Chy2G043900 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G043900
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Eukaryotic translation initiation factor 5A
Location	chrH02: 25529601 .. 25532315 (+)
RNA-Seq Expression	Chy2G043900
Synteny	Chy2G043900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGACGAGGAGCACCACTTCGACTCCAAGGCCGACGCTGGAGCTTCCAAGACTTTTCCTCAGCAGGCTGGAGCCATTCGCAAAAATGGCTACATCGTAATCAAGAACAGACCCTGCAAGGTGTCCAACTTCTTTTTTCTTTTTTTTTTTTTCTTTATTCTTTTGAATCATGAAAGTGGGTTTTTTTCTTTTTTCTCTGAAAGGGTATTCGTTTGGTTGTTTGCTAATTTTGTTGGTTCTATTTCTAATTGAACATGGTCCTTAACTTTTAACTCTGTGACTACTGATTATGGTAATTGTTACTGTTATTGATGGTTTCTCTGATTCACTTAAGTTTCCCCCTTACTTTCTCTTTGGTTGGACCTTGTGCTTTTGGGGTATTTAAAGTTTGATGTATTGAGAGAAAGATTTGTCGTTGTACACAACTATAGTGGGTGAAACTCCTTTTCTTGAAATGAAGGGATTTTTGGTTATAAGAGGAAGACTGGGACCGTTTACTTATGTATTATGTGTTATCCGCTTTCAAAGTCAAGGTTAGCGTAGTTCAACTTACACGACATTAGGTTTGAATCTCTTCACCTATGTTGAACAATTTCAGTGGGTTGAAGAGGTTGTGCAAGATCTGATTTAAGTGCAAGGCTATGAAATTTCAGGGTTAATGGTTGATTATCTATAATGGCGTTGGCAAGTAATTATTTCACCCAATTTGGATTGGTTTGTCTCAAATGTAGCTTGAGCGTGCATTTTATTTAGTAAATTTTTTGATCTGGACTTGGCCTAAGAGGTGGATGCCAGGCTAAAATGCTAATAGTGGATATATTTCTCATGCTGCATTTGTCTTTTGTGAGAGTACTAACTAGTAGGGATATATATATTGGTAATATTAGTATGGTAGTAGTAACTTGGGACATATGAGTATTAACTAGTGTTGTTTGGATATAAATGAGAGGAGTTGAGCATCTTAGAGGGGGGTGGATCATTTTGTTGAGAGTTTCCATTGTAGGACTTTGATAGAGAGAGATAACCCTATTGAAAGGCTATTGGTGTATTGCAACTTCTCTTGATATTGCAATATATTACCATCTTTGAATTTTATGTTGTAACGAAATGTCTTTGTAGCATTAGCAAAGCTTTTCTTTTCAAGAAAGAACTATGCTATTGTATGTCATCTTTTTGGTGTGATCACATGATACAATGTCCATGGTTATAGTTCCATTTTCCATGGGGGACTCAGCATTCCTTTTGTAGTCTTCTTTTTGGGCAGTGCTATAAGAACAGTTACATGCCCGAAGAAGATTAAATTTCTCCTTTGGGAACTTTTATACGAAGCTTTCGACACCAAGGATCTCCTTCAAAGACACATGCCATTCATGGAAATTTCACCCGGTTGGTGCACGTTGTGTAAACTGGATGATGAATTTCAAAGCTTCATTTTCATTCACGTTTGTTTTTTGGTATTTTTGGAGCAGAGTGCATAAAGCTTTTGGGTGGTCTCCTGTTCTTCTTATGGATGTTAAGGGTTTCCTGATCATTATCCTAGTGAGCCACCCCTTTTGGGTTCCATGGAACTCGAGAAATCAAAGAGTCTTTTTGGATAAAGAGCACCCGTTTGAAGTGTTTTTTGACCACGTTATTTATTATGCTATTTCTTGATGTAAATTGTCTAATCTATTTGCTTTGTATGGCTATTCTTCCCTTCTAATCTACTGAGAAAGCCTTTTTATAATCCTCCTGGATCTCTAATAATTTTTTTGTAAATTTCTCAGAATTTCATACATCAACAAAATCGTTTCTTGTATTAAAAAAAATAGTTCTATTTCCCATTGAAGGTTTTCTGAAATGTGCCATGCATACACAAAATAGTATGTTTTCAAGCCACTTACCAAGAAAATTATGCTGCCATATAATACCTTTTTCCCCCAACTCTTTTCCTTTCAGGTAGTTGAAGTTTCTACTTCAAAAACTGGCAAACATGGACATGCAAAGTGCCACTTTGTGGCAATTGACATATTCAATGGGAAGAAACTTGAAGATATTGTTCCTTCTTCTCACAACTGTGATGTAATTTCTTTGTCACTAACTTATTATGCTCTACTTATCGAAGTACTGATTTTTGTTCGTCTAAAAATCTTTGCATGTATTCTCTTTTGTTATTTTAATATACATGTTTCTTATCCAAAAAAACTATACCTTTGCAGGTTCCCCATGTTAATCGCACCGATTATCAGCTGATCGACATATCTGAGGATGGTTTTGTAAGTTTTAATTATATTTTTACATGATTTTGCTTTGTATACGAAAGTTTAGATCAATTTCTCTGTCTATCGCTTCAATAAATATTAGAGAAATGTAACGGAACAATACATGAAGAAAGGAGGGAGCCTTGCAGTCTTAACCTATTTATTGATTTCATTAGTTTATTTTTGCAGGTCAGTCTCCTTACTGAAAATGGAAACACCAAGGATGACCTGAGGCTTCCCACCGATGATAACCTGCTTACGCAGGTACATAAATGATAATATACCGTTACATTTACAAATCTTCAAGTCATTGCCATATAGCTCTCTGCAATGCCGTAAAATTTTTCATTCAATTTCATGTTGATAGCTTAAAGATGGGTTCGCTGAAGGCAAAGATCTCGTACTAACTGTCATGTCTGCAATGGGAGAAGAGCAGATCTGTGCTCTCAAGGACATTGGTCCTAAAAGTTAA

mRNA sequence

ATGTCGGACGAGGAGCACCACTTCGACTCCAAGGCCGACGCTGGAGCTTCCAAGACTTTTCCTCAGCAGGCTGGAGCCATTCGCAAAAATGGCTACATCGTAATCAAGAACAGACCCTGCAAGGTAGTTGAAGTTTCTACTTCAAAAACTGGCAAACATGGACATGCAAAGTGCCACTTTGTGGCAATTGACATATTCAATGGGAAGAAACTTGAAGATATTGTTCCTTCTTCTCACAACTGTGATGTAATTTCTTTGTCACTAACTTATTATGCTCTACTTATCGAAGTTCCCCATGTTAATCGCACCGATTATCAGCTGATCGACATATCTGAGGATGGTTTTGTCAGTCTCCTTACTGAAAATGGAAACACCAAGGATGACCTGAGGCTTCCCACCGATGATAACCTGCTTACGCAGCTTAAAGATGGGTTCGCTGAAGGCAAAGATCTCGTACTAACTGTCATGTCTGCAATGGGAGAAGAGCAGATCTGTGCTCTCAAGGACATTGGTCCTAAAAGTTAA

Coding sequence (CDS)

ATGTCGGACGAGGAGCACCACTTCGACTCCAAGGCCGACGCTGGAGCTTCCAAGACTTTTCCTCAGCAGGCTGGAGCCATTCGCAAAAATGGCTACATCGTAATCAAGAACAGACCCTGCAAGGTAGTTGAAGTTTCTACTTCAAAAACTGGCAAACATGGACATGCAAAGTGCCACTTTGTGGCAATTGACATATTCAATGGGAAGAAACTTGAAGATATTGTTCCTTCTTCTCACAACTGTGATGTAATTTCTTTGTCACTAACTTATTATGCTCTACTTATCGAAGTTCCCCATGTTAATCGCACCGATTATCAGCTGATCGACATATCTGAGGATGGTTTTGTCAGTCTCCTTACTGAAAATGGAAACACCAAGGATGACCTGAGGCTTCCCACCGATGATAACCTGCTTACGCAGCTTAAAGATGGGTTCGCTGAAGGCAAAGATCTCGTACTAACTGTCATGTCTGCAATGGGAGAAGAGCAGATCTGTGCTCTCAAGGACATTGGTCCTAAAAGTTAA

Protein sequence

MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS*

Homology

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BLAST of Chy2G043900 vs. ExPASy Swiss-Prot
Match: Q9AXJ4 (Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV=2)

HSP 1 Score: 302.4 bits (773), Expect = 3.4e-81
Identity = 147/174 (84.48%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHF+SKADAGASKTFPQQAG IRKNGYIVIKNRPCKV+EVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           V IDIFNGKKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 175
           E GNTKDDLRLPTD+NLL+Q+KDGFAEGKDLV++VMSAMGEE+IC+LKDIGPK+
Sbjct: 121 ETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPKN 160

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BLAST of Chy2G043900 vs. ExPASy Swiss-Prot
Match: P24922 (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 4.4e-81
Identity = 149/173 (86.13%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH F+SKADAGASKT+PQQAG IRKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIF GKKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 174
           ENGNTKDDLRLPTDDNLLTQ+KDGFAEGKDLV++VMSAMGEEQICALKDIGPK
Sbjct: 121 ENGNTKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of Chy2G043900 vs. ExPASy Swiss-Prot
Match: P69039 (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A1 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 7.6e-81
Identity = 147/173 (84.97%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHF+SKADAGASKT+PQQAG IRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIF GKKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 174
           ENGNTKDDLRLPTDDNLL  +KDGFAEGKDLVL+VMSAMGEEQIC +KD+GPK
Sbjct: 121 ENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159

[Close]

BLAST of Chy2G043900 vs. ExPASy Swiss-Prot
Match: P69040 (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum OX=4097 GN=EIF-5A1 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 7.6e-81
Identity = 147/173 (84.97%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHF+SKADAGASKT+PQQAG IRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIF GKKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 174
           ENGNTKDDLRLPTDDNLL  +KDGFAEGKDLVL+VMSAMGEEQIC +KD+GPK
Sbjct: 121 ENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159

[Close]

BLAST of Chy2G043900 vs. ExPASy Swiss-Prot
Match: P56337 (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum OX=4113 GN=EIF5A5 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.2e-80
Identity = 147/173 (84.97%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHF+SKADAGASKT+PQQAG IRK+G+IVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIF GKKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 174
           ENGNTKDDLRLPTDD LL Q+KDGFAEGKDLVL+VMSAMGEEQIC +KDIGPK
Sbjct: 121 ENGNTKDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159

[Close]

BLAST of Chy2G043900 vs. ExPASy TrEMBL
Match: A0A0A0LTB3 (Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_1G256200 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.6e-84
Identity = 159/174 (91.38%), Postives = 160/174 (91.95%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIFNGKKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 175
           ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK+
Sbjct: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN 160

[Close]

BLAST of Chy2G043900 vs. ExPASy TrEMBL
Match: A0A5A7T0H1 (Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00200 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.9e-84
Identity = 159/174 (91.38%), Postives = 159/174 (91.38%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIFNGKKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 175
           ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS
Sbjct: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 160

[Close]

BLAST of Chy2G043900 vs. ExPASy TrEMBL
Match: A0A1S3B9T8 (Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103487352 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.9e-84
Identity = 159/174 (91.38%), Postives = 159/174 (91.38%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIFNGKKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 175
           ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS
Sbjct: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 160

[Close]

BLAST of Chy2G043900 vs. ExPASy TrEMBL
Match: A0A6J1I076 (Eukaryotic translation initiation factor 5A OS=Cucurbita maxima OX=3661 GN=LOC111468243 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.9e-83
Identity = 158/173 (91.33%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIFNGKKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 174
           ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
Sbjct: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of Chy2G043900 vs. ExPASy TrEMBL
Match: A0A6J1EQX3 (Eukaryotic translation initiation factor 5A OS=Cucurbita moschata OX=3662 GN=LOC111436878 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.9e-83
Identity = 158/173 (91.33%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIFNGKKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 174
           ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
Sbjct: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of Chy2G043900 vs. NCBI nr
Match: XP_004146682.1 (eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN65160.1 hypothetical protein Csa_019565 [Cucumis sativus])

HSP 1 Score: 317 bits (813), Expect = 6.94e-109
Identity = 159/174 (91.38%), Postives = 160/174 (91.95%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIFNGKKLEDIVPSSHNCDV              PHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDV--------------PHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 174
           ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK+
Sbjct: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN 160

[Close]

BLAST of Chy2G043900 vs. NCBI nr
Match: XP_008443857.1 (PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >XP_038880020.1 eukaryotic translation initiation factor 5A-2 [Benincasa hispida] >KAA0035077.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa] >TYK03602.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa])

HSP 1 Score: 317 bits (812), Expect = 9.86e-109
Identity = 159/174 (91.38%), Postives = 159/174 (91.38%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIFNGKKLEDIVPSSHNCDV              PHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDV--------------PHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 174
           ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS
Sbjct: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 160

[Close]

BLAST of Chy2G043900 vs. NCBI nr
Match: XP_022930431.1 (eukaryotic translation initiation factor 5A-2-like [Cucurbita moschata] >XP_022969168.1 eukaryotic translation initiation factor 5A-2-like [Cucurbita maxima] >XP_023529298.1 eukaryotic translation initiation factor 5A-2-like [Cucurbita pepo subsp. pepo] >KAG6587824.1 Eukaryotic translation initiation factor 5A-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035679.1 Eukaryotic translation initiation factor 5A-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315 bits (808), Expect = 4.02e-108
Identity = 158/173 (91.33%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIFNGKKLEDIVPSSHNCDV              PHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDV--------------PHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 173
           ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK
Sbjct: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of Chy2G043900 vs. NCBI nr
Match: XP_022135162.1 (eukaryotic translation initiation factor 5A-2-like [Momordica charantia])

HSP 1 Score: 315 bits (806), Expect = 8.10e-108
Identity = 157/174 (90.23%), Postives = 159/174 (91.38%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFDSKADAGASKTFPQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIFNGKKLEDIVPSSHNCDV              PHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDV--------------PHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 174
           ENGNTKDDL+LPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK+
Sbjct: 121 ENGNTKDDLKLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN 160

[Close]

BLAST of Chy2G043900 vs. NCBI nr
Match: PSS08119.1 (Eukaryotic translation initiation factor 5A-2 [Actinidia chinensis var. chinensis])

HSP 1 Score: 309 bits (792), Expect = 1.10e-105
Identity = 153/174 (87.93%), Postives = 158/174 (90.80%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHF+SKADAGASKT+PQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIFNGKKLEDIVPSSHNCDV              PHVNRTDYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDV--------------PHVNRTDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKS 174
           ENGNTKDDLRLPTDDNLLTQ+KDGF EGKDLV++VMSAMGEEQICALKDIGPKS
Sbjct: 121 ENGNTKDDLRLPTDDNLLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPKS 160

[Close]

BLAST of Chy2G043900 vs. TAIR 10
Match: AT1G13950.1 (eukaryotic elongation factor 5A-1 )

HSP 1 Score: 276.9 bits (707), Expect = 1.1e-74
Identity = 138/173 (79.77%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHF+S +DAGASKT+PQQAG IRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIF  KKLEDIVPSSHNCD              VPHVNRTDYQLIDISEDG+VSLLT
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCD--------------VPHVNRTDYQLIDISEDGYVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 174
           +NG+TKDDL+LP DD LL Q+K GF +GKDLV++VMSAMGEEQI ALKDIGPK
Sbjct: 121 DNGSTKDDLKLPNDDTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158

[Close]

BLAST of Chy2G043900 vs. TAIR 10
Match: AT1G69410.1 (eukaryotic elongation factor 5A-3 )

HSP 1 Score: 273.1 bits (697), Expect = 1.6e-73
Identity = 134/173 (77.46%), Postives = 150/173 (86.71%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHF+S +DAGASKT+PQQAG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIF  KKLEDIVPSSHNCD              VPHVNR DYQLIDISEDGFVSLLT
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCD--------------VPHVNRVDYQLIDISEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPK 174
           +NG+TKDDL+LPTD+ LLTQLK+GF EGKD+V++VMSAMGEEQ+CALK++GPK
Sbjct: 121 DNGSTKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158

[Close]

BLAST of Chy2G043900 vs. TAIR 10
Match: AT1G26630.1 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 254.2 bits (648), Expect = 7.5e-68
Identity = 123/171 (71.93%), Postives = 144/171 (84.21%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHF++ +++GASKT+PQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIF  KKLEDIVPSSHNCD              VPHVNR DYQLIDI+EDGFVSLLT
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCD--------------VPHVNRVDYQLIDITEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIG 172
           ++G TKDDL+LPTDD L  Q++ GF EGKD+V++VMS+MGEEQICA+K++G
Sbjct: 121 DSGGTKDDLKLPTDDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156

[Close]

BLAST of Chy2G043900 vs. TAIR 10
Match: AT1G26630.2 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 210.7 bits (535), Expect = 9.5e-55
Identity = 104/141 (73.76%), Postives = 116/141 (82.27%), Query Frame = 0


Query: 1   MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHF++ +++GASKT+PQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFNGKKLEDIVPSSHNCDVISLSLTYYALLIEVPHVNRTDYQLIDISEDGFVSLLT 120
           VAIDIF  KKLEDIVPSSHNCD              VPHVNR DYQLIDI+EDGFVSLLT
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCD--------------VPHVNRVDYQLIDITEDGFVSLLT 120

Query: 121 ENGNTKDDLRLPTDDNLLTQL 142
           ++G TKDDL+LPTDD L  QL
Sbjct: 121 DSGGTKDDLKLPTDDGLTAQL 126

The following BLAST results are available for this feature:

BLAST of Chy2G043900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AXJ4	3.4e-81	84.48	Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV...	[more]
P24922	4.4e-81	86.13	Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=40...	[more]
P69039	7.6e-81	84.97	Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia OX=40...	[more]
P69040	7.6e-81	84.97	Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum OX=4097 GN=EI...	[more]
P56337	2.2e-80	84.97	Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum OX=4113 GN=EI...	[more]

BLAST of Chy2G043900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTB3	7.6e-84	91.38	Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]
A0A5A7T0H1	9.9e-84	91.38	Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B9T8	9.9e-84	91.38	Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103487...	[more]
A0A6J1I076	2.9e-83	91.33	Eukaryotic translation initiation factor 5A OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EQX3	2.9e-83	91.33	Eukaryotic translation initiation factor 5A OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Chy2G043900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146682.1	6.94e-109	91.38	eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN65160.1 hypo...	[more]
XP_008443857.1	9.86e-109	91.38	PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >XP_0388...	[more]
XP_022930431.1	4.02e-108	91.33	eukaryotic translation initiation factor 5A-2-like [Cucurbita moschata] >XP_0229...	[more]
XP_022135162.1	8.10e-108	90.23	eukaryotic translation initiation factor 5A-2-like [Momordica charantia]	[more]
PSS08119.1	1.10e-105	87.93	Eukaryotic translation initiation factor 5A-2 [Actinidia chinensis var. chinensi...	[more]

BLAST of Chy2G043900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13950.1	1.1e-74	79.77	eukaryotic elongation factor 5A-1	[more]
AT1G69410.1	1.6e-73	77.46	eukaryotic elongation factor 5A-3	[more]
AT1G26630.1	7.5e-68	71.93	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]
AT1G26630.2	9.5e-55	73.76	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020189	Translation elongation factor, IF5A C-terminal	SMART	SM01376	eIF_5a_2	coord: 99..168 e-value: 1.6E-33 score: 127.3
IPR020189	Translation elongation factor, IF5A C-terminal	PFAM	PF01287	eIF-5a	coord: 99..168 e-value: 3.3E-28 score: 97.6
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 1..84 e-value: 1.4E-41 score: 142.2
IPR001884	Translation elongation factor IF5A-like	TIGRFAM	TIGR00037	TIGR00037	coord: 18..167 e-value: 2.7E-35 score: 119.0
IPR001884	Translation elongation factor IF5A-like	PIRSF	PIRSF003025	Transl_init_eIF5A	coord: 1..171 e-value: 2.7E-60 score: 200.3
IPR001884	Translation elongation factor IF5A-like	PANTHER	PTHR11673	TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER	coord: 1..170
None	No IPR available	GENE3D	2.40.50.140		coord: 100..173 e-value: 7.4E-34 score: 117.7
None	No IPR available	PANTHER	PTHR11673:SF42	BNAA07G09420D PROTEIN	coord: 1..170
None	No IPR available	CDD	cd04468	S1_eIF5A	coord: 100..170 e-value: 1.2743E-30 score: 104.156
IPR019769	Translation elongation factor, IF5A, hypusine site	PROSITE	PS00302	IF5A_HYPUSINE	coord: 50..57
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 15..85
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 100..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G043900.1	Chy2G043900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0045905	positive regulation of translational termination
biological_process	GO:0006413	translational initiation
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003723	RNA binding