Chy2G039360 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G039360
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Disease resistance protein RGA2-like
Location	chrH02: 16348393 .. 16348770 (-)
RNA-Seq Expression	Chy2G039360
Synteny	Chy2G039360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGTCTGTATTTCTGAAGAATTTGATGTCAAAGTAATTGTTGAAAAGATTATAGAGTCTCTCACAATAAAGAGACCTAAGCCAAAACTTCAACTCGACACACTGCAAAGTATGCTTCAAGAGAAAATTGATGGAAAAAAATACTTGCTTGTCATGGATGATGTGTGGAATGTCAATCAGGCGAAATGGATTAGTCTAAAAGCGTTTCTTATTGGTGGAGCTAAGGGAAGTAGGATTTTGATCACAACTTGTACTCATCAAGTTGCACATACTTCTGACACAATTTTCTTCCATCATTTAAGTGAACTAGACAAGGACAACTCTTGGAAATTGTTTAGAAAAAATGGCATTTTCCAACGAATCAGAGGTGATTGA

mRNA sequence

ATGTGGGTCTGTATTTCTGAAGAATTTGATGTCAAAGTAATTGTTGAAAAGATTATAGAGTCTCTCACAATAAAGAGACCTAAGCCAAAACTTCAACTCGACACACTGCAAAGTATGCTTCAAGAGAAAATTGATGGAAAAAAATACTTGCTTGTCATGGATGATGTGTGGAATGTCAATCAGGCGAAATGGATTAGTCTAAAAGCGTTTCTTATTGGTGGAGCTAAGGGAAGTAGGATTTTGATCACAACTTGTACTCATCAAGTTGCACATACTTCTGACACAATTTTCTTCCATCATTTAAGTGAACTAGACAAGGACAACTCTTGGAAATTGTTTAGAAAAAATGGCATTTTCCAACGAATCAGAGGTGATTGA

Coding sequence (CDS)

ATGTGGGTCTGTATTTCTGAAGAATTTGATGTCAAAGTAATTGTTGAAAAGATTATAGAGTCTCTCACAATAAAGAGACCTAAGCCAAAACTTCAACTCGACACACTGCAAAGTATGCTTCAAGAGAAAATTGATGGAAAAAAATACTTGCTTGTCATGGATGATGTGTGGAATGTCAATCAGGCGAAATGGATTAGTCTAAAAGCGTTTCTTATTGGTGGAGCTAAGGGAAGTAGGATTTTGATCACAACTTGTACTCATCAAGTTGCACATACTTCTGACACAATTTTCTTCCATCATTTAAGTGAACTAGACAAGGACAACTCTTGGAAATTGTTTAGAAAAAATGGCATTTTCCAACGAATCAGAGGTGATTGA

Protein sequence

MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVNQAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRKNGIFQRIRGD*

Homology

[Close]

BLAST of Chy2G039360 vs. ExPASy Swiss-Prot
Match: Q7XBQ9 (Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.0e-19
Identity = 47/113 (41.59%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           +W+C+SE+FD K +++ I+ES+  +    ++ L  LQ  LQE ++GK+YLLV+DDVWN +
Sbjct: 209 IWICVSEDFDEKRLIKAIVESIEGRPLLGEMDLAPLQKKLQELLNGKRYLLVLDDVWNED 268

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLF 114
           Q KW +L+A L  GA G+ +L TT   +V     T+  + LS L +++ W LF
Sbjct: 269 QQKWANLRAVLKVGASGASVLTTTRLEKVGSIMGTLQPYELSNLSQEDCWLLF 321

[Close]

BLAST of Chy2G039360 vs. ExPASy Swiss-Prot
Match: Q7XA40 (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 5.9e-19
Identity = 48/115 (41.74%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           +WVC+S++FD K +++ I+ES+  K     + L  LQ  LQE ++GK+Y LV+DDVWN +
Sbjct: 209 IWVCVSDDFDEKRLIKAIVESIEGK-SLGDMDLAPLQKKLQELLNGKRYFLVLDDVWNED 268

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 116
           Q KW +L+A L  GA G+ ILITT   ++     T+  + LS L +++ W LF++
Sbjct: 269 QEKWDNLRAVLKIGASGASILITTRLEKIGSIMGTLQLYQLSNLSQEDCWLLFKQ 322

[Close]

BLAST of Chy2G039360 vs. ExPASy Swiss-Prot
Match: Q7XA39 (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=RGA4 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQ-LDTLQSMLQEKIDGKKYLLVMDDVWNV 60
           +WVC+S++FD K +++ II +  I+R  P ++ L + Q  LQE ++GK+YLLV+DDVWN 
Sbjct: 211 IWVCVSDDFDEKRLIKTIIGN--IERSSPHVEDLASFQKKLQELLNGKRYLLVLDDVWND 270

Query: 61  NQAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRKNGIF 120
           +  KW  L+A L  GA+G+ IL TT   +V     T+  +HLS L   +S  LF +    
Sbjct: 271 DLEKWAKLRAVLTVGARGASILATTRLEKVGSIMGTLQPYHLSNLSPHDSLLLFMQRAFG 330

Query: 121 QR 122
           Q+
Sbjct: 331 QQ 330

[Close]

BLAST of Chy2G039360 vs. ExPASy Swiss-Prot
Match: Q7XA42 (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 9.5e-17
Identity = 46/113 (40.71%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           +W+CIS++F+ K +++ I+ES+  K     + L  LQ  LQE ++GK+Y LV+DDVWN +
Sbjct: 209 IWICISDDFNEKRLIKAIVESIEGK-SLSDMDLAPLQKKLQELLNGKRYFLVLDDVWNED 268

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLF 114
           Q KW +L+A L  GA G+ +L TT   +V     T+  + LS L  ++ W LF
Sbjct: 269 QHKWANLRAVLKVGASGAFVLTTTRLEKVGSIMGTLQPYELSNLSPEDCWFLF 320

[Close]

BLAST of Chy2G039360 vs. ExPASy Swiss-Prot
Match: Q9LRR4 (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-15
Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGK--KYLLVMDDVWN 60
           +W  +SEEFDV  I +K+ ES+T  RP     LD LQ  L+E++ G    +LLV+DD+WN
Sbjct: 230 VWAHVSEEFDVFKITKKVYESVT-SRPCEFTDLDVLQVKLKERLTGTGLPFLLVLDDLWN 289

Query: 61  VNQAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 116
            N A W  L+   I  A+GS+IL+TT + +VA     +  H+L  L   + W LF K
Sbjct: 290 ENFADWDLLRQPFIHAAQGSQILVTTRSQRVASIMCAVHVHNLQPLSDGDCWSLFMK 345

[Close]

BLAST of Chy2G039360 vs. ExPASy TrEMBL
Match: A0A5D3CIY9 (Putative disease resistance protein RGA4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003550 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.7e-48
Identity = 99/115 (86.09%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MWVCISEEFDVKVIVE IIESLT KRP+P L LDTLQSML+ +IDGKKYLLVMDDVWNVN
Sbjct: 229 MWVCISEEFDVKVIVENIIESLTKKRPEPNLHLDTLQSMLRGQIDGKKYLLVMDDVWNVN 288

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 116
           +AKWISLKAFL+GGAKGSRILITT THQVAH SDT+ FHHLSELDK+NSW+LFRK
Sbjct: 289 RAKWISLKAFLMGGAKGSRILITTRTHQVAHISDTVLFHHLSELDKNNSWELFRK 343

[Close]

BLAST of Chy2G039360 vs. ExPASy TrEMBL
Match: A0A5D3CG57 (Putative disease resistance protein RGA4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003540 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.8e-48
Identity = 96/115 (83.48%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MWVCISEEFDVK+IVEKIIESLT KRP+P LQLDTLQ+ML+EKIDGK+YLLVMDDVWNVN
Sbjct: 228 MWVCISEEFDVKIIVEKIIESLTKKRPEPNLQLDTLQNMLREKIDGKRYLLVMDDVWNVN 287

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 116
           + KWI+LKAFL GGAKGSRILITT THQVAHTS+T+ FHHLSEL+K++SW+LFRK
Sbjct: 288 REKWINLKAFLTGGAKGSRILITTRTHQVAHTSETVLFHHLSELNKNSSWELFRK 342

[Close]

BLAST of Chy2G039360 vs. ExPASy TrEMBL
Match: A0A1S3BPS1 (putative disease resistance protein RGA4 OS=Cucumis melo OX=3656 GN=LOC103492203 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.8e-48
Identity = 96/115 (83.48%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MWVCISEEFDVK+IVEKIIESLT KRP+P LQLDTLQ+ML+EKIDGK+YLLVMDDVWNVN
Sbjct: 228 MWVCISEEFDVKIIVEKIIESLTKKRPEPNLQLDTLQNMLREKIDGKRYLLVMDDVWNVN 287

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 116
           + KWI+LKAFL GGAKGSRILITT THQVAHTS+T+ FHHLSEL+K++SW+LFRK
Sbjct: 288 REKWINLKAFLTGGAKGSRILITTRTHQVAHTSETVLFHHLSELNKNSSWELFRK 342

