Chy2G039210 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G039210
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	ZnMc domain-containing protein
Location	chrH02: 16019456 .. 16020377 (+)
RNA-Seq Expression	Chy2G039210
Synteny	Chy2G039210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATCAGAAGATAACAACAACGATAGTGGTCATGATCACTACCACCACCTCTCCCATGTCGTACCACACTACAGTTTCTTCCCAGGAAGGCCTAGGTGGCCATCTACCAAATATCACTTAACATATGCGTTTCTTCCCGGCACTCGTGCACACGCAAAAGCACCGGTGGCACGAGCGTTCGCAACATGGGCTCGACATACACATTTTAAGTTTTCTTTGGCCACAAACTCTAGAAGAGCTGATTTGAAGATAGGGTTTTATAGAGGGAACCATGGAGATGGGTCCCCATTTGATGGGCCGGGGGGGACTTTGGCACATGCTTTTTCTCCAACTGATGGGAGATTTCATTATGTTTCAACAGAGAAATGGGTAGTTGGGGCAGTGAGAGGGAGATTCGATTTGCAAATAGTGGCTTTGCATGAGATTGGACATCTTCTTGGACTTGGGCATAGCACAATTAAAAATGCTATAATGTATCCTCATATAGAATCTGGGTCTACTAAAGGCTTGAATGCTGATGACATTAAAGGGATTGAGGTTTTATACAACATACCTTTACCCTAATTCAGAAGCCTTTTCAACAAAAGTTTTACAGTGTGTTGCATGTTTAAATAATAAGAATAATACTCGGGTGCAAAGAGGATTGTATCTGTGAAATGTAAGATTGATAAGCAACCTAAGATGCATGCAAGTATTTTTCTTTTTTCTGATATAGGGTACGTGTACGTGCAAAAGTTTCCTTTTAAGTCCTTCAATTTTCTATGTCACATATATCTAAATGTCTTCCTTTAATTTGATTATATTTTCAATGTCTTTGTTGGGTTGTTTTTCATTTACCTATTTGATCACATAAATTTCAAACCATTATATTGTTTGAAAATTTATATTATTAACTTATTTTATAGGGTATCATGAGTAA

mRNA sequence

ATGCTATCAGAAGATAACAACAACGATAGTGGTCATGATCACTACCACCACCTCTCCCATGTCGTACCACACTACAGTTTCTTCCCAGGAAGGCCTAGGTGGCCATCTACCAAATATCACTTAACATATGCGTTTCTTCCCGGCACTCGTGCACACGCAAAAGCACCGGTGGCACGAGCGTTCGCAACATGGGCTCGACATACACATTTTAAGTTTTCTTTGGCCACAAACTCTAGAAGAGCTGATTTGAAGATAGGGTTTTATAGAGGGAACCATGGAGATGGGTCCCCATTTGATGGGCCGGGGGGGACTTTGGCACATGCTTTTTCTCCAACTGATGGGAGATTTCATTATGTTTCAACAGAGAAATGGGTAGTTGGGGCAGTGAGAGGGAGATTCGATTTGCAAATAGTGGCTTTGCATGAGATTGGACATCTTCTTGGACTTGGGCATAGCACAATTAAAAATGCTATAATGTATCCTCATATAGAATCTGGGTCTACTAAAGGCTTGAATGCTGATGACATTAAAGGGATTGAGGGTACGTGGTATCATGAGTAA

Coding sequence (CDS)

ATGCTATCAGAAGATAACAACAACGATAGTGGTCATGATCACTACCACCACCTCTCCCATGTCGTACCACACTACAGTTTCTTCCCAGGAAGGCCTAGGTGGCCATCTACCAAATATCACTTAACATATGCGTTTCTTCCCGGCACTCGTGCACACGCAAAAGCACCGGTGGCACGAGCGTTCGCAACATGGGCTCGACATACACATTTTAAGTTTTCTTTGGCCACAAACTCTAGAAGAGCTGATTTGAAGATAGGGTTTTATAGAGGGAACCATGGAGATGGGTCCCCATTTGATGGGCCGGGGGGGACTTTGGCACATGCTTTTTCTCCAACTGATGGGAGATTTCATTATGTTTCAACAGAGAAATGGGTAGTTGGGGCAGTGAGAGGGAGATTCGATTTGCAAATAGTGGCTTTGCATGAGATTGGACATCTTCTTGGACTTGGGCATAGCACAATTAAAAATGCTATAATGTATCCTCATATAGAATCTGGGTCTACTAAAGGCTTGAATGCTGATGACATTAAAGGGATTGAGGGTACGTGGTATCATGAGTAA

Protein sequence

MLSEDNNNDSGHDHYHHLSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVARAFATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVVGAVRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKGIEGTWYHE*

Homology

[Close]

BLAST of Chy2G039210 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-39
Identity = 83/172 (48.26%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 20  HVVPHYSFFPGRPRWPSTKYHLTYAFLP--GTRAHAKAPVARAFATWARHTHFKFSLATN 79
           H V HYSFFPG PRWP  +  LTYAF P        K+  +RAF  W   T   F+    
Sbjct: 154 HAVKHYSFFPGEPRWPRNRRDLTYAFDPRNALTEEVKSVFSRAFTRWEEVTPLTFTRVER 213

Query: 80  SRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVVG--------AV 139
              +D+ IGFY G HGDG PFDGP  TLAHAFSP  G FH    E W+V         +V
Sbjct: 214 FSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISV 273

Query: 140 RGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTK-GLNADDIKGIE 181
               DL+ VA+HEIGHLLGLGHS+++ +IMYP I +G  K  L  DD++G++
Sbjct: 274 SEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQ 325

[Close]

BLAST of Chy2G039210 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.4e-39
Identity = 83/171 (48.54%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 20  HVVPHYSFFPGRPRWPSTKYHLTYAFLPGT--RAHAKAPVARAFATWARHTHFKFSLATN 79
           H V  Y+ FPG PRWP  +  LTYAF P        K+  +RAF  W+  T   F+L+ +
Sbjct: 150 HAVKRYTLFPGEPRWPRNRRDLTYAFDPKNPLTEEVKSVFSRAFGRWSDVTALNFTLSES 209

Query: 80  SRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVVG-------AVR 139
              +D+ IGFY G+HGDG PFDG  GTLAHAFSP  G+FH  + E WVV        +V 
Sbjct: 210 FSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVT 269

Query: 140 GRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTK-GLNADDIKGIE 181
              DL+ VA+HEIGHLLGLGHS+++ +IMYP I +G  K  L  DD++GI+
Sbjct: 270 AAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQ 320

[Close]

BLAST of Chy2G039210 vs. ExPASy Swiss-Prot
Match: Q9ZUJ5 (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.4e-37
Identity = 83/168 (49.40%), Postives = 102/168 (60.71%), Query Frame = 0


Query: 25  YSFFPGRPRWPSTKYHLTYAFLPGTRA--HAKAPVARAFATWARHTHFKFSLATNSRRAD 84
           YSFFPG+PRWP  K  LTYAF P        K   +RAF  WA  T   F+ + +  RAD
Sbjct: 143 YSFFPGKPRWPKRKRDLTYAFAPQNNLTDEVKRVFSRAFTRWAEVTPLNFTRSESILRAD 202

Query: 85  LKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVV--GAVRGRF------- 144
           + IGF+ G HGDG PFDG  GTLAHA SP  G  H    E W++  G +  R        
Sbjct: 203 IVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVV 262

Query: 145 DLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTK-GLNADDIKGIE 181
           DL+ VA+HEIGHLLGLGHS++++AIM+P I  G  K  L  DDI+GI+
Sbjct: 263 DLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQ 310

[Close]

BLAST of Chy2G039210 vs. ExPASy Swiss-Prot
Match: P29136 (Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-33
Identity = 80/168 (47.62%), Postives = 98/168 (58.33%), Query Frame = 0


Query: 21  VVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAH--AKAPVARAFATWARHTHFKFSLATNS 80
           ++  Y+FF   PRW +    LTYAF P  R     K+ +ARAF+ W    +  F   T+ 
Sbjct: 130 MISDYTFFKDMPRWQAGTTQLTYAFSPEPRLDDTFKSAIARAFSKWTPVVNIAFQETTSY 189

Query: 81  RRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVVGA------VRGR 140
             A++KI F   NHGD  PFDGPGG L HAF+PTDGR H+ + E WV         V   
Sbjct: 190 ETANIKILFASKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVTSA 249

Query: 141 FDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTK-GLNADDIKGI 180
           FDL+ VA+HEIGHLLGLGHS+   AIMYP I   + K  L  DDI GI
Sbjct: 250 FDLESVAVHEIGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGI 297

[Close]

BLAST of Chy2G039210 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-31
Identity = 75/172 (43.60%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 20  HVVPHYSFFPGRPRWPSTKYHLTYAFLPG------TRAHAKAPVARAFATWARHTHFKFS 79
           H   HY++F G+P+W   +  LTYA          T    K    RAF+ W+      F 
Sbjct: 145 HTTAHYTYFNGKPKW--NRDTLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFE 204

Query: 80  LATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVV-----GA 139
              +   ADLKIGFY G+HGDG PFDG  GTLAHAF+P +GR H  + E W+V     G+
Sbjct: 205 EVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGS 264

Query: 140 VRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTK-GLNADDIKGI 180
                DL+ VA HEIGHLLGLGHS+ ++A+MYP +   + K  L  DD+ G+
Sbjct: 265 SEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGV 314

[Close]

BLAST of Chy2G039210 vs. ExPASy TrEMBL
Match: A0A0A0M032 (ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G654840 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.2e-88
Identity = 157/180 (87.22%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MLSEDNNNDSGHDHYHHLSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVARA 60
           ML E+NNNDS HDHYH LSH VPHYSFFPGRPRWP TKYHLTY FLP T A AKAPV RA
Sbjct: 128 MLLENNNNDSSHDHYHQLSHAVPHYSFFPGRPRWPPTKYHLTYEFLPNTHADAKAPVTRA 187

Query: 61  FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVS 120
           FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDG PFDG GGTLAHAF+PTDGR H+ S
Sbjct: 188 FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGYPFDGSGGTLAHAFTPTDGRVHFDS 247

Query: 121 TEKWVVGAVRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKGIE 180
           TEKWVVGAVRGRFDL+ VALHEIGHLLGLGHS +KNAIMYP IESGSTKGLNADDI+GIE
Sbjct: 248 TEKWVVGAVRGRFDLETVALHEIGHLLGLGHSRVKNAIMYPTIESGSTKGLNADDIEGIE 307

[Close]

BLAST of Chy2G039210 vs. ExPASy TrEMBL
Match: A0A5A7T4D6 (Metalloendoproteinase 2-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00410 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85
Identity = 154/180 (85.56%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MLSEDNNNDSGHDHYHHLSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVARA 60
           MLSE NNNDS HDH HHL H V HY+FFPGR RWPSTKY LTYAFLPGTRA AKAPV RA
Sbjct: 129 MLSEHNNNDSSHDH-HHLPHAVSHYAFFPGRRRWPSTKYRLTYAFLPGTRADAKAPVTRA 188

Query: 61  FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVS 120
           FATWAR+THFKFSL TN RRADLKIGFYRGNHGDG PFDGPGGTLAHAF+PTDGRFHY S
Sbjct: 189 FATWARNTHFKFSLITNYRRADLKIGFYRGNHGDGYPFDGPGGTLAHAFAPTDGRFHYDS 248

Query: 121 TEKWVVGAVRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKGIE 180
           TEKW VGAV+GR+DLQ VALHEIGHLLGLGHST++NAIMYP+I SGSTKGLNADDIKGI+
Sbjct: 249 TEKWAVGAVKGRYDLQTVALHEIGHLLGLGHSTVRNAIMYPYIRSGSTKGLNADDIKGIK 307

[Close]

BLAST of Chy2G039210 vs. ExPASy TrEMBL
Match: A0A1S3B8J8 (metalloendoproteinase 2-MMP-like OS=Cucumis melo OX=3656 GN=LOC103487215 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85
Identity = 154/180 (85.56%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MLSEDNNNDSGHDHYHHLSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVARA 60
           MLSE NNNDS HDH HHL H V HY+FFPGR RWPSTKY LTYAFLPGTRA AKAPV RA
Sbjct: 129 MLSEHNNNDSSHDH-HHLPHAVSHYAFFPGRRRWPSTKYRLTYAFLPGTRADAKAPVTRA 188

Query: 61  FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVS 120
           FATWAR+THFKFSL TN RRADLKIGFYRGNHGDG PFDGPGGTLAHAF+PTDGRFHY S
Sbjct: 189 FATWARNTHFKFSLITNYRRADLKIGFYRGNHGDGYPFDGPGGTLAHAFAPTDGRFHYDS 248

Query: 121 TEKWVVGAVRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKGIE 180
           TEKW VGAV+GR+DLQ VALHEIGHLLGLGHST++NAIMYP+I SGSTKGLNADDIKGI+
Sbjct: 249 TEKWAVGAVKGRYDLQTVALHEIGHLLGLGHSTVRNAIMYPYIRSGSTKGLNADDIKGIK 307

[Close]

BLAST of Chy2G039210 vs. ExPASy TrEMBL
Match: A0A0A0M0J6 (ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G654860 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.8e-84
Identity = 153/180 (85.00%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MLSEDNNNDSGHDHYHHLSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVARA 60
           MLSED +N S HDH HHL H V HY+FFPGR RWPSTKY LTYAFLPGTRA AKAPVARA
Sbjct: 130 MLSEDIDNVSSHDH-HHLPHAVSHYAFFPGRLRWPSTKYRLTYAFLPGTRADAKAPVARA 189

Query: 61  FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVS 120
           FATWAR+THFKF+L TN RRADLKIGFYRGNHGDG PFDGPGGTLAHAF+PTDGRFHY S
Sbjct: 190 FATWARNTHFKFTLVTNYRRADLKIGFYRGNHGDGYPFDGPGGTLAHAFAPTDGRFHYDS 249

Query: 121 TEKWVVGAVRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKGIE 180
           TEKW VGAVRGR+DLQ VALHEIGHLLGLGHST+KNAIMYP+I+SGSTKGLN DDIKGI+
Sbjct: 250 TEKWAVGAVRGRYDLQTVALHEIGHLLGLGHSTVKNAIMYPYIKSGSTKGLNVDDIKGIK 308

[Close]

BLAST of Chy2G039210 vs. ExPASy TrEMBL
Match: A0A6J1H9F9 (metalloendoproteinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111461758 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.4e-80
Identity = 141/174 (81.03%), Postives = 159/174 (91.38%), Query Frame = 0


Query: 7   NNDSGHDHYHHLSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVARAFATWAR 66
           ++D GH H +HLSHVV HY+FFPG+ RWPS+KY LTYAFLPGTR  AKAPV RAFATWAR
Sbjct: 141 HDDDGHVHRYHLSHVVSHYAFFPGKRRWPSSKYRLTYAFLPGTRKDAKAPVTRAFATWAR 200

Query: 67  HTHFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVV 126
           +THFKFSL TN +RA+LKIGFY+GNHGDG PFDGPGGTLAHAF+PTDGRFHY STEKW V
Sbjct: 201 YTHFKFSLTTNYKRANLKIGFYKGNHGDGYPFDGPGGTLAHAFAPTDGRFHYDSTEKWAV 260

Query: 127 GAVRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKGIE 181
           GAV+GR+DLQ VALHEIGHLLGLGHST+KNAIMYP+I+SG+TKGLNADDIKGI+
Sbjct: 261 GAVKGRYDLQTVALHEIGHLLGLGHSTVKNAIMYPYIKSGTTKGLNADDIKGIK 314

[Close]

BLAST of Chy2G039210 vs. NCBI nr
Match: XP_004139163.1 (metalloendoproteinase 5-MMP [Cucumis sativus] >KGN66654.1 hypothetical protein Csa_007694 [Cucumis sativus])

HSP 1 Score: 333 bits (853), Expect = 1.92e-112
Identity = 157/180 (87.22%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MLSEDNNNDSGHDHYHHLSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVARA 60
           ML E+NNNDS HDHYH LSH VPHYSFFPGRPRWP TKYHLTY FLP T A AKAPV RA
Sbjct: 128 MLLENNNNDSSHDHYHQLSHAVPHYSFFPGRPRWPPTKYHLTYEFLPNTHADAKAPVTRA 187

Query: 61  FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVS 120
           FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDG PFDG GGTLAHAF+PTDGR H+ S
Sbjct: 188 FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGYPFDGSGGTLAHAFTPTDGRVHFDS 247

Query: 121 TEKWVVGAVRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKGIE 180
           TEKWVVGAVRGRFDL+ VALHEIGHLLGLGHS +KNAIMYP IESGSTKGLNADDI+GIE
Sbjct: 248 TEKWVVGAVRGRFDLETVALHEIGHLLGLGHSRVKNAIMYPTIESGSTKGLNADDIEGIE 307

[Close]

BLAST of Chy2G039210 vs. NCBI nr
Match: XP_008443669.1 (PREDICTED: metalloendoproteinase 2-MMP-like [Cucumis melo] >KAA0038230.1 metalloendoproteinase 2-MMP-like [Cucumis melo var. makuwa] >TYK30625.1 metalloendoproteinase 2-MMP-like [Cucumis melo var. makuwa])

HSP 1 Score: 324 bits (831), Expect = 3.98e-109
Identity = 154/180 (85.56%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MLSEDNNNDSGHDHYHHLSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVARA 60
           MLSE NNNDS HDH HHL H V HY+FFPGR RWPSTKY LTYAFLPGTRA AKAPV RA
Sbjct: 129 MLSEHNNNDSSHDH-HHLPHAVSHYAFFPGRRRWPSTKYRLTYAFLPGTRADAKAPVTRA 188

Query: 61  FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVS 120
           FATWAR+THFKFSL TN RRADLKIGFYRGNHGDG PFDGPGGTLAHAF+PTDGRFHY S
Sbjct: 189 FATWARNTHFKFSLITNYRRADLKIGFYRGNHGDGYPFDGPGGTLAHAFAPTDGRFHYDS 248

Query: 121 TEKWVVGAVRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKGIE 180
           TEKW VGAV+GR+DLQ VALHEIGHLLGLGHST++NAIMYP+I SGSTKGLNADDIKGI+
Sbjct: 249 TEKWAVGAVKGRYDLQTVALHEIGHLLGLGHSTVRNAIMYPYIRSGSTKGLNADDIKGIK 307

[Close]

BLAST of Chy2G039210 vs. NCBI nr
Match: XP_004139164.1 (metalloendoproteinase 3-MMP [Cucumis sativus] >KGN66657.1 hypothetical protein Csa_007261 [Cucumis sativus])

HSP 1 Score: 320 bits (819), Expect = 2.74e-107
Identity = 153/180 (85.00%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MLSEDNNNDSGHDHYHHLSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVARA 60
           MLSED +N S HDH HHL H V HY+FFPGR RWPSTKY LTYAFLPGTRA AKAPVARA
Sbjct: 130 MLSEDIDNVSSHDH-HHLPHAVSHYAFFPGRLRWPSTKYRLTYAFLPGTRADAKAPVARA 189

