Chy2G038330 (gene) Cucumber (hystrix) v1

Overview
NameChy2G038330
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionAmino acid/polyamine transporter
LocationchrH02: 13816340 .. 13822038 (+)
RNA-Seq ExpressionChy2G038330
SyntenyChy2G038330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCTCAAACTTGTGTTGAAAATCCTAAACCCCATAAAAACCCCACCTCCAATTCCATCTCAAATCCCCCAATCCTCCAAATAATAACCTCGAATTACCCCATTCCCATCCCCAAAAACTTAACTCTAATCCCCTTCATCTTCTTTATCTACTTCGAGGTTGTTGGTGGCCCTTACGGTGAGGAGCCCATCGTCGTCCAAGCTACTGGACCCCTCCTTGTCATCAGTGGCGGATCTAAAAAATTTATTGATAGAGGACTTCGAGTTGTAACTTAGAGAAAAAAACTACACAAGTAAGATTTAAACTGTGGATGGAAGGGGATGATAAACATAATTACCACTAAACTACCTACAAATATTAAACATCAATTGGTTTTGTTTATACATATTATATAAAGAAAATAAAGTTGAGGGGGGCTAGCCCACCTGGACCTATACTAAATTCGTCGCTGCTTGTCATCCTCGGTTTCATCATCTTCCCCTTCATATGAAGCATCCCTGAGGCCCTTATTACCGTCGAGCTCTCCATTGCCTTTCCCAGCAACGGTGGCTTCGTCATTTGGGCTGAGCGAGCCTTCAGACCCTTCTGGGGTTCTCTCATGGGGACTTGAAAAATCCTTAGCGGCATCATCAACATTGCTTAAAACAGCTCCCGCCCTTCAATCCGGTAGTCCTCATTGCGGCGCCCTCTTGGCCTCCTCTGCCGTACTCGCCATCCTCAACTACATTGGCCTTAGCATCGTCGGATATGTCACCGTCGCTTTGGCTTTCTTGTCAATCCTACCCTTTATTTTAATGACGCTTATCACAATCCCTAAATTCAAACCACATCGATGGGGGAGTTTAGGTGATAAAGGAATGGAAAAGGATTGGAATCTATATCTCAATACTCTATTTTGGAATCTTAATTTTTGGGATAATGTGAGTGTAGGAAAAAACAAATGTTGATCATAGTTGTGCGGTGTCGAAACGTGCCCTTAATGCAAAATTCGGCGCGACCTAGGTGCTAAATCACTTATGTCGATTGCTCCCCAAGGTTAACATCACTTTTCCTACTCATGCGTGCACTCGCTTAAGTTAAGAATGGAATAAAAAGGACAAGGATTGCTTAGAGAATCAGAGGAAAAAACTAGGGTTTTGCAAGAAAAATAACTGAACTCCCAAAATTTTTCTTTATGAAATATATATATATATATATATAAAGAATAATAATTAGAATTATAAAATAAATTAAATGATAATAATTATTAATTTCCAATTGAAATATCAATTAGAAAACAGTACAATGATAGTTAATCCCAACAATCCCCCACAAATGATTATCATTGCATTATAGTTAAAATAGCAAGAAAGGATTTTCTCTGAGCAAAGAAAGAAGTAGTATAAACTTAAACATCAATATCTTTCGATTTAAATTGATGCGTAGTGAGGTGGGACAACAATCCAAATTATTGAAAGTAACTTACCTTTTGAACTTTCGATAACAACGGTTGAGACCCCCACAACACGTTTTACTTCTTAAATTTTCATTGATTTTGCAATAAAGTCTATCACAATATACCACTAAAAATTGTGCTATTTAAGGCCATGCACATAGAACCTCGAGTCAACATGAAAGCTGTAGAAAAAGATCCTTAAACTATTTCATAGAAGGCGGCCACACCTTCACAATCACGTTTATTGTTTCATCAAGTCTATCACAATAGACCAGTCAAAACTGAGCGATGAAGGCTTCAGATCTAGTTCATATCAAAACCAACTTCATCATGTCTATCAAAGACAAACCACTCAAAACTGATCTATGAAGATTTTACAGTTATCCATCAAGTTCATACCAAGAGCACCCAAAGAAGGGCTATGGAATTTTCAAAGGTTTTAATTTCATCCATCAAATCCATTTAAGGATTACCCACACATGGCTATGGACCACCAAACCTATCACAGTAGACCACCCAGAAAAGGGCTATGAACCATCAAGTCTATCGCAATAGACCACTCAATTAAAGAGCTATGGACCATCAAGTCTATCGCAATAGACCACCCAAATAAAGGGCTATGGATTTACAAAGTCCCTTAGACCCCACATACTTCAAGAAGATAATTCTTTCATTCAACTATCATTTCACAACTCCATGTTTCAGACGAATATGCCTTCTACTGCCATACCATACTATTCTTGACAATCTCTATAACAGGGTATGAATCTCAATAAAATTATAATGGTATAGAGCCCACCACAATGGTATATTTTTCATTAAGAACACATATCCACTAGTAAGGCTTACTTCGTCATTCTTAGTTACTTGGTTTGCATATATTACCTCTCTAGGTATGATATACAATAATTAAAATGCAAACCAAAATCTATTGTAACCTTAAGATATCTCAATAAATGACGAAGAACAATAAAATAATCTTAATCAGAATTATGTGTATATATGTACTCAATCTTCTCACAACATATGCAATAACACATCTATACAGTTTATCAAAACATAGTACTTTCTATAATCTTTGCATATTCGGATTGAGAAACGTTATCTCATTTATTTTCCTTAAGGATCATACTAGCATCATAAAGTGTTCTTACAATTGTCAAGTCTCTTTAATAGTATTCAATGTGTGATTGACATCAATCAAAACATTTTTAATAATACTTCAACACATCACATTAGTCTCATATAAATCTTTCACTTTAAAATGTGATAACTTTATAGCATTACTAACAATTATGTTTGTATCACATAAATTACACCAACATACAAATATATAGTCACACATTAAATTTTAAACAACTTTTAGTAAACACATATATCAACAATCACTACTCAAGACATTGTTTACTAAAGTGTTGTTAAAAAAATTTCCATTAAACTTTCAGAAACTAGTTAAAGACCATAAAGAAATTTGACTCTTTCAGAAACTAAAGTTACCATTGAGAAATATCGTCTTTACATACACTTCGATGTATTAGAAGATCACATACAGCTACAAAAGCTTTTAAAGCTCTATAGTGGTTGATTAGTCATACGAGAACAAGAATTAAAACATTATAAATTTCATGTTTGATTCAAAATATCTTTCATAAGTCTAAAGTTACACCTGTGCACTTATGATTAGTTTTCTTATTTATTGTGGAACTTTGGTCGCATTCCCAAAGATCCTCCTCTCGAACAAAGTTCCAAATGAACCTCCCTTAAAATAGACACTCATCCATTTAACTCTTATCTAGCTAGGCTAACTCCTCCTCTCTAGAACATATTGATTATTCGATACAACTCAACCATGGATAACAACATTACTACTTGTAAGGTTCCACTACACCTTTGTTCGACCTAAGGATTATATTAACAAGGCTAAACCAAGGACGATGTGACTATGATACCACTTTTAGGGATAACTTAGGGTATAAGTCCTCGTGCCTTATAAGATATCACATATTTGATAGCTTAGACAATATCTTAAACTTCCATAAAATCTTATGAGCTTCATAAACAATGAATTTACATATTTTCATACTACTAGCCAACTTTAATAATATGCAAATGATGTTGTACTACCAAACTTAACAATTCATGATGCAAGTCATACATAAACTTTGTCAAATATGACATACATGATAAATATTTCTACTCATACTAACATGCTAATAGAATTGTTCAAGTAGATCACAATAGTGTCTCAATATTCACAAATTGATTTATCATTTAAACTTATAAATCTATATGTGATACTACTGTGAGCATAATCAATAAACATAGTCAAAGGTTTTTAATCATACTATAAATTTCTTGAACACAAGATATGATACCTTAGTTTGACACCCCACATTTTCAAATATTTAGGTGCATAACATATCCAAAGTTTCATGGTACCATTTTGTTGATTAACTCAAATTCATCATAATAGCATTTCAATTATGGTATTAATAGCATTATAATAACTATGAACCATTATGCTTGCCAATGAAATATTCAATATATATATACTTATCAAACGTGTATTGTATACCATGCTCAAATATAGACATGAAATAAAAATTTCAAATTATCATGTCATATATAAAAACAAGAAACATTGTTGAGCCTTAAACCATAGGAAAACCAAACCCATAATAAAAATCAACCAAAGAAAGCTCAACAAGTTTTAAAAAAATACAAAGTTATCAACCGAAATATTTTCACTACATATGAAGAGAAAAAAAAAATGGATTGAGATTTCAAACTAATCAAGAACATCATTATCCAAATTTACAATAACTAACTCTCTCTATCACATGTACATTTGAAAATCAAAGTATAGAATTTCAAATCAAGGTTCTATCTCAATATGTTGAGTTATACCAAATGGTTGAAGGAAGATTTATGTTAAAAAAAATCTTATTTTTCTCTCATATTCAATTCCAGTATCTCCATATACCACAAGAAGATACCAAAACATTTAGAAACAAATCGATTGAATTTTCACTCACAATGAACTCTTTCAACCAATGATAATTTATTGACCGGAGCAAAGCAGGCTAATAACCCAACCATAATTATAATTCCTAGGAAGAAGTTACATACCTTTCCTTTTAGTTCCATCAACATCTCAAATAAAAATACTCCCAAGTCCACAAATCTCAAACAAGAAGTTGTTAAAAACCACGTTAAAGGTGGTTAAAAACTAAATGAATAACACTAATATGGAAAAAGGTTGAAGTTATTATCCATCAATGGTGGCCTTