Chy2G044390 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G044390
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	transcription factor IBH1-like 1
Location	chrH02: 25939205 .. 25940555 (+)
RNA-Seq Expression	Chy2G044390
Synteny	Chy2G044390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATATTATTGGATTTTAGTTGAAGATGCTAAAACATCAACCCATGTAAAAGTGGACTTAAGGTTAGGAGTTGACTAATTTTGAATTAATTACTAAACTTTTCAATTGCCAATGGTGTGAATTAACTAAATTCTTTTTAGTACAATAAATTAGCTAAATTCAAAAAGAAGAAAATGACATAAATCTACTTGGGGTGGATATCAAAAAAAGAACTAACATTGGATTAGTCAATATATTGTGAGTGAAGGAAGAAAAAAAAAGAAATATGCATATATTGAATTAGGAAAAGGTAATTAATTAAAGGGTTAATAAGAGAATTGAATGAGACTAATGACACCACCTCTCTTTAATTAATCACCAATCTTTTTTTTTCTTTTTTTCTTTTTCTTTTTCTTTTTTCTTCCTTTTAACTTTTTTATTTTTTTTTTGAAAATTTTGATAATATATTACCCTTTAGGGTTTGGTGGTGGGACATTAACTCCATGTGCTTGCATGTGCTGTGTCTCTCTCTAATTGGCCCACCATTGCCTTCCTTTAAGCACATAAATTGGTTTTTGCACATTCTTCTATTTCTATTTCACTTATAAACTCTCTTGGATCTTTAAATCTTCTCCTTCTCTCTCAATTTTAACACTATAACACATTTCTCAGGTATGTTCAATTTTTTGTCTCTCATTTTTTCATCAGATAATTCCCTAGTCCTTTCTTATTTTCTTTCTTATTTTTCTCTACACAACCCATTGAATTCTCTAGTTATTTATTTTTCTTATATTGTTATGATATCATCAGAATGCAGAATTCCAATTCGTTAAAACAAGAATTTTTGAAGAAATGGATTATGGGTCTTCAAATATACACAACCACAAACGAAAACATGACGGTCACAGAGCGAAAAACCGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACTGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGCCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAGGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGA

mRNA sequence

ATGAGATATTATTGGATTTTAGTTGAAGATGCTAAAACATCAACCCATGTAAAAGTGGACTTAAGAATGCAGAATTCCAATTCGTTAAAACAAGAATTTTTGAAGAAATGGATTATGGGTCTTCAAATATACACAACCACAAACGAAAACATGACGGTCACAGAGCGAAAAACCGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACTGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGCCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAGGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGA

Coding sequence (CDS)

ATGAGATATTATTGGATTTTAGTTGAAGATGCTAAAACATCAACCCATGTAAAAGTGGACTTAAGAATGCAGAATTCCAATTCGTTAAAACAAGAATTTTTGAAGAAATGGATTATGGGTCTTCAAATATACACAACCACAAACGAAAACATGACGGTCACAGAGCGAAAAACCGCCATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTAGTGGCTAACTGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGCCGTGTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAGGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCATCATCATGA

Protein sequence

MRYYWILVEDAKTSTHVKVDLRMQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS*

Homology

[Close]

BLAST of Chy2G044390 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.4e-27
Identity = 78/179 (43.58%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 23  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 82
           MQ ++S+ +EFLKKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 83  IARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 142
           I +++ ++ + LV   + G     + + + N K+ + +    KIV+RS+++ RR+ +   
Sbjct: 61  IEKTATED-NFLVRQMLSG----IKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSAS 120

Query: 143 CMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA 201
             AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Sbjct: 121 EEAAAK-AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of Chy2G044390 vs. ExPASy Swiss-Prot
Match: Q9SKX1 (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-04
Identity = 35/94 (37.23%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 112 SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGE 171
           S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG 
Sbjct: 68  SRALLRRADKDDNKIVRFSRRKWKISSKRRRSNQRAPV------VEEAAERLRNLVPGGG 127

Query: 172 FMDEISLIEETLDYMSALQAQVDVMRFLATAYNP 204
            M+   L+EET  Y+  L  QV VM+ L    +P
Sbjct: 128 GMETSKLMEETAHYIKCLSMQVKVMQCLVDGLSP 155

[Close]

BLAST of Chy2G044390 vs. ExPASy Swiss-Prot
Match: Q7XR02 (Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 8.9e-04
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 157 RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 203
           R + LR LVPGG  M+  SL+EET DY+ +L+AQV +M+ L   ++
Sbjct: 155 RAEALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQLMQGLVDLFS 200

[Close]

BLAST of Chy2G044390 vs. ExPASy TrEMBL
Match: A0A0A0LWQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G294080 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.7e-90
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 23  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 82
           MQNSNSLKQEF KKW+MGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 83  IARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 142
           IARSSVDNRSC VAN VLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 143 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 202
           CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

Query: 203 PSSSS 208
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of Chy2G044390 vs. ExPASy TrEMBL
Match: A0A1S3B8V1 (uncharacterized protein LOC103487305 OS=Cucumis melo OX=3656 GN=LOC103487305 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 179/185 (96.76%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 23  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 82
           MQN NSLKQEFLKKW+MGLQIYTTTNENMTV ERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVAERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 83  IARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 142
           IARSSVDNRSCLVAN VLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 143 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 202
           CMAAVTIARRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYN
Sbjct: 121 CMAAVTIARRLVQRRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180

Query: 203 PSSSS 208
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of Chy2G044390 vs. ExPASy TrEMBL
Match: A0A5D3BAB1 (Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00110 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.7e-74
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 51  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQ 110
           MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVAN VLGRGLCERVKQ
Sbjct: 1   MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 60

Query: 111 ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 170
           ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF
Sbjct: 61  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 120

Query: 171 MDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS 208
           MDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Sbjct: 121 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 157

[Close]

BLAST of Chy2G044390 vs. ExPASy TrEMBL
Match: A0A5A7SVT7 (Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002130 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.4e-73
Identity = 153/157 (97.45%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 51  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQ 110
           MTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVAN VLGRGLCERVKQ
Sbjct: 1   MTVAERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 60

Query: 111 ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 170
           ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQ+RTKVLRGLVPGGEF
Sbjct: 61  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQRRTKVLRGLVPGGEF 120

Query: 171 MDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS 208
           MDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Sbjct: 121 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 157

[Close]

BLAST of Chy2G044390 vs. ExPASy TrEMBL
Match: A0A6J1JMR3 (transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111485792 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.1e-60
Identity = 135/177 (76.27%), Postives = 153/177 (86.44%), Query Frame = 0


Query: 23  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 82
           M+N +SLK++FLKKW+MGLQIYTTTN NMTV +RK AIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MRNPSSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60

Query: 83  IARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 142
           IA +SV + S LVAN +LGR +CER+KQ S+ KITRSSWSSGKI+KRSRRV RR++ R  
Sbjct: 61  IAGTSVHDGSFLVANGLLGRAVCERIKQ-SSSKITRSSWSSGKILKRSRRVGRRKKCRKP 120

Query: 143 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLAT 200
             AA  IARRLVQKRT+ LRGLVPGGEFMDE+SLIEETLDY+ ALQ QVDVMR LAT
Sbjct: 121 --AAEWIARRLVQKRTRTLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLAT 174

[Close]

BLAST of Chy2G044390 vs. NCBI nr
Match: XP_004149880.1 (transcription factor IBH1-like 1 [Cucumis sativus] >KGN65277.1 hypothetical protein Csa_020046 [Cucumis sativus])

HSP 1 Score: 343 bits (881), Expect = 2.70e-118
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 23  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 82
           MQNSNSLKQEF KKW+MGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 83  IARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 142
           IARSSVDNRSC VAN VLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 143 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 202
           CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 180

