Chy2G040670 (gene) Cucumber (hystrix) v1

Overview
NameChy2G040670
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionrubisco accumulation factor 1, chloroplastic
LocationchrH02: 19753835 .. 19755199 (-)
RNA-Seq ExpressionChy2G040670
SyntenyChy2G040670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTCCTCCACCATCACCAACGCCAACTCTCTCAGTTATCTCTCCTCCATTGCCCACACCACCTCCATCTTCCTCCATCAACCCATAGACTCCCCTCTCCGCCTCTTCCTCCGTCGCCGTCTAAACCCCATTTCCGCCATTATTAACCCTTCCCCTTCCTCCTTAGCCGCAAAGCAACAAGTGTACCAACCATTCCGCCCCCCTCCCTCTCCTCTTCCCCCTCAATACCGCTCCCTCGACACCGAAGGCAAGCTCAATATCCTCTCCAACCGCCTCGGCCTCTGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGCTTCAAGAGGGCTTCACTCCTCCCATTTTAGAAGAAATCACCGGAATTAGCGGTGTTCAGCAGAATATCTTCATCGTTGGCGCTCAGGTTCGCGAATCCCTAGTTCAGTCCAATGACTCCGATCCAGATGTAGTCGCCTCCTTCGATACTGGTGGTGCGGAGTTGCTCTATGAAATTCGGCTTCTAAGTACTGAGAAACGCGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCTCAGGATCTGGCTCGAGCGATGAAGGATTTTCCTCGACGAAAAGGGGACAAAGGTTGGGAGTATTTTGATTACGATTCTGCTGGGGATTGTTTGGCGTATATGTATTACAGGTTGAGTAGAGAGTACAATAGTTCATCGGAGCGGAGGACGGCGGCGTTGGAGGAGGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATCTGATTGTTGGGGATTTGGAGGGGAAAGGAGATGGGAAGGACGGGGTTGAAGAGGAAATTGGAGCGGGAGTTAGGGTTCCGGTGGTGCGGATGAAGATTGGGGAGGTTGCGGAGGCGACGACAGTGGTGGTGATGCCGGTGTGCAAGGCTGGGGAAGGGGAAAAGGGAGTTGGAGAGGCGCCAATGGAGATGAGAAGCGAGGGAGAATTCGGGGTTGTGGTGGCGGAAAAGGGGTGGAGCAGGTGGGTGGTGCTGCCGGGATGGGAGCCGGTGGCGGGGTTGGTGAAGGGCGGTGGCGTAGTAGTGGCGTTTAAGGATGCGAGGGTTCTGCCTTGGCGAGTGAACAGGTGGTACAAGGAGGAGCCAATTCTGGTAGTGGCTGATCGGAGAAGAAAGGAGGTGGTGGCGGGAGATGGATTTTATCTGATGGGTGGAACTGTGGGGGGAGGCGATGGAGGTGGGGATTTGAAGGTGGAGAGAGGGAATGCATTGATGGAAATGGGAGTGAAGGAGAGCTTAGGAACAGTATTGTTGGTGGTTAGGCCACCAAGGGAGATGGAAGATGATGAATTGAGTGATGAAGATTGGGATTAA

mRNA sequence

ATGCTTTCCTCCACCATCACCAACGCCAACTCTCTCAGTTATCTCTCCTCCATTGCCCACACCACCTCCATCTTCCTCCATCAACCCATAGACTCCCCTCTCCGCCTCTTCCTCCGTCGCCGTCTAAACCCCATTTCCGCCATTATTAACCCTTCCCCTTCCTCCTTAGCCGCAAAGCAACAAGTGTACCAACCATTCCGCCCCCCTCCCTCTCCTCTTCCCCCTCAATACCGCTCCCTCGACACCGAAGGCAAGCTCAATATCCTCTCCAACCGCCTCGGCCTCTGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGCTTCAAGAGGGCTTCACTCCTCCCATTTTAGAAGAAATCACCGGAATTAGCGGTGTTCAGCAGAATATCTTCATCGTTGGCGCTCAGGTTCGCGAATCCCTAGTTCAGTCCAATGACTCCGATCCAGATGTAGTCGCCTCCTTCGATACTGGTGGTGCGGAGTTGCTCTATGAAATTCGGCTTCTAAGTACTGAGAAACGCGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCTCAGGATCTGGCTCGAGCGATGAAGGATTTTCCTCGACGAAAAGGGGACAAAGGTTGGGAGTATTTTGATTACGATTCTGCTGGGGATTGTTTGGCGTATATGTATTACAGGTTGAGTAGAGAGTACAATAGTTCATCGGAGCGGAGGACGGCGGCGTTGGAGGAGGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATCTGATTGTTGGGGATTTGGAGGGGAAAGGAGATGGGAAGGACGGGGTTGAAGAGGAAATTGGAGCGGGAGTTAGGGTTCCGGTGGTGCGGATGAAGATTGGGGAGGTTGCGGAGGCGACGACAGTGGTGGTGATGCCGGTGTGCAAGGCTGGGGAAGGGGAAAAGGGAGTTGGAGAGGCGCCAATGGAGATGAGAAGCGAGGGAGAATTCGGGGTTGTGGTGGCGGAAAAGGGGTGGAGCAGGTGGGTGGTGCTGCCGGGATGGGAGCCGGTGGCGGGGTTGGTGAAGGGCGGTGGCGTAGTAGTGGCGTTTAAGGATGCGAGGGTTCTGCCTTGGCGAGTGAACAGGTGGTACAAGGAGGAGCCAATTCTGGTAGTGGCTGATCGGAGAAGAAAGGAGGTGGTGGCGGGAGATGGATTTTATCTGATGGGTGGAACTGTGGGGGGAGGCGATGGAGGTGGGGATTTGAAGGTGGAGAGAGGGAATGCATTGATGGAAATGGGAGTGAAGGAGAGCTTAGGAACAGTATTGTTGGTGGTTAGGCCACCAAGGGAGATGGAAGATGATGAATTGAGTGATGAAGATTGGGATTAA