[Close]

BLAST of Chy2G039360 vs. ExPASy TrEMBL
Match: A0A678PED4 (CNL-I OS=Cucumis melo OX=3656 GN=MELO3C015354 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.8e-48
Identity = 96/115 (83.48%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MWVCISEEFDVK+IVEKIIESLT KRP+P LQLDTLQ+ML+EKIDGK+YLLVMDDVWNVN
Sbjct: 228 MWVCISEEFDVKIIVEKIIESLTKKRPEPNLQLDTLQNMLREKIDGKRYLLVMDDVWNVN 287

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 116
           + KWI+LKAFL GGAKGSRILITT THQVAHTS+T+ FHHLSEL+K++SW+LFRK
Sbjct: 288 REKWINLKAFLTGGAKGSRILITTRTHQVAHTSETVLFHHLSELNKNSSWELFRK 342

[Close]

BLAST of Chy2G039360 vs. ExPASy TrEMBL
Match: A0A678QSS1 (CNL-III OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 8.2e-48
Identity = 98/115 (85.22%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MWVCISEEFDVKVIVE IIESLT KRP+P L LDTLQSML+ +IDGKKYLLVMDDVWNVN
Sbjct: 229 MWVCISEEFDVKVIVENIIESLTKKRPEPNLHLDTLQSMLRGQIDGKKYLLVMDDVWNVN 288

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 116
           +AKWISLKAFL+GGAKGSRILITT THQVAH  DT+ FHHLSELDK+NSW+LFRK
Sbjct: 289 RAKWISLKAFLMGGAKGSRILITTRTHQVAHIFDTVLFHHLSELDKNNSWELFRK 343

[Close]

BLAST of Chy2G039360 vs. NCBI nr
Match: TYK10209.1 (putative disease resistance protein RGA4 [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (506), Expect = 8.75e-57
Identity = 99/115 (86.09%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MWVCISEEFDVKVIVE IIESLT KRP+P L LDTLQSML+ +IDGKKYLLVMDDVWNVN
Sbjct: 229 MWVCISEEFDVKVIVENIIESLTKKRPEPNLHLDTLQSMLRGQIDGKKYLLVMDDVWNVN 288

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 115
           +AKWISLKAFL+GGAKGSRILITT THQVAH SDT+ FHHLSELDK+NSW+LFRK
Sbjct: 289 RAKWISLKAFLMGGAKGSRILITTRTHQVAHISDTVLFHHLSELDKNNSWELFRK 343

[Close]

BLAST of Chy2G039360 vs. NCBI nr
Match: XP_008450703.1 (PREDICTED: putative disease resistance protein RGA4 [Cucumis melo])

HSP 1 Score: 197 bits (502), Expect = 8.65e-56
Identity = 96/115 (83.48%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MWVCISEEFDVK+IVEKIIESLT KRP+P LQLDTLQ+ML+EKIDGK+YLLVMDDVWNVN
Sbjct: 228 MWVCISEEFDVKIIVEKIIESLTKKRPEPNLQLDTLQNMLREKIDGKRYLLVMDDVWNVN 287

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 115
           + KWI+LKAFL GGAKGSRILITT THQVAHTS+T+ FHHLSEL+K++SW+LFRK
Sbjct: 288 REKWINLKAFLTGGAKGSRILITTRTHQVAHTSETVLFHHLSELNKNSSWELFRK 342

[Close]

BLAST of Chy2G039360 vs. NCBI nr
Match: TYK10208.1 (putative disease resistance protein RGA4 [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (502), Expect = 8.67e-56
Identity = 96/115 (83.48%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MWVCISEEFDVK+IVEKIIESLT KRP+P LQLDTLQ+ML+EKIDGK+YLLVMDDVWNVN
Sbjct: 228 MWVCISEEFDVKIIVEKIIESLTKKRPEPNLQLDTLQNMLREKIDGKRYLLVMDDVWNVN 287

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 115
           + KWI+LKAFL GGAKGSRILITT THQVAHTS+T+ FHHLSEL+K++SW+LFRK
Sbjct: 288 REKWINLKAFLTGGAKGSRILITTRTHQVAHTSETVLFHHLSELNKNSSWELFRK 342

[Close]

BLAST of Chy2G039360 vs. NCBI nr
Match: ARA91522.1 (CNL-I [Cucumis melo])

HSP 1 Score: 197 bits (502), Expect = 8.99e-56
Identity = 96/115 (83.48%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MWVCISEEFDVK+IVEKIIESLT KRP+P LQLDTLQ+ML+EKIDGK+YLLVMDDVWNVN
Sbjct: 228 MWVCISEEFDVKIIVEKIIESLTKKRPEPNLQLDTLQNMLREKIDGKRYLLVMDDVWNVN 287

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 115
           + KWI+LKAFL GGAKGSRILITT THQVAHTS+T+ FHHLSEL+K++SW+LFRK
Sbjct: 288 REKWINLKAFLTGGAKGSRILITTRTHQVAHTSETVLFHHLSELNKNSSWELFRK 342

[Close]

BLAST of Chy2G039360 vs. NCBI nr
Match: ARA91523.1 (CNL-III [Cucumis melo])

HSP 1 Score: 197 bits (500), Expect = 1.60e-55
Identity = 98/115 (85.22%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MWVCISEEFDVKVIVE IIESLT KRP+P L LDTLQSML+ +IDGKKYLLVMDDVWNVN
Sbjct: 229 MWVCISEEFDVKVIVENIIESLTKKRPEPNLHLDTLQSMLRGQIDGKKYLLVMDDVWNVN 288

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 115
           +AKWISLKAFL+GGAKGSRILITT THQVAH  DT+ FHHLSELDK+NSW+LFRK
Sbjct: 289 RAKWISLKAFLMGGAKGSRILITTRTHQVAHIFDTVLFHHLSELDKNNSWELFRK 343

[Close]

BLAST of Chy2G039360 vs. TAIR 10
Match: AT3G14470.1 (NB-ARC domain-containing disease resistance protein )

HSP 1 Score: 84.3 bits (207), Expect = 7.4e-17
Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGK--KYLLVMDDVWN 60
           +W  +SEEFDV  I +K+ ES+T  RP     LD LQ  L+E++ G    +LLV+DD+WN
Sbjct: 230 VWAHVSEEFDVFKITKKVYESVT-SRPCEFTDLDVLQVKLKERLTGTGLPFLLVLDDLWN 289

Query: 61  VNQAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 116
            N A W  L+   I  A+GS+IL+TT + +VA     +  H+L  L   + W LF K
Sbjct: 290 ENFADWDLLRQPFIHAAQGSQILVTTRSQRVASIMCAVHVHNLQPLSDGDCWSLFMK 345

[Close]

BLAST of Chy2G039360 vs. TAIR 10
Match: AT3G46530.1 (NB-ARC domain-containing disease resistance protein )

HSP 1 Score: 61.2 bits (147), Expect = 6.7e-10
Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 0


Query: 2   WVCISEEFDVKVIVEKIIESLTIKRPKP-----KLQLDTLQSMLQEKIDGKKYLLVMDDV 61
           W  +S+E+    I+ +II SL +   +      K   + L+  L   ++GKKYL+V+DD+
Sbjct: 220 WTYVSQEYKTGDILMRIIRSLGMTSGEELEKIRKFAEEELEVYLYGLLEGKKYLVVVDDI 279

Query: 62  WNVNQAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFF-HHLSELDKDNSWKLFRK 116
           W   +  W SLK  L    +GSR++ITT    VA   D  F+ H L  L  + SW+LF +
Sbjct: 280 W--EREAWDSLKRALPCNHEGSRVIITTRIKAVAEGVDGRFYAHKLRFLTFEESWELFEQ 337

[Close]

BLAST of Chy2G039360 vs. TAIR 10
Match: AT3G46730.1 (NB-ARC domain-containing disease resistance protein )

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-09
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 2   WVCISEEFDVKVIVEKIIESLTI------KRPKPKLQLDTLQSMLQEKIDGKKYLLVMDD 61
           W  +S+E+  + I+ +II SL I      ++ K   + + L+  L   ++GK Y++V+DD
Sbjct: 220 WTYVSQEYKTRDILIRIIRSLGIVSAEEMEKIKMFEEDEELEVYLYGLLEGKNYMVVVDD 279

Query: 62  VWNVNQAKWISLKAFLIGGAKGSRILITTCTHQVAH-TSDTIFFHHLSELDKDNSWKLFR 116
           VW+ +   W SLK  L    +GS+++ITT    +A     T++ H L  L  + SW LF 
Sbjct: 280 VWDPD--AWESLKRALPCDHRGSKVIITTRIRAIAEGVEGTVYAHKLRFLTFEESWTLFE 338

[Close]

BLAST of Chy2G039360 vs. TAIR 10
Match: AT3G14460.1 (LRR and NB-ARC domains-containing disease resistance protein )

