Chy2G042440 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G042440
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	zinc finger Ran-binding domain-containing protein 2-like
Location	chrH02: 23530304 .. 23531230 (+)
RNA-Seq Expression	Chy2G042440
Synteny	Chy2G042440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGGTCAGCAGGCGATTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCTAAGTATGGAGGTCCAGACCCATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTGGTGCATTTAAGTCCGTTTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGCATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATTTGCCCTAGGTACATACAGAACATTAATAAACTTAGAGTTGAAGTTGTTATTGTATGCTATGAAATTGCATAGTTCGTAATCATTAAAATCCTTTCTCATTGACAATCACTCTGAAACATTTTTGTAATCAATAAAAATCCATTTGGATAGTATAAAAGTCGAGTTTCCAAACGTGTAAACAATCCAACATTTAACTAAATTTTGAATGATTGTATGCATGTTTTTCCATATATTTACACCTCCACCATAATAAGAGAACTTCAAATTTCTGACTCAAAAGATCATACTGAAAACATACTATCAAGTTCGATAATTTTATTTAAATTCATACCATACTAGATATGCTAATTTAAAAGTTAATGTTATGCTGTACAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTAAGTTTATATCAATTAAAACTTCTCTGTTTATCTGCCCCTAAAAATTGGTTAGTAAAATTAACCGGTGGATGGGGTTTAATTTTTTTGTAGGTCACTTGGGTGTGTGATACAATTTTGGGTGCTCTATCTTTCAGGTGGTGCAGTGTAA

mRNA sequence

ATGAGTTGGTCAGCAGGCGATTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCTAAGTATGGAGGTCCAGACCCATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTGGTGCATTTAAGTCCGTTTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGCATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATTTGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTGGTGCAGTGTAA

Coding sequence (CDS)

ATGAGTTGGTCAGCAGGCGATTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCTAAGTATGGAGGTCCAGACCCATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTGGTGCATTTAAGTCCGTTTATCCTGGTGATTATGGCGCCTACATGATGGGTTCGGATCAGTATGCATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATTTGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTGGTGCAGTGTAA

Protein sequence

MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV*

Homology

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BLAST of Chy2G042440 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07
Identity = 34/130 (26.15%), Postives = 52/130 (40.00%), Query Frame = 0


Query: 6   GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYN-KTEALAGDWYCTTVSCGAHNY 65
           GDW C +C   NF++R +C RC +P       +T S     +   G+ Y    S    NY
Sbjct: 345 GDWNCPMCGFSNFQRRTSCFRCSFPGPTHVSAATGSNTFSPDFPYGNSYGNGSSHFIANY 404

Query: 66  ASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHNYASR 125
               +       +S      G   +     +        +++GDW C   GCG HN+A  
Sbjct: 405 GGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFGGNVPFRAGDWKCGSEGCGYHNFAKN 464

Query: 126 MECFKCKTPR 135
           + C +C   R
Sbjct: 465 VCCLRCGASR 474

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BLAST of Chy2G042440 vs. ExPASy Swiss-Prot
Match: Q5ZLX5 (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.9e-06
Identity = 33/89 (37.08%), Postives = 43/89 (48.31%), Query Frame = 0


Query: 50  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WK 109
           GDW C    CG  N+A R +C RCG  K+       A MM   G++   + A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 110 SGDWICPRMGCGVHNYASRMECFKCKTPR 135
           + DW C    CG  N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CGNVNWARRSECNMCNTPK 92

[Close]

BLAST of Chy2G042440 vs. ExPASy Swiss-Prot
Match: O95218 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-05
Identity = 32/89 (35.96%), Postives = 42/89 (47.19%), Query Frame = 0


Query: 50  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WK 109
           GDW C    CG  N+A R +C RCG  K+       A MM   G++   + A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 110 SGDWICPRMGCGVHNYASRMECFKCKTPR 135
           + DW C    C   N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Chy2G042440 vs. ExPASy Swiss-Prot
Match: Q9R020 (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-05
Identity = 32/89 (35.96%), Postives = 42/89 (47.19%), Query Frame = 0


Query: 50  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WK 109
           GDW C    CG  N+A R +C RCG  K+       A MM   G++   + A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 110 SGDWICPRMGCGVHNYASRMECFKCKTPR 135
           + DW C    C   N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Chy2G042440 vs. ExPASy Swiss-Prot
Match: Q19QU3 (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-05
Identity = 32/89 (35.96%), Postives = 42/89 (47.19%), Query Frame = 0


Query: 50  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM---GSDQYASDASIPPG-WK 109
           GDW C    CG  N+A R +C RCG  K+       A MM   G++   + A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 110 SGDWICPRMGCGVHNYASRMECFKCKTPR 135
           + DW C    C   N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Chy2G042440 vs. ExPASy TrEMBL
Match: A0A5D3E0T0 (Zinc finger Ran-binding domain-containing protein 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00450 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 6.5e-86
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

Query: 121 YASRMECFKCKTPRDFGGAV 141
           YASRMECFKCKTPRDFGGAV
Sbjct: 121 YASRMECFKCKTPRDFGGAV 140

[Close]

BLAST of Chy2G042440 vs. ExPASy TrEMBL
Match: A0A0A0LWE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306810 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 6.5e-86
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 130 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 189

Query: 121 YASRMECFKCKTPRDFGGAV 141
           YASRMECFKCKTPRDFGGAV
Sbjct: 190 YASRMECFKCKTPRDFGGAV 209

[Close]

BLAST of Chy2G042440 vs. ExPASy TrEMBL
Match: A0A1S3CMY6 (uncharacterized protein LOC103502740 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 6.5e-86
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 130 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 189

Query: 121 YASRMECFKCKTPRDFGGAV 141
           YASRMECFKCKTPRDFGGAV
Sbjct: 190 YASRMECFKCKTPRDFGGAV 209

[Close]

BLAST of Chy2G042440 vs. ExPASy TrEMBL
Match: A0A1S3CPF6 (uncharacterized protein LOC103502740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 3.6e-84
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 69  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 128

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 129 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 188

Query: 121 YASRMECFKCKTPRDFG 138
           YASRMECFKCKTPRDFG
Sbjct: 189 YASRMECFKCKTPRDFG 205

[Close]

BLAST of Chy2G042440 vs. ExPASy TrEMBL
Match: A0A1S3CNB1 (uncharacterized protein LOC103502740 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 3.6e-84
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 130 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 189

Query: 121 YASRMECFKCKTPRDFG 138
           YASRMECFKCKTPRDFG
Sbjct: 190 YASRMECFKCKTPRDFG 206

[Close]

BLAST of Chy2G042440 vs. NCBI nr
Match: XP_004150016.3 (zinc finger Ran-binding domain-containing protein 2 isoform X2 [Cucumis sativus] >KAA0046754.1 zinc finger Ran-binding domain-containing protein 2-like isoform X3 [Cucumis melo var. makuwa] >TYK29693.1 zinc finger Ran-binding domain-containing protein 2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 326 bits (835), Expect = 3.78e-113
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

Query: 121 YASRMECFKCKTPRDFGGAV 140
           YASRMECFKCKTPRDFGGAV
Sbjct: 121 YASRMECFKCKTPRDFGGAV 140

[Close]

BLAST of Chy2G042440 vs. NCBI nr
Match: XP_008465021.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo])

HSP 1 Score: 326 bits (835), Expect = 4.19e-112
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 130 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 189

Query: 121 YASRMECFKCKTPRDFGGAV 140
           YASRMECFKCKTPRDFGGAV
Sbjct: 190 YASRMECFKCKTPRDFGGAV 209

[Close]

BLAST of Chy2G042440 vs. NCBI nr
Match: XP_038880145.1 (zinc finger Ran-binding domain-containing protein 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 323 bits (828), Expect = 4.43e-112
Identity = 138/140 (98.57%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTT SCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTGSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

Query: 121 YASRMECFKCKTPRDFGGAV 140
           YASRMECFKCKTPRDFGGAV
Sbjct: 121 YASRMECFKCKTPRDFGGAV 140

[Close]

BLAST of Chy2G042440 vs. NCBI nr
Match: XP_011656267.2 (zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus] >XP_011656275.1 zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 320 bits (820), Expect = 7.61e-111
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

Query: 121 YASRMECFKCKTPRDFG 137
           YASRMECFKCKTPRDFG
Sbjct: 121 YASRMECFKCKTPRDFG 137

[Close]

BLAST of Chy2G042440 vs. NCBI nr
Match: XP_008465020.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo])

HSP 1 Score: 320 bits (820), Expect = 8.11e-110
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG
Sbjct: 69  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 128

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYASDASIPPGWKSGDWICPRMGCGVHN 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQY SDASIPPGWKSGDWICPRMGCGVHN
Sbjct: 129 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 188

Query: 121 YASRMECFKCKTPRDFG 137
           YASRMECFKCKTPRDFG
Sbjct: 189 YASRMECFKCKTPRDFG 205

[Close]

BLAST of Chy2G042440 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 219.2 bits (557), Expect = 2.2e-57
Identity = 90/140 (64.29%), Postives = 110/140 (78.57%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60
           MSW+ GDW+C  CQ+ NFKKRE+C +CGYPK+GG D STY YN+TE +AGDWYC  ++CG
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYASD-ASIPPGWKSGDWICPRMGCGV 120
           +HNYASR +C+RCG  K  Y    YGA M+    Y +D A+ PPGWK+GDW+CPR+GCGV
Sbjct: 61  SHNYASRTSCYRCGMIKVEYTEQYYGAQMVA---YGNDGAACPPGWKTGDWVCPRVGCGV 120

Query: 121 HNYASRMECFKCKTPRDFGG 139
           HNYASR ECFKCKT RD+GG
Sbjct: 121 HNYASRAECFKCKTTRDYGG 137

[Close]

BLAST of Chy2G042440 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 9.8e-34
Identity = 66/154 (42.86%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 6   GDWICNVCQNVNFKKREACHRCG-------------YPKYGGPDPSTYSYNK-TEALAGD 65
           GDW C  C ++NF++R++C RCG             +  +GG   S + +   ++   GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 66  WYCTTVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMGSDQYASD--ASIPPG----- 125
           WYCT  +CG HN+ASR  CF+CG FK     G  G  + G   + +D   S  PG     
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

Query: 126 -WKSGDWICPRMGCGVHNYASRMECFKCKTPRDF 137
            WKSGDWIC R+GC  HN+ASRMECF+C  PRDF
Sbjct: 125 SWKSGDWICTRIGCNEHNFASRMECFRCNAPRDF 158

[Close]

BLAST of Chy2G042440 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30
Identity = 58/159 (36.48%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 6   GDWICNVCQNVNFKKREACHRCGYPKYGG------------PDPSTYSYNK-TEALAGDW 65
           GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +   GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 66  YCTTVSCGAHNYASRPNCFRCGAFKSVYPGD----------------YGAYMMGSDQYAS 125
           YC    CG HN+A+R +CF+CGA K  +                    G +  G      
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

Query: 126 DASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD 136
             +    WKSGDWICPR GC  HN+ASR ECF+C  P++
Sbjct: 125 GGTGRSPWKSGDWICPRSGCNEHNFASRSECFRCNAPKE 163

[Close]

BLAST of Chy2G042440 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 53/149 (35.57%), Postives = 69/149 (46.31%), Query Frame = 0


Query: 6   GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYA 65
           GDW C  C+N N+  R  C+RC  P+    D +T   +K     GDW CT   C  +NYA
Sbjct: 7   GDWECLGCRNRNYAFRSFCNRCKQPRL-IMDNNTSPNSKWLPRIGDWICT--GCTNNNYA 66

Query: 66  SRPNCFRCGAFKSV-------YPG-----------------DYGAYMMGSDQYASDASIP 125
           SR  C +CG  K V        PG                 D    ++      + AS+ 
Sbjct: 67  SREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGSLLAFSNATNQASVH 126

Query: 126 PGWKSGDWICPRMGCGVHNYASRMECFKC 131
             W+SGDWIC    CG HNY+SR++C KC
Sbjct: 127 KEWRSGDWIC---RCGFHNYSSRIQCKKC 149

[Close]

BLAST of Chy2G042440 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.6e-04
Identity = 23/83 (27.71%), Postives = 34/83 (40.96%), Query Frame = 0


Query: 6   GDWICNVCQNVNFKKREACHRCG-YPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNY 65
           GDW C  C+ +NF K   C RC  + +           +      GDW C T  C   N+
Sbjct: 236 GDWYCTECKFLNFAKNIRCLRCDVFSEERLKQLKEEQKDHLPLKKGDWICQT--CNFLNF 295

Query: 66  ASRPNCFRC---GAFKSVYPGDY 85
           +    C RC      + + PG++
Sbjct: 296 SKNTRCLRCKDKPTLRQINPGEW 316

The following BLAST results are available for this feature:

BLAST of Chy2G042440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	2.6e-07	26.15	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]
Q5ZLX5	4.9e-06	37.08	Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=...	[more]
O95218	2.4e-05	35.96	Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z...	[more]
Q9R020	2.4e-05	35.96	Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=...	[more]
Q19QU3	2.4e-05	35.96	Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRA...	[more]

BLAST of Chy2G042440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0T0	6.5e-86	99.29	Zinc finger Ran-binding domain-containing protein 2-like isoform X3 OS=Cucumis m...	[more]
A0A0A0LWE1	6.5e-86	99.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306810 PE=4 SV=1	[more]
A0A1S3CMY6	6.5e-86	99.29	uncharacterized protein LOC103502740 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CPF6	3.6e-84	99.27	uncharacterized protein LOC103502740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CNB1	3.6e-84	99.27	uncharacterized protein LOC103502740 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Chy2G042440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150016.3	3.78e-113	99.29	zinc finger Ran-binding domain-containing protein 2 isoform X2 [Cucumis sativus]...	[more]
XP_008465021.2	4.19e-112	99.29	PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo]	[more]
XP_038880145.1	4.43e-112	98.57	zinc finger Ran-binding domain-containing protein 2-like isoform X2 [Benincasa h...	[more]
XP_011656267.2	7.61e-111	99.27	zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus]...	[more]
XP_008465020.2	8.11e-110	99.27	PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo]	[more]

BLAST of Chy2G042440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26695.1	2.2e-57	64.29	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	9.8e-34	42.86	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	1.3e-30	36.48	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	1.2e-18	35.57	zinc finger (Ran-binding) family protein	[more]
AT1G70650.1	3.6e-04	27.71	Ran BP2/NZF zinc finger-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 6..30 e-value: 3.3E-6 score: 36.6 coord: 50..76 e-value: 1.3E-4 score: 31.3 coord: 107..133 e-value: 2.7E-8 score: 43.6
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 49..77 e-value: 6.7E-7 score: 28.5 coord: 4..32 e-value: 2.7E-7 score: 29.8 coord: 105..134 e-value: 4.9E-9 score: 35.3
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 52..73
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 109..130
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 8..27
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 4..33 score: 9.235531
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 48..79 score: 9.145193
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 105..136 score: 10.138906
None	No IPR available	GENE3D	4.10.1060.10		coord: 40..79 e-value: 6.7E-11 score: 43.3 coord: 1..35 e-value: 2.0E-11 score: 45.0 coord: 99..136 e-value: 1.8E-13 score: 51.5
None	No IPR available	PANTHER	PTHR23111:SF41	ZINC FINGER, RANBP2-TYPE-RELATED	coord: 1..137
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 1..137
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 102..136
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 2..34
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 45..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G042440.1	Chy2G042440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding