Chy2G043430 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G043430
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Exu regulon transcriptional regulator
Location	chrH02: 25120569 .. 25122359 (+)
RNA-Seq Expression	Chy2G043430
Synteny	Chy2G043430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTCAAGGTATGCACAACTTTTTGCCATTTCTGTTAGATGGGTTTTGTTTATTTTGCTTTTGCAGTTTTATTATGCATTAATGGAATTATAATGATCGTGAGTTGTTTTTTCTATATTGTGAAAGGTATTCGCTTGGGAAATGGGATCATCATCAAGCATGTTGGGCAACTAGAAAAAACCCTAGTGAGTTTTCTTCCAATCCTATCTTTTTATTATATGTTCTACTTGGATTTCTTTTTTTTTTTTATAGAATTATTTGAATTCATTTTCCAATTCTAAATAAAAAAATCTATATTTTTTAATTTTAAAAATTTGGACGAACTTTTCTAGTAGTAAGTAACCAAACGAAGAAATCTATAAATATAACCCATATTTATAAGCTTAATTAAAAAAAAAAAAAAGTTTATAACTCAACATTTTTTGTGGTTTTCATTTTATTATTATTTGTTTATTTGGTCAAAATCTTTAATATTGATATGGCTGCTACATTGATATTGCAGGAAGAAGAAGTAGAAGGTTTTAGGAAAACTACTATTTGTGAGAATGGGCATTGCAATTCAGGTATGCTATTTAGTGAAATAGTGCAATTTAAATCTTTTCCTTGATGACTTTTTCTTTTCTTTTCAAAAAGTCAACTTATAAATTATAATATCTATTTTTCTTTTATGTTTTTATACTTAAAGCCCAAAATTTGCCAACTGAAAAAGTAGTTCTTCCAAAATAAAAAATAAAAAGGAATTTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAGAGGAAATTTTGGACTTAAAAGGTGAAAAATATCTATATCAAACAGAGTTATATATAATTTTTTATACATTAAATTGTGCTCCAAAAATGTTGATAAAACATCATTAAAAAAGCAACCCAAATGGGACATACTATTTCATAAATTTATTATTGTGTGTATATATATAATTATATATATCCATATCTGAAGTGTGGGTTTGACATTATTTGATATTTATGATATATTTTGCAGGAAACAATAGAAAACTTATGACTGTGACTTCACCACCAATACCATCATCTCCAACTCCTTCTATAAGGGTTAGTCATCCATCACTTCAATCTTATTTATTTTTAAAAACATTCATGAGTGAGCATTTACTAAAATTAATTCTTTTTTAACAATTTTAAAAATTCTTATTTGTTTTTTGTCACTATTTTATCACCCTTCCCACCTCAACATTTGAATAATGCATATAGCTAAATTATATTTCTATTTAGACTCAGTTTACGAGTTTATTTCCTCTTAGTAGTTTTTCATCTATATAAAACTTTGAAATTTTTGCCAATTTTTCAAAACAAAAAATTATTTTTTTTTAGTTTTCAAAATTAGGTTTAATTTTTTCTGTCACATTTAAACTAAAAAACAATAATCAAATAGTGTAAGAAGATCTTTTTAAGGGAGTAGTTTTTATAAACTTTAAAAAGTTCAAATATTTCTATTAGATTTCCTGTGTCTCCAATAGTATCTATATATATATTGATCAATTACTATAAGCCCTTGAAAGTTTAATCAACATTGAATTAATTAATTAATGGTTTATTGTGTTCTTGGTACAGAATAATGAAGAAGGAAACTGCAAAAAGGGGAGCCCCAAGTCATCAAATAAAGAAGAATCATCAAGTGTGAAAAAGAAGGATAATTTGGAGAATTCAGAGGCAGTTTCTAAAAATCTTGAGGCAGCCCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAA

mRNA sequence

ATGAAGCTCAAGGAAGAAGAAGTAGAAGGTTTTAGGAAAACTACTATTTGTGAGAATGGGCATTGCAATTCAGGAAACAATAGAAAACTTATGACTGTGACTTCACCACCAATACCATCATCTCCAACTCCTTCTATAAGGAATAATGAAGAAGGAAACTGCAAAAAGGGGAGCCCCAAGTCATCAAATAAAGAAGAATCATCAAGTGTGAAAAAGAAGGATAATTTGGAGAATTCAGAGGCAGTTTCTAAAAATCTTGAGGCAGCCCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAA

Coding sequence (CDS)

ATGAAGCTCAAGGAAGAAGAAGTAGAAGGTTTTAGGAAAACTACTATTTGTGAGAATGGGCATTGCAATTCAGGAAACAATAGAAAACTTATGACTGTGACTTCACCACCAATACCATCATCTCCAACTCCTTCTATAAGGAATAATGAAGAAGGAAACTGCAAAAAGGGGAGCCCCAAGTCATCAAATAAAGAAGAATCATCAAGTGTGAAAAAGAAGGATAATTTGGAGAATTCAGAGGCAGTTTCTAAAAATCTTGAGGCAGCCCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAA

Protein sequence

MKLKEEEVEGFRKTTICENGHCNSGNNRKLMTVTSPPIPSSPTPSIRNNEEGNCKKGSPKSSNKEESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN*

Homology

[Close]

BLAST of Chy2G043430 vs. ExPASy TrEMBL
Match: A0A5A7U792 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00250 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 101/109 (92.66%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 3   LKEEEVEGFRKTTICENGHCNSGNNRKLMTVTSPPIPSSPTPSIRNNEEGNCKKGSPKSS 62
           L+EE VEGFRKTTICENGHCNSGNNRKLMTVT+PPIPSSPTPS RNNEE N KKG+PKSS
Sbjct: 45  LEEEVVEGFRKTTICENGHCNSGNNRKLMTVTTPPIPSSPTPSTRNNEEENYKKGNPKSS 104

Query: 63  NKEESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 112
           NKEESSSVKKKD+LENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN
Sbjct: 105 NKEESSSVKKKDDLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 153

[Close]

BLAST of Chy2G043430 vs. ExPASy TrEMBL
Match: A0A0A0LYZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264570 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.9e-44
Identity = 100/107 (93.46%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 6   EEVEGFRKTTICENGHCNSGNNRKLMTVTSPPIPSSPTPSIRNNEEGNCKKG-SPKSSNK 65
           EEVEG ++TTICENGHCNSGNNRKLMTVT+PPIPSSPTPSIRNN EGN KKG SPKSSNK
Sbjct: 48  EEVEGLKETTICENGHCNSGNNRKLMTVTAPPIPSSPTPSIRNN-EGNYKKGISPKSSNK 107

Query: 66  EESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 112
           EESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN
Sbjct: 108 EESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 153

[Close]

BLAST of Chy2G043430 vs. ExPASy TrEMBL
Match: A0A6J1C2B2 (uncharacterized protein LOC111007293 OS=Momordica charantia OX=3673 GN=LOC111007293 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.2e-21
Identity = 74/110 (67.27%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 9   EGFRKT-TICENGHCNSGNNRKLMTVTSPPIPSSPTPSI-RNNEEG-NCKKGSPKSSNKE 68
           EGF K  T+C  G CNSGN RKL+T TS   PSS TPSI RNNEEG N K+GSP S  K+
Sbjct: 89  EGFGKIFTLCRKGQCNSGNIRKLLTATS---PSSSTPSITRNNEEGENFKRGSPIS--KK 148

Query: 69  ESSSVKKKDNLENSEAVSKNLEAAL----DLIDIAEMDYSPAKRKPPIHN 112
           E  SVK K  L+NSEAVS+NLEA      DL+DIAEMDYSPAKRKPPIHN
Sbjct: 149 EELSVKDKKELDNSEAVSENLEAGQEHYPDLVDIAEMDYSPAKRKPPIHN 193

[Close]

BLAST of Chy2G043430 vs. ExPASy TrEMBL
Match: A0A6J1C2H1 (uncharacterized protein LOC111007333 OS=Momordica charantia OX=3673 GN=LOC111007333 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.2e-21
Identity = 74/110 (67.27%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 9   EGFRKT-TICENGHCNSGNNRKLMTVTSPPIPSSPTPSI-RNNEEG-NCKKGSPKSSNKE 68
           EGF K  T+C  G CNSGN RKL+T TS   PSS TPSI RNNEEG N K+GSP S  K+
Sbjct: 50  EGFGKIFTLCRKGQCNSGNIRKLLTATS---PSSSTPSITRNNEEGENFKRGSPIS--KK 109

Query: 69  ESSSVKKKDNLENSEAVSKNLEAAL----DLIDIAEMDYSPAKRKPPIHN 112
           E  SVK K  L+NSEAVS+NLEA      DL+DIAEMDYSPAKRKPPIHN
Sbjct: 110 EELSVKDKKELDNSEAVSENLEAGQEHYPDLVDIAEMDYSPAKRKPPIHN 154

[Close]

BLAST of Chy2G043430 vs. ExPASy TrEMBL
Match: A0A6J1E3V7 (uncharacterized protein LOC111025844 OS=Momordica charantia OX=3673 GN=LOC111025844 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.3e-16
Identity = 66/110 (60.00%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 9   EGFRKT-TICENGHCNSGNNRKLMTVTSPPIPSSPTPSI-RNNEE-GNCKKGSPKSSNKE 68
           EGF K  T+C  G CNSGN RKL+T TS   PSS TPSI RNN+E GN ++ +P S  K+
Sbjct: 50  EGFGKIFTLCRKGQCNSGNIRKLLTATS---PSSSTPSITRNNDEGGNFRRANPIS--KK 109

Query: 69  ESSSVKKKDNLENSEAVSKNLEAAL----DLIDIAEMDYSPAKRKPPIHN 112
           E  SVK K  L+NSEAVS+NLEA      DL DIAEMDYS A+ KPPIH+
Sbjct: 110 EELSVKDKKELDNSEAVSENLEAGQEHNPDLGDIAEMDYSLARGKPPIHH 154

[Close]

BLAST of Chy2G043430 vs. NCBI nr
Match: KAA0050046.1 (uncharacterized protein E6C27_scaffold675G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 196 bits (499), Expect = 3.08e-62
Identity = 101/109 (92.66%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 3   LKEEEVEGFRKTTICENGHCNSGNNRKLMTVTSPPIPSSPTPSIRNNEEGNCKKGSPKSS 62
           L+EE VEGFRKTTICENGHCNSGNNRKLMTVT+PPIPSSPTPS RNNEE N KKG+PKSS
Sbjct: 45  LEEEVVEGFRKTTICENGHCNSGNNRKLMTVTTPPIPSSPTPSTRNNEEENYKKGNPKSS 104

Query: 63  NKEESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 111
           NKEESSSVKKKD+LENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN
Sbjct: 105 NKEESSSVKKKDDLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 153

[Close]

BLAST of Chy2G043430 vs. NCBI nr
Match: XP_004146738.1 (uncharacterized protein LOC101204556 [Cucumis sativus] >KGN65206.1 hypothetical protein Csa_019538 [Cucumis sativus])

HSP 1 Score: 187 bits (474), Expect = 1.98e-58
Identity = 100/107 (93.46%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 6   EEVEGFRKTTICENGHCNSGNNRKLMTVTSPPIPSSPTPSIRNNEEGNCKKG-SPKSSNK 65
           EEVEG ++TTICENGHCNSGNNRKLMTVT+PPIPSSPTPSIRNNE GN KKG SPKSSNK
Sbjct: 48  EEVEGLKETTICENGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNE-GNYKKGISPKSSNK 107

Query: 66  EESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 111
           EESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN
Sbjct: 108 EESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 153

[Close]

BLAST of Chy2G043430 vs. NCBI nr
Match: XP_038876887.1 (uncharacterized protein LOC120069249 [Benincasa hispida])

HSP 1 Score: 160 bits (404), Expect = 9.52e-48
Identity = 91/114 (79.82%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 2   KLKEEE----VEGFRKTTICENGHCNSGNNRKLMTVTSPPIPSSPTPSIRNNEEGNCKKG 61
           K  EEE    VEGFRK T+CENGHCNSGNNRKL+T TSP IPSSPTPS RNNE GN KKG
Sbjct: 45  KTLEEESRLIVEGFRKITLCENGHCNSGNNRKLLTATSP-IPSSPTPSTRNNE-GN-KKG 104

Query: 62  SPKSSNKEESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 111
           +P SS+ +E  SVK+KDNLENSEAVSKNLEA LDLIDIAEMDYSPAKRKPPIHN
Sbjct: 105 NPMSSSHKEDPSVKRKDNLENSEAVSKNLEANLDLIDIAEMDYSPAKRKPPIHN 155

[Close]

BLAST of Chy2G043430 vs. NCBI nr
Match: XP_022135362.1 (uncharacterized protein LOC111007333 [Momordica charantia])

HSP 1 Score: 112 bits (281), Expect = 4.37e-29
Identity = 74/110 (67.27%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 9   EGFRKT-TICENGHCNSGNNRKLMTVTSPPIPSSPTPSI-RNNEEG-NCKKGSPKSSNKE 68
           EGF K  T+C  G CNSGN RKL+T TSP   SS TPSI RNNEEG N K+GSP S  K+
Sbjct: 50  EGFGKIFTLCRKGQCNSGNIRKLLTATSP---SSSTPSITRNNEEGENFKRGSPIS--KK 109

Query: 69  ESSSVKKKDNLENSEAVSKNLEAAL----DLIDIAEMDYSPAKRKPPIHN 111
           E  SVK K  L+NSEAVS+NLEA      DL+DIAEMDYSPAKRKPPIHN
Sbjct: 110 EELSVKDKKELDNSEAVSENLEAGQEHYPDLVDIAEMDYSPAKRKPPIHN 154

[Close]

BLAST of Chy2G043430 vs. NCBI nr
Match: XP_022135297.1 (uncharacterized protein LOC111007293 [Momordica charantia])

HSP 1 Score: 112 bits (281), Expect = 1.26e-28
Identity = 74/110 (67.27%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 9   EGFRKT-TICENGHCNSGNNRKLMTVTSPPIPSSPTPSI-RNNEEG-NCKKGSPKSSNKE 68
           EGF K  T+C  G CNSGN RKL+T TSP   SS TPSI RNNEEG N K+GSP S  K+
Sbjct: 89  EGFGKIFTLCRKGQCNSGNIRKLLTATSP---SSSTPSITRNNEEGENFKRGSPIS--KK 148

Query: 69  ESSSVKKKDNLENSEAVSKNLEAAL----DLIDIAEMDYSPAKRKPPIHN 111
           E  SVK K  L+NSEAVS+NLEA      DL+DIAEMDYSPAKRKPPIHN
Sbjct: 149 EELSVKDKKELDNSEAVSENLEAGQEHYPDLVDIAEMDYSPAKRKPPIHN 193

The following BLAST results are available for this feature:

BLAST of Chy2G043430 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G043430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U792	1.1e-46	92.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LYZ1	4.9e-44	93.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264570 PE=4 SV=1	[more]
A0A6J1C2B2	1.2e-21	67.27	uncharacterized protein LOC111007293 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1C2H1	1.2e-21	67.27	uncharacterized protein LOC111007333 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1E3V7	3.3e-16	60.00	uncharacterized protein LOC111025844 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Chy2G043430 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050046.1	3.08e-62	92.66	uncharacterized protein E6C27_scaffold675G00250 [Cucumis melo var. makuwa]	[more]
XP_004146738.1	1.98e-58	93.46	uncharacterized protein LOC101204556 [Cucumis sativus] >KGN65206.1 hypothetical ...	[more]
XP_038876887.1	9.52e-48	79.82	uncharacterized protein LOC120069249 [Benincasa hispida]	[more]
XP_022135362.1	4.37e-29	67.27	uncharacterized protein LOC111007333 [Momordica charantia]	[more]
XP_022135297.1	1.26e-28	67.27	uncharacterized protein LOC111007293 [Momordica charantia]	[more]

BLAST of Chy2G043430 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..80
None	No IPR available	PANTHER	PTHR33743:SF19	SUBFAMILY NOT NAMED	coord: 9..111
IPR039337	Protein GOLVEN 2	PANTHER	PTHR33743	FAMILY NOT NAMED	coord: 9..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G043430.1	Chy2G043430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0008083	growth factor activity