HSP 1 Score: 57.4 bits (137), Expect = 9.7e-09
Identity = 27/115 (23.48%), Postives = 61/115 (53.04%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           MW+     F+V  + + +++ +T      +  L +LQ  L++ + GK++LLV+DD W+ +
Sbjct: 227 MWISAGINFNVFTVTKAVLQDITSSAVNTE-DLPSLQIQLKKTLSGKRFLLVLDDFWSES 286

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAHTSDTIFFHHLSELDKDNSWKLFRK 116
            ++W S +       +GS+I++TT +  V+  +     + +  +  +  W+L  +
Sbjct: 287 DSEWESFQVAFTDAEEGSKIVLTTRSEIVSTVAKAEKIYQMKLMTNEECWELISR 340

[Close]

BLAST of Chy2G039360 vs. TAIR 10
Match: AT3G50950.2 (HOPZ-ACTIVATED RESISTANCE 1 )

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07
Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 0


Query: 1   MWVCISEEFDVKVIVEKIIESLTIKRPKPKLQLDTLQSMLQEKIDGKKYLLVMDDVWNVN 60
           +WV +S+ F  + I+  I+ +L          + TL   +Q+ + GK+YL+VMDDVW+ N
Sbjct: 216 IWVSVSQTFTEEQIMRSILRNLGDASVGD--DIGTLLRKIQQYLLGKRYLIVMDDVWDKN 275

Query: 61  QAKWISLKAFLIGGAKGSRILITTCTHQVAH--TSDTIFFHHLSELDKDNSWKLF 114
            + W  +   L  G  GS +++TT +  VA    +     H    L  DNSW LF
Sbjct: 276 LSWWDKIYQGLPRGQGGS-VIVTTRSESVAKRVQARDDKTHRPELLSPDNSWLLF 327

The following BLAST results are available for this feature:

BLAST of Chy2G039360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XBQ9	2.0e-19	41.59	Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 ...	[more]
Q7XA40	5.9e-19	41.74	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q7XA39	1.9e-17	40.98	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q7XA42	9.5e-17	40.71	Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q9LRR4	1.0e-15	41.88	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Chy2G039360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIY9	1.7e-48	86.09	Putative disease resistance protein RGA4 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CG57	4.8e-48	83.48	Putative disease resistance protein RGA4 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BPS1	4.8e-48	83.48	putative disease resistance protein RGA4 OS=Cucumis melo OX=3656 GN=LOC103492203...	[more]
A0A678PED4	4.8e-48	83.48	CNL-I OS=Cucumis melo OX=3656 GN=MELO3C015354 PE=4 SV=1	[more]
A0A678QSS1	8.2e-48	85.22	CNL-III OS=Cucumis melo OX=3656 PE=4 SV=1	[more]

BLAST of Chy2G039360 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10209.1	8.75e-57	86.09	putative disease resistance protein RGA4 [Cucumis melo var. makuwa]	[more]
XP_008450703.1	8.65e-56	83.48	PREDICTED: putative disease resistance protein RGA4 [Cucumis melo]	[more]
TYK10208.1	8.67e-56	83.48	putative disease resistance protein RGA4 [Cucumis melo var. makuwa]	[more]
ARA91522.1	8.99e-56	83.48	CNL-I [Cucumis melo]	[more]
ARA91523.1	1.60e-55	85.22	CNL-III [Cucumis melo]	[more]

BLAST of Chy2G039360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14470.1	7.4e-17	41.88	NB-ARC domain-containing disease resistance protein	[more]
AT3G46530.1	6.7e-10	35.00	NB-ARC domain-containing disease resistance protein	[more]
AT3G46730.1	3.3e-09	32.23	NB-ARC domain-containing disease resistance protein	[more]
AT3G14460.1	9.7e-09	23.48	LRR and NB-ARC domains-containing disease resistance protein	[more]
AT3G50950.2	1.8e-07	33.04	HOPZ-ACTIVATED RESISTANCE 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..97 e-value: 2.4E-18 score: 68.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..116
IPR002182	NB-ARC	PFAM	PF00931	NB-ARC	coord: 1..118 e-value: 9.5E-20 score: 70.8
IPR044974	Disease resistance protein, plants	PANTHER	PTHR23155	DISEASE RESISTANCE PROTEIN RP	coord: 2..117
None	No IPR available	PANTHER	PTHR23155:SF941	OS06G0268500 PROTEIN	coord: 2..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G039360.1	Chy2G039360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0010960	magnesium ion homeostasis
molecular_function	GO:0043531	ADP binding