Query: 203 PSSSS 207
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of Chy2G044390 vs. NCBI nr
Match: XP_008443801.1 (PREDICTED: uncharacterized protein LOC103487305 [Cucumis melo])

HSP 1 Score: 340 bits (872), Expect = 6.36e-117
Identity = 179/185 (96.76%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 23  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 82
           MQN NSLKQEFLKKW+MGLQIYTTTNENMTV ERKTAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVAERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 83  IARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 142
           IARSSVDNRSCLVAN VLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK
Sbjct: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 143 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYN 202
           CMAAVTIARRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYN
Sbjct: 121 CMAAVTIARRLVQRRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLASAYN 180

Query: 203 PSSSS 207
           PSSSS
Sbjct: 181 PSSSS 185

[Close]

BLAST of Chy2G044390 vs. NCBI nr
Match: TYJ95949.1 (transcription factor IBH1-like [Cucumis melo var. makuwa])

HSP 1 Score: 289 bits (740), Expect = 3.12e-97
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 51  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQ 110
           MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVAN VLGRGLCERVKQ
Sbjct: 1   MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 60

Query: 111 ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 170
           ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF
Sbjct: 61  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 120

Query: 171 MDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS 207
           MDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Sbjct: 121 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 157

[Close]

BLAST of Chy2G044390 vs. NCBI nr
Match: KAA0035130.1 (transcription factor IBH1-like [Cucumis melo var. makuwa])

HSP 1 Score: 286 bits (732), Expect = 5.16e-96
Identity = 153/157 (97.45%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 51  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANCVLGRGLCERVKQ 110
           MTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVAN VLGRGLCERVKQ
Sbjct: 1   MTVAERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 60

Query: 111 ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 170
           ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQ+RTKVLRGLVPGGEF
Sbjct: 61  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQRRTKVLRGLVPGGEF 120

Query: 171 MDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS 207
           MDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Sbjct: 121 MDEISLIEETLDYMSALQAQVDVMRFLASAYNPSSSS 157

[Close]

BLAST of Chy2G044390 vs. NCBI nr
Match: XP_038879866.1 (transcription factor IBH1-like 1 [Benincasa hispida])

HSP 1 Score: 276 bits (707), Expect = 9.56e-92
Identity = 156/189 (82.54%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 23  MQNSNSLKQEFLKKWIMGLQIYTTT-NENMTVTERKTAIKLSADIALASSRNCATRWSRA 82
           M+N +SLK+EFLKKW+ GLQIYTT+ NENMTV ERKTAIKLSADIALASSRNCATRWSRA
Sbjct: 1   MRNPSSLKREFLKKWMTGLQIYTTSSNENMTVIERKTAIKLSADIALASSRNCATRWSRA 60

Query: 83  VIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRN 142
           VIA SSVDNRS  VA+ VLGR +CERVKQISN K+TRSSWSSG I+KRSRRV   RRRRN
Sbjct: 61  VIASSSVDNRSRRVADGVLGRAVCERVKQISNSKMTRSSWSSGMILKRSRRV---RRRRN 120

Query: 143 KCM---AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA 202
           KCM   AA ++A+RLV KRTKVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMR LA
Sbjct: 121 KCMKAMAAESVAKRLVLKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLA 180

Query: 203 TAYNPSSSS 207
           TAYNPSSSS
Sbjct: 181 TAYNPSSSS 186

[Close]

BLAST of Chy2G044390 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-28
Identity = 78/179 (43.58%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 23  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 82
           MQ ++S+ +EFLKKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 83  IARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 142
           I +++ ++ + LV   + G     + + + N K+ + +    KIV+RS+++ RR+ +   
Sbjct: 61  IEKTATED-NFLVRQMLSG----IKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSAS 120

Query: 143 CMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA 201
             AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Sbjct: 121 EEAAAK-AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of Chy2G044390 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-28
Identity = 78/179 (43.58%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 23  MQNSNSLKQEFLKKWIMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 82
           MQ ++S+ +EFLKKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 83  IARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 142
           I +++ ++ + LV   + G     + + + N K+ + +    KIV+RS+++ RR+ +   
Sbjct: 61  IEKTATED-NFLVRQMLSG----IKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSAS 120

Query: 143 CMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA 201
             AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Sbjct: 121 EEAAAK-AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDA 173

[Close]

BLAST of Chy2G044390 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19
Identity = 73/181 (40.33%), Postives = 105/181 (58.01%), Query Frame = 0


Query: 23  MQNSNSLKQEFLKKWIMGLQIYTTTNEN-MTVTERKTAIKLSADIALASSRNCATRWSRA 82
           M   N +KQEF+KKWI  L +  ++ E+ + VTERK AI+LS+D+A+A++RN +T WSRA
Sbjct: 2   MNTYNMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRA 61

Query: 83  VIARSSVDNRSCLVANCVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRR---R 142
           +I+RS                       + +N  + R      +I+K++R   + R    
Sbjct: 62  LISRSG---------------------NKTANKPMAR------RILKKARNRMKNRCNIL 121

Query: 143 RRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEIS-LIEETLDYMSALQAQVDVMRFL 199
           RRN    A T     V+KRT +L+ LVPGGE +D+   LI ETLDY+  L+AQVDVMR +
Sbjct: 122 RRNGNFTAKT----WVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTV 151

[Close]

BLAST of Chy2G044390 vs. TAIR 10
Match: AT2G43060.1 (ILI1 binding bHLH 1 )

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05
Identity = 35/94 (37.23%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 112 SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGE 171
           S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG 
Sbjct: 68  SRALLRRADKDDNKIVRFSRRKWKISSKRRRSNQRAPV------VEEAAERLRNLVPGGG 127

Query: 172 FMDEISLIEETLDYMSALQAQVDVMRFLATAYNP 204
            M+   L+EET  Y+  L  QV VM+ L    +P
Sbjct: 128 GMETSKLMEETAHYIKCLSMQVKVMQCLVDGLSP 155

The following BLAST results are available for this feature:

BLAST of Chy2G044390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0B9	3.4e-27	43.58	Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV...	[more]
Q9SKX1	1.8e-04	37.23	Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1	[more]
Q7XR02	8.9e-04	47.83	Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 ...	[more]

BLAST of Chy2G044390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWQ3	1.7e-90	97.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G294080 PE=4 SV=1	[more]
A0A1S3B8V1	1.9e-89	96.76	uncharacterized protein LOC103487305 OS=Cucumis melo OX=3656 GN=LOC103487305 PE=...	[more]
A0A5D3BAB1	1.7e-74	98.73	Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7SVT7	1.4e-73	97.45	Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1JMR3	4.1e-60	76.27	transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111485792 PE=...	[more]

BLAST of Chy2G044390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149880.1	2.70e-118	97.84	transcription factor IBH1-like 1 [Cucumis sativus] >KGN65277.1 hypothetical prot...	[more]
XP_008443801.1	6.36e-117	96.76	PREDICTED: uncharacterized protein LOC103487305 [Cucumis melo]	[more]
TYJ95949.1	3.12e-97	98.73	transcription factor IBH1-like [Cucumis melo var. makuwa]	[more]
KAA0035130.1	5.16e-96	97.45	transcription factor IBH1-like [Cucumis melo var. makuwa]	[more]
XP_038879866.1	9.56e-92	82.54	transcription factor IBH1-like 1 [Benincasa hispida]	[more]

BLAST of Chy2G044390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30410.2	2.4e-28	43.58	sequence-specific DNA binding transcription factors	[more]
AT4G30410.1	2.4e-28	43.58	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	1.2e-19	40.33	EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arab...	[more]
AT2G43060.1	1.3e-05	37.23	ILI1 binding bHLH 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 26..200
None	No IPR available	PANTHER	PTHR33124:SF5	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 26..200
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 152..198 e-value: 1.97933E-11 score: 55.3212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G044390.1	Chy2G044390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding