Chy2G042840 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G042840
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Methyl-CpG-binding domain-containing protein 11-like
Location	chrH02: 24126650 .. 24128302 (+)
RNA-Seq Expression	Chy2G042840
Synteny	Chy2G042840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGCACACTGGAAAAACAGGGGTCTAAAGAGGATATTCTGTTCCTGGAATTGCCTGCTCCTCTTGGTTGGAACAAAAAGGTTTCCTCCTTTTTCTTCTTTTTATCTTACATTTTTGTCTCTCCTTTGAACTTCCCTTTGCTCATTTGTTGTGCTGTGAATTTTCTGATACTTCTGTAGTTCTGTTCTGTGTTAGACTTTCAAGCTTGAATGTGTTTGTATGGAGGTTAGGGCTGATGGGTATCTTTGGAGTTAAGCAGAATGCTATAACACTTATGCTGTGGGGCTTAGGGATTTGTTTTTTTTTTCTTTTTCTTTATAGACTCTATCGAATCTATTTTTTTGTTTAGTACTCATTAGCCAGTTATCTTTTTTGGGTTTGTTGGAAAAAGTTGGTGTTGGTTCTGTCTCTTTTTCTTTATCATCTTTCTTTTTCTGGTTGGAATGTCGAATGATCAAACACGAAGTCTCCTTGCTCGGTTAGCAAGTTGGGGTCCCGGATGATGCACTCTAATAGGGTTGGGGCATGACGCTTTTAGGCCGAAATTGTATTTATGTTATTTACATTATGATTTTGGTCAAATGGTTTAGAAGAGTGTGACATATGAACTCTCTAACTTTAGATGCATCTCTCTAAATCTGTAATATGATATTTTTTCTTTAAAAATAAACTGCTCTCTCTTTTGTCCACGACAGAGCTAACATATTAGTGTATCACATAATTCACTGTGTCGATTTTGTTCACGTTTTCTATTTGTCTTTGATTGTCGATTTATTAACAATACTCACCGTATCTCTTAAATGGTTCTTTCTAGTTGGGAGACCTTATTAGTATGCAACTGTTTGGTGTTTAGGTTAATTATAGTGAGGTTGCCTTGGTAGTGTCAATTGTCAATCAAGATAATTTGATTGATGCTAGTGAGTTTTCATTAGGTTGAGATAAAATGAGGTGAAAAAATCTTAGTTTATGTGCAGTTTCTGCCCAAGTTAGATGGGATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGAGAGGAGATCCATAACAAAAGGCAGCTGGATCAGTACTTGAAATCACACCCAGGTAATCCAGCATCTTCTGAGTTTGATTGGGGTACTGGTGAAACACCTAGAAGATCAGCTAGAATTAGTGAGAAGGCAAAGGCAACTCCCCCCTCACCTCAAATTGAACGGCGTAAGAAACGAACACGAAAACAAGCTCTTTCGAAGAAGGTTGAGGTTAAAGAGACAGTTGTTGTCCCAGACGGTTTCGAGGAGGCAGGAGTTCATAAGGAAGACGAGACCAACGTCGCTAGCAAGGTGAAAGAAATACACGAGGAGGAAAAGTATGAAAATAGAAAACTAGAAGATGAGAATGTGAAAGCTGAAACCACCCCCACCCCTGCCGAAATGGCTGAAGAGGGGTGGCGAATTGATGGCAACGAATGCAAGAAGCTTGCTAAAACGAAGCAGGGAAGTGAGGGTTCTGAGGATGCAAGAAAGGAAAATCAAAATTTGGAAGGAACAAATGGGGAAGAGAAGGTTCAACTTCAAAATGATGCAAAGGAATCCATTCCAGAAGAAATAACAGCTGAAGTTCAAAGAAACAACCAAGACGAACTTAGTGTGCAACAAATAACATGA