Query: 61  FATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVS 120
           FATWAR+THFKF+L TN RRADLKIGFYRGNHGDG PFDGPGGTLAHAF+PTDGRFHY S
Sbjct: 190 FATWARNTHFKFTLVTNYRRADLKIGFYRGNHGDGYPFDGPGGTLAHAFAPTDGRFHYDS 249

Query: 121 TEKWVVGAVRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKGIE 180
           TEKW VGAVRGR+DLQ VALHEIGHLLGLGHST+KNAIMYP+I+SGSTKGLN DDIKGI+
Sbjct: 250 TEKWAVGAVRGRYDLQTVALHEIGHLLGLGHSTVKNAIMYPYIKSGSTKGLNVDDIKGIK 308

[Close]

BLAST of Chy2G039210 vs. NCBI nr
Match: XP_038880397.1 (metalloendoproteinase 1-like [Benincasa hispida])

HSP 1 Score: 318 bits (815), Expect = 1.19e-106
Identity = 153/182 (84.07%), Postives = 166/182 (91.21%), Query Frame = 0


Query: 1   MLSE-DNNNDSGHDHYHH-LSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVA 60
           MLSE DN+NDS HDH+HH L H V HY+FFPGR RWPSTKY LTYAFLPGTRA AKAPVA
Sbjct: 129 MLSEHDNDNDSEHDHHHHHLPHAVSHYAFFPGRRRWPSTKYRLTYAFLPGTRADAKAPVA 188

Query: 61  RAFATWARHTHFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHY 120
           RAFATWAR+THFKFSLATN RRADLKIGFY GNHGDG PFDGPGGTLAHAF+PTDGRFHY
Sbjct: 189 RAFATWARNTHFKFSLATNYRRADLKIGFYGGNHGDGYPFDGPGGTLAHAFAPTDGRFHY 248

Query: 121 VSTEKWVVGAVRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKG 180
            STEKW VGAV+GR+DLQ VALHEIGHLLGLGHS ++NAIMYP+I+SG+TKGLNADDIKG
Sbjct: 249 DSTEKWAVGAVKGRYDLQTVALHEIGHLLGLGHSNVRNAIMYPYIKSGTTKGLNADDIKG 308

[Close]

BLAST of Chy2G039210 vs. NCBI nr
Match: XP_022961167.1 (metalloendoproteinase 1-like [Cucurbita moschata])

HSP 1 Score: 306 bits (783), Expect = 9.87e-102
Identity = 141/172 (81.98%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 9   DSGHDHYHHLSHVVPHYSFFPGRPRWPSTKYHLTYAFLPGTRAHAKAPVARAFATWARHT 68
           D GH H +HLSHVV HY+FFPG+ RWPS+KY LTYAFLPGTR  AKAPV RAFATWAR+T
Sbjct: 143 DDGHVHRYHLSHVVSHYAFFPGKRRWPSSKYRLTYAFLPGTRKDAKAPVTRAFATWARYT 202

Query: 69  HFKFSLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVVGA 128
           HFKFSL TN +RA+LKIGFY+GNHGDG PFDGPGGTLAHAF+PTDGRFHY STEKW VGA
Sbjct: 203 HFKFSLTTNYKRANLKIGFYKGNHGDGYPFDGPGGTLAHAFAPTDGRFHYDSTEKWAVGA 262

Query: 129 VRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTKGLNADDIKGIE 180
           V+GR+DLQ VALHEIGHLLGLGHST+KNAIMYP+I+SG+TKGLNADDIKGI+
Sbjct: 263 VKGRYDLQTVALHEIGHLLGLGHSTVKNAIMYPYIKSGTTKGLNADDIKGIK 314

[Close]

BLAST of Chy2G039210 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein )

HSP 1 Score: 164.5 bits (415), Expect = 8.4e-41
Identity = 83/172 (48.26%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 20  HVVPHYSFFPGRPRWPSTKYHLTYAFLP--GTRAHAKAPVARAFATWARHTHFKFSLATN 79
           H V HYSFFPG PRWP  +  LTYAF P        K+  +RAF  W   T   F+    
Sbjct: 154 HAVKHYSFFPGEPRWPRNRRDLTYAFDPRNALTEEVKSVFSRAFTRWEEVTPLTFTRVER 213

Query: 80  SRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVVG--------AV 139
              +D+ IGFY G HGDG PFDGP  TLAHAFSP  G FH    E W+V         +V
Sbjct: 214 FSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISV 273

Query: 140 RGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTK-GLNADDIKGIE 181
               DL+ VA+HEIGHLLGLGHS+++ +IMYP I +G  K  L  DD++G++
Sbjct: 274 SEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQ 325

[Close]

BLAST of Chy2G039210 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase )

HSP 1 Score: 162.9 bits (411), Expect = 2.4e-40
Identity = 83/171 (48.54%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 20  HVVPHYSFFPGRPRWPSTKYHLTYAFLPGT--RAHAKAPVARAFATWARHTHFKFSLATN 79
           H V  Y+ FPG PRWP  +  LTYAF P        K+  +RAF  W+  T   F+L+ +
Sbjct: 150 HAVKRYTLFPGEPRWPRNRRDLTYAFDPKNPLTEEVKSVFSRAFGRWSDVTALNFTLSES 209

Query: 80  SRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVVG-------AVR 139
              +D+ IGFY G+HGDG PFDG  GTLAHAFSP  G+FH  + E WVV        +V 
Sbjct: 210 FSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVT 269

Query: 140 GRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTK-GLNADDIKGIE 181
              DL+ VA+HEIGHLLGLGHS+++ +IMYP I +G  K  L  DD++GI+
Sbjct: 270 AAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQ 320

[Close]

BLAST of Chy2G039210 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein )

HSP 1 Score: 154.8 bits (390), Expect = 6.6e-38
Identity = 83/168 (49.40%), Postives = 102/168 (60.71%), Query Frame = 0


Query: 25  YSFFPGRPRWPSTKYHLTYAFLPGTRA--HAKAPVARAFATWARHTHFKFSLATNSRRAD 84
           YSFFPG+PRWP  K  LTYAF P        K   +RAF  WA  T   F+ + +  RAD
Sbjct: 143 YSFFPGKPRWPKRKRDLTYAFAPQNNLTDEVKRVFSRAFTRWAEVTPLNFTRSESILRAD 202

Query: 85  LKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVV--GAVRGRF------- 144
           + IGF+ G HGDG PFDG  GTLAHA SP  G  H    E W++  G +  R        
Sbjct: 203 IVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVV 262

Query: 145 DLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTK-GLNADDIKGIE 181
           DL+ VA+HEIGHLLGLGHS++++AIM+P I  G  K  L  DDI+GI+
Sbjct: 263 DLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQ 310

[Close]

BLAST of Chy2G039210 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-32
Identity = 75/172 (43.60%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 20  HVVPHYSFFPGRPRWPSTKYHLTYAFLPG------TRAHAKAPVARAFATWARHTHFKFS 79
           H   HY++F G+P+W   +  LTYA          T    K    RAF+ W+      F 
Sbjct: 145 HTTAHYTYFNGKPKW--NRDTLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFE 204

Query: 80  LATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVV-----GA 139
              +   ADLKIGFY G+HGDG PFDG  GTLAHAF+P +GR H  + E W+V     G+
Sbjct: 205 EVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGS 264

Query: 140 VRGRFDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTK-GLNADDIKGI 180
                DL+ VA HEIGHLLGLGHS+ ++A+MYP +   + K  L  DD+ G+
Sbjct: 265 SEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGV 314

[Close]

BLAST of Chy2G039210 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein )

HSP 1 Score: 136.3 bits (342), Expect = 2.4e-32
Identity = 77/176 (43.75%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 20  HVVPHYSFFPGRPRWP-STKYHLTYAFLPGTRAHAKAPV------ARAFATWARHTHFKF 79
           H    Y +FPGRPRW       LTYAF         AP        RAF  WA      F
Sbjct: 120 HTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSF 179

Query: 80  SLATNSRRADLKIGFYRGNHGDGSPFDGPGGTLAHAFSPTDGRFHYVSTEKWVVGAVRGR 139
               +   AD+KIGF+ G+HGDG PFDG  G LAH FSP +GR H    E W V     +
Sbjct: 180 IETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEK 239

Query: 140 ----FDLQIVALHEIGHLLGLGHSTIKNAIMYPHIESGSTK-GLNADDIKGIEGTW 184
                DL+ VA+HEIGH+LGLGHS++K+A MYP ++  S K  LN DD+ G++  +
Sbjct: 240 SSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

The following BLAST results are available for this feature:

BLAST of Chy2G039210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XF51	1.2e-39	48.26	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1	[more]
O04529	3.4e-39	48.54	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
Q9ZUJ5	9.4e-37	49.40	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1	[more]
P29136	1.3e-33	47.62	Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2	[more]
O23507	2.0e-31	43.60	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1	[more]

BLAST of Chy2G039210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M032	4.2e-88	87.22	ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G654840 PE=3 S...	[more]
A0A5A7T4D6	1.9e-85	85.56	Metalloendoproteinase 2-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3B8J8	1.9e-85	85.56	metalloendoproteinase 2-MMP-like OS=Cucumis melo OX=3656 GN=LOC103487215 PE=3 SV...	[more]
A0A0A0M0J6	4.8e-84	85.00	ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G654860 PE=3 S...	[more]
A0A6J1H9F9	5.4e-80	81.03	metalloendoproteinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111461758 PE=3 ...	[more]

BLAST of Chy2G039210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139163.1	1.92e-112	87.22	metalloendoproteinase 5-MMP [Cucumis sativus] >KGN66654.1 hypothetical protein C...	[more]
XP_008443669.1	3.98e-109	85.56	PREDICTED: metalloendoproteinase 2-MMP-like [Cucumis melo] >KAA0038230.1 metallo...	[more]
XP_004139164.1	2.74e-107	85.00	metalloendoproteinase 3-MMP [Cucumis sativus] >KGN66657.1 hypothetical protein C...	[more]
XP_038880397.1	1.19e-106	84.07	metalloendoproteinase 1-like [Benincasa hispida]	[more]
XP_022961167.1	9.87e-102	81.98	metalloendoproteinase 1-like [Cucurbita moschata]	[more]

BLAST of Chy2G039210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24140.1	8.4e-41	48.26	Matrixin family protein	[more]
AT1G70170.1	2.4e-40	48.54	matrix metalloproteinase	[more]
AT1G59970.1	6.6e-38	49.40	Matrixin family protein	[more]
AT4G16640.1	1.4e-32	43.60	Matrixin family protein	[more]
AT2G45040.1	2.4e-32	43.75	Matrixin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 138..163 score: 57.41 coord: 57..72 score: 33.23 coord: 81..109 score: 62.36 coord: 171..184 score: 38.76
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 30..186 e-value: 1.3E-26 score: 104.4
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 34..180 e-value: 1.6E-41 score: 141.8
IPR024079	Metallopeptidase, catalytic domain superfamily	GENE3D	3.40.390.10	Collagenase (Catalytic Domain)	coord: 4..185 e-value: 6.9E-49 score: 168.5
None	No IPR available	PANTHER	PTHR10201:SF282	METALLOENDOPROTEINASE 3-MMP-LIKE	coord: 9..181
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 9..181
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 27..180
IPR033739	Peptidase M10A, catalytic domain	CDD	cd04278	ZnMc_MMP	coord: 33..179 e-value: 2.38861E-51 score: 160.447

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G039210.1	Chy2G039210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030574	collagen catabolic process
biological_process	GO:0030198	extracellular matrix organization
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity