Chy2G043310 (gene) Cucumber (hystrix) v1

Overview
NameChy2G043310
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 24911545 .. 24911760 (-)
RNA-Seq ExpressionChy2G043310
SyntenyChy2G043310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCATCCAACAACAGTAGCAGCAGCAACACCCCCATCGTCGGAGGATTTCTCTTTGTTCCCTTGCATATCATTCGTTCCTAAGGCAACAATATGTGTGATTGATGTGCTTAAAAATGCAGTTTCTCTTCATCCTTCAAGTTGTGAAGCCATCTCTAAACTTCATGATTGTTCGTCCCAATTTCTCACAGACATTCCCTCCGGCGATATGATTTTG

mRNA sequence

CATCATCCAACAACAGTAGCAGCAGCAACACCCCCATCGTCGGAGGATTTCTCTTTGTTCCCTTGCATATCATTCGTTCCTAAGGCAACAATATGTGTGATTGATGTGCTTAAAAATGCAGTTTCTCTTCATCCTTCAAGTTGTGAAGCCATCTCTAAACTTCATGATTGTTCGTCCCAATTTCTCACAGACATTCCCTCCGGCGATATGATTTTG

Coding sequence (CDS)

CATCATCCAACAACAGTAGCAGCAGCAACACCCCCATCGTCGGAGGATTTCTCTTTGTTCCCTTGCATATCATTCGTTCCTAAGGCAACAATATGTGTGATTGATGTGCTTAAAAATGCAGTTTCTCTTCATCCTTCAAGTTGTGAAGCCATCTCTAAACTTCATGATTGTTCGTCCCAATTTCTCACAGACATTCCCTCCGGCGATATGATTTTG

Protein sequence

HHPTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFLTDIPSGDMIL
Homology
BLAST of Chy2G043310 vs. ExPASy TrEMBL
Match: A0A5D3CFS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00210 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.1e-23
Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 0

Query: 3  PTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFL 62
          PT VAAAT P+SEDFSLFPCISFVPKAT CVIDVLKNAV+ HPS CEAIS+LHDCSSQFL
Sbjct: 28 PTIVAAAT-PTSEDFSLFPCISFVPKATKCVIDVLKNAVAPHPSCCEAISQLHDCSSQFL 87

Query: 63 TDIPSGDMIL 73
           DIPS DMIL
Sbjct: 88 KDIPSSDMIL 96

BLAST of Chy2G043310 vs. ExPASy TrEMBL
Match: A0A5A7U9B0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00630 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.0e-23
Identity = 59/70 (84.29%), Postives = 63/70 (90.00%), Query Frame = 0

Query: 3  PTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFL 62
          PT VAAAT P+SEDFSLFPCISFVPKAT CVIDVLKN V+ HPS CEAI++LHDCSSQFL
Sbjct: 28 PTIVAAAT-PTSEDFSLFPCISFVPKATKCVIDVLKNVVAPHPSCCEAITQLHDCSSQFL 87

Query: 63 TDIPSGDMIL 73
           DIPSGDMIL
Sbjct: 88 KDIPSGDMIL 96

BLAST of Chy2G043310 vs. ExPASy TrEMBL
Match: A0A5A7U2D8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00440 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.2e-20
Identity = 57/70 (81.43%), Postives = 60/70 (85.71%), Query Frame = 0

Query: 3  PTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFL 62
          PT VAAAT P S+DFSLFPCISFVP AT  VIDVLKNAV+ HPS CEAIS+LHDCSSQFL
Sbjct: 28 PTIVAAAT-PISKDFSLFPCISFVPMATKRVIDVLKNAVAPHPSCCEAISQLHDCSSQFL 87

Query: 63 TDIPSGDMIL 73
           DIPS DMIL
Sbjct: 88 KDIPSDDMIL 96

BLAST of Chy2G043310 vs. ExPASy TrEMBL
Match: A0A5A7U8Y3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00460 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.0e-19
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0

Query: 3  PTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFL 62
          P TVAAA P    D SLFPC SFVPKAT CVIDVLKNAV+ HPS C+AIS+LHDCSSQFL
Sbjct: 27 PVTVAAAAPEG--DISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISELHDCSSQFL 86

Query: 63 TDIPSGDMIL 73
           DIPS DMIL
Sbjct: 87 KDIPSVDMIL 94

BLAST of Chy2G043310 vs. ExPASy TrEMBL
Match: A0A5D3CEQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00180 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-18
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0

Query: 3  PTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFL 62
          P TVAAA P    D SLFPC SFVPKAT CVIDVLKNAV+ HPS C+AIS+LHDCSSQFL
Sbjct: 27 PVTVAAAAPIG--DISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISELHDCSSQFL 86

Query: 63 TDIPSGDMIL 73
           DIPS DMIL
Sbjct: 87 KDIPSVDMIL 94

BLAST of Chy2G043310 vs. NCBI nr
Match: TYK10345.1 (hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 118 bits (295), Expect = 1.80e-32
Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 0

Query: 3  PTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFL 62
          PT VAAATP +SEDFSLFPCISFVPKAT CVIDVLKNAV+ HPS CEAIS+LHDCSSQFL
Sbjct: 28 PTIVAAATP-TSEDFSLFPCISFVPKATKCVIDVLKNAVAPHPSCCEAISQLHDCSSQFL 87

Query: 63 TDIPSGDMIL 72
           DIPS DMIL
Sbjct: 88 KDIPSSDMIL 96

BLAST of Chy2G043310 vs. NCBI nr
Match: KAA0050079.1 (hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (294), Expect = 2.55e-32
Identity = 59/70 (84.29%), Postives = 63/70 (90.00%), Query Frame = 0

Query: 3  PTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFL 62
          PT VAAATP +SEDFSLFPCISFVPKAT CVIDVLKN V+ HPS CEAI++LHDCSSQFL
Sbjct: 28 PTIVAAATP-TSEDFSLFPCISFVPKATKCVIDVLKNVVAPHPSCCEAITQLHDCSSQFL 87

Query: 63 TDIPSGDMIL 72
           DIPSGDMIL
Sbjct: 88 KDIPSGDMIL 96

BLAST of Chy2G043310 vs. NCBI nr
Match: KAA0050063.1 (hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (269), Expect = 1.64e-28
Identity = 57/70 (81.43%), Postives = 60/70 (85.71%), Query Frame = 0

Query: 3  PTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFL 62
          PT VAAATP  S+DFSLFPCISFVP AT  VIDVLKNAV+ HPS CEAIS+LHDCSSQFL
Sbjct: 28 PTIVAAATP-ISKDFSLFPCISFVPMATKRVIDVLKNAVAPHPSCCEAISQLHDCSSQFL 87

Query: 63 TDIPSGDMIL 72
           DIPS DMIL
Sbjct: 88 KDIPSDDMIL 96

BLAST of Chy2G043310 vs. NCBI nr
Match: KAA0050065.1 (hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 104 bits (259), Expect = 5.15e-27
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0

Query: 3  PTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFL 62
          P TVAAA P    D SLFPC SFVPKAT CVIDVLKNAV+ HPS C+AIS+LHDCSSQFL
Sbjct: 27 PVTVAAAAP--EGDISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISELHDCSSQFL 86

Query: 63 TDIPSGDMIL 72
           DIPS DMIL
Sbjct: 87 KDIPSVDMIL 94

BLAST of Chy2G043310 vs. NCBI nr
Match: TYK10343.1 (hypothetical protein E5676_scaffold367G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (257), Expect = 1.04e-26
Identity = 54/70 (77.14%), Postives = 57/70 (81.43%), Query Frame = 0

Query: 3  PTTVAAATPPSSEDFSLFPCISFVPKATICVIDVLKNAVSLHPSSCEAISKLHDCSSQFL 62
          P TVAAA P    D SLFPC SFVPKAT CVIDVLKNAV+ HPS C+AIS+LHDCSSQFL
Sbjct: 27 PVTVAAAAP--IGDISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISELHDCSSQFL 86

Query: 63 TDIPSGDMIL 72
           DIPS DMIL
Sbjct: 87 KDIPSVDMIL 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CFS63.1e-2385.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U9B04.0e-2384.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U2D83.2e-2081.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U8Y36.0e-1977.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CEQ41.0e-1877.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK10345.11.80e-3285.71hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa][more]
KAA0050079.12.55e-3284.29hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa][more]
KAA0050063.11.64e-2881.43hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa][more]
KAA0050065.15.15e-2777.14hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa][more]
TYK10343.11.04e-2677.14hypothetical protein E5676_scaffold367G00180 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G043310.1Chy2G043310.1mRNA