Coding sequence (CDS)

ATGCTTTCCTCCACCATCACCAACGCCAACTCTCTCAGTTATCTCTCCTCCATTGCCCACACCACCTCCATCTTCCTCCATCAACCCATAGACTCCCCTCTCCGCCTCTTCCTCCGTCGCCGTCTAAACCCCATTTCCGCCATTATTAACCCTTCCCCTTCCTCCTTAGCCGCAAAGCAACAAGTGTACCAACCATTCCGCCCCCCTCCCTCTCCTCTTCCCCCTCAATACCGCTCCCTCGACACCGAAGGCAAGCTCAATATCCTCTCCAACCGCCTCGGCCTCTGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGCTTCAAGAGGGCTTCACTCCTCCCATTTTAGAAGAAATCACCGGAATTAGCGGTGTTCAGCAGAATATCTTCATCGTTGGCGCTCAGGTTCGCGAATCCCTAGTTCAGTCCAATGACTCCGATCCAGATGTAGTCGCCTCCTTCGATACTGGTGGTGCGGAGTTGCTCTATGAAATTCGGCTTCTAAGTACTGAGAAACGCGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATAGCAAAGGCGCTCAGGATCTGGCTCGAGCGATGAAGGATTTTCCTCGACGAAAAGGGGACAAAGGTTGGGAGTATTTTGATTACGATTCTGCTGGGGATTGTTTGGCGTATATGTATTACAGGTTGAGTAGAGAGTACAATAGTTCATCGGAGCGGAGGACGGCGGCGTTGGAGGAGGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATCTGATTGTTGGGGATTTGGAGGGGAAAGGAGATGGGAAGGACGGGGTTGAAGAGGAAATTGGAGCGGGAGTTAGGGTTCCGGTGGTGCGGATGAAGATTGGGGAGGTTGCGGAGGCGACGACAGTGGTGGTGATGCCGGTGTGCAAGGCTGGGGAAGGGGAAAAGGGAGTTGGAGAGGCGCCAATGGAGATGAGAAGCGAGGGAGAATTCGGGGTTGTGGTGGCGGAAAAGGGGTGGAGCAGGTGGGTGGTGCTGCCGGGATGGGAGCCGGTGGCGGGGTTGGTGAAGGGCGGTGGCGTAGTAGTGGCGTTTAAGGATGCGAGGGTTCTGCCTTGGCGAGTGAACAGGTGGTACAAGGAGGAGCCAATTCTGGTAGTGGCTGATCGGAGAAGAAAGGAGGTGGTGGCGGGAGATGGATTTTATCTGATGGGTGGAACTGTGGGGGGAGGCGATGGAGGTGGGGATTTGAAGGTGGAGAGAGGGAATGCATTGATGGAAATGGGAGTGAAGGAGAGCTTAGGAACAGTATTGTTGGTGGTTAGGCCACCAAGGGAGATGGAAGATGATGAATTGAGTGATGAAGATTGGGATTAA

Protein sequence

MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPISAIINPSPSSLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEITGISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRTAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNALMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD*
Homology
BLAST of Chy2G040670 vs. ExPASy Swiss-Prot
Match: Q9LKR8 (Rubisco accumulation factor 1.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAF1.1 PE=1 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.8e-124
Identity = 255/457 (55.80%), Postives = 325/457 (71.12%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPI-SAIINPSPSSLAAK 60
           MLS T T  +S  +  S  H    F  +P+        R+    I SA+I  S      K
Sbjct: 1   MLSLTATTLSSSIFTQSKTH--GFFNTRPV-------YRKPFTTITSALIPASNRQAPPK 60

Query: 61  QQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEI 120
           QQ+YQPFRPPPSP+PP++RSLDT GK+ +L++RLGLWFEYAPLISSL  EGFTPP +EE+
Sbjct: 61  QQLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEEL 120

Query: 121 TGISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKY 180
           TGISGV+QN  IVGAQVR+SLVQS  + P+++A+FDT GAELLYEIRLL+T +R AAA+Y
Sbjct: 121 TGISGVEQNSLIVGAQVRDSLVQSG-AKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEY 180

Query: 181 IVENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERR 240
           IV++  D+KGA DLARA+KDFP R+GD G   FDY+  GDCL++M YR SRE+ S SE R
Sbjct: 181 IVDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIR 240

Query: 241 TAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTV 300
           T  LE+AL+  VTEKA+  ++ +L G+ + +   EEEI   +RVPVVR++ GEVA A++V
Sbjct: 241 TTLLEQALETAVTEKAKKAVLRELHGESEEERVKEEEIKI-IRVPVVRLRFGEVAGASSV 300

Query: 301 VVMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVV 360
           VV+PVCKA EGE+ + EAPME  S GEFGVV AEK WSRWVVLPGW+PV  + K  GV V
Sbjct: 301 VVLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVAV 360

Query: 361 AFKDAR-VLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERG 420
           +F D R VLPW      K E I+VV DR +K V A +G+Y +    GG      +K++RG
Sbjct: 361 SFSDDREVLPWN----GKGEAIMVVIDREKKTVEADNGYYYLVVADGG------MKLDRG 420

Query: 421 NALMEMGVKESLGTVLLVVRPPREMEDD-ELSDEDWD 455
             L E GV ESLG V+LVVRPPR+ +D+ +++DEDWD
Sbjct: 421 LVLKEKGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434

BLAST of Chy2G040670 vs. ExPASy Swiss-Prot
Match: Q9SR19 (Rubisco accumulation factor 1.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAF1.2 PE=1 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.5e-120
Identity = 236/432 (54.63%), Postives = 312/432 (72.22%), Query Frame = 0

Query: 29  PIDSPLRLFLRRRLNPISAIINPSPSSLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNI 88
           P+   +   +   + P  +  N  P +  A+QQ+YQPFRPP SP+P Q+RSLD+ GK+ I
Sbjct: 31  PLPRTVSFTVTASMIPKRSSANMIPKNPPARQQLYQPFRPPSSPIPTQFRSLDSAGKIEI 90

Query: 89  LSNRLGLWFEYAPLISSLLQEGFTPPILEEITGISGVQQNIFIVGAQVRESLVQSNDSDP 148
           L+ R+ LWFEYAPLISSL  +GFTPP +EE+TGIS ++QN  IVGAQVR+S++QS   +P
Sbjct: 91  LAGRMALWFEYAPLISSLYTDGFTPPTIEELTGISSIEQNRLIVGAQVRDSILQS-IHEP 150

Query: 149 DVVASFDTGGAELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRKGDKG 208
           +++++FDTGGAELLYEIRLLST +R AAA +I++  +DSKGAQDLARA+KD+P R+GD G
Sbjct: 151 ELISAFDTGGAELLYEIRLLSTTQRVAAATFIIDRNIDSKGAQDLARAIKDYPNRRGDVG 210

Query: 209 WEYFDYDSAGDCLAYMYYRLSREYNSSSERRTAALEEALKVVVTEKARDL----IVGDLE 268
           W  FDY+  GDCL+++YYR SRE  + S++RT+ L +AL V  +EKA++     + GD E
Sbjct: 211 WLDFDYNLPGDCLSFLYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKE 270

Query: 269 GKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEMRSE 328
            + + +   +EE    +R+PVVR+K GEVAEAT+VVV+PVCKA EGEK + EAPME+ + 
Sbjct: 271 AEKEKEKKKKEEEVKAIRIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAG 330

Query: 329 GEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKDAR-VLPWRVNRWYKEEPILVV 388
           G+F VV AEKGW RWVVLP W PVA + K GGV V+F+D R VLPW      KEEP+LVV
Sbjct: 331 GDFKVVEAEKGWKRWVVLPSWNPVAAIGK-GGVAVSFRDDRKVLPWD----GKEEPLLVV 390

Query: 389 ADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNALMEMGVKESLGTVLLVVRPPREM 448
           ADR R  V A DG+YL+    G       LK+E+G+ L    VKESLG V+LVVRPPRE 
Sbjct: 391 ADRVRNVVEADDGYYLVVAENG-------LKLEKGSDLKAREVKESLGMVVLVVRPPRED 449

Query: 449 EDD-ELSDEDWD 455
           +DD + S ++WD
Sbjct: 451 DDDWQTSHQNWD 449

BLAST of Chy2G040670 vs. ExPASy Swiss-Prot
Match: Q7XDY9 (Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RAF1 PE=2 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.0e-93
Identity = 198/415 (47.71%), Postives = 269/415 (64.82%), Query Frame = 0

Query: 52  SPSSLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGF 111
           +P   A   Q+YQPF PPPSPLP +Y+ LD   +L +L +RLGLW EYAPLIS+L +EGF
Sbjct: 69  TPPPTAPPDQLYQPFHPPPSPLPDKYKDLDLGQRLAVLRDRLGLWHEYAPLISALSREGF 128

Query: 112 TPPILEEITGISGVQQNIFIVGAQVRESLVQSNDSDP-DVVASFDT-GGAELLYEIRLLS 171
           TP  +EE TGISGV+QN  +V  QVR+SLV      P +++  FD+ GG ELLYE+R L+
Sbjct: 129 TPSSIEEATGISGVEQNSVVVATQVRDSLVADEGGFPAELLRYFDSYGGPELLYELRFLN 188

Query: 172 TEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLS 231
             +RA AA++ ++ RL+ +G ++LAR+MKDFP+R+GD GWE F  D+ GDCLA+  +R S
Sbjct: 189 ARQRADAARHAIDRRLEPRGVRELARSMKDFPQRRGDDGWEAFTRDNPGDCLAFARFRQS 248

Query: 232 REYNSSSERRTAALEEALKVVVTEKARDLIVGDLE--------GKGDGKDGVEEEIGAGV 291
           RE    +E   A LE AL+VV TE AR  +  +L+         + D +DG      A  
Sbjct: 249 RE-AIDAEDSVAELERALEVVDTEPARARVEAELDRARRKAAGEEVDDEDGAANAAAAAS 308

Query: 292 R--VPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRW 351
           R  VPVVR+  GEVAEATTV+++PV + G+G + +  AP   R++ + G+V  +KGW+RW
Sbjct: 309 RPAVPVVRLMYGEVAEATTVLLLPVVREGDGGEALAHAPRRTRTDADLGMVEVDKGWTRW 368

Query: 352 VVLPGWEPVAGLVKGGGVVVAFKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYL 411
            V+PGW PVA  V G  VV+   D R LPWR     + E +LVVA+R R+EVV  DG Y+
Sbjct: 369 AVVPGWGPVAE-VAGEAVVIELADGRTLPWRS---AEAERVLVVANRGRREVVE-DGIYV 428

Query: 412 MGGTVGGGDGGGDLKVERGNALMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 455
           +       +  G L VE+G  L   GV E+   VL+VVRPPR+ EDD +SD++WD
Sbjct: 429 V-------EREGRLVVEKGRKLAAEGVGEAAAEVLVVVRPPRD-EDDMISDDEWD 469

BLAST of Chy2G040670 vs. ExPASy Swiss-Prot
Match: B4FR29 (Rubisco accumulation factor 1, chloroplastic OS=Zea mays OX=4577 GN=RAF1 PE=1 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 4.0e-89
Identity = 192/416 (46.15%), Postives = 268/416 (64.42%), Query Frame = 0

Query: 52  SPSSLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGF 111
           +P  +A   Q+YQPF PPPSPLPP  R+LD   +L IL +R+GLW EYAPLISSL ++GF
Sbjct: 62  TPPPMAPPGQLYQPFHPPPSPLPPSLRNLDLSERLQILRDRMGLWHEYAPLISSLSRDGF 121

Query: 112 TPPILEEITGISGVQQNIFIVGAQVRESLVQSNDS--DPDVVASFDT-GGAELLYEIRLL 171
            P  ++E TGISGV+QN  +V +QVR+SL+    +   PD++  FD+ GG E+LYE+R L
Sbjct: 122 NPSSIQEATGISGVEQNCLVVASQVRDSLLDDRAAAFPPDLLPYFDSLGGPEVLYELRFL 181

Query: 172 STEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRL 231
           +  +RA AA++ +  RL+ KG ++LARAMK FPR +G++GWE F  DS  DCLA+  +R 
Sbjct: 182 NARQRADAARHAIGYRLEPKGVRELARAMKGFPRWRGEEGWEAFSKDSPADCLAFARFRQ 241

Query: 232 SREYNSSSERRTAALEEALKVVVTEKARDLIVGDLE---GKGDGKDGVEEE-----IGAG 291
           SRE     + R A LE AL+VV TE  R  +  +LE    K  G++ V+EE       A 
Sbjct: 242 SREAIDVQD-RVAELERALQVVETESGRARVELELERARRKAAGEEEVDEEGEEDDAAAS 301

Query: 292 VR--VPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSR 351
           +R  V VVR++ GEVAEATTV+++PV +  +G   +  AP   +++   GVV  ++ W+R
Sbjct: 302 LRPGVTVVRLRYGEVAEATTVILLPVVRETDGVAAMESAPRRAKTDVGLGVVEVDRAWAR 361

Query: 352 WVVLPGWEPVAGLVKGGGVVVAFKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFY 411
           W V+PGW PVA       VVV   D R LPWR++    EEP+LV+A+R +KEVV  +G Y
Sbjct: 362 WAVVPGWGPVAE-AADDAVVVELADGRRLPWRMS---DEEPVLVIANRSKKEVVE-EGVY 421

Query: 412 LMGGTVGGGDGGGDLKVERGNALMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 455
           ++       +  G L VERG  L E G+  +   V++VVRPP++ EDD +SDE+WD
Sbjct: 422 VL-------EREGRLVVERGKKLAEQGIAAAAAEVVIVVRPPKD-EDDMVSDEEWD 463

BLAST of Chy2G040670 vs. ExPASy Swiss-Prot
Match: Q8YLP6 (RuBisCO accumulation factor 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=raf1 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.2e-22
Identity = 114/392 (29.08%), Postives = 182/392 (46.43%), Query Frame = 0

Query: 68  PPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEITGISGVQQ 127
           PP +P P    +   +  L  L  + G W E+   I+SL + G+ P  + E TG   VQQ
Sbjct: 5   PPNAPNPENATNELAQELLRKLRQKQGNWVEWGQAIASLQKSGYNPQDIFEATGFEPVQQ 64

Query: 128 NIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYIVENRLDS 187
           N  IVG+QV  SL +S  S    +A + T G+++LYE+RLL+ E+RAAA      +++D+
Sbjct: 65  NQVIVGSQVYNSLEKSGAS-AATLAHYATRGSDVLYELRLLTHEERAAAGDLTFTHKVDA 124

Query: 188 KGAQDLARAMKDFPR-RKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRTAALEEA 247
             A+++A+A+KDF R R   +G+     +  GD +AY  ++L+R+Y S  + R+  +   
Sbjct: 125 DEAREIAKAIKDFSRFRILPEGFS----NHPGDAVAYQAWKLARQY-SDLQERSRLIARG 184

Query: 248 LKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVVVMPVCK 307
           L+   +E AR  I   L       D            P  R    +       VV  +  
Sbjct: 185 LRFAHSETARKQIEQLL------VDFTVVSQRPAPIPPFFRFDTEDELPRIVPVVGQLPL 244

Query: 308 AGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKDARV 367
             E  K V      +  E E   +V   G   WV LPGW+          V++A +D   
Sbjct: 245 KAEELKAV-----PLVEEIEPFRLVKFSGEQAWVALPGWQ----------VLLAAEDPVT 304

Query: 368 LPWRVNRWYKEE-----PILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNAL 427
           +    +R+ K+      P+LVV DR ++E    D  Y +       D  G+L  +     
Sbjct: 305 ILATSDRFPKQNQTEPGPVLVVVDRSQRE--WNDFSYFV------VDHDGELDFQWFETK 357

Query: 428 MEMGVKESLGTVLLVVRPPREMEDDELSDEDW 454
            E  +   LG V+++VR PR + D+ ++ + W
Sbjct: 365 PEFPI---LGKVIILVR-PRRILDENVTKDSW 357

BLAST of Chy2G040670 vs. ExPASy TrEMBL
Match: A0A0A0LY43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690280 PE=4 SV=1)

HSP 1 Score: 842.0 bits (2174), Expect = 1.1e-240
Identity = 432/454 (95.15%), Postives = 442/454 (97.36%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPISAIINPSPSSLAAKQ 60
           MLSSTITNANSLS LSSIAHTTSIFLHQP DSPLRLFLRRRLNPISAIINPS SSLAAKQ
Sbjct: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPP+LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120

Query: 121 GISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN FIVGAQVRESL+QSNDSDPDV+ASFDTGGAELLYEIRLLSTEKRAAAAKYI
Sbjct: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRT 240
           VENRLDSKGAQDLARAMKDFPRR+GDKGWEYFDYD AGDCLAYMYYRLSREYNSS+ERRT
Sbjct: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGA V+VPVVRMKIGEVAEATTVV
Sbjct: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPME+RSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNA 420
           F+DARVLPWRVNRWYKEEPILVVADR R+EVVAGDGFYLM    GGGDGGGDLKVERGNA
Sbjct: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLM----GGGDGGGDLKVERGNA 420

Query: 421 LMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 455
           LMEMGVKESLGTVLLVVRPPRE EDD+LSDEDWD
Sbjct: 421 LMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 450

BLAST of Chy2G040670 vs. ExPASy TrEMBL
Match: A0A5D3DZE4 (Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001420 PE=4 SV=1)

HSP 1 Score: 837.8 bits (2163), Expect = 2.2e-239
Identity = 425/454 (93.61%), Postives = 441/454 (97.14%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPISAIINPSPSSLAAKQ 60
           MLSSTITNANSL+ LSSIAHTT+IFLHQPIDSPLRLFLRRR NPISAIINPSPS LAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLN+LSNRLGLWFEYAPLISSLLQEGFTPP LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN F+VGAQVRESLVQSNDSDPDV+ASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRT 240
           VENRLDSKGAQDLARA+KDFPRRKGD+GWE FDYDSAGDCLAYMYYRLSREYN+SSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKAR+LIVGDLE KGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPME+RSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNA 420
           FKDARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGG+LKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 455
           L EMGVKESLGTV+LVVRPP+EMEDD+LSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of Chy2G040670 vs. ExPASy TrEMBL
Match: A0A1S3CHL8 (rubisco accumulation factor 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501013 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 4.8e-239
Identity = 424/454 (93.39%), Postives = 441/454 (97.14%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPISAIINPSPSSLAAKQ 60
           MLSSTITNANSL+ LSSIAHTT+IFLHQPIDSPLRLFLRRR NPISAIINPSPS LAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLN+LSNRLGLWF+YAPLISSLLQEGFTPP LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN F+VGAQVRESLVQSNDSDPDV+ASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRT 240
           VENRLDSKGAQDLARA+KDFPRRKGD+GWE FDYDSAGDCLAYMYYRLSREYN+SSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKAR+LIVGDLE KGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPME+RSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNA 420
           FKDARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGG+LKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 455
           L EMGVKESLGTV+LVVRPP+EMEDD+LSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of Chy2G040670 vs. ExPASy TrEMBL
Match: A0A5A7VA63 (Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00440 PE=4 SV=1)

HSP 1 Score: 835.1 bits (2156), Expect = 1.4e-238
Identity = 424/454 (93.39%), Postives = 440/454 (96.92%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPISAIINPSPSSLAAKQ 60
           MLSSTITNANSL+ LSSIAHTT+IFLHQPIDSPLRLFLRRR NPISAIINPSPS LAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLN+LSNRLGLWFEYAPLISSLLQEGFTPP LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN F+VGAQVRESLVQSNDSDPDV+ASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRT 240
           VENRLDSKGAQDLARA+KDFPRRKGD+GWE FDYDSAGDCLAYMYYRLSREYN+SSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKV VTEKAR+LIVGDLE KGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVGVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPME+RSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNA 420
           FKDARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGG+LKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 455
           L EMGVKESLGTV+LVVRPP+EMEDD+LSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of Chy2G040670 vs. ExPASy TrEMBL
Match: A0A6J1F451 (rubisco accumulation factor 1.1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439956 PE=4 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 3.0e-188
Identity = 354/458 (77.29%), Postives = 396/458 (86.46%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIF-LHQPIDSPLRLFLRRRLNPISAIIN--PSPSSLA 60
           MLS+T   A + S  ++ AHTT+ F LH P   PLRLFLRR  NPISA +N  PSPS L 
Sbjct: 1   MLSAT---APATSLSAAAAHTTTTFLLHTP---PLRLFLRRPPNPISASLNPSPSPSPLV 60

Query: 61  AKQQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILE 120
           AK QVYQPFRPPPSPLP QYRSLD  GKL++L+NRLGLWFEYAPLISSL+QEGFTPP +E
Sbjct: 61  AKPQVYQPFRPPPSPLPSQYRSLDAAGKLDVLANRLGLWFEYAPLISSLIQEGFTPPTIE 120

Query: 121 EITGISGVQQNIFIVGAQVRESLVQS-NDSDPDVVASFDTGGAELLYEIRLLSTEKRAAA 180
           EITGI GVQQN  +VGAQVRESLVQ+ ND+DPD++A+FDTGGAELLYEIRLL+ EKRAAA
Sbjct: 121 EITGIGGVQQNTLVVGAQVRESLVQTINDADPDLIAAFDTGGAELLYEIRLLNAEKRAAA 180

Query: 181 AKYIVENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSS 240
           A+YIVENRLD KGAQDLARAMKDFPRR+GDKGWE F+YD  GDCLA+M+YRLSREY++ S
Sbjct: 181 ARYIVENRLDGKGAQDLARAMKDFPRRRGDKGWESFNYDYPGDCLAFMHYRLSREYSNMS 240

Query: 241 ERRTAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEA 300
           E RTAALE+ALKV VTE+AR LIV DLE +G+GKD VEEEI AGVRVPVVR+KIGEVAEA
Sbjct: 241 EARTAALEDALKVAVTEEARSLIVRDLEREGEGKDEVEEEIEAGVRVPVVRLKIGEVAEA 300

Query: 301 TTVVVMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGG 360
           TTVVV+PVC   EG KGVGEAPME+RSEGEFGVVVAE+GW RWVVLPGWEP+AGL K GG
Sbjct: 301 TTVVVLPVCNGEEGGKGVGEAPMEVRSEGEFGVVVAEEGWRRWVVLPGWEPIAGLGK-GG 360

Query: 361 VVVAFKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVE 420
           VVVAFKDAR LPWRVNRWYKEE ILVVADR RKEV AGDGFYL G T  G D  G+LKV+
Sbjct: 361 VVVAFKDARALPWRVNRWYKEEAILVVADRSRKEVEAGDGFYLTGAT--GSD--GELKVQ 420

Query: 421 RGNALMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 455
           RG+ LMEMG+KESLGTVLLVVRPP++M+DD+LSDEDWD
Sbjct: 421 RGSELMEMGLKESLGTVLLVVRPPKDMDDDQLSDEDWD 447

BLAST of Chy2G040670 vs. NCBI nr
Match: XP_004142574.1 (rubisco accumulation factor 1.1, chloroplastic [Cucumis sativus] >KGN66790.1 hypothetical protein Csa_007640 [Cucumis sativus])

HSP 1 Score: 842 bits (2175), Expect = 6.04e-307
Identity = 432/454 (95.15%), Postives = 442/454 (97.36%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPISAIINPSPSSLAAKQ 60
           MLSSTITNANSLS LSSIAHTTSIFLHQP DSPLRLFLRRRLNPISAIINPS SSLAAKQ
Sbjct: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPP+LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120

Query: 121 GISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN FIVGAQVRESL+QSNDSDPDV+ASFDTGGAELLYEIRLLSTEKRAAAAKYI
Sbjct: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRT 240
           VENRLDSKGAQDLARAMKDFPRR+GDKGWEYFDYD AGDCLAYMYYRLSREYNSS+ERRT
Sbjct: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGA V+VPVVRMKIGEVAEATTVV
Sbjct: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPME+RSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNA 420
           F+DARVLPWRVNRWYKEEPILVVADR R+EVVAGDGFYLMGG    GDGGGDLKVERGNA
Sbjct: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGG----GDGGGDLKVERGNA 420

Query: 421 LMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 454
           LMEMGVKESLGTVLLVVRPPRE EDD+LSDEDWD
Sbjct: 421 LMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 450

BLAST of Chy2G040670 vs. NCBI nr
Match: TYK28779.1 (rubisco accumulation factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 838 bits (2164), Expect = 3.33e-305
Identity = 425/454 (93.61%), Postives = 441/454 (97.14%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPISAIINPSPSSLAAKQ 60
           MLSSTITNANSL+ LSSIAHTT+IFLHQPIDSPLRLFLRRR NPISAIINPSPS LAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLN+LSNRLGLWFEYAPLISSLLQEGFTPP LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN F+VGAQVRESLVQSNDSDPDV+ASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRT 240
           VENRLDSKGAQDLARA+KDFPRRKGD+GWE FDYDSAGDCLAYMYYRLSREYN+SSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKAR+LIVGDLE KGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPME+RSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNA 420
           FKDARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGG+LKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 454
           L EMGVKESLGTV+LVVRPP+EMEDD+LSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of Chy2G040670 vs. NCBI nr
Match: XP_008462710.1 (PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo])

HSP 1 Score: 837 bits (2161), Expect = 9.55e-305
Identity = 424/454 (93.39%), Postives = 441/454 (97.14%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPISAIINPSPSSLAAKQ 60
           MLSSTITNANSL+ LSSIAHTT+IFLHQPIDSPLRLFLRRR NPISAIINPSPS LAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLN+LSNRLGLWF+YAPLISSLLQEGFTPP LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN F+VGAQVRESLVQSNDSDPDV+ASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRT 240
           VENRLDSKGAQDLARA+KDFPRRKGD+GWE FDYDSAGDCLAYMYYRLSREYN+SSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKAR+LIVGDLE KGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPME+RSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNA 420
           FKDARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGG+LKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 454
           L EMGVKESLGTV+LVVRPP+EMEDD+LSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of Chy2G040670 vs. NCBI nr
Match: KAA0062559.1 (rubisco accumulation factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 835 bits (2157), Expect = 3.89e-304
Identity = 424/454 (93.39%), Postives = 440/454 (96.92%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPISAIINPSPSSLAAKQ 60
           MLSSTITNANSL+ LSSIAHTT+IFLHQPIDSPLRLFLRRR NPISAIINPSPS LAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLN+LSNRLGLWFEYAPLISSLLQEGFTPP LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN F+VGAQVRESLVQSNDSDPDV+ASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRT 240
           VENRLDSKGAQDLARA+KDFPRRKGD+GWE FDYDSAGDCLAYMYYRLSREYN+SSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKV VTEKAR+LIVGDLE KGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVGVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPME+RSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FKDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNA 420
           FKDARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGG+LKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LMEMGVKESLGTVLLVVRPPREMEDDELSDEDWD 454
           L EMGVKESLGTV+LVVRPP+EMEDD+LSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of Chy2G040670 vs. NCBI nr
Match: XP_038880540.1 (rubisco accumulation factor 1.1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 759 bits (1961), Expect = 2.15e-274
Identity = 387/451 (85.81%), Postives = 414/451 (91.80%), Query Frame = 0

Query: 4   STITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPISAIINPSPSSLAAKQQVY 63
           ST T ANSL+ LS+ AHTT+ FLH P DS LRLFLRRR N ISA +NPSP  LAAKQQVY
Sbjct: 3   STTTTANSLTSLSAAAHTTATFLHPPRDSSLRLFLRRRPNSISATLNPSP--LAAKQQVY 62

Query: 64  QPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEITGIS 123
           QPFRPPPSPLP QYRSLD EGKLN+LSNRLGLWFEYAPLISSL+QEGFTPP LEEITGI+
Sbjct: 63  QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIT 122

Query: 124 GVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKYIVEN 183
           GVQQNIF+VGAQVRESLVQSN++DPDV+A+FDT GAELLYEIRLLSTEKRAAAA+YIVEN
Sbjct: 123 GVQQNIFVVGAQVRESLVQSNNADPDVIAAFDTSGAELLYEIRLLSTEKRAAAARYIVEN 182

Query: 184 RLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERRTAAL 243
           RLD KGAQDLARA+KDFPRR+GDKGWE FDY+  GDCLAYMYYRLSREYN+ SE RTAAL
Sbjct: 183 RLDIKGAQDLARALKDFPRRRGDKGWECFDYEEPGDCLAYMYYRLSREYNNPSEPRTAAL 242

Query: 244 EEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVVVMP 303
           EEALKVVVTEKARDLIVGDLEGKGDGK+GVEEEI  G+RVPVVRMKIGEVAEATTV+VMP
Sbjct: 243 EEALKVVVTEKARDLIVGDLEGKGDGKEGVEEEIEVGIRVPVVRMKIGEVAEATTVLVMP 302

Query: 304 VCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKD 363
           VCKAGEGEKGVGEAPME+RSEGEFGVVVAEK W +WVVLPGWEPV GLVKGGGVVVAF+D
Sbjct: 303 VCKAGEGEKGVGEAPMELRSEGEFGVVVAEKEWRKWVVLPGWEPVVGLVKGGGVVVAFED 362

Query: 364 ARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNALME 423
           AR LPWRVNRWYKEEPILVV DR RKEVVAGDGFYL G TVGGG+    LKV+RGNALME
Sbjct: 363 ARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTGATVGGGE----LKVQRGNALME 422

Query: 424 MGVKESLGTVLLVVRPPREMEDDELSDEDWD 454
           MGVKESLGTVLLVVRPP+EMEDD+LSDEDWD
Sbjct: 423 MGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 447

BLAST of Chy2G040670 vs. TAIR 10
Match: AT5G28500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1); Has 109 Blast hits to 109 proteins in 49 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 446.4 bits (1147), Expect = 2.7e-125
Identity = 255/457 (55.80%), Postives = 325/457 (71.12%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPI-SAIINPSPSSLAAK 60
           MLS T T  +S  +  S  H    F  +P+        R+    I SA+I  S      K
Sbjct: 1   MLSLTATTLSSSIFTQSKTH--GFFNTRPV-------YRKPFTTITSALIPASNRQAPPK 60

Query: 61  QQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEI 120
           QQ+YQPFRPPPSP+PP++RSLDT GK+ +L++RLGLWFEYAPLISSL  EGFTPP +EE+
Sbjct: 61  QQLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEEL 120

Query: 121 TGISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKY 180
           TGISGV+QN  IVGAQVR+SLVQS  + P+++A+FDT GAELLYEIRLL+T +R AAA+Y
Sbjct: 121 TGISGVEQNSLIVGAQVRDSLVQSG-AKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEY 180

Query: 181 IVENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERR 240
           IV++  D+KGA DLARA+KDFP R+GD G   FDY+  GDCL++M YR SRE+ S SE R
Sbjct: 181 IVDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIR 240

Query: 241 TAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTV 300
           T  LE+AL+  VTEKA+  ++ +L G+ + +   EEEI   +RVPVVR++ GEVA A++V
Sbjct: 241 TTLLEQALETAVTEKAKKAVLRELHGESEEERVKEEEIKI-IRVPVVRLRFGEVAGASSV 300

Query: 301 VVMPVCKAGEGEKGVGEAPMEMRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVV 360
           VV+PVCKA EGE+ + EAPME  S GEFGVV AEK WSRWVVLPGW+PV  + K  GV V
Sbjct: 301 VVLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVAV 360

Query: 361 AFKDAR-VLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERG 420
           +F D R VLPW      K E I+VV DR +K V A +G+Y +    GG      +K++RG
Sbjct: 361 SFSDDREVLPWN----GKGEAIMVVIDREKKTVEADNGYYYLVVADGG------MKLDRG 420

Query: 421 NALMEMGVKESLGTVLLVVRPPREMEDD-ELSDEDWD 455
             L E GV ESLG V+LVVRPPR+ +D+ +++DEDWD
Sbjct: 421 LVLKEKGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434

BLAST of Chy2G040670 vs. TAIR 10
Match: AT3G04550.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 434.5 bits (1116), Expect = 1.1e-121
Identity = 236/432 (54.63%), Postives = 312/432 (72.22%), Query Frame = 0

Query: 29  PIDSPLRLFLRRRLNPISAIINPSPSSLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNI 88
           P+   +   +   + P  +  N  P +  A+QQ+YQPFRPP SP+P Q+RSLD+ GK+ I
Sbjct: 31  PLPRTVSFTVTASMIPKRSSANMIPKNPPARQQLYQPFRPPSSPIPTQFRSLDSAGKIEI 90

Query: 89  LSNRLGLWFEYAPLISSLLQEGFTPPILEEITGISGVQQNIFIVGAQVRESLVQSNDSDP 148
           L+ R+ LWFEYAPLISSL  +GFTPP +EE+TGIS ++QN  IVGAQVR+S++QS   +P
Sbjct: 91  LAGRMALWFEYAPLISSLYTDGFTPPTIEELTGISSIEQNRLIVGAQVRDSILQS-IHEP 150

Query: 149 DVVASFDTGGAELLYEIRLLSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRKGDKG 208
           +++++FDTGGAELLYEIRLLST +R AAA +I++  +DSKGAQDLARA+KD+P R+GD G
Sbjct: 151 ELISAFDTGGAELLYEIRLLSTTQRVAAATFIIDRNIDSKGAQDLARAIKDYPNRRGDVG 210

Query: 209 WEYFDYDSAGDCLAYMYYRLSREYNSSSERRTAALEEALKVVVTEKARDL----IVGDLE 268
           W  FDY+  GDCL+++YYR SRE  + S++RT+ L +AL V  +EKA++     + GD E
Sbjct: 211 WLDFDYNLPGDCLSFLYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKE 270

Query: 269 GKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEMRSE 328
            + + +   +EE    +R+PVVR+K GEVAEAT+VVV+PVCKA EGEK + EAPME+ + 
Sbjct: 271 AEKEKEKKKKEEEVKAIRIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAG 330

Query: 329 GEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKDAR-VLPWRVNRWYKEEPILVV 388
           G+F VV AEKGW RWVVLP W PVA + K GGV V+F+D R VLPW      KEEP+LVV
Sbjct: 331 GDFKVVEAEKGWKRWVVLPSWNPVAAIGK-GGVAVSFRDDRKVLPWD----GKEEPLLVV 390

Query: 389 ADRRRKEVVAGDGFYLMGGTVGGGDGGGDLKVERGNALMEMGVKESLGTVLLVVRPPREM 448
           ADR R  V A DG+YL+    G       LK+E+G+ L    VKESLG V+LVVRPPRE 
Sbjct: 391 ADRVRNVVEADDGYYLVVAENG-------LKLEKGSDLKAREVKESLGMVVLVVRPPRED 449

Query: 449 EDD-ELSDEDWD 455
           +DD + S ++WD
Sbjct: 451 DDDWQTSHQNWD 449

BLAST of Chy2G040670 vs. TAIR 10
Match: AT5G28500.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1). )

HSP 1 Score: 279.6 bits (714), Expect = 4.4e-75
Identity = 154/276 (55.80%), Postives = 199/276 (72.10%), Query Frame = 0

Query: 1   MLSSTITNANSLSYLSSIAHTTSIFLHQPIDSPLRLFLRRRLNPI-SAIINPSPSSLAAK 60
           MLS T T  +S  +  S  H    F  +P+        R+    I SA+I  S      K
Sbjct: 1   MLSLTATTLSSSIFTQSKTH--GFFNTRPV-------YRKPFTTITSALIPASNRQAPPK 60

Query: 61  QQVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPILEEI 120
           QQ+YQPFRPPPSP+PP++RSLDT GK+ +L++RLGLWFEYAPLISSL  EGFTPP +EE+
Sbjct: 61  QQLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEEL 120

Query: 121 TGISGVQQNIFIVGAQVRESLVQSNDSDPDVVASFDTGGAELLYEIRLLSTEKRAAAAKY 180
           TGISGV+QN  IVGAQVR+SLVQS  + P+++A+FDT GAELLYEIRLL+T +R AAA+Y
Sbjct: 121 TGISGVEQNSLIVGAQVRDSLVQSG-AKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEY 180

Query: 181 IVENRLDSKGAQDLARAMKDFPRRKGDKGWEYFDYDSAGDCLAYMYYRLSREYNSSSERR 240
           IV++  D+KGA DLARA+KDFP R+GD G   FDY+  GDCL++M YR SRE+ S SE R
Sbjct: 181 IVDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIR 240

Query: 241 TAALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEE 276
           T  LE+AL+  VTEKA+  ++ +L G+ + + G E+
Sbjct: 241 TTLLEQALETAVTEKAKKAVLRELHGESEEERGKED 266

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LKR83.8e-12455.80Rubisco accumulation factor 1.1, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
Q9SR191.5e-12054.63Rubisco accumulation factor 1.2, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
Q7XDY92.0e-9347.71Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=... [more]
B4FR294.0e-8946.15Rubisco accumulation factor 1, chloroplastic OS=Zea mays OX=4577 GN=RAF1 PE=1 SV... [more]
Q8YLP63.2e-2229.08RuBisCO accumulation factor 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX ... [more]
Match NameE-valueIdentityDescription
A0A0A0LY431.1e-24095.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690280 PE=4 SV=1[more]
A0A5D3DZE42.2e-23993.61Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3CHL84.8e-23993.39rubisco accumulation factor 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10350... [more]
A0A5A7VA631.4e-23893.39Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A6J1F4513.0e-18877.29rubisco accumulation factor 1.1, chloroplastic-like OS=Cucurbita moschata OX=366... [more]
Match NameE-valueIdentityDescription
XP_004142574.16.04e-30795.15rubisco accumulation factor 1.1, chloroplastic [Cucumis sativus] >KGN66790.1 hyp... [more]
TYK28779.13.33e-30593.61rubisco accumulation factor 1 [Cucumis melo var. makuwa][more]
XP_008462710.19.55e-30593.39PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo][more]
KAA0062559.13.89e-30493.39rubisco accumulation factor 1 [Cucumis melo var. makuwa][more]
XP_038880540.12.15e-27485.81rubisco accumulation factor 1.1, chloroplastic-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT5G28500.12.7e-12555.80unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G04550.11.1e-12154.63unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas... [more]
AT5G28500.24.4e-7555.80unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041358Rubisco accumulation factor 1, alpha helical domainPFAMPF18578Raf1_Ncoord: 154..260
e-value: 3.0E-35
score: 121.0
IPR040781Rubisco accumulation factor 1, helix turn helix domainPFAMPF18579Raf1_HTHcoord: 81..141
e-value: 3.2E-22
score: 77.9
IPR040858Rubisco accumulation factor 1, C-terminalPFAMPF18087RuBisCo_chap_Ccoord: 283..441
e-value: 2.6E-33
score: 114.6
IPR037494Rubisco accumulation factor 1PANTHERPTHR35299FAMILY NOT NAMEDcoord: 1..454
NoneNo IPR availablePANTHERPTHR35299:SF3RUBISCO ACCUMULATION FACTOR 1.2, CHLOROPLASTICcoord: 1..454

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G040670.1Chy2G040670.1mRNA