mRNA sequence

ATGGCGAGCACACTGGAAAAACAGGGGTCTAAAGAGGATATTCTGTTCCTGGAATTGCCTGCTCCTCTTGGTTGGAACAAAAAGTTTCTGCCCAAGTTAGATGGGATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGAGAGGAGATCCATAACAAAAGGCAGCTGGATCAGTACTTGAAATCACACCCAGGTAATCCAGCATCTTCTGAGTTTGATTGGGGTACTGGTGAAACACCTAGAAGATCAGCTAGAATTAGTGAGAAGGCAAAGGCAACTCCCCCCTCACCTCAAATTGAACGGCGTAAGAAACGAACACGAAAACAAGCTCTTTCGAAGAAGGTTGAGGTTAAAGAGACAGTTGTTGTCCCAGACGGTTTCGAGGAGGCAGGAGTTCATAAGGAAGACGAGACCAACGTCGCTAGCAAGGTGAAAGAAATACACGAGGAGGAAAAGTATGAAAATAGAAAACTAGAAGATGAGAATGTGAAAGCTGAAACCACCCCCACCCCTGCCGAAATGGCTGAAGAGGGGTGGCGAATTGATGGCAACGAATGCAAGAAGCTTGCTAAAACGAAGCAGGGAAGTGAGGGTTCTGAGGATGCAAGAAAGGAAAATCAAAATTTGGAAGGAACAAATGGGGAAGAGAAGGTTCAACTTCAAAATGATGCAAAGGAATCCATTCCAGAAGAAATAACAGCTGAAGTTCAAAGAAACAACCAAGACGAACTTAGTGTGCAACAAATAACATGA

Coding sequence (CDS)

ATGGCGAGCACACTGGAAAAACAGGGGTCTAAAGAGGATATTCTGTTCCTGGAATTGCCTGCTCCTCTTGGTTGGAACAAAAAGTTTCTGCCCAAGTTAGATGGGATCACTAAGAAAAATGAAATCATCTTCATAGCTCCTACAGGAGAGGAGATCCATAACAAAAGGCAGCTGGATCAGTACTTGAAATCACACCCAGGTAATCCAGCATCTTCTGAGTTTGATTGGGGTACTGGTGAAACACCTAGAAGATCAGCTAGAATTAGTGAGAAGGCAAAGGCAACTCCCCCCTCACCTCAAATTGAACGGCGTAAGAAACGAACACGAAAACAAGCTCTTTCGAAGAAGGTTGAGGTTAAAGAGACAGTTGTTGTCCCAGACGGTTTCGAGGAGGCAGGAGTTCATAAGGAAGACGAGACCAACGTCGCTAGCAAGGTGAAAGAAATACACGAGGAGGAAAAGTATGAAAATAGAAAACTAGAAGATGAGAATGTGAAAGCTGAAACCACCCCCACCCCTGCCGAAATGGCTGAAGAGGGGTGGCGAATTGATGGCAACGAATGCAAGAAGCTTGCTAAAACGAAGCAGGGAAGTGAGGGTTCTGAGGATGCAAGAAAGGAAAATCAAAATTTGGAAGGAACAAATGGGGAAGAGAAGGTTCAACTTCAAAATGATGCAAAGGAATCCATTCCAGAAGAAATAACAGCTGAAGTTCAAAGAAACAACCAAGACGAACTTAGTGTGCAACAAATAACATGA

Protein sequence

MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVKETVVVPDGFEEAGVHKEDETNVASKVKEIHEEEKYENRKLEDENVKAETTPTPAEMAEEGWRIDGNECKKLAKTKQGSEGSEDARKENQNLEGTNGEEKVQLQNDAKESIPEEITAEVQRNNQDELSVQQIT*

Homology

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BLAST of Chy2G042840 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29
Identity = 102/246 (41.46%), Postives = 134/246 (54.47%), Query Frame = 0


Query: 9   GSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGN 68
           G +E+++ +ELPAP  W K F P   G  KK E++F+APTGEEI N++QL+QYLKSHPGN
Sbjct: 2   GGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGN 61

Query: 69  PASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTR-KQALSKKVEVKETVVVPD 128
           PA +EFDW T  TPRRSARISEK KAT PSP  E  KKR R K  +SKK    E      
Sbjct: 62  PAIAEFDWTTSGTPRRSARISEKTKAT-PSPDKEPPKKRGRTKSPVSKKDAEGEK--SEG 121

Query: 129 GFEEAGVHKEDETN----VASKVKEIHEEEKYENRKLED--ENVKAETTPTPAEMAEEGW 188
           G EE    K+ E N    +A       +    E  ++ D  EN+ AE TP  A + EEG 
Sbjct: 122 GGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEG- 181

Query: 189 RIDGNECKKLAKTKQGSEGSEDARKENQNLEGTNGEEK--VQLQNDAKESIPEEITAEVQ 246
                E  K    ++  +  +D  KE    + T   EK  V ++    E+  E+  +E +
Sbjct: 182 -----ESMK----EKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAE 234

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BLAST of Chy2G042840 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29
Identity = 105/272 (38.60%), Postives = 145/272 (53.31%), Query Frame = 0


Query: 12  EDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNPAS 71
           ++++ +ELPAP  W K F PK  G  +K EI+F+APTGEEI +++QL+QYLK+HPGNP  
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 72  SEFDWGTGETPRRSARISEKAKATPPSPQIE-----RRK---KRTRKQALSKKVE--VKE 131
           SEF+W TGETPRRS+RIS+K KAT P+P  E     RR    K+  K+A  K  E  VKE
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNEEAAVKE 124

Query: 132 TV-VVPDG-FEEAGVHKEDE----TNVASKVKEIHEEEKYENRKLEDENVKAE------T 191
            + V  DG  E A   KE E    T +A   KE +E EK E  K+  E  K E      T
Sbjct: 125 NMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQT 184

Query: 192 TPTPAEMAEEGWR--IDGNECKKLAKTKQGSE----------GSEDARKENQNLEGTNGE 250
               AE  +EG +   +  E + +   K+  E          GS +  +E   +EG    
Sbjct: 185 EIAEAEKEKEGEKAEAENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDT 244

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BLAST of Chy2G042840 vs. ExPASy TrEMBL
Match: A0A1S3B9A2 (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103487437 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 7.1e-99
Identity = 196/217 (90.32%), Postives = 201/217 (92.63%), Query Frame = 0


Query: 1   MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MASTLEKQGSKED+LFLELPAP GWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ
Sbjct: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120
           YLKSHPGN ASSEFDWGTGETPRRSARISEKAKATPPSP IER KKRTRKQAL KK E K
Sbjct: 61  YLKSHPGNLASSEFDWGTGETPRRSARISEKAKATPPSPHIERPKKRTRKQALLKKFEDK 120

Query: 121 ETVVVPDGFEEAGVHKEDETNVASKVKEIHEEEKYENRKLEDENVKAETTPTPAEMAEEG 180
           ETVVVPDGFEEAGVHKEDETNV S+VKEI  E KYENRKLEDE +KAETTPTPAEMAEEG
Sbjct: 121 ETVVVPDGFEEAGVHKEDETNVDSEVKEIQVEGKYENRKLEDEKLKAETTPTPAEMAEEG 180

Query: 181 WRIDGNECKKLAKTKQGSEGSEDARKENQNLEGTNGE 218
            + D +ECKKLAKTKQGSEGSEDARKENQNLEGT GE
Sbjct: 181 RQSDDDECKKLAKTKQGSEGSEDARKENQNLEGTKGE 217

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BLAST of Chy2G042840 vs. ExPASy TrEMBL
Match: A0A5A7U4J5 (Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001110 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 7.1e-99
Identity = 196/217 (90.32%), Postives = 201/217 (92.63%), Query Frame = 0


Query: 1   MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MASTLEKQGSKED+LFLELPAP GWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ
Sbjct: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120
           YLKSHPGN ASSEFDWGTGETPRRSARISEKAKATPPSP IER KKRTRKQAL KK E K
Sbjct: 61  YLKSHPGNLASSEFDWGTGETPRRSARISEKAKATPPSPHIERPKKRTRKQALLKKFEDK 120

Query: 121 ETVVVPDGFEEAGVHKEDETNVASKVKEIHEEEKYENRKLEDENVKAETTPTPAEMAEEG 180
           ETVVVPDGFEEAGVHKEDETNV S+VKEI  E KYENRKLEDE +KAETTPTPAEMAEEG
Sbjct: 121 ETVVVPDGFEEAGVHKEDETNVDSEVKEIQVEGKYENRKLEDEKLKAETTPTPAEMAEEG 180

Query: 181 WRIDGNECKKLAKTKQGSEGSEDARKENQNLEGTNGE 218
            + D +ECKKLAKTKQGSEGSEDARKENQNLEGT GE
Sbjct: 181 RQSDDDECKKLAKTKQGSEGSEDARKENQNLEGTKGE 217

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BLAST of Chy2G042840 vs. ExPASy TrEMBL
Match: A0A6J1CUB2 (methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111014413 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.4e-62
Identity = 154/245 (62.86%), Postives = 181/245 (73.88%), Query Frame = 0


Query: 1   MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAST+ K+GS ED+LFLELPAP GW KKFLPKLDGITKK EIIF+APTGEEI+ KRQL Q
Sbjct: 18  MASTV-KEGSNEDLLFLELPAPPGWKKKFLPKLDGITKKKEIIFLAPTGEEINGKRQLHQ 77

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120
           YLKSHPGNPASSEFDWGTGETPR+SARISE+ KA  P P+IE  KKRTRK A+SKK + K
Sbjct: 78  YLKSHPGNPASSEFDWGTGETPRKSARISERVKAA-PLPRIEWPKKRTRKLAVSKK-DDK 137

Query: 121 ETVVVPDGFEEA-GVHKEDETNVASKVKEIHEEEKYENRKLEDENVKAETTPTP----AE 180
           E  VV DG EEA  VHK+D     S V +   +   ENR L+DE+V+    P P    +E
Sbjct: 138 EADVVLDGSEEARAVHKQDADKYESGVTD--GKGNQENRTLQDEDVETAPAPAPVLASSE 197

Query: 181 MAEEGWRIDGNECKKLAKTKQGS-------EGSEDARKENQNLEGTNGEEKVQLQNDAKE 234
            AEEG ++DG EC+  A+ + GS       EGSEDA K ++NL+GT GEEKVQLQ+DAKE
Sbjct: 198 PAEEGQQLDGEECENPAEIEWGSAEGNKETEGSEDATKGSRNLDGTKGEEKVQLQDDAKE 257

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BLAST of Chy2G042840 vs. ExPASy TrEMBL
Match: F6HHA3 (MBD domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g05580 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.8e-41
Identity = 118/230 (51.30%), Postives = 151/230 (65.65%), Query Frame = 0


Query: 1   MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAS++E    K++++ LELPAP GW KKF+PK     KKNEIIF +PTGEEI++KRQL+Q
Sbjct: 1   MASSVE----KDEVVSLELPAPPGWKKKFMPKRGLTPKKNEIIFTSPTGEEINSKRQLEQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120
           YLKSHPG PA  EFDWGTGETPRRSARISEKAKATPP  ++E  KKR+RK + SKK + K
Sbjct: 61  YLKSHPGGPAIQEFDWGTGETPRRSARISEKAKATPPR-ELEPAKKRSRKSSASKK-DNK 120

Query: 121 ETVVVPDGFEEAGVH----KEDETNVASKV-KEIHEEEKYENR-KLEDENVKAETTPTPA 180
           ET  +PD  E   VH    K+ E N  +++ K++  E   E + K ED N K E  P   
Sbjct: 121 ETETIPDETETKEVHMQEAKKTEDNAEAEIQKDVVNENLIETKDKAEDVNTKTEEAPPEG 180

Query: 181 EMAEEGWRI--DGNECKKLAKTKQGSEG--SEDARKENQNLEGTNGEEKV 221
              E+  +I  D  E KK A+ + G +G  SE A+ E ++ EGT  +E V
Sbjct: 181 TQVEQDVKIPDDAEEGKKNAEKEPGEKGGDSEVAQNEKESTEGTEVQENV 224

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BLAST of Chy2G042840 vs. ExPASy TrEMBL
Match: A0A7N2L1T6 (MBD domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 8.8e-41
Identity = 117/240 (48.75%), Postives = 153/240 (63.75%), Query Frame = 0


Query: 1   MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAS++E+ G +E+++ +ELPAP GW KKFLPK  G  KKNEIIF +PTGEEI +KRQL+Q
Sbjct: 1   MASSVEEAG-REEVVSVELPAPPGWKKKFLPKQSGTPKKNEIIFTSPTGEEIVSKRQLEQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120
           YLK+HPG P +SEFDWGTGETPRRSARISEK KATPP P+ E  KKR+RK +  K  + K
Sbjct: 61  YLKAHPGGPTASEFDWGTGETPRRSARISEKTKATPP-PESETPKKRSRKSSAKKDDKEK 120

Query: 121 ETVVVPDGFEEA-GVHKED-----ETNVASKVKEIHEEEKYENRKLEDENVKAETTPTPA 180
           ET   P+G EE   VH ED     + NV +K +++  ++  E+ K +D + K E  P P 
Sbjct: 121 ET--APEGTEETKEVHMEDAEKSEKDNVDAKTEKVDVKQNQEDNKAQDTDTKTEAIP-PE 180

Query: 181 E-----------MAEEGWRIDGNECKKLAKTKQG--SEGSEDARKENQNLEGTNGEEKVQ 222
           E            AEE  +    E +   +T  G  +EGS+  + EN+ LEG   +EK Q
Sbjct: 181 EGKVGLEGNIPNDAEESKKTSEAELESSKETLVGKEAEGSKVTQNENEKLEGEKVQEKAQ 235

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BLAST of Chy2G042840 vs. NCBI nr
Match: XP_004150031.1 (methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8653112.1 hypothetical protein Csa_019891 [Cucumis sativus])

HSP 1 Score: 439 bits (1128), Expect = 4.09e-154
Identity = 235/250 (94.00%), Postives = 238/250 (95.20%), Query Frame = 0


Query: 1   MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MASTLEKQGSKE ILFLELPAP GWNKKFLPKLDGITKKNEIIFIAPTGE IHNKRQLDQ
Sbjct: 1   MASTLEKQGSKEGILFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEAIHNKRQLDQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120
           YLKSHPGNPASSEFDW TGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK
Sbjct: 61  YLKSHPGNPASSEFDWRTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120

Query: 121 ETVVVPDGFEEAGVHKEDETNVASKVKEIHEEEKYENRKLEDENVKAETTPTPAEMAEEG 180
           ETVVVP G EE GVHKEDETNV S+VKEIHEEEKYENRKLEDEN KAETTPTPAEMAEEG
Sbjct: 121 ETVVVPYGLEEVGVHKEDETNVDSEVKEIHEEEKYENRKLEDENGKAETTPTPAEMAEEG 180

Query: 181 WRIDGNECKKLAKTKQGSEGSEDARKENQNLEGTNGEEKVQLQNDAKESIPEEITAEVQR 240
           WRIDG+E +KLAKTKQGSEGSEDARKENQNLEGTNGEEKVQLQNDAKESI EEITAEVQR
Sbjct: 181 WRIDGDEWEKLAKTKQGSEGSEDARKENQNLEGTNGEEKVQLQNDAKESISEEITAEVQR 240

Query: 241 NNQDELSVQQ 250
           NNQDELSV Q
Sbjct: 241 NNQDELSVPQ 250

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BLAST of Chy2G042840 vs. NCBI nr
Match: XP_008443980.1 (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >XP_008443981.1 PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >KAA0050154.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa] >TYK06410.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 369 bits (946), Expect = 6.21e-127
Identity = 196/217 (90.32%), Postives = 201/217 (92.63%), Query Frame = 0


Query: 1   MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MASTLEKQGSKED+LFLELPAP GWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ
Sbjct: 1   MASTLEKQGSKEDVLFLELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120
           YLKSHPGN ASSEFDWGTGETPRRSARISEKAKATPPSP IER KKRTRKQAL KK E K
Sbjct: 61  YLKSHPGNLASSEFDWGTGETPRRSARISEKAKATPPSPHIERPKKRTRKQALLKKFEDK 120

Query: 121 ETVVVPDGFEEAGVHKEDETNVASKVKEIHEEEKYENRKLEDENVKAETTPTPAEMAEEG 180
           ETVVVPDGFEEAGVHKEDETNV S+VKEI  E KYENRKLEDE +KAETTPTPAEMAEEG
Sbjct: 121 ETVVVPDGFEEAGVHKEDETNVDSEVKEIQVEGKYENRKLEDEKLKAETTPTPAEMAEEG 180

Query: 181 WRIDGNECKKLAKTKQGSEGSEDARKENQNLEGTNGE 217
            + D +ECKKLAKTKQGSEGSEDARKENQNLEGT GE
Sbjct: 181 RQSDDDECKKLAKTKQGSEGSEDARKENQNLEGTKGE 217

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BLAST of Chy2G042840 vs. NCBI nr
Match: XP_038880161.1 (methyl-CpG-binding domain-containing protein 11-like isoform X2 [Benincasa hispida])

HSP 1 Score: 365 bits (938), Expect = 4.21e-125
Identity = 199/257 (77.43%), Postives = 220/257 (85.60%), Query Frame = 0


Query: 1   MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAST EKQGSKED+LF+ELPAP GWNKKFLPKLDGITKKNEIIFIAPTGEEIH+KRQLDQ
Sbjct: 1   MASTWEKQGSKEDVLFVELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHSKRQLDQ 60

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120
           YLKSHPGNPASSEFDWGTGETPRRSARISEKAKA PPSPQIER KKRTRKQ LS+K + K
Sbjct: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKAAPPSPQIERPKKRTRKQPLSRKDDNK 120

Query: 121 ETVVVPDGFEEAGVHKEDETNVASKVKEIHEEEKYENRKLEDENVKAETTPTPAEMAEEG 180
           E  VVPDGFEE GVHKE+ET V  KVK+I+ E   EN KL++ENVK ET PTP E+AEEG
Sbjct: 121 EADVVPDGFEEKGVHKENETEVDGKVKKIYVEGNDENSKLKEENVKDETIPTPIEVAEEG 180

Query: 181 WRIDGNECKKLAKTKQGSEGSEDARKENQNLEGTNGEEKVQLQNDAKESI---------- 240
             IDG+EC+KLA+T+Q SEGSE+ARKENQ+LEGT GEE+VQLQ+DAKESI          
Sbjct: 181 RGIDGDECEKLAETEQASEGSENARKENQSLEGTKGEEEVQLQDDAKESISTCSKDKAAI 240

Query: 241 PEEITAEVQRNNQDELS 247
           PEE T EVQRNNQD+L+
Sbjct: 241 PEETTVEVQRNNQDQLN 257

[Close]

BLAST of Chy2G042840 vs. NCBI nr
Match: XP_038880160.1 (methyl-CpG-binding domain-containing protein 11-like isoform X1 [Benincasa hispida])

HSP 1 Score: 365 bits (938), Expect = 1.48e-124
Identity = 199/257 (77.43%), Postives = 220/257 (85.60%), Query Frame = 0


Query: 1   MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAST EKQGSKED+LF+ELPAP GWNKKFLPKLDGITKKNEIIFIAPTGEEIH+KRQLDQ
Sbjct: 37  MASTWEKQGSKEDVLFVELPAPPGWNKKFLPKLDGITKKNEIIFIAPTGEEIHSKRQLDQ 96

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120
           YLKSHPGNPASSEFDWGTGETPRRSARISEKAKA PPSPQIER KKRTRKQ LS+K + K
Sbjct: 97  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKAAPPSPQIERPKKRTRKQPLSRKDDNK 156

Query: 121 ETVVVPDGFEEAGVHKEDETNVASKVKEIHEEEKYENRKLEDENVKAETTPTPAEMAEEG 180
           E  VVPDGFEE GVHKE+ET V  KVK+I+ E   EN KL++ENVK ET PTP E+AEEG
Sbjct: 157 EADVVPDGFEEKGVHKENETEVDGKVKKIYVEGNDENSKLKEENVKDETIPTPIEVAEEG 216

