Chy2G039000 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTAAAACACCCCTCACATTTGCCGCATCTCTCCCAAATCTCAAGTATAACATCGTAAATCCATCAACAACCTCCTCCCTCGACGTCTTGTCCTGCAGCTTCGCTTCACTTTCTCCTCCGCCATTTCTAAACTTTTCCCAATCATTCTCTCTCTCTCTCTTCCATGGCTTTACATTTCTCTCTCTCTCCTCCGTCGGTCAGATCGTCGCCGTCGTTTCCCTGCTGTGGAAGGCAGCCGATCGCCACACTTTCCGACTCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTCTCTCTAGTAGCAGAAGCATTGGTGTTTCTGGTGGGAATCGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGATACTTTCTGGCCCATTGTCAATGCCGCTGGTGATAAAACCGTTGTGCTCGACATGTACACCCAGTGGTTTGTGTTTCTATGTCTCCATATGTCTTTGTTTCTTAATTGTGCTGTTTCTAAGGTTACTGCATAGAATATGGTTTCGGATATGAATGTTCTTATAATTGTAGATTATTTCTGGTTTACTGATTTAGTTACGCGATGCTTATAGTAGAGTATGGATCTCGTGGTTTAAGAAATTGGAAAGAAACATTGGTTTCATTTAGGCTTCTGTCTGTCAAATGATCGTGAAATTTATTAAAGTAATTCCCCTACAAGTTGATGCCACTTTTTTTTTTCTTTTACTATGGAGTTTGACTTTGATTAAAAAATTATCATAGGAAGTCAGTTTGTTTTCTTCTTCTCCTTTACACAATAATGAGAACTTGAAAACTGGGTTTATATTTTTTTTTTCAACTTAATGTCCGAAATCTTTGGGACCGGTGTTCTTTAAACTTCGAGCGCATAAAGCGCAATAGTTTCTTGGGGCTTAATGCAAGGGGAAAAGAAGCGTGGGTTTTTTTTTTCCTGCGAGGCACATGATATATATAAACATACTACATTAAGATAGGAAAGAACGGTTGAAGTGGAAATGTGAAAAAGCAAACTTCTAATCCCAAAAAATTTTCATTTAGACTTGGTAAATTTGATTTTTTAGTTAATAAAGAAGGAAAAGTCCTAATTTTCTCTATTTTTTAAATAATAGAAAAAGCCCCAATGGAGAGTGTCTTATTTTGTGAGCATTGCCTTTTCAAGTAAGCCTTAAGCCTAGGCTCTCCCGGGAGGACATTTGGGGCAACATCAAGAGAAACTGTTTGAGGAGGCACATCTCACATTGAATGATTTTTTTCTAACATTGCAGTTTTGGGAACAATATACAGTTGTAACATCTGCTAAATAAGTTCAAGACTTTCCAATAATGGGTATTCTAGCTACTGGTTTAGTCAAATTATTTTTTATTGCAAAGTATTTGGCATCAAGTCTATTTTAAACTTGGGAGAAATTATTTGGTTAATTCACCGCAAGGTGGTTGAAAGTTTTTTTTCCGTTAAATATAGAGTTCATTGGATTATAATTTTTTCAAGAAGTGGGGATGGGAATTCAAACTTGTGGCCTCTTGATGAATGAGATGGATATGCTTTCAACTTGTTGAGTTATGCTTAGATTGACAACGTTGTTTAAGTACAAGCTACGTGATTGCTTGTGTCTTTTCCAATAACTTTGACATAGTTTTAATGTAATGTTTTCTGTCTCAAGCTATTTTACTTCATCGGGCTGTGCCAATTGGTGATGGTGCCTTCCTAATGGTGATATGGTTTTATCCTGGCGTGGGAGTTTTTAGGAAAGAAGATTTGTAAGAATGAGAAACTGGTTATCTAGAAACACAACAGGATAGTTTGTTTATTTTAGATATAACTTATCTTACCCAAAAAAAATACTAGATTTAACATATCAAGTAAAAGAAATAAATATCGATTTAACAAACCTCATACCACAACTTGGATAGAGAATAAACTTATTCGAATAATGTTATGTAACATAACGCAACTAAAAAGTGCTTTGCCTCTATGTTATGACCTTTTGATTTTTCTTTGCTTTCCTTTAGCTTTTAAAAAAATATTAATTTAGCTTTAGTAAGTTTAATTAGTACAAAAAGAGCCTTTGCCTTTGACAGCCTTATTTTCTGGTAGAATTTTTACTTTTGCCTTATTGTTTCTTGTAATAACCCAATCCTCATGACTGTGGTGATTAATTTTAGTTCGAAAAAAACTTTCCTTGTTTTGCTATATGCAATTTCAGACTGCTTGCGAGACTATGCATTTGTAAAAGTTCAAGATTCATTATTTATTGTCTCTGTTTTTGGACTCACAAGCTTAACACCTTAATTAACGTTCTTTATTCATCCCTACATGGTACATTAAAGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGATTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCTAGACAATAAGGTTCATATGTTCCCTAATTTCTTGCTGGAACTTAGGAATGTATTTTCGTAATAGTTCATATAAGAAGTAAGAACATTGAATTATCTTTATTTGGCAGCCATTGGCAAAGGAACTTGGTATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAAAAGGTTGTTAAAGAAGTAACTGGAGCAAAGTTTGATGAGTTGGTTCATGCCATTGATGCTGTAAGATCCAGCTGA ATGACTAAAACACCCCTCACATTTGCCGCATCTCTCCCAAATCTCAAATCGTCGCCGTCGTTTCCCTGCTGTGGAAGGCAGCCGATCGCCACACTTTCCGACTCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTCTCTCTAGTAGCAGAAGCATTGGTGTTTCTGGTGGGAATCGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGATACTTTCTGGCCCATTGTCAATGCCGCTGGTGATAAAACCGTTGTGCTCGACATGTACACCCAGTGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGATTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCTAGACAATAAGCCATTGGCAAAGGAACTTGGTATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAAAAGGTTGTTAAAGAAGTAACTGGAGCAAAGTTTGATGAGTTGGTTCATGCCATTGATGCTGTAAGATCCAGCTGA ATGACTAAAACACCCCTCACATTTGCCGCATCTCTCCCAAATCTCAAATCGTCGCCGTCGTTTCCCTGCTGTGGAAGGCAGCCGATCGCCACACTTTCCGACTCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTCTCTCTAGTAGCAGAAGCATTGGTGTTTCTGGTGGGAATCGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGATACTTTCTGGCCCATTGTCAATGCCGCTGGTGATAAAACCGTTGTGCTCGACATGTACACCCAGTGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGATTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCTAGACAATAAGCCATTGGCAAAGGAACTTGGTATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAAAAGGTTGTTAAAGAAGTAACTGGAGCAAAGTTTGATGAGTTGGTTCATGCCATTGATGCTGTAAGATCCAGCTGA MTKTPLTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS* Homology
BLAST of Chy2G039000 vs. ExPASy Swiss-Prot
Match: P29450 (Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.7e-51 Identity = 118/181 (65.19%), Postives = 137/181 (75.69%), Query Frame = 0
BLAST of Chy2G039000 vs. ExPASy Swiss-Prot
Match: Q9XFH9 (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 9.5e-50 Identity = 104/148 (70.27%), Postives = 117/148 (79.05%), Query Frame = 0
BLAST of Chy2G039000 vs. ExPASy Swiss-Prot
Match: Q9XFH8 (Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 SV=2) HSP 1 Score: 195.3 bits (495), Expect = 6.1e-49 Identity = 94/120 (78.33%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of Chy2G039000 vs. ExPASy Swiss-Prot
Match: O81332 (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 6.8e-48 Identity = 99/129 (76.74%), Postives = 110/129 (85.27%), Query Frame = 0
BLAST of Chy2G039000 vs. ExPASy Swiss-Prot
Match: Q8S091 (Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0913000 PE=2 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.0e-47 Identity = 97/128 (75.78%), Postives = 106/128 (82.81%), Query Frame = 0
BLAST of Chy2G039000 vs. ExPASy TrEMBL
Match: A0A0A0M340 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G651650 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.5e-85 Identity = 166/178 (93.26%), Postives = 172/178 (96.63%), Query Frame = 0
BLAST of Chy2G039000 vs. ExPASy TrEMBL
Match: A0A1S3B9B3 (thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84 Identity = 163/178 (91.57%), Postives = 170/178 (95.51%), Query Frame = 0
BLAST of Chy2G039000 vs. ExPASy TrEMBL
Match: A0A6J1DTK2 (thioredoxin F-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111023873 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.4e-80 Identity = 154/178 (86.52%), Postives = 168/178 (94.38%), Query Frame = 0
BLAST of Chy2G039000 vs. ExPASy TrEMBL
Match: A0A6J1JM96 (thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111485679 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 3.5e-79 Identity = 154/178 (86.52%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of Chy2G039000 vs. ExPASy TrEMBL
Match: A0A6J1HAM5 (thioredoxin F-type, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461638 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.8e-78 Identity = 152/178 (85.39%), Postives = 164/178 (92.13%), Query Frame = 0
BLAST of Chy2G039000 vs. NCBI nr
Match: XP_004139092.1 (thioredoxin F-type, chloroplastic [Cucumis sativus] >KGN66631.1 hypothetical protein Csa_007307 [Cucumis sativus]) HSP 1 Score: 322 bits (825), Expect = 2.97e-110 Identity = 166/178 (93.26%), Postives = 172/178 (96.63%), Query Frame = 0
BLAST of Chy2G039000 vs. NCBI nr
Match: XP_008443649.1 (PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo]) HSP 1 Score: 318 bits (816), Expect = 6.99e-109 Identity = 163/178 (91.57%), Postives = 170/178 (95.51%), Query Frame = 0
BLAST of Chy2G039000 vs. NCBI nr
Match: XP_022157062.1 (thioredoxin F-type, chloroplastic-like [Momordica charantia]) HSP 1 Score: 305 bits (780), Expect = 2.14e-103 Identity = 154/178 (86.52%), Postives = 168/178 (94.38%), Query Frame = 0
BLAST of Chy2G039000 vs. NCBI nr
Match: XP_038878300.1 (thioredoxin F-type, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 305 bits (781), Expect = 1.08e-102 Identity = 156/178 (87.64%), Postives = 166/178 (93.26%), Query Frame = 0
BLAST of Chy2G039000 vs. NCBI nr
Match: XP_022988428.1 (thioredoxin F-type, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 301 bits (770), Expect = 7.16e-102 Identity = 154/178 (86.52%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of Chy2G039000 vs. TAIR 10
Match: AT5G16400.1 (thioredoxin F2 ) HSP 1 Score: 198.0 bits (502), Expect = 6.7e-51 Identity = 104/148 (70.27%), Postives = 117/148 (79.05%), Query Frame = 0
BLAST of Chy2G039000 vs. TAIR 10
Match: AT3G02730.1 (thioredoxin F-type 1 ) HSP 1 Score: 195.3 bits (495), Expect = 4.4e-50 Identity = 94/120 (78.33%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of Chy2G039000 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 ) HSP 1 Score: 75.1 bits (183), Expect = 6.6e-14 Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of Chy2G039000 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 ) HSP 1 Score: 70.1 bits (170), Expect = 2.1e-12 Identity = 33/89 (37.08%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Chy2G039000 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 ) HSP 1 Score: 68.9 bits (167), Expect = 4.7e-12 Identity = 30/79 (37.97%), Postives = 53/79 (67.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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