Chy2G041710 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G041710
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Plant transposase
Location	chrH02: 22055342 .. 22055696 (+)
RNA-Seq Expression	Chy2G041710
Synteny	Chy2G041710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATTAGACTCACCTGCTGCTCGTACTAGATCAGCAATGTGTAAATTAACCATTGAAGAGGTTCAACCTAAGCAGGAGGAAAATGAAAATGTGGATTGTGAGGAAGTTCATACCAAGGAAGTAGGTCCTAAAAAGACAAGAGGTAGGACAAAGATGAAAACAATAGCGATGGAGCCTGAAATGAAAGTAAATGTAAGGTACAAAAAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTACACTGGTTAGAGAAGTGGTGCCAATGAATGTTGAAATTTGGAAGAAACTTTCTATTCGACAAAAAGAAATATTGTGGCATTCTATTCAAATAT

mRNA sequence

ATGTTATTAGACTCACCTGCTGCTCGTACTAGATCAGCAATGTGTAAATTAACCATTGAAGAGGTTCAACCTAAGCAGGAGGAAAATGAAAATGTGGATTGTGAGGAAGTTCATACCAAGGAAGTAGGTCCTAAAAAGACAAGAGGTAGGACAAAGATGAAAACAATAGCGATGGAGCCTGAAATGAAAGTAAATGTAAGGTACAAAAAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTACACTGGTTAGAGAAGTGGTGCCAATGAATGTTGAAATTTGGAAGAAACTTTCTATTCGACAAAAAGAAATATTGTGGCATTCTATTCAAATAT

Coding sequence (CDS)

ATGTTATTAGACTCACCTGCTGCTCGTACTAGATCAGCAATGTGTAAATTAACCATTGAAGAGGTTCAACCTAAGCAGGAGGAAAATGAAAATGTGGATTGTGAGGAAGTTCATACCAAGGAAGTAGGTCCTAAAAAGACAAGAGGTAGGACAAAGATGAAAACAATAGCGATGGAGCCTGAAATGAAAGTAAATGTAAGGTACAAAAAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTACACTGGTTAGAGAAGTGGTGCCAATGAATGTTGAAATTTGGAAGAAACTTTCTATTCGACAAAAAGAAATATTGTGGCATTCTATTCAAATAT

Protein sequence

MLLDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEMKVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQIX

Homology

[Close]

BLAST of Chy2G041710 vs. ExPASy TrEMBL
Match: A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44
Identity = 94/115 (81.74%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 3   LDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEM 62
           LDSPA RTRSA+ KL +EEV+ + EENENVDCEEVHTKE  PKKTRGRTKM+TIAMEPEM
Sbjct: 64  LDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEM 123

Query: 63  KVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQ 118
           K+++RY  YGQPIGETSVGLSSFLGTLVREVVP+NVE WKK+S RQKEILWHSIQ
Sbjct: 124 KLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of Chy2G041710 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44
Identity = 94/115 (81.74%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 3   LDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEM 62
           LDSPA RTRSA+ KL +EEV+ + EENENVDCEEVHTKE  PKKTRGRTKM+TIAMEPEM
Sbjct: 64  LDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEM 123

Query: 63  KVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQ 118
           K+++RY  YGQPIGETSVGLSSFLGTLVREVVP+NVE WKK+S RQKEILWHSIQ
Sbjct: 124 KLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of Chy2G041710 vs. ExPASy TrEMBL
Match: A0A5A7TIU1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002550 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43
Identity = 92/115 (80.00%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 3   LDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEM 62
           LDSPA  TRSA+ KL +EEV+ + EENENVDCEEVHTKE  PKKTRGRTKM+TIAMEPEM
Sbjct: 64  LDSPAGCTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEM 123

Query: 63  KVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQ 118
           K+++RY  YGQPIGETSVGLSSFLGTLVREVVP+N+E WKK+S RQKEILWHSIQ
Sbjct: 124 KLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNIETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of Chy2G041710 vs. ExPASy TrEMBL
Match: A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 92/115 (80.00%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 3   LDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEM 62
           LDSPA RTR  + KL +EEV+ + EENENVDCEEVHTKE  PKKTRGRTKM+TIAMEPEM
Sbjct: 64  LDSPAGRTRLVVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEM 123

Query: 63  KVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQ 118
           K+++RY  YGQPIGETSVGLSSFLGTLVREVVP+NVE WKK+S RQKEILWHSIQ
Sbjct: 124 KLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of Chy2G041710 vs. ExPASy TrEMBL
Match: A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.0e-43
Identity = 92/116 (79.31%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 3   LDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEM 62
           LDSPA RTRSA+ KL +EEV+ + EENENVDCEEVHTKE  PKKTRGRTKM+TIAMEPEM
Sbjct: 64  LDSPAGRTRSAVRKLLVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEM 123

Query: 63  KVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQI 119
           K+++RY  YGQPIGETSVGLSSFLGTL REVVP+NV  WKK+S RQKEILWHSIQ+
Sbjct: 124 KLDIRYNGYGQPIGETSVGLSSFLGTLFREVVPVNVATWKKISTRQKEILWHSIQM 179

[Close]

BLAST of Chy2G041710 vs. NCBI nr
Match: KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 184 bits (468), Expect = 9.70e-56
Identity = 92/115 (80.00%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 3   LDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEM 62
           LDSPA  TRSA+ KL +EEV+ + EENENVDCEEVHTKE  PKKTRGRTKM+TIAMEPEM
Sbjct: 64  LDSPAGCTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEM 123

Query: 63  KVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQ 117
           K+++RY  YGQPIGETSVGLSSFLGTLVREVVP+N+E WKK+S RQKEILWHSIQ
Sbjct: 124 KLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNIETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of Chy2G041710 vs. NCBI nr
Match: KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 188 bits (477), Expect = 6.55e-55
Identity = 94/115 (81.74%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 3   LDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEM 62
           LDSPA RTRSA+ KL +EEV+ + EENENVDCEEVHTKE  PKKTRGRTKM+TIAMEPEM
Sbjct: 64  LDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEM 123

Query: 63  KVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQ 117
           K+++RY  YGQPIGETSVGLSSFLGTLVREVVP+NVE WKK+S RQKEILWHSIQ
Sbjct: 124 KLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of Chy2G041710 vs. NCBI nr
Match: KAA0053956.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (462), Expect = 9.84e-55
Identity = 91/115 (79.13%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 3   LDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEM 62
           LDSPA RTRSA+ KL +E+V+ + EENENVDCEEVHTKE  PKKTRG  KM+TIAMEPEM
Sbjct: 64  LDSPAGRTRSAVRKLPVEKVESQLEENENVDCEEVHTKEPSPKKTRGHMKMQTIAMEPEM 123

Query: 63  KVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQ 117
           K+++RY  YGQPIGETSVGLSSFLGTLVREVVP+NVE WKK+S RQKEILWHSIQ
Sbjct: 124 KLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of Chy2G041710 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 188 bits (477), Expect = 1.29e-54
Identity = 94/115 (81.74%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 3   LDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEM 62
           LDSPA RTRSA+ KL +EEV+ + EENENVDCEEVHTKE  PKKTRGRTKM+TIAMEPEM
Sbjct: 64  LDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEM 123

Query: 63  KVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQ 117
           K+++RY  YGQPIGETSVGLSSFLGTLVREVVP+NVE WKK+S RQKEILWHSIQ
Sbjct: 124 KLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of Chy2G041710 vs. NCBI nr
Match: KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 184 bits (467), Expect = 5.55e-54
Identity = 92/116 (79.31%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 3   LDSPAARTRSAMCKLTIEEVQPKQEENENVDCEEVHTKEVGPKKTRGRTKMKTIAMEPEM 62
           LDSPA RTRSA+ KL +EEV+ + EENENVDCEEVHTKE  PKKTRGRTKM+TIAMEPEM
Sbjct: 64  LDSPAGRTRSAVRKLLVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEM 123

Query: 63  KVNVRYKKYGQPIGETSVGLSSFLGTLVREVVPMNVEIWKKLSIRQKEILWHSIQI 118
           K+++RY  YGQPIGETSVGLSSFLGTL REVVP+NV  WKK+S RQKEILWHSIQ+
Sbjct: 124 KLDIRYNGYGQPIGETSVGLSSFLGTLFREVVPVNVATWKKISTRQKEILWHSIQM 179

The following BLAST results are available for this feature:

BLAST of Chy2G041710 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G041710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBP2	1.1e-44	81.74	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0...	[more]
A0A5A7SRN7	1.1e-44	81.74	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00...	[more]
A0A5A7TIU1	1.2e-43	80.00	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00...	[more]
A0A5A7TLJ2	1.5e-43	80.00	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003...	[more]
A0A5A7UNU1	2.0e-43	79.31	Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Chy2G041710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041269.1	9.70e-56	80.00	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0051001.1	6.55e-55	81.74	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0053956.1	9.84e-55	79.13	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0032201.1	1.29e-54	81.74	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0056267.1	5.55e-54	79.31	uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa]	[more]

BLAST of Chy2G041710 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..51
None	No IPR available	PANTHER	PTHR33144:SF27	SUBFAMILY NOT NAMED	coord: 23..117
None	No IPR available	PANTHER	PTHR33144	OS10G0409366 PROTEIN-RELATED	coord: 23..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G041710.1	Chy2G041710.1	mRNA