Query: 181 WRIDGNECKKLAKTKQGSEGSEDARKENQNLEGTNGEEKVQLQNDAKESI---------- 240
             IDG+EC+KLA+T+Q SEGSE+ARKENQ+LEGT GEE+VQLQ+DAKESI          
Sbjct: 217 RGIDGDECEKLAETEQASEGSENARKENQSLEGTKGEEEVQLQDDAKESISTCSKDKAAI 276

Query: 241 PEEITAEVQRNNQDELS 247
           PEE T EVQRNNQD+L+
Sbjct: 277 PEETTVEVQRNNQDQLN 293

[Close]

BLAST of Chy2G042840 vs. NCBI nr
Match: XP_022144823.1 (methyl-CpG-binding domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 248 bits (633), Expect = 9.10e-78
Identity = 157/247 (63.56%), Postives = 182/247 (73.68%), Query Frame = 0


Query: 1   MASTLEKQGSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQ 60
           MAST+ K+GS ED+LFLELPAP GW KKFLPKLDGITKK EIIF+APTGEEI+ KRQL Q
Sbjct: 18  MASTV-KEGSNEDLLFLELPAPPGWKKKFLPKLDGITKKKEIIFLAPTGEEINGKRQLHQ 77

Query: 61  YLKSHPGNPASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKVEVK 120
           YLKSHPGNPASSEFDWGTGETPR+SARISE+ KA P  P+IE  KKRTRK A+SKK + K
Sbjct: 78  YLKSHPGNPASSEFDWGTGETPRKSARISERVKAAP-LPRIEWPKKRTRKLAVSKKDD-K 137

Query: 121 ETVVVPDGFEEA-GVHKEDETNVASKVKEIHEEEKYENRKLEDENVKAETTPTPA----- 180
           E  VV DG EEA  VHK+D     S V +   +   ENR L+DE+V  ET P PA     
Sbjct: 138 EADVVLDGSEEARAVHKQDADKYESGVTDG--KGNQENRTLQDEDV--ETAPAPAPVLAS 197

Query: 181 -EMAEEGWRIDGNECKKLAKTKQGS-------EGSEDARKENQNLEGTNGEEKVQLQNDA 233
            E AEEG ++DG EC+  A+ + GS       EGSEDA K ++NL+GT GEEKVQLQ+DA
Sbjct: 198 SEPAEEGQQLDGEECENPAEIEWGSAEGNKETEGSEDATKGSRNLDGTKGEEKVQLQDDA 257

[Close]

BLAST of Chy2G042840 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 102/246 (41.46%), Postives = 134/246 (54.47%), Query Frame = 0


Query: 9   GSKEDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGN 68
           G +E+++ +ELPAP  W K F P   G  KK E++F+APTGEEI N++QL+QYLKSHPGN
Sbjct: 2   GGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGN 61

Query: 69  PASSEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTR-KQALSKKVEVKETVVVPD 128
           PA +EFDW T  TPRRSARISEK KAT PSP  E  KKR R K  +SKK    E      
Sbjct: 62  PAIAEFDWTTSGTPRRSARISEKTKAT-PSPDKEPPKKRGRTKSPVSKKDAEGEK--SEG 121

Query: 129 GFEEAGVHKEDETN----VASKVKEIHEEEKYENRKLED--ENVKAETTPTPAEMAEEGW 188
           G EE    K+ E N    +A       +    E  ++ D  EN+ AE TP  A + EEG 
Sbjct: 122 GGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEG- 181

Query: 189 RIDGNECKKLAKTKQGSEGSEDARKENQNLEGTNGEEK--VQLQNDAKESIPEEITAEVQ 246
                E  K    ++  +  +D  KE    + T   EK  V ++    E+  E+  +E +
Sbjct: 182 -----ESMK----EKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAE 234

[Close]

BLAST of Chy2G042840 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 )

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30
Identity = 105/272 (38.60%), Postives = 145/272 (53.31%), Query Frame = 0


Query: 12  EDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNPAS 71
           ++++ +ELPAP  W K F PK  G  +K EI+F+APTGEEI +++QL+QYLK+HPGNP  
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 72  SEFDWGTGETPRRSARISEKAKATPPSPQIE-----RRK---KRTRKQALSKKVE--VKE 131
           SEF+W TGETPRRS+RIS+K KAT P+P  E     RR    K+  K+A  K  E  VKE
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNEEAAVKE 124

Query: 132 TV-VVPDG-FEEAGVHKEDE----TNVASKVKEIHEEEKYENRKLEDENVKAE------T 191
            + V  DG  E A   KE E    T +A   KE +E EK E  K+  E  K E      T
Sbjct: 125 NMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQT 184

Query: 192 TPTPAEMAEEGWR--IDGNECKKLAKTKQGSE----------GSEDARKENQNLEGTNGE 250
               AE  +EG +   +  E + +   K+  E          GS +  +E   +EG    
Sbjct: 185 EIAEAEKEKEGEKAEAENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDT 244

[Close]

BLAST of Chy2G042840 vs. TAIR 10
Match: AT1G15340.2 (methyl-CPG-binding domain 10 )

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-12
Identity = 69/242 (28.51%), Postives = 112/242 (46.28%), Query Frame = 0


Query: 12  EDILFLELPAPLGWNKKFLPKLDGITKKNEIIFIAPTGEEIHNKRQLDQYLKSHPGNPAS 71
           ++++ +ELPAP  W K F PK  G  +K EI+F+APTGEEI +++QL+QYLK +      
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKDNKEAAEK 64

Query: 72  SEFDWGTGETPRRSARISEKAKATPPSPQIERRKKRTRKQALSKKV----EVKETVVVPD 131
           +E         + +  + +  K      + E+ K+   + A ++K     E  E   V  
Sbjct: 65  NE-----EAAVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNK 124

Query: 132 GFEEAGVHKEDETNVASKVKEIHEEEKYENRKLEDENVKAETTPTPAEMAEEGWRIDGNE 191
             E+    KE +T +A   KE       E  K E EN +AE      E  E    +D +E
Sbjct: 125 EGEKTEAGKEGQTEIAEAEKE------KEGEKAEAENKEAEVVRDKKESME----VDTSE 184

Query: 192 CKKLAKTKQGSEGSEDARKENQNLEGTNGEEKVQLQNDAKESIPEEITAEVQRNNQDELS 250
            +K A + +G+E       E   +EG    E  + Q    E+  E+  AE +  N+  ++
Sbjct: 185 LEKKAGSGEGAE-------EPSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVT 224

The following BLAST results are available for this feature:

BLAST of Chy2G042840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW00	1.5e-29	41.46	Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9XI36	2.0e-29	38.60	Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Chy2G042840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9A2	7.1e-99	90.32	methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7U4J5	7.1e-99	90.32	Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa...	[more]
A0A6J1CUB2	2.4e-62	62.86	methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3...	[more]
F6HHA3	1.8e-41	51.30	MBD domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g05580 PE...	[more]
A0A7N2L1T6	8.8e-41	48.75	MBD domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Chy2G042840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150031.1	4.09e-154	94.00	methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8653112.1 ...	[more]
XP_008443980.1	6.21e-127	90.32	PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >...	[more]
XP_038880161.1	4.21e-125	77.43	methyl-CpG-binding domain-containing protein 11-like isoform X2 [Benincasa hispi...	[more]
XP_038880160.1	1.48e-124	77.43	methyl-CpG-binding domain-containing protein 11-like isoform X1 [Benincasa hispi...	[more]
XP_022144823.1	9.10e-78	63.56	methyl-CpG-binding domain-containing protein 11-like [Momordica charantia]	[more]

BLAST of Chy2G042840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15790.1	1.1e-30	41.46	methyl-CPG-binding domain 11	[more]
AT1G15340.1	1.4e-30	38.60	methyl-CPG-binding domain 10	[more]
AT1G15340.2	2.2e-12	28.51	methyl-CPG-binding domain 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..170
None	No IPR available	GENE3D	3.30.890.10		coord: 3..120 e-value: 9.6E-10 score: 40.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..252
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 18..80 e-value: 6.1E-9 score: 35.5
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 11..81 score: 12.549629
IPR039622	Methyl-CpG-binding domain-containing protein 10/11	PANTHER	PTHR33729	METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 9..237
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 13..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G042840.1	Chy2G042840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding