Chy2G039400 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGGTAAGGCGAAGCCCAAGAAGCACACGGCGAAGGAGATCGCAGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGAAAGGCTGGCCTCGCCGACCGCTCTGGCCATGAGAAAGGCGGCCACGCCAAGTTTGAATGCCCGCACTGCAAGATTACGGCGCCTGATGTAAAGTCTATGCAGATTCATCACGAATCCAAGCACCCCAAAATCCCTTTTGAGGAGGACAAGGTTACAAATCTCCACGCTGTTCGTGTTGCTGCCGAGGCGTCGAAGCCAAAACCGGGTGTCAGAGGCAGCTACAAAAAGTGAAGATAATCCGGATTCATGAGGATGGATGGTGGGTGGGCTCAATTTTATGGTATTGGGTACTTTTGTTTTCGTCTTTTTTTTAAAAAAAAATCTTGGTCCTATGTCTTCTCTCTGGTGCTGATGGAAAGTGGCTTTAACTTGTAAGGTGTTTGAGTAAAACATATTCGATGTCCTTGGAGCTGAGGTCTTTGCAATTATGTATATTACATAAAAACATGATCATTGTTGTTATGGTAACCATGGAGGTGTTCATGTTCTTATTGTCTCTGCTTATCATGTCATGTTTAATTTTTATTGAGACTTAGAGTGGGCTTAATATGTTTTTGGATTGCTTTTCTGTGCTTAAGATGTTTATTGCTTGAGAATATTGTGTGATTTTTATTGGTACTTTGATATTTAGAAAGTAGATTAATGGGGAATGATTGATGGTTGACCCAGCTATGAAAGGAGGAAATTCGTAATTCTTGATGTCTCTGTGGTCGTCATGGCTTTACCTGTGTAAGTTCAATGTTTGATATTTATATGGTAGTTACTTGGGGTTTACATAAATTTTTAAAATCTACCATGTTTCAGGAGAAAGAGTAGTTATCTGGCATGGCATCTCAGGAGTTTTACCTTTTTGTGGTAGTTGTGTTTACTTTTACAGAATTAAATTATGTTGGCTCTTATAATAGCTTAACCGTTTGGGATACCTGTTGGAAATCAGATGACGACACAAGTATCTTTATTTCATTGTTGTTTTAGTTCAATGGTTGCATAGATGGGCCGAATCATCAATTCTTGGGATAGATAATTTGTGTCGGCTTGCATTGGTATGTGCAAGTATGTTGTCATGGTTGTTAACCAAGTCTTTGCAACAAGTTAATGCCTCTTCTTTTTGTCCTACCTCATGAGTGTCTTTGAGTTTTTTTTGGGTTGGCATTTTTCTTGGCTTTATAAAAGGGATCTTTCGTTCCAATCTATGGATATCTATGTATTTATATGAATGTATTTGTGTTCTCTTAACTTAGGCTCCTAATTTACCTTTTTGTTTTTAACTTGCATTTGGTCTCCAAGGAGCTACTGCACCGTAATCACTCTTTCTTTTTTTGCAGCATTCATCCTTAGTGAATTTCAATCCTCTTGGTATCAGACTCGGTTTATAAAGCTTGATTTTGGTTCTTATGTAAATATATTCTCTAAACTCCTTTTCCTATCCACTTGTACATTCTCTTAAATTCAAAACATCTCCTTGATATTGAGCCAGATCATGTTCTGATGATAGAGCTTTATTATTAGGCTAGGTTTTAGTTGGCTTGGTAAGCTAGACTCTGCTAGTCTATTCGGGAGAAATCCTTCAAAATTTGTTCGAGTCAGTGGTGCATTAAATTGGGAATGA ATGACGGGTAAGGCGAAGCCCAAGAAGCACACGGCGAAGGAGATCGCAGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGAAAGGCTGGCCTCGCCGACCGCTCTGGCCATGAGAAAGGCGGCCACGCCAAGTTTGAATGCCCGCACTGCAAGATTACGGCGCCTGATGTAAAGTCTATGCAGATTCATCACGAATCCAAGCACCCCAAAATCCCTTTTGAGGAGGACAAGGTTACAAATCTCCACGCTGTTCGTGTTGCTGCCGAGGCGTCGAAGCCAAAACCGGGTGTCAGAGGCAGCTACAAAAACTATGAAAGGAGGAAATTCGTAATTCTTGATGTCTCTGTGGTCGTCATGGCTTTACCTGTGCTAGGTTTTAGTTGGCTTGGTAAGCTAGACTCTGCTAGTCTATTCGGGAGAAATCCTTCAAAATTTGTTCGAGTCAGTGGTGCATTAAATTGGGAATGA ATGACGGGTAAGGCGAAGCCCAAGAAGCACACGGCGAAGGAGATCGCAGCTAAGATCGACGCAGCCACCACCAACAGAGGCGGCGGAAAGGCTGGCCTCGCCGACCGCTCTGGCCATGAGAAAGGCGGCCACGCCAAGTTTGAATGCCCGCACTGCAAGATTACGGCGCCTGATGTAAAGTCTATGCAGATTCATCACGAATCCAAGCACCCCAAAATCCCTTTTGAGGAGGACAAGGTTACAAATCTCCACGCTGTTCGTGTTGCTGCCGAGGCGTCGAAGCCAAAACCGGGTGTCAGAGGCAGCTACAAAAACTATGAAAGGAGGAAATTCGTAATTCTTGATGTCTCTGTGGTCGTCATGGCTTTACCTGTGCTAGGTTTTAGTTGGCTTGGTAAGCTAGACTCTGCTAGTCTATTCGGGAGAAATCCTTCAAAATTTGTTCGAGTCAGTGGTGCATTAAATTGGGAATGA MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGHEKGGHAKFECPHCKITAPDVKSMQIHHESKHPKIPFEEDKVTNLHAVRVAAEASKPKPGVRGSYKNYERRKFVILDVSVVVMALPVLGFSWLGKLDSASLFGRNPSKFVRVSGALNWE* Homology
BLAST of Chy2G039400 vs. ExPASy Swiss-Prot
Match: Q9M8S0 (Protein METHYLENE BLUE SENSITIVITY 1 OS=Arabidopsis thaliana OX=3702 GN=MBS1 PE=2 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 2.4e-41 Identity = 81/104 (77.88%), Postives = 89/104 (85.58%), Query Frame = 0
BLAST of Chy2G039400 vs. ExPASy Swiss-Prot
Match: Q9FFD8 (Protein METHYLENE BLUE SENSITIVITY 2 OS=Arabidopsis thaliana OX=3702 GN=MBS2 PE=1 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 2.9e-39 Identity = 80/105 (76.19%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of Chy2G039400 vs. ExPASy TrEMBL
Match: A0A5A7T9G3 (Zinc finger (C2H2 type) family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001180 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 2.0e-51 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of Chy2G039400 vs. ExPASy TrEMBL
Match: A0A1S3B9F4 (uncharacterized protein LOC103487230 OS=Cucumis melo OX=3656 GN=LOC103487230 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 2.0e-51 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of Chy2G039400 vs. ExPASy TrEMBL
Match: A0A5D3D8D3 (Zinc finger (C2H2 type) family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00090 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.7e-50 Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0
BLAST of Chy2G039400 vs. ExPASy TrEMBL
Match: A0A0A0LXT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G657510 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 5.5e-49 Identity = 99/104 (95.19%), Postives = 102/104 (98.08%), Query Frame = 0
BLAST of Chy2G039400 vs. ExPASy TrEMBL
Match: A0A6J1JHR8 (uncharacterized protein LOC111485822 OS=Cucurbita maxima OX=3661 GN=LOC111485822 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48 Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0
BLAST of Chy2G039400 vs. NCBI nr
Match: XP_008443699.1 (PREDICTED: uncharacterized protein LOC103487230 [Cucumis melo] >KAA0038267.1 Zinc finger (C2H2 type) family protein [Cucumis melo var. makuwa]) HSP 1 Score: 211 bits (536), Expect = 9.40e-68 Identity = 103/105 (98.10%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of Chy2G039400 vs. NCBI nr
Match: TYK19814.1 (Zinc finger (C2H2 type) family protein [Cucumis melo var. makuwa]) HSP 1 Score: 207 bits (528), Expect = 1.56e-66 Identity = 102/105 (97.14%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Chy2G039400 vs. NCBI nr
Match: XP_038901282.1 (protein METHYLENE BLUE SENSITIVITY 1-like [Benincasa hispida]) HSP 1 Score: 203 bits (517), Expect = 7.39e-65 Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Chy2G039400 vs. NCBI nr
Match: XP_011660225.1 (protein METHYLENE BLUE SENSITIVITY 1 [Cucumis sativus] >KGN66675.1 hypothetical protein Csa_007042 [Cucumis sativus]) HSP 1 Score: 202 bits (515), Expect = 1.49e-64 Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Chy2G039400 vs. NCBI nr
Match: XP_022961022.1 (uncharacterized protein LOC111461652 [Cucurbita moschata] >XP_022961023.1 uncharacterized protein LOC111461652 [Cucurbita moschata] >XP_022988627.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988628.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988629.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988631.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >XP_022988632.1 uncharacterized protein LOC111485822 [Cucurbita maxima] >KAG7023763.1 hypothetical protein SDJN02_14789, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 201 bits (512), Expect = 4.27e-64 Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of Chy2G039400 vs. TAIR 10
Match: AT3G02790.1 (zinc finger (C2H2 type) family protein ) HSP 1 Score: 169.9 bits (429), Expect = 1.7e-42 Identity = 81/104 (77.88%), Postives = 89/104 (85.58%), Query Frame = 0
BLAST of Chy2G039400 vs. TAIR 10
Match: AT5G16470.1 (zinc finger (C2H2 type) family protein ) HSP 1 Score: 162.9 bits (411), Expect = 2.1e-40 Identity = 80/105 (76.19%), Postives = 91/105 (86.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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