Chy2G042080 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G042080
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH02: 22838732 .. 22840092 (-)
RNA-Seq Expression	Chy2G042080
Synteny	Chy2G042080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTGCAGCATCGGGGACCTTAATAGGAGACTCTTTACCAATTGACTGTTTGTTGGGCTTCTTGGGTCTCTTCCAATGGCGATCATCATTGTTGCTTTGACTGTCCTCAATACGTTTAGAAGGACGTTTGGCAGCTATCAATAAGCGGTTGTCCTTACCCACATTGTCAATACCACCTTTAATAGGAAGTTTAAATCGTGTAGAAGGAGATAAATTATCCACCAAGCATTTTGTCCATTCCTCAATTTTCTCCACAAGTCGTTCATCAGTTTCATTAGAGCATATATTTCGACTTCCACTACCAAAATTTATCTCACTTTTTTTTGTGGTTTTGGATTTGATCTGAGGGGGAGTAGGACGATCTATCAAATGTTGTACTCCTTCTTGAAGGTAATCACCATGTTTCGCAAGCCACCAGACCTTATAATGAGAAGTAATATGTGTGTCCGGGTTAAGGGCAGACGCAGGAAGATATACTTGGAAAAATGTGTTCTCGTGAATTCAAACCATCCAACAATATCGTACGTTGACAAAATCGGCTTCCGAAATTTTTTTTCCTAAGTCATATGGCACGTCTTGATAAAACCCAAATTGCCGCCTAAAGCGATAAGGACTATAAGGTTCAATAACTGAGGAGGATCCACATTGCGAGGATAGAAAACAAGAGCGAATGCTTATAAAAAATGAAGCATTCCAACTAATTAACTCTCCATCATCCGTTAAGAGTTCGTCTTTATTCTTTGACGGAAGACATGCATGCCATGACACATACTTTCCCTTGTGGATATGTGTTCGAGCCTCAAGATTAGTATAATATTTGGCCCCACCTTCACCAGAAAATTCAACCATGCGAGGACCCCTAAGACTCCTAGGGGCTTTATAATGAGTGTTGAAGTAAAGAGCAAGCCACCCATGGACATAGAAAAGTGGAAAACAGGCATTGGAATAACCAAGTGATGAAGTAGAATCATGAACCTAGCGTAGGCCACTATAAATATTAGCTAAAACAGGGATGGCAAGGCTAAATGTGTAGCCTTCCACCATGAGGCTAGCAACCTTAAAGACCTCCGGACGAAGGGAAAGTTGCTTGTCAAGGAACACAAACACACATAGCCAACAAGAGAGAAATGCCGCTAGATAGGTTTAGTCTCTATGATCATCAGTGACGCTTAAGTCAAGGAACACATTGAGTTCAGCTTCAGACCAGTCAGGGCGTTTGATGGGAATTCCATCTGGATTATGAGTTGAGCGAAGGCGAGAAGTTTTTTTTGGCTTCGAGGTGGCGGCTTCAAATACTTTACCTCAGATCATGTAACCCAGAAAGAGATCCATTCACTTACAGGAATTTGAGAGTGATCCAT

mRNA sequence

CTGTGCAGCATCGGGGACCTTAATAGGAGACTCTTTACCAATTGACTGTTTGTTGGGCTTCTTGGGTCTCTTCCAATGGCGATCATCATTGTTGCTTTGACTGTCCTCAATACGTTTAGAAGGACGTTTGGCAGCTATCAATAAGCGGTTGTCCTTACCCACATTGTCAATACCACCTTTAATAGGAAGTTTAAATCGTGTAGAAGGAGATAAATTATCCACCAAGCATTTTGTCCATTCCTCAATTTTCTCCACAAGTCGTTCATCAGTTTCATTAGAGCATATATTTCGACTTCCACTACCAAAATTTATCTCACTTTTTTTTGTGGTTTTGGATTTGATCTGAGGGGGAGTAGGACGATCTATCAAATGTTGTACTCCTTCTTGAAGGTAATCACCATGTTTCGCAAGCCACCAGACCTTATAATGAGAAGTAATATGTGTGTCCGGGTTAAGGGCAGACGCAGGAAGATATACTTGGAAAAATGTGTTCTCGTGAATTCAAACCATCCAACAATATCATTAGTATAATATTTGGCCCCACCTTCACCAGAAAATTCAACCATGCGAGGACCCCTAAGACTCCTAGGGGCTTTATAATGAGTGTTGAAGTAAAGAGCAAGCCACCCATGGACATAGAAAAGTGGAAAACAGGCATTGGAATAACCAAGTGATGAAGTAGAATCATGAACCTAGCGTAGGCCACTATAAATATTAGCTAAAACAGGGATGGCAAGGCTAAATGTGTAGCCTTCCACCATGAGGCTAGCAACCTTAAAGACCTCCGGACGAAGGGAAAGTTGCTTGTCAAGGAACACAAACACACATAGCCAACAAGAGAGAAATGCCGCTAGATAGGTTTAGTCTCTATGATCATCAGTGACGCTTAAGTCAAGGAACACATTGAGTTCAGCTTCAGACCAGTCAGGGCGTTTGATGGGAATTCCATCTGGATTATGAGTTGAGCGAAGGCGAGAAGTTTTTTTTGGCTTCGAGGTGGCGGCTTCAAATACTTTACCTCAGATCATGTAACCCAGAAAGAGATCCATTCACTTACAGGAATTTGAGAGTGATCCAT

Coding sequence (CDS)

CTGTGCAGCATCGGGGACCTTAATAGGAGACTCTTTACCAATTGACTGTTTGTTGGGCTTCTTGGGTCTCTTCCAATGGCGATCATCATTGTTGCTTTGACTGTCCTCAATACGTTTAGAAGGACGTTTGGCAGCTATCAATAAGCGGTTGTCCTTACCCACATTGTCAATACCACCTTTAATAGGAAGTTTAAATCGTGTAGAAGGAGATAAATTATCCACCAAGCATTTTGTCCATTCCTCAATTTTCTCCACAAGTCGTTCATCAGTTTCATTAGAGCATATATTTCGACTTCCACTACCAAAATTTATCTCACTTTTTTTTGTGGTTTTGGATTTGATCTGAGGGGGAGTAGGACGATCTATCAAATGTTGTACTCCTTCTTGAAGGTAATCACCATGTTTCGCAAGCCACCAGACCTTATAATGAGAAGTAATATGTGTGTCCGGGTTAAGGGCAGACGCAGGAAGATATACTTGGAAAAATGTGTTCTCGTGAATTCAAACCATCCAACAATATCATTAGTATAATATTTGGCCCCACCTTCACCAGAAAATTCAACCATGCGAGGACCCCTAAGACTCCTAGGGGCTTTATAATGAGTGTTGAAGTAAAGAGCAAGCCACCCATGGACATAGAAAAGTGGAAAACAGGCATTGGAATAACCAAGTGATGAAGTAGAATCATGAACCTAGCGTAGGCCACTATAAATATTAGCTAAAACAGGGATGGCAAGGCTAAATGTGTAGCCTTCCACCATGAGGCTAGCAACCTTAAAGACCTCCGGACGAAGGGAAAGTTGCTTGTCAAGGAACACAAACACACATAGCCAACAAGAGAGAAATGCCGCTAGATAGGTTTAGTCTCTATGATCATCAGTGACGCTTAAGTCAAGGAACACATTGAGTTCAGCTTCAGACCAGTCAGGGCGTTTGATGGGAATTCCATCTGGATTATGAGTTGAGCGAAGGCGAGAAGTTTTTTTTGGCTTCGAGGTGGCGGCTTCAAATACTTTACCTCAGATCATGTAACCCAGAAAGAGATCCATTCACTTACAGGAATTTGAGAGTGATCCAT

Protein sequence

LCSIGDLNRRLFTN*LFVGLLGSLPMAIIIVALTVLNTFRRTFGSYQ*AVVLTHIVNTTFNRKFKSCRRR*IIHQAFCPFLNFLHKSFISFIRAYISTSTTKIYLTFFCGFGFDLRGSRTIYQMLYSFLKVITMFRKPPDLIMRSNMCVRVKGRRRKIYLEKCVLVNSNHPTISLV*YLAPPSPENSTMRGPLRLLGAL**VLK*RASHPWT*KSGKQALE*PSDEVES*T*RRPL*ILAKTGMARLNV*PSTMRLATLKTSGRRESCLSRNTNTHSQQERNAAR*V*SL*SSVTLKSRNTLSSASDQSGRLMGIPSGL*VERRREVFFGFEVAASNTLPQIM*PRKRSIHLQEFESDPX

Homology

The following BLAST results are available for this feature:

BLAST of Chy2G042080 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G042080 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G042080 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G042080 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G042080.1	Chy2G042080.1	mRNA