Chy2G039000 (gene) Cucumber (hystrix) v1

Overview
NameChy2G039000
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionThioredoxin domain-containing protein
LocationchrH02: 15291555 .. 15294257 (+)
RNA-Seq ExpressionChy2G039000
SyntenyChy2G039000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTAAAACACCCCTCACATTTGCCGCATCTCTCCCAAATCTCAAGTATAACATCGTAAATCCATCAACAACCTCCTCCCTCGACGTCTTGTCCTGCAGCTTCGCTTCACTTTCTCCTCCGCCATTTCTAAACTTTTCCCAATCATTCTCTCTCTCTCTCTTCCATGGCTTTACATTTCTCTCTCTCTCCTCCGTCGGTCAGATCGTCGCCGTCGTTTCCCTGCTGTGGAAGGCAGCCGATCGCCACACTTTCCGACTCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTCTCTCTAGTAGCAGAAGCATTGGTGTTTCTGGTGGGAATCGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGATACTTTCTGGCCCATTGTCAATGCCGCTGGTGATAAAACCGTTGTGCTCGACATGTACACCCAGTGGTTTGTGTTTCTATGTCTCCATATGTCTTTGTTTCTTAATTGTGCTGTTTCTAAGGTTACTGCATAGAATATGGTTTCGGATATGAATGTTCTTATAATTGTAGATTATTTCTGGTTTACTGATTTAGTTACGCGATGCTTATAGTAGAGTATGGATCTCGTGGTTTAAGAAATTGGAAAGAAACATTGGTTTCATTTAGGCTTCTGTCTGTCAAATGATCGTGAAATTTATTAAAGTAATTCCCCTACAAGTTGATGCCACTTTTTTTTTTCTTTTACTATGGAGTTTGACTTTGATTAAAAAATTATCATAGGAAGTCAGTTTGTTTTCTTCTTCTCCTTTACACAATAATGAGAACTTGAAAACTGGGTTTATATTTTTTTTTTCAACTTAATGTCCGAAATCTTTGGGACCGGTGTTCTTTAAACTTCGAGCGCATAAAGCGCAATAGTTTCTTGGGGCTTAATGCAAGGGGAAAAGAAGCGTGGGTTTTTTTTTTCCTGCGAGGCACATGATATATATAAACATACTACATTAAGATAGGAAAGAACGGTTGAAGTGGAAATGTGAAAAAGCAAACTTCTAATCCCAAAAAATTTTCATTTAGACTTGGTAAATTTGATTTTTTAGTTAATAAAGAAGGAAAAGTCCTAATTTTCTCTATTTTTTAAATAATAGAAAAAGCCCCAATGGAGAGTGTCTTATTTTGTGAGCATTGCCTTTTCAAGTAAGCCTTAAGCCTAGGCTCTCCCGGGAGGACATTTGGGGCAACATCAAGAGAAACTGTTTGAGGAGGCACATCTCACATTGAATGATTTTTTTCTAACATTGCAGTTTTGGGAACAATATACAGTTGTAACATCTGCTAAATAAGTTCAAGACTTTCCAATAATGGGTATTCTAGCTACTGGTTTAGTCAAATTATTTTTTATTGCAAAGTATTTGGCATCAAGTCTATTTTAAACTTGGGAGAAATTATTTGGTTAATTCACCGCAAGGTGGTTGAAAGTTTTTTTTCCGTTAAATATAGAGTTCATTGGATTATAATTTTTTCAAGAAGTGGGGATGGGAATTCAAACTTGTGGCCTCTTGATGAATGAGATGGATATGCTTTCAACTTGTTGAGTTATGCTTAGATTGACAACGTTGTTTAAGTACAAGCTACGTGATTGCTTGTGTCTTTTCCAATAACTTTGACATAGTTTTAATGTAATGTTTTCTGTCTCAAGCTATTTTACTTCATCGGGCTGTGCCAATTGGTGATGGTGCCTTCCTAATGGTGATATGGTTTTATCCTGGCGTGGGAGTTTTTAGGAAAGAAGATTTGTAAGAATGAGAAACTGGTTATCTAGAAACACAACAGGATAGTTTGTTTATTTTAGATATAACTTATCTTACCCAAAAAAAATACTAGATTTAACATATCAAGTAAAAGAAATAAATATCGATTTAACAAACCTCATACCACAACTTGGATAGAGAATAAACTTATTCGAATAATGTTATGTAACATAACGCAACTAAAAAGTGCTTTGCCTCTATGTTATGACCTTTTGATTTTTCTTTGCTTTCCTTTAGCTTTTAAAAAAATATTAATTTAGCTTTAGTAAGTTTAATTAGTACAAAAAGAGCCTTTGCCTTTGACAGCCTTATTTTCTGGTAGAATTTTTACTTTTGCCTTATTGTTTCTTGTAATAACCCAATCCTCATGACTGTGGTGATTAATTTTAGTTCGAAAAAAACTTTCCTTGTTTTGCTATATGCAATTTCAGACTGCTTGCGAGACTATGCATTTGTAAAAGTTCAAGATTCATTATTTATTGTCTCTGTTTTTGGACTCACAAGCTTAACACCTTAATTAACGTTCTTTATTCATCCCTACATGGTACATTAAAGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGATTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCTAGACAATAAGGTTCATATGTTCCCTAATTTCTTGCTGGAACTTAGGAATGTATTTTCGTAATAGTTCATATAAGAAGTAAGAACATTGAATTATCTTTATTTGGCAGCCATTGGCAAAGGAACTTGGTATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAAAAGGTTGTTAAAGAAGTAACTGGAGCAAAGTTTGATGAGTTGGTTCATGCCATTGATGCTGTAAGATCCAGCTGA

mRNA sequence

ATGACTAAAACACCCCTCACATTTGCCGCATCTCTCCCAAATCTCAAATCGTCGCCGTCGTTTCCCTGCTGTGGAAGGCAGCCGATCGCCACACTTTCCGACTCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTCTCTCTAGTAGCAGAAGCATTGGTGTTTCTGGTGGGAATCGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGATACTTTCTGGCCCATTGTCAATGCCGCTGGTGATAAAACCGTTGTGCTCGACATGTACACCCAGTGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGATTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCTAGACAATAAGCCATTGGCAAAGGAACTTGGTATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAAAAGGTTGTTAAAGAAGTAACTGGAGCAAAGTTTGATGAGTTGGTTCATGCCATTGATGCTGTAAGATCCAGCTGA

Coding sequence (CDS)

ATGACTAAAACACCCCTCACATTTGCCGCATCTCTCCCAAATCTCAAATCGTCGCCGTCGTTTCCCTGCTGTGGAAGGCAGCCGATCGCCACACTTTCCGACTCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTCTCTCTAGTAGCAGAAGCATTGGTGTTTCTGGTGGGAATCGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGATACTTTCTGGCCCATTGTCAATGCCGCTGGTGATAAAACCGTTGTGCTCGACATGTACACCCAGTGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGATTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCTAGACAATAAGCCATTGGCAAAGGAACTTGGTATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAAAAGGTTGTTAAAGAAGTAACTGGAGCAAAGTTTGATGAGTTGGTTCATGCCATTGATGCTGTAAGATCCAGCTGA

Protein sequence

MTKTPLTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS*
Homology
BLAST of Chy2G039000 vs. ExPASy Swiss-Prot
Match: P29450 (Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-51
Identity = 118/181 (65.19%), Postives = 137/181 (75.69%), Query Frame = 0

Query: 14  NLKSSPSFPCCGRQPIATLSDSK---SGCFSSRSLSLS--SSRSIGVS----GGNRSFKV 73
           NL +SP +   G     + S SK   +  FS+ S S S   S+ +G+       + S  V
Sbjct: 4   NLCTSPKW--IGTTVFDSASSSKPSLASSFSTTSFSSSILCSKRVGLQRLSLRRSISVSV 63

Query: 74  NSSLETAG--ATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSE 133
            SSLETAG   TVG+VTEVNKDTFWPIVNAAGDKTVVLDM+T+WCGPCKV+AP +++LS+
Sbjct: 64  RSSLETAGPTVTVGKVTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLYEELSQ 123

Query: 134 KYLDVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRS 184
           KYLDVVFLKLDCN DNK LAKELGIKVVPTFKILKD K+VKEVTGAKFD+LV AID VRS
Sbjct: 124 KYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAIDTVRS 182

BLAST of Chy2G039000 vs. ExPASy Swiss-Prot
Match: Q9XFH9 (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.5e-50
Identity = 104/148 (70.27%), Postives = 117/148 (79.05%), Query Frame = 0

Query: 35  SKSGCFSSRSLSLSSSRSIGVSGGNRSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAG 94
           +K G  S     L S R IG      S  V  SLET   TVGQVTEV+KDTFWPIV AAG
Sbjct: 43  TKIGFCSGGGGVLDSGRRIG------SCVVRCSLETVNVTVGQVTEVDKDTFWPIVKAAG 102

Query: 95  DKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNLDNKPLAKELGIKVVPTFK 154
           DK VVLDMYTQWCGPCKV+APK+++LSEKY D+VFLKLDCN DNKPLAKELGI+VVPTFK
Sbjct: 103 DKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFK 162

Query: 155 ILKDKKVVKEVTGAKFDELVHAIDAVRS 183
           ILKD KVVKEVTGAK+++L+ AI+A RS
Sbjct: 163 ILKDNKVVKEVTGAKYEDLLAAIEAARS 184

BLAST of Chy2G039000 vs. ExPASy Swiss-Prot
Match: Q9XFH8 (Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 6.1e-49
Identity = 94/120 (78.33%), Postives = 106/120 (88.33%), Query Frame = 0

Query: 64  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 123
           V  SLET   +VGQVTEV+KDTFWPIV AAG+K VVLDMYTQWCGPCKV+APK++ LSEK
Sbjct: 56  VRCSLETVNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEK 115

Query: 124 YLDVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 183
           Y DVVFLKLDCN DN+PLAKELGI+VVPTFKILKD KVVKEVTGAK+D+LV AI+  RS+
Sbjct: 116 YDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETARSA 175

BLAST of Chy2G039000 vs. ExPASy Swiss-Prot
Match: O81332 (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.8e-48
Identity = 99/129 (76.74%), Postives = 110/129 (85.27%), Query Frame = 0

Query: 60  RSFKVNSSLETA-GA----TVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMA 119
           RS  V +SLETA GA     VG+VTEV+KDTFWPI N AGDK VVLDMYTQWCGPCKVMA
Sbjct: 63  RSCCVKASLETAVGAESETLVGKVTEVDKDTFWPIANGAGDKPVVLDMYTQWCGPCKVMA 122

Query: 120 PKFQDLSEKYLDVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELV 179
           PK+Q+L+EK LDVVFLKLDCN +NKPLAKELGI+VVPTFKILK  K+V EVTGAKFD+LV
Sbjct: 123 PKYQELAEKLLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKGGKIVDEVTGAKFDKLV 182

Query: 180 HAIDAVRSS 184
            AI+A RSS
Sbjct: 183 AAIEAARSS 191

BLAST of Chy2G039000 vs. ExPASy Swiss-Prot
Match: Q8S091 (Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0913000 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.0e-47
Identity = 97/128 (75.78%), Postives = 106/128 (82.81%), Query Frame = 0

Query: 56  SGGNRSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAP 115
           S G+ +  V +  E A A  GQVTEVNKDTFWPIV +AG K VVLDMYTQWCGPCKVMAP
Sbjct: 61  SSGSDTATVGAEAE-AVAVTGQVTEVNKDTFWPIVKSAGPKVVVLDMYTQWCGPCKVMAP 120

Query: 116 KFQDLSEKYLDVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVH 175
           KFQ++SEK  DVVFLKLDCN DNK LAKELGIKVVPTFKILKD KVVKEVTGAK DEL+ 
Sbjct: 121 KFQEMSEKDQDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDGKVVKEVTGAKLDELIQ 180

Query: 176 AIDAVRSS 184
           AI+ V+SS
Sbjct: 181 AIETVKSS 187

BLAST of Chy2G039000 vs. ExPASy TrEMBL
Match: A0A0A0M340 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G651650 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.5e-85
Identity = 166/178 (93.26%), Postives = 172/178 (96.63%), Query Frame = 0

Query: 6   LTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVN 65
           L F+ S P+++SSPSFPC GRQPIATLS+SKSGCFSSRSLSLSSSRSIGVSG N SFKVN
Sbjct: 3   LHFSLSPPSVRSSPSFPCSGRQPIATLSESKSGCFSSRSLSLSSSRSIGVSGRNGSFKVN 62

Query: 66  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 125
           SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL
Sbjct: 63  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 122

Query: 126 DVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 184
           DVVFLKLDCN+DNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS
Sbjct: 123 DVVFLKLDCNIDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 180

BLAST of Chy2G039000 vs. ExPASy TrEMBL
Match: A0A1S3B9B3 (thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84
Identity = 163/178 (91.57%), Postives = 170/178 (95.51%), Query Frame = 0

Query: 6   LTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVN 65
           L F+ S P+++SSPSFPC GRQPI  LSDSKSGCFSSRSLS+SSSRSIGVSGGNRSFKVN
Sbjct: 3   LHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFKVN 62

Query: 66  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 125
           SSLETAGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL
Sbjct: 63  SSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 122

Query: 126 DVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 184
           DVVFLKLDCN DNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFD+LVHAID VRSS
Sbjct: 123 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180

BLAST of Chy2G039000 vs. ExPASy TrEMBL
Match: A0A6J1DTK2 (thioredoxin F-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111023873 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.4e-80
Identity = 154/178 (86.52%), Postives = 168/178 (94.38%), Query Frame = 0

Query: 6   LTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVN 65
           L  + S P+++SSPS PC G+QPIA +SDSKS CFSSRSLS++SSRSIG+SGGNR+FKVN
Sbjct: 3   LRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFKVN 62

Query: 66  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 125
           SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQ+LSEKYL
Sbjct: 63  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEKYL 122

Query: 126 DVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 184
           DVVFLKLDCN DNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFD+LVHAI+AVRSS
Sbjct: 123 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180

BLAST of Chy2G039000 vs. ExPASy TrEMBL
Match: A0A6J1JM96 (thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111485679 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.5e-79
Identity = 154/178 (86.52%), Postives = 165/178 (92.70%), Query Frame = 0

Query: 6   LTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVN 65
           L  + S P+++SSPS PC GRQPIA LSD+KSGCFSS+ LS++SSRSIGVS GNRSFK+N
Sbjct: 3   LRISLSPPSIRSSPSLPCSGRQPIAALSDAKSGCFSSKRLSVTSSRSIGVSSGNRSFKIN 62

Query: 66  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 125
           SSLETAGATVG VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEKYL
Sbjct: 63  SSLETAGATVGTVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYL 122

Query: 126 DVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 184
           DVVFLKLDCN DNKPLAKELGIKVVPTFKILKDKKVVK VTGAKFD+LV AIDAVRSS
Sbjct: 123 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKVVTGAKFDDLVLAIDAVRSS 180

BLAST of Chy2G039000 vs. ExPASy TrEMBL
Match: A0A6J1HAM5 (thioredoxin F-type, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461638 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.8e-78
Identity = 152/178 (85.39%), Postives = 164/178 (92.13%), Query Frame = 0

Query: 6   LTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVN 65
           L  + S P+++SSPS PC GRQPIA L D+KSGCFSS+ LS++SSRSIGVS GNRSFK+N
Sbjct: 3   LRISLSPPSIRSSPSLPCSGRQPIAALPDAKSGCFSSKRLSVTSSRSIGVSSGNRSFKIN 62

Query: 66  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 125
           SSLE AGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEKYL
Sbjct: 63  SSLEIAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYL 122

Query: 126 DVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 184
           DVVFLKLDCN DNKPLAKELGIKVVPTFKILKDKKVVK VTGAKFD+LV AIDAVRSS
Sbjct: 123 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKVVTGAKFDDLVLAIDAVRSS 180

BLAST of Chy2G039000 vs. NCBI nr
Match: XP_004139092.1 (thioredoxin F-type, chloroplastic [Cucumis sativus] >KGN66631.1 hypothetical protein Csa_007307 [Cucumis sativus])

HSP 1 Score: 322 bits (825), Expect = 2.97e-110
Identity = 166/178 (93.26%), Postives = 172/178 (96.63%), Query Frame = 0

Query: 6   LTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVN 65
           L F+ S P+++SSPSFPC GRQPIATLS+SKSGCFSSRSLSLSSSRSIGVSG N SFKVN
Sbjct: 3   LHFSLSPPSVRSSPSFPCSGRQPIATLSESKSGCFSSRSLSLSSSRSIGVSGRNGSFKVN 62

Query: 66  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 125
           SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL
Sbjct: 63  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 122

Query: 126 DVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 183
           DVVFLKLDCN+DNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS
Sbjct: 123 DVVFLKLDCNIDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 180

BLAST of Chy2G039000 vs. NCBI nr
Match: XP_008443649.1 (PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo])

HSP 1 Score: 318 bits (816), Expect = 6.99e-109
Identity = 163/178 (91.57%), Postives = 170/178 (95.51%), Query Frame = 0

Query: 6   LTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVN 65
           L F+ S P+++SSPSFPC GRQPI  LSDSKSGCFSSRSLS+SSSRSIGVSGGNRSFKVN
Sbjct: 3   LHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFKVN 62

Query: 66  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 125
           SSLETAGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL
Sbjct: 63  SSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 122

Query: 126 DVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 183
           DVVFLKLDCN DNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFD+LVHAID VRSS
Sbjct: 123 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180

BLAST of Chy2G039000 vs. NCBI nr
Match: XP_022157062.1 (thioredoxin F-type, chloroplastic-like [Momordica charantia])

HSP 1 Score: 305 bits (780), Expect = 2.14e-103
Identity = 154/178 (86.52%), Postives = 168/178 (94.38%), Query Frame = 0

Query: 6   LTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVN 65
           L  + S P+++SSPS PC G+QPIA +SDSKS CFSSRSLS++SSRSIG+SGGNR+FKVN
Sbjct: 3   LRLSLSPPSIRSSPSLPCNGKQPIAAVSDSKSTCFSSRSLSVTSSRSIGISGGNRTFKVN 62

Query: 66  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 125
           SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPC+VMAPKFQ+LSEKYL
Sbjct: 63  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCRVMAPKFQELSEKYL 122

Query: 126 DVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 183
           DVVFLKLDCN DNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFD+LVHAI+AVRSS
Sbjct: 123 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIEAVRSS 180

BLAST of Chy2G039000 vs. NCBI nr
Match: XP_038878300.1 (thioredoxin F-type, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 305 bits (781), Expect = 1.08e-102
Identity = 156/178 (87.64%), Postives = 166/178 (93.26%), Query Frame = 0

Query: 6   LTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVN 65
           L  + S P+++SSPSFPC GRQ IA LSDSKSGCFSS+SLS++SSRSIGVS GNRSFKVN
Sbjct: 60  LHLSLSPPSVRSSPSFPCSGRQSIAALSDSKSGCFSSKSLSITSSRSIGVSSGNRSFKVN 119

Query: 66  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 125
           SSLE AGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEKYL
Sbjct: 120 SSLEIAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYL 179

Query: 126 DVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 183
           DVVFLKLDCN DNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFD+LVHAID VRSS
Sbjct: 180 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 237

BLAST of Chy2G039000 vs. NCBI nr
Match: XP_022988428.1 (thioredoxin F-type, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 301 bits (770), Expect = 7.16e-102
Identity = 154/178 (86.52%), Postives = 165/178 (92.70%), Query Frame = 0

Query: 6   LTFAASLPNLKSSPSFPCCGRQPIATLSDSKSGCFSSRSLSLSSSRSIGVSGGNRSFKVN 65
           L  + S P+++SSPS PC GRQPIA LSD+KSGCFSS+ LS++SSRSIGVS GNRSFK+N
Sbjct: 3   LRISLSPPSIRSSPSLPCSGRQPIAALSDAKSGCFSSKRLSVTSSRSIGVSSGNRSFKIN 62

Query: 66  SSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYL 125
           SSLETAGATVG VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEKYL
Sbjct: 63  SSLETAGATVGTVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYL 122

Query: 126 DVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 183
           DVVFLKLDCN DNKPLAKELGIKVVPTFKILKDKKVVK VTGAKFD+LV AIDAVRSS
Sbjct: 123 DVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKVVTGAKFDDLVLAIDAVRSS 180

BLAST of Chy2G039000 vs. TAIR 10
Match: AT5G16400.1 (thioredoxin F2 )

HSP 1 Score: 198.0 bits (502), Expect = 6.7e-51
Identity = 104/148 (70.27%), Postives = 117/148 (79.05%), Query Frame = 0

Query: 35  SKSGCFSSRSLSLSSSRSIGVSGGNRSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAG 94
           +K G  S     L S R IG      S  V  SLET   TVGQVTEV+KDTFWPIV AAG
Sbjct: 43  TKIGFCSGGGGVLDSGRRIG------SCVVRCSLETVNVTVGQVTEVDKDTFWPIVKAAG 102

Query: 95  DKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNLDNKPLAKELGIKVVPTFK 154
           DK VVLDMYTQWCGPCKV+APK+++LSEKY D+VFLKLDCN DNKPLAKELGI+VVPTFK
Sbjct: 103 DKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFK 162

Query: 155 ILKDKKVVKEVTGAKFDELVHAIDAVRS 183
           ILKD KVVKEVTGAK+++L+ AI+A RS
Sbjct: 163 ILKDNKVVKEVTGAKYEDLLAAIEAARS 184

BLAST of Chy2G039000 vs. TAIR 10
Match: AT3G02730.1 (thioredoxin F-type 1 )

HSP 1 Score: 195.3 bits (495), Expect = 4.4e-50
Identity = 94/120 (78.33%), Postives = 106/120 (88.33%), Query Frame = 0

Query: 64  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 123
           V  SLET   +VGQVTEV+KDTFWPIV AAG+K VVLDMYTQWCGPCKV+APK++ LSEK
Sbjct: 56  VRCSLETVNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEK 115

Query: 124 YLDVVFLKLDCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 183
           Y DVVFLKLDCN DN+PLAKELGI+VVPTFKILKD KVVKEVTGAK+D+LV AI+  RS+
Sbjct: 116 YDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETARSA 175

BLAST of Chy2G039000 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 75.1 bits (183), Expect = 6.6e-14
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 0

Query: 76  GQVTEVNKDTFW--PIVNAAGDKT-VVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKL 135
           GQV   +    W   +  A   KT VV+D    WCGPC+ +AP F DL++K  +V+FLK+
Sbjct: 6   GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKV 65

Query: 136 DCNLDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAI 178
           D + + K +A +  I+ +PTF  LK+ K++ +V GAK DEL   I
Sbjct: 66  DTD-ELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

BLAST of Chy2G039000 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 70.1 bits (170), Expect = 2.1e-12
Identity = 33/89 (37.08%), Postives = 56/89 (62.92%), Query Frame = 0

Query: 95  DKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNLDNKP-LAKELGIKVVPTF 154
           +K +V+D    WCGPC+++ P    +++K+ DV F+KLD  +D  P +AKE  +  +PTF
Sbjct: 47  NKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLD--VDELPDVAKEFNVTAMPTF 106

Query: 155 KILKDKKVVKEVTGAKFDELVHAIDAVRS 183
            ++K  K ++ + GAK DEL   +  +R+
Sbjct: 107 VLVKRGKEIERIIGAKKDELEKKVSKLRA 133

BLAST of Chy2G039000 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 68.9 bits (167), Expect = 4.7e-12
Identity = 30/79 (37.97%), Postives = 53/79 (67.09%), Query Frame = 0

Query: 96  KTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNLDNKPLAKELGIKVVPTFKI 155
           K +V+D    WC PC+ +AP F DL++K+LDVVF K+D + +   +A+E  ++ +PTF  
Sbjct: 28  KLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVD-ELNTVAEEFKVQAMPTFIF 87

Query: 156 LKDKKVVKEVTGAKFDELV 175
           +K+ ++ + V GA  +E++
Sbjct: 88  MKEGEIKETVVGAAKEEII 105

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P294501.7e-5165.19Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1[more]
Q9XFH99.5e-5070.27Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 ... [more]
Q9XFH86.1e-4978.33Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 ... [more]
O813326.8e-4876.74Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 ... [more]
Q8S0912.0e-4775.78Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09... [more]
Match NameE-valueIdentityDescription
A0A0A0M3401.5e-8593.26Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G651650... [more]
A0A1S3B9B31.6e-8491.57thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 P... [more]
A0A6J1DTK22.4e-8086.52thioredoxin F-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1JM963.5e-7986.52thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114856... [more]
A0A6J1HAM53.8e-7885.39thioredoxin F-type, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11146... [more]
Match NameE-valueIdentityDescription
XP_004139092.12.97e-11093.26thioredoxin F-type, chloroplastic [Cucumis sativus] >KGN66631.1 hypothetical pro... [more]
XP_008443649.16.99e-10991.57PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo][more]
XP_022157062.12.14e-10386.52thioredoxin F-type, chloroplastic-like [Momordica charantia][more]
XP_038878300.11.08e-10287.64thioredoxin F-type, chloroplastic-like [Benincasa hispida][more]
XP_022988428.17.16e-10286.52thioredoxin F-type, chloroplastic-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G16400.16.7e-5170.27thioredoxin F2 [more]
AT3G02730.14.4e-5078.33thioredoxin F-type 1 [more]
AT3G51030.16.6e-1440.95thioredoxin H-type 1 [more]
AT5G39950.12.1e-1237.08thioredoxin 2 [more]
AT5G42980.14.7e-1237.97thioredoxin 3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 98..106
score: 31.23
coord: 106..115
score: 65.5
coord: 146..157
score: 33.89
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 62..182
e-value: 1.3E-34
score: 120.4
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 45..183
NoneNo IPR availablePANTHERPTHR10438:SF382THIOREDOXIN F2, CHLOROPLASTICcoord: 45..183
NoneNo IPR availableCDDcd02947TRX_familycoord: 84..178
e-value: 3.29485E-27
score: 96.4732
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 78..178
e-value: 1.4E-22
score: 79.6
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 69..182
score: 12.859224
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 99..117
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 71..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G039000.1Chy2G039000.1mRNA