Chy2G040470 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATGGTAAGATGATGATGGCCCCTTCGGGGTCTTCGGGAGCATCAAGCTCGACTGCAGCAAATCCTCTTGGTCAAGTGGTGGAAAAGAGAAATTACGCAGTTTCCCAAGATGATCTTTTTGATGCAGTGGAAGCAGAGGAAAGGAGAGAGTGGGAAGAGCTCCGTAACACAAAGGAATGGAAAGAAAGTGAGTTTGAAGAGTTCGAAAGAGAAAGTGAGATTTGA ATGGAAGATGGTAAGATGATGATGGCCCCTTCGGGGTCTTCGGGAGCATCAAGCTCGACTGCAGCAAATCCTCTTGGTCAAGTGGTGGAAAAGAGAAATTACGCAGTTTCCCAAGATGATCTTTTTGATGCAGTGGAAGCAGAGGAAAGGAGAGAGTGGGAAGAGCTCCGTAACACAAAGGAATGGAAAGAAAGTGAGTTTGAAGAGTTCGAAAGAGAAAGTGAGATTTGA ATGGAAGATGGTAAGATGATGATGGCCCCTTCGGGGTCTTCGGGAGCATCAAGCTCGACTGCAGCAAATCCTCTTGGTCAAGTGGTGGAAAAGAGAAATTACGCAGTTTCCCAAGATGATCTTTTTGATGCAGTGGAAGCAGAGGAAAGGAGAGAGTGGGAAGAGCTCCGTAACACAAAGGAATGGAAAGAAAGTGAGTTTGAAGAGTTCGAAAGAGAAAGTGAGATTTGA MEDGKMMMAPSGSSGASSSTAANPLGQVVEKRNYAVSQDDLFDAVEAEERREWEELRNTKEWKESEFEEFERESEI* Homology
BLAST of Chy2G040470 vs. ExPASy TrEMBL
Match: A0A5A7P3C3 (Dynein heavy chain 17 OS=Striga asiatica OX=4170 GN=STAS_03012 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 8.7e-16 Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of Chy2G040470 vs. ExPASy TrEMBL
Match: A0A5A7SWH3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48403G00020 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.4e-05 Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of Chy2G040470 vs. ExPASy TrEMBL
Match: A0A5A7QJV4 (Glycerol-3-phosphate acyltransferase 1 OS=Striga asiatica OX=4170 GN=STAS_22598 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.6e-04 Identity = 26/43 (60.47%), Postives = 37/43 (86.05%), Query Frame = 0
BLAST of Chy2G040470 vs. NCBI nr
Match: GER27316.1 (dynein heavy chain 17 [Striga asiatica]) HSP 1 Score: 91.7 bits (226), Expect = 4.53e-21 Identity = 49/59 (83.05%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Chy2G040470 vs. NCBI nr
Match: KAA0035390.1 (hypothetical protein E6C27_scaffold48403G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 1.87e-08 Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Chy2G040470 vs. NCBI nr
Match: GER45629.1 (glycerol-3-phosphate acyltransferase 1 [Striga asiatica]) HSP 1 Score: 53.9 bits (128), Expect = 1.12e-06 Identity = 26/43 (60.47%), Postives = 37/43 (86.05%), Query Frame = 0
BLAST of Chy2G040470 vs. NCBI nr
Match: XP_015947648.1 (uncharacterized protein LOC107472660 [Arachis duranensis]) HSP 1 Score: 50.1 bits (118), Expect = 9.07e-05 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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