Chy2G039060 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGGGCCATCGTGTAGTGAGTTTGGATGGAACGAAGAATATCAATGCATTATCGCAGAACGGGAGTTGTTTGATAGTTGGGTCAAGGTATTAATTTAACAATACAATTTTATGTACTTTAATAATCCCAATCATTAACTAATCTATCTGAACTATGTTTGTATAGAGTCATTCTGCAGCCAAAGGCCTTCTACATAAATCATTCCCATATTATGATGATCTGTCCTATGTCTTCAACAAAGATTGGGCAACAGGAGCACGCTCAGAGATCTTTGTTGATGTGGGTTCTAATGTGCAAACAATTTTAATGACAGTGTTCCCCTTGGTGATTCACATGATCAAGACATCCCAACGATGTATAGCCAAGGAGTGGATATGTCACTAGATGATATGTTAGGAATACGTGCAGATTGATCAAGTAAAGGAAGAAATTGTTCAAGTGGAAGTAAATGGAAACGAGGTGGCTAACATTATGAAACGGTAGAGGTGATCAAGAATACAATGAAATTTAGAAATGATCAATTAAAGGCAATTGTATTTTGGCCAAAAGAAAAGCGTGCAACAAAGGTCGAATTGTGTGCTGAAGTAGTGAAAAAACTGCAAGATATCCCTGAACTATAGAGCCGAGTGAGGGCAAAGTTTATGCAA ATGAGGGGGCCATCGTGTAGTGAGTTTGGATGGAACGAAGAATATCAATGCATTATCGCAGAACGGGAGTTGTTTGATAGTTGGGTCAAGGTATTAAAAGATTGGGCAACAGGAGCACGCTCAGAGATCTTTGTTGATGTGGGTTCTAATGTGCAAACAATTTTAATGACAGTGTTCCCCTTGATTGATCAAGTAAAGGAAGAAATTGTTCAAGTGGAAGTAAATGGAAACGAGGCAATTGTATTTTGGCCAAAAGAAAAGCGTGCAACAAAGGTCGAATTGTGTGCTGAAGTAGTGAAAAAACTGCAAGATATCCCTGAACTATAGAGCCGAGTGAGGGCAAAGTTTATGCAA ATGAGGGGGCCATCGTGTAGTGAGTTTGGATGGAACGAAGAATATCAATGCATTATCGCAGAACGGGAGTTGTTTGATAGTTGGGTCAAGGTATTAAAAGATTGGGCAACAGGAGCACGCTCAGAGATCTTTGTTGATGTGGGTTCTAATGTGCAAACAATTTTAATGACAGTGTTCCCCTTGATTGATCAAGTAAAGGAAGAAATTGTTCAAGTGGAAGTAAATGGAAACGAGGCAATTGTATTTTGGCCAAAAGAAAAGCGTGCAACAAAGGTCGAATTGTGTGCTGAAGTAGTGAAAAAACTGCAAGATATCCCTGAACTATAGAGCCGAGTGAGGGCAAAGTTTATGCAA MRGPSCSEFGWNEEYQCIIAERELFDSWVKVLKDWATGARSEIFVDVGSNVQTILMTVFPLIDQVKEEIVQVEVNGNEAIVFWPKEKRATKVELCAEVVKKLQDIPEL*SRVRAKFMQ Homology
BLAST of Chy2G039060 vs. ExPASy TrEMBL
Match: A0A0A0M343 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G651700 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.0e-35 Identity = 83/123 (67.48%), Postives = 96/123 (78.05%), Query Frame = 0
BLAST of Chy2G039060 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 9.2e-25 Identity = 79/166 (47.59%), Postives = 91/166 (54.82%), Query Frame = 0
BLAST of Chy2G039060 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.7e-21 Identity = 79/191 (41.36%), Postives = 91/191 (47.64%), Query Frame = 0
BLAST of Chy2G039060 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.7e-21 Identity = 79/191 (41.36%), Postives = 91/191 (47.64%), Query Frame = 0
BLAST of Chy2G039060 vs. ExPASy TrEMBL
Match: A0A5D3D8J6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold307G00030 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 9.2e-17 Identity = 57/119 (47.90%), Postives = 67/119 (56.30%), Query Frame = 0
BLAST of Chy2G039060 vs. NCBI nr
Match: KGN66636.1 (hypothetical protein Csa_007482 [Cucumis sativus]) HSP 1 Score: 155 bits (391), Expect = 4.11e-46 Identity = 83/123 (67.48%), Postives = 96/123 (78.05%), Query Frame = 0
BLAST of Chy2G039060 vs. NCBI nr
Match: KAA0062747.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 120 bits (300), Expect = 7.28e-29 Identity = 79/166 (47.59%), Postives = 91/166 (54.82%), Query Frame = 0
BLAST of Chy2G039060 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (268), Expect = 1.66e-25 Identity = 79/191 (41.36%), Postives = 91/191 (47.64%), Query Frame = 0
BLAST of Chy2G039060 vs. NCBI nr
Match: TYK19779.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 2.92e-19 Identity = 57/119 (47.90%), Postives = 67/119 (56.30%), Query Frame = 0
BLAST of Chy2G039060 vs. NCBI nr
Match: TYK07962.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 87.0 bits (214), Expect = 8.00e-19 Identity = 60/146 (41.10%), Postives = 74/146 (50.68%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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