Chy2G042600 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G042600
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH02: 23721444 .. 23722183 (-)
RNA-Seq Expression	Chy2G042600
Synteny	Chy2G042600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCCAAGTTTCAACATGACCACAACCTGTTTGATCAAAGTTCTCCAAATGCAGTCTTTTTCAACCGCGCTTTGCTCAATTACTTGCCCAGAGACGGAGCATTTCAATCCCTTCGCTTTTTTAAGAACAATTTTCAGTGGGGTCTTGATGGTAATGCCGATGAGTTCACTTTGGTTCTTGCTCTGAAGGCCTGTTGTGGGCTTCCTAAACTAGGTAGACAAATTCATGGATTTGTTATTTCTTCTGGGTTTGTTTCCCATATTACATCTCTAACTCTTTGATGAATATGTACTGTAGATCTGGGCAGCTTGAGAGGGCTTTTAGTGTATTCGAAAATTTACATGACCCAGATATTGTTTCGTGGAATACGTTTCTTTCCGGGTTCGAGAAGAGTGAGAACGCTTTGAGTTTTGCTCGGAGGATGAATTTAAAAGGGGTTGAGTTTGATTCTGTGACTTATACTACAGCACTTTCCTTTCGCTTAGATGGAAAAGATTTTCTTTTTGGTTGGCAGTTGCATACTCTTGCCCTGAAATGTGGATTCAAAGGTGATGTTTTTGTTGGAAATGCTCTGGTTACAATGTATTCGAGGTGGGAACATCTTGTAGATGCTAGAAAAGTGTTTGATGAAATGCCGAGCCGAGATCGGGTGCTCTGGAGTGCGATGATTACTGATTATGCACAAGAGGGAAATAATGGGTTACAGGCCATTTTGGTGTTCGTTCAAATGGTGTGA

mRNA sequence

ATGATTCCCAAGTTTCAACATGACCACAACCTGTTTGATCAAAGTTCTCCAAATGCAGTCTTTTTCAACCGCGCTTTGCTCAATTACTTGCCCAGAGACGGAGCATTTCAATCCCTTCGCTTTTTTAAGAACAATTTTCAGTGGGGTCTTGATGGTAATGCCGATGAGTTCACTTTGGTTCTTGCTCTGAAGGCCTGTTGTGGGCTTCCTAAACTAGGTAGACAAATTCATGGATTTGTTATTTCTTCTGGATCTGGGCAGCTTGAGAGGGCTTTTAGTGTATTCGAAAATTTACATGACCCAGATATTGTTTCGTGGAATACGTTTCTTTCCGGGTTCGAGAAGAGTGAGAACGCTTTGAGTTTTGCTCGGAGGATGAATTTAAAAGGGGTTGAGTTTGATTCTGTGACTTATACTACAGCACTTTCCTTTCGCTTAGATGGAAAAGATTTTCTTTTTGGTTGGCAGTTGCATACTCTTGCCCTGAAATGTGGATTCAAAGGTGATGTTTTTGTTGGAAATGCTCTGGTTACAATGTATTCGAGGTGGGAACATCTTGTAGATGCTAGAAAAGTGTTTGATGAAATGCCGAGCCGAGATCGGGTGCTCTGGAGTGCGATGATTACTGATTATGCACAAGAGGGAAATAATGGGTTACAGGCCATTTTGGTGTTCGTTCAAATGGTGTGA

Coding sequence (CDS)

ATGATTCCCAAGTTTCAACATGACCACAACCTGTTTGATCAAAGTTCTCCAAATGCAGTCTTTTTCAACCGCGCTTTGCTCAATTACTTGCCCAGAGACGGAGCATTTCAATCCCTTCGCTTTTTTAAGAACAATTTTCAGTGGGGTCTTGATGGTAATGCCGATGAGTTCACTTTGGTTCTTGCTCTGAAGGCCTGTTGTGGGCTTCCTAAACTAGGTAGACAAATTCATGGATTTGTTATTTCTTCTGGATCTGGGCAGCTTGAGAGGGCTTTTAGTGTATTCGAAAATTTACATGACCCAGATATTGTTTCGTGGAATACGTTTCTTTCCGGGTTCGAGAAGAGTGAGAACGCTTTGAGTTTTGCTCGGAGGATGAATTTAAAAGGGGTTGAGTTTGATTCTGTGACTTATACTACAGCACTTTCCTTTCGCTTAGATGGAAAAGATTTTCTTTTTGGTTGGCAGTTGCATACTCTTGCCCTGAAATGTGGATTCAAAGGTGATGTTTTTGTTGGAAATGCTCTGGTTACAATGTATTCGAGGTGGGAACATCTTGTAGATGCTAGAAAAGTGTTTGATGAAATGCCGAGCCGAGATCGGGTGCTCTGGAGTGCGATGATTACTGATTATGCACAAGAGGGAAATAATGGGTTACAGGCCATTTTGGTGTTCGTTCAAATGGTGTGA

Protein sequence

MIPKFQHDHNLFDQSSPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIHGFVISSGSGQLERAFSVFENLHDPDIVSWNTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQMV*

Homology

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BLAST of Chy2G042600 vs. ExPASy Swiss-Prot
Match: Q84MA3 (Pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E40 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-46
Identity = 102/241 (42.32%), Postives = 142/241 (58.92%), Query Frame = 0


Query: 9   HNLFDQSSPN--AVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDG-NADEFTLVLALKA 68
           H LFD SS        N ++   L R+   ++L  FK N Q G  G + DE TL LALKA
Sbjct: 28  HKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKA 87

Query: 69  CCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSWNT 128
           C G  K G QIHGF  +SG                 +G+ + A  +FENL DPD+VSWNT
Sbjct: 88  CRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNT 147

Query: 129 FLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKG 188
            LSGF+ ++ AL+F  RM   GV FD+ TY+TALSF +  + FL G QL +  +K G + 
Sbjct: 148 ILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLES 207

Query: 189 DVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM 230
           D+ VGN+ +TMYSR      AR+VFDEM  +D + W+++++  +QEG  G +A+++F  M
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267

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BLAST of Chy2G042600 vs. ExPASy Swiss-Prot
Match: Q9SCT2 (Pentatricopeptide repeat-containing protein At3g50420 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E85 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.1e-26
Identity = 74/234 (31.62%), Postives = 117/234 (50.00%), Query Frame = 0


Query: 18  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKAC--CGLPKLGRQ 77
           +AV +N  ++  L  D     L FF+N    G+D    +FT  + L  C   G   LG+ 
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVD--PTQFTYSIVLNGCSKLGSYSLGKL 323

Query: 78  IHGFVISSGS-----------------GQLERAFSVFENLHDPDIVSWNTFLSGFEKS-- 137
           IH  +I S S                 G +  AF VF  +H+P++VSWN+ +SG  ++  
Sbjct: 324 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGF 383

Query: 138 --ENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGN 197
             +  L + R + +     D  T++ A+S   + + F+ G  LH    K G++  VFVG 
Sbjct: 384 GEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGT 443

Query: 198 ALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM 229
            L++MY +      A+KVFD M  RD VLW+ MI  +++ GN+ L A+  F++M
Sbjct: 444 TLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSEL-AVQFFIEM 494

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BLAST of Chy2G042600 vs. ExPASy Swiss-Prot
Match: Q9FM64 (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR21 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-21
Identity = 58/231 (25.11%), Postives = 117/231 (50.65%), Query Frame = 0


Query: 18  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIH 77
           NAV +N  ++ Y+      +++R F +  + G++      +  L+  A  G  + G+Q H
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297

Query: 78  GFVISSGS-----------------GQLERAFSVFENLHDPDIVSWNTFLSGFEKS---E 137
              I +G                  G +E A  VF+ + + D+V+WN  +SG+ +    E
Sbjct: 298 AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVE 357

Query: 138 NALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALV 197
           +A+   + M L+ +++D VT  T +S     ++   G ++    ++  F+ D+ + + ++
Sbjct: 358 DAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVM 417

Query: 198 TMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM 229
            MY++   +VDA+KVFD    +D +LW+ ++  YA+ G +G +A+ +F  M
Sbjct: 418 DMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG-EALRLFYGM 467

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BLAST of Chy2G042600 vs. ExPASy Swiss-Prot
Match: O80647 (Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E33 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.2e-21
Identity = 65/187 (34.76%), Postives = 101/187 (54.01%), Query Frame = 0


Query: 59  LVLALKACCGLPKLGRQIHGFVISSG---SGQLERAFS----------VFENLHDPDIVS 118
           L+L L+ C     L  Q+HG +I SG     QL  A+S          +F+++ DP +V 
Sbjct: 8   LLLMLRECKNFRCL-LQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVL 67

Query: 119 WNTFLSGFEKS---ENALSFARRMN-LKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLA 178
           WN+ + G+ ++     AL F   M+  KG++ D  ++T AL       DF  G ++H L 
Sbjct: 68  WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 127

Query: 179 LKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQA 229
            + G + DV++G ALV MY +   LV AR+VFD+M  +D V W+ M++  AQ G +   A
Sbjct: 128 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSS-AA 187

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BLAST of Chy2G042600 vs. ExPASy Swiss-Prot
Match: Q0WNP3 (Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A2 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.2e-21
Identity = 60/184 (32.61%), Postives = 94/184 (51.09%), Query Frame = 0


Query: 54  ADEFTLVLALKAC--CGLPKLGRQIHGFVISSG-----------------SGQLERAFSV 113
           A+  T+V  L+AC   G   LG+++H  +I +                   G+   AF+V
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442

Query: 114 FENLHDPDIVSWNTFLSGFEK---SENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDF 173
            + L   D+VSW   +SG         AL F + M  +GVE +  TY++AL    + +  
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502

Query: 174 LFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDY 216
           L G  +H++A K     +VFVG+AL+ MY++   + +A +VFD MP ++ V W AMI  Y
Sbjct: 503 LIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGY 562

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BLAST of Chy2G042600 vs. ExPASy TrEMBL
Match: A0A0A0LWF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G320370 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 5.1e-112
Identity = 204/241 (84.65%), Postives = 211/241 (87.55%), Query Frame = 0


Query: 5   FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLAL 64
           F+HDHNLFDQS  PNA  FNR LLNYLPRDGAFQSLRFFKNNF+WGLDGNADEFTLVLAL
Sbjct: 23  FRHDHNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLAL 82

Query: 65  KACCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSW 124
           KACCG PKLGRQIHGFVISSG                 SGQLERAFSVF+NLHDPDIVSW
Sbjct: 83  KACCGFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSW 142

Query: 125 NTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGF 184
           NT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LDG++FLFGWQLHTLALKCGF
Sbjct: 143 NTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGF 202

Query: 185 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFV 228
           KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAI VFV
Sbjct: 203 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAIFVFV 262

[Close]

BLAST of Chy2G042600 vs. ExPASy TrEMBL
Match: A0A5D3DTC6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold876G00080 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106
Identity = 200/243 (82.30%), Postives = 206/243 (84.77%), Query Frame = 0


Query: 5   FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLAL 64
           F HD+NLFDQS + NA  FNR LLNYL RDGAFQSLRFFK NF+WGLDGN DEFTL LAL
Sbjct: 28  FHHDYNLFDQSPTSNAASFNRVLLNYLSRDGAFQSLRFFKKNFRWGLDGNTDEFTLALAL 87

Query: 65  KACCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSW 124
           KACCGLPKLGRQIHGFVISSG                 SGQLERAFSVFENLHDPDIVSW
Sbjct: 88  KACCGLPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSW 147

Query: 125 NTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGF 184
           NT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LD +DFLFGWQLHTLALKCG 
Sbjct: 148 NTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDIEDFLFGWQLHTLALKCGL 207

Query: 185 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFV 230
           K DVFVGNALVTMYSR EHLVDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFV
Sbjct: 208 KSDVFVGNALVTMYSRCEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 267

[Close]

BLAST of Chy2G042600 vs. ExPASy TrEMBL
Match: A0A5A7TTA5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00830 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.3e-106
Identity = 198/243 (81.48%), Postives = 206/243 (84.77%), Query Frame = 0


Query: 5   FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLAL 64
           F HD+NLFDQS + NA  FNR LLNYL RDGAFQSLRFFK NF+WGLDGN DEFTL LAL
Sbjct: 28  FHHDYNLFDQSPTSNAASFNRVLLNYLSRDGAFQSLRFFKKNFRWGLDGNTDEFTLALAL 87

Query: 65  KACCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSW 124
           KACCGLPKLGRQIHGFVISSG                 SGQLERAFSVFENLHDPDIVSW
Sbjct: 88  KACCGLPKLGRQIHGFVISSGFFSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSW 147

Query: 125 NTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGF 184
           NT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LD +DFLFGWQLH+LALKCG 
Sbjct: 148 NTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDIEDFLFGWQLHSLALKCGL 207

Query: 185 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFV 230
           + DVFVGNALVTMYSR EHLVDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFV
Sbjct: 208 ESDVFVGNALVTMYSRCEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 267

[Close]

BLAST of Chy2G042600 vs. ExPASy TrEMBL
Match: A0A1S3BA52 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487459 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.3e-106
Identity = 198/243 (81.48%), Postives = 206/243 (84.77%), Query Frame = 0


Query: 5   FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLAL 64
           F HD+NLFDQS + NA  FNR LLNYL RDGAFQSLRFFK NF+WGLDGN DEFTL LAL
Sbjct: 28  FHHDYNLFDQSPTSNAASFNRVLLNYLSRDGAFQSLRFFKKNFRWGLDGNTDEFTLALAL 87

Query: 65  KACCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSW 124
           KACCGLPKLGRQIHGFVISSG                 SGQLERAFSVFENLHDPDIVSW
Sbjct: 88  KACCGLPKLGRQIHGFVISSGFFSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSW 147

Query: 125 NTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGF 184
           NT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LD +DFLFGWQLH+LALKCG 
Sbjct: 148 NTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDIEDFLFGWQLHSLALKCGL 207

Query: 185 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFV 230
           + DVFVGNALVTMYSR EHLVDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFV
Sbjct: 208 ESDVFVGNALVTMYSRCEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 267

[Close]

BLAST of Chy2G042600 vs. ExPASy TrEMBL
Match: A0A6J1EK48 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111434059 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.2e-99
Identity = 183/243 (75.31%), Postives = 201/243 (82.72%), Query Frame = 0


Query: 5   FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLAL 64
           FQHDHNLFDQS  PNA   NR LLNYL R+ AFQ+LR FK + +WGLDGNAD FTL LAL
Sbjct: 28  FQHDHNLFDQSPPPNAASTNRVLLNYLHRNEAFQALRLFKKHIRWGLDGNADGFTLALAL 87

Query: 65  KACCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSW 124
           KACCG+PKLGRQIHGFVISSG                 SGQLERAFSVFENLHDPDIVSW
Sbjct: 88  KACCGVPKLGRQIHGFVISSGLVSNISVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSW 147

Query: 125 NTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGF 184
           NT LSGF+KSE+ALSFA  MNL GV FD VTYTTAL+F LDG+DF+FGWQLHTL LKCGF
Sbjct: 148 NTILSGFQKSESALSFAAWMNLNGVRFDPVTYTTALAFCLDGEDFIFGWQLHTLVLKCGF 207

Query: 185 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFV 230
           + D+FVGNAL+TMYSRWEHLVDAR+VFDEM SRDRV WSAMIT YAQEG++GL+AILVF+
Sbjct: 208 QCDIFVGNALITMYSRWEHLVDARQVFDEMRSRDRVSWSAMITGYAQEGDHGLEAILVFI 267

[Close]

BLAST of Chy2G042600 vs. NCBI nr
Match: KAE8653086.1 (hypothetical protein Csa_019584 [Cucumis sativus])

HSP 1 Score: 415 bits (1066), Expect = 4.14e-141
Identity = 207/243 (85.19%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 5   FQHDHNLFDQSSP-NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLAL 64
           F+HDHNLFDQS P NA  FNR LLNYLPRDGAFQSLRFFKNNF+WGLDGNADEFTLVLAL
Sbjct: 23  FRHDHNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLAL 82

Query: 65  KACCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSW 124
           KACCG PKLGRQIHGFVISSG                 SGQLERAFSVF+NLHDPDIVSW
Sbjct: 83  KACCGFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSW 142

Query: 125 NTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGF 184
           NT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LDG++FLFGWQLHTLALKCGF
Sbjct: 143 NTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGF 202

Query: 185 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFV 229
           KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFV
Sbjct: 203 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 262

[Close]

BLAST of Chy2G042600 vs. NCBI nr
Match: XP_004150024.3 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucumis sativus])

HSP 1 Score: 415 bits (1066), Expect = 9.33e-138
Identity = 207/243 (85.19%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 5   FQHDHNLFDQSSP-NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLAL 64
           F+HDHNLFDQS P NA  FNR LLNYLPRDGAFQSLRFFKNNF+WGLDGNADEFTLVLAL
Sbjct: 23  FRHDHNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLAL 82

Query: 65  KACCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSW 124
           KACCG PKLGRQIHGFVISSG                 SGQLERAFSVF+NLHDPDIVSW
Sbjct: 83  KACCGFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSW 142

Query: 125 NTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGF 184
           NT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LDG++FLFGWQLHTLALKCGF
Sbjct: 143 NTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGF 202

Query: 185 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFV 229
           KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFV
Sbjct: 203 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 262

[Close]

BLAST of Chy2G042600 vs. NCBI nr
Match: TYK26926.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 392 bits (1007), Expect = 7.44e-129
Identity = 200/243 (82.30%), Postives = 206/243 (84.77%), Query Frame = 0


Query: 5   FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLAL 64
           F HD+NLFDQS + NA  FNR LLNYL RDGAFQSLRFFK NF+WGLDGN DEFTL LAL
Sbjct: 28  FHHDYNLFDQSPTSNAASFNRVLLNYLSRDGAFQSLRFFKKNFRWGLDGNTDEFTLALAL 87

Query: 65  KACCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSW 124
           KACCGLPKLGRQIHGFVISSG                 SGQLERAFSVFENLHDPDIVSW
Sbjct: 88  KACCGLPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSW 147

Query: 125 NTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGF 184
           NT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LD +DFLFGWQLHTLALKCG 
Sbjct: 148 NTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDIEDFLFGWQLHTLALKCGL 207

Query: 185 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFV 229
           K DVFVGNALVTMYSR EHLVDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFV
Sbjct: 208 KSDVFVGNALVTMYSRCEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 267

[Close]

BLAST of Chy2G042600 vs. NCBI nr
Match: XP_008444010.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucumis melo] >KAA0046793.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 389 bits (999), Expect = 1.17e-127
Identity = 198/243 (81.48%), Postives = 206/243 (84.77%), Query Frame = 0


Query: 5   FQHDHNLFDQS-SPNAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLAL 64
           F HD+NLFDQS + NA  FNR LLNYL RDGAFQSLRFFK NF+WGLDGN DEFTL LAL
Sbjct: 28  FHHDYNLFDQSPTSNAASFNRVLLNYLSRDGAFQSLRFFKKNFRWGLDGNTDEFTLALAL 87

Query: 65  KACCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSW 124
           KACCGLPKLGRQIHGFVISSG                 SGQLERAFSVFENLHDPDIVSW
Sbjct: 88  KACCGLPKLGRQIHGFVISSGFFSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSW 147

Query: 125 NTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGF 184
           NT LSGFEKSENALSFA RMNL GV+FDSVTYTTALSF LD +DFLFGWQLH+LALKCG 
Sbjct: 148 NTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDIEDFLFGWQLHSLALKCGL 207

Query: 185 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFV 229
           + DVFVGNALVTMYSR EHLVDARKVFDEMPSRDRV WSAMIT YAQEG+NGLQAILVFV
Sbjct: 208 ESDVFVGNALVTMYSRCEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 267

[Close]

BLAST of Chy2G042600 vs. NCBI nr
Match: XP_038878737.1 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 379 bits (974), Expect = 3.32e-124
Identity = 188/243 (77.37%), Postives = 204/243 (83.95%), Query Frame = 0


Query: 5   FQHDHNLFDQSSP-NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLAL 64
           FQHD+NLFDQS P NA   NR LLNYL RDGAFQSLRFFK   +W LDG+ DEFTL LAL
Sbjct: 28  FQHDYNLFDQSPPPNAASTNRVLLNYLHRDGAFQSLRFFKKQIRWSLDGSTDEFTLALAL 87

Query: 65  KACCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSW 124
           KACCGLPKLGRQIHGFVISSG                 SGQLE+AFSVFENLHDPDIVSW
Sbjct: 88  KACCGLPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLEKAFSVFENLHDPDIVSW 147

Query: 125 NTFLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGF 184
           NT LSGF+KSENALSFA RMNL GV+FD VTYTTAL+F LDG+DFLFGWQLHTLALKCG 
Sbjct: 148 NTILSGFQKSENALSFAVRMNLNGVKFDPVTYTTALAFCLDGEDFLFGWQLHTLALKCGL 207

Query: 185 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFV 229
           KGDVFVGNAL+TMYSRWEHLVDAR+VFDEM SRDRV WSAM+T YAQEG++GL+AIL+F+
Sbjct: 208 KGDVFVGNALITMYSRWEHLVDARQVFDEMQSRDRVSWSAMVTGYAQEGDHGLEAILLFI 267

[Close]

BLAST of Chy2G042600 vs. TAIR 10
Match: AT4G32430.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 8.7e-48
Identity = 102/241 (42.32%), Postives = 142/241 (58.92%), Query Frame = 0


Query: 9   HNLFDQSSPN--AVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDG-NADEFTLVLALKA 68
           H LFD SS        N ++   L R+   ++L  FK N Q G  G + DE TL LALKA
Sbjct: 28  HKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKA 87

Query: 69  CCGLPKLGRQIHGFVISSG-----------------SGQLERAFSVFENLHDPDIVSWNT 128
           C G  K G QIHGF  +SG                 +G+ + A  +FENL DPD+VSWNT
Sbjct: 88  CRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNT 147

Query: 129 FLSGFEKSENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKG 188
            LSGF+ ++ AL+F  RM   GV FD+ TY+TALSF +  + FL G QL +  +K G + 
Sbjct: 148 ILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLES 207

Query: 189 DVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM 230
           D+ VGN+ +TMYSR      AR+VFDEM  +D + W+++++  +QEG  G +A+++F  M
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267

[Close]

BLAST of Chy2G042600 vs. TAIR 10
Match: AT3G50420.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 6.5e-27
Identity = 74/234 (31.62%), Postives = 117/234 (50.00%), Query Frame = 0


Query: 18  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKAC--CGLPKLGRQ 77
           +AV +N  ++  L  D     L FF+N    G+D    +FT  + L  C   G   LG+ 
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVD--PTQFTYSIVLNGCSKLGSYSLGKL 323

Query: 78  IHGFVISSGS-----------------GQLERAFSVFENLHDPDIVSWNTFLSGFEKS-- 137
           IH  +I S S                 G +  AF VF  +H+P++VSWN+ +SG  ++  
Sbjct: 324 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGF 383

Query: 138 --ENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGN 197
             +  L + R + +     D  T++ A+S   + + F+ G  LH    K G++  VFVG 
Sbjct: 384 GEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGT 443

Query: 198 ALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM 229
            L++MY +      A+KVFD M  RD VLW+ MI  +++ GN+ L A+  F++M
Sbjct: 444 TLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSEL-AVQFFIEM 494

[Close]

BLAST of Chy2G042600 vs. TAIR 10
Match: AT5G55740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22
Identity = 58/231 (25.11%), Postives = 117/231 (50.65%), Query Frame = 0


Query: 18  NAVFFNRALLNYLPRDGAFQSLRFFKNNFQWGLDGNADEFTLVLALKACCGLPKLGRQIH 77
           NAV +N  ++ Y+      +++R F +  + G++      +  L+  A  G  + G+Q H
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297

Query: 78  GFVISSGS-----------------GQLERAFSVFENLHDPDIVSWNTFLSGFEKS---E 137
              I +G                  G +E A  VF+ + + D+V+WN  +SG+ +    E
Sbjct: 298 AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVE 357

Query: 138 NALSFARRMNLKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLALKCGFKGDVFVGNALV 197
           +A+   + M L+ +++D VT  T +S     ++   G ++    ++  F+ D+ + + ++
Sbjct: 358 DAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVM 417

Query: 198 TMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQAILVFVQM 229
            MY++   +VDA+KVFD    +D +LW+ ++  YA+ G +G +A+ +F  M
Sbjct: 418 DMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG-EALRLFYGM 467

[Close]

BLAST of Chy2G042600 vs. TAIR 10
Match: AT2G39620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 3.7e-22
Identity = 65/187 (34.76%), Postives = 101/187 (54.01%), Query Frame = 0


Query: 59  LVLALKACCGLPKLGRQIHGFVISSG---SGQLERAFS----------VFENLHDPDIVS 118
           L+L L+ C     L  Q+HG +I SG     QL  A+S          +F+++ DP +V 
Sbjct: 8   LLLMLRECKNFRCL-LQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVL 67

Query: 119 WNTFLSGFEKS---ENALSFARRMN-LKGVEFDSVTYTTALSFRLDGKDFLFGWQLHTLA 178
           WN+ + G+ ++     AL F   M+  KG++ D  ++T AL       DF  G ++H L 
Sbjct: 68  WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 127

Query: 179 LKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDYAQEGNNGLQA 229
            + G + DV++G ALV MY +   LV AR+VFD+M  +D V W+ M++  AQ G +   A
Sbjct: 128 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSS-AA 187

[Close]

BLAST of Chy2G042600 vs. TAIR 10
Match: AT4G18520.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 3.7e-22
Identity = 60/184 (32.61%), Postives = 94/184 (51.09%), Query Frame = 0


Query: 54  ADEFTLVLALKAC--CGLPKLGRQIHGFVISSG-----------------SGQLERAFSV 113
           A+  T+V  L+AC   G   LG+++H  +I +                   G+   AF+V
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442

Query: 114 FENLHDPDIVSWNTFLSGFEK---SENALSFARRMNLKGVEFDSVTYTTALSFRLDGKDF 173
            + L   D+VSW   +SG         AL F + M  +GVE +  TY++AL    + +  
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502

Query: 174 LFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVLWSAMITDY 216
           L G  +H++A K     +VFVG+AL+ MY++   + +A +VFD MP ++ V W AMI  Y
Sbjct: 503 LIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGY 562

The following BLAST results are available for this feature:

BLAST of Chy2G042600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84MA3	1.2e-46	42.32	Pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Arabidop...	[more]
Q9SCT2	9.1e-26	31.62	Pentatricopeptide repeat-containing protein At3g50420 OS=Arabidopsis thaliana OX...	[more]
Q9FM64	1.8e-21	25.11	Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidop...	[more]
O80647	5.2e-21	34.76	Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana OX...	[more]
Q0WNP3	5.2e-21	32.61	Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidop...	[more]

BLAST of Chy2G042600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWF3	5.1e-112	84.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G320370 PE=4 SV=1	[more]
A0A5D3DTC6	1.1e-106	82.30	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7TTA5	9.3e-106	81.48	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BA52	9.3e-106	81.48	pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Cucumis ...	[more]
A0A6J1EK48	2.2e-99	75.31	pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Cucurbit...	[more]

BLAST of Chy2G042600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653086.1	4.14e-141	85.19	hypothetical protein Csa_019584 [Cucumis sativus]	[more]
XP_004150024.3	9.33e-138	85.19	pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucumis sa...	[more]
TYK26926.1	7.44e-129	82.30	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008444010.1	1.17e-127	81.48	PREDICTED: pentatricopeptide repeat-containing protein At4g32430, mitochondrial ...	[more]
XP_038878737.1	3.32e-124	77.37	pentatricopeptide repeat-containing protein At4g32430, mitochondrial isoform X2 ...	[more]

BLAST of Chy2G042600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32430.1	8.7e-48	42.32	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G50420.1	6.5e-27	31.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G55740.1	1.3e-22	25.11	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G39620.1	3.7e-22	34.76	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18520.1	3.7e-22	32.61	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 174..199 e-value: 0.02 score: 15.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 174..200 e-value: 0.0022 score: 16.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 149..229 e-value: 3.6E-10 score: 41.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 9..148 e-value: 4.3E-9 score: 38.2
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 8..229
None	No IPR available	PANTHER	PTHR24015:SF524	OS07G0670000 PROTEIN	coord: 8..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G042600.1	Chy2G042600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding