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of Chy2G044650 vs. NCBI nr
Match: KGN65426.1 (hypothetical protein Csa_019847 [Cucumis sativus]) HSP 1 Score: 72.4 bits (176), Expect = 2.73e-14 Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of Chy2G044650 vs. NCBI nr
Match: TYK09492.1 (hypothetical protein E5676_scaffold499G00920 [Cucumis melo var. makuwa]) HSP 1 Score: 65.1 bits (157), Expect = 1.33e-11 Identity = 41/53 (77.36%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of Chy2G044650 vs. NCBI nr
Match: TYJ99647.1 (hypothetical protein E5676_scaffold562G00240 [Cucumis melo var. makuwa]) HSP 1 Score: 58.5 bits (140), Expect = 5.01e-09 Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of Chy2G044650 vs. NCBI nr
Match: KAA0054811.1 (hypothetical protein E6C27_scaffold437G00990 [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 1.42e-08 Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of Chy2G044650 vs. NCBI nr
Match: KAA0068093.1 (LPS-induced tumor necrosis factor alpha factor [Cucumis melo var. makuwa] >TYK26075.1 LPS-induced tumor necrosis factor alpha factor [Cucumis melo var. makuwa]) HSP 1 Score: 53.9 bits (128), Expect = 5.98e-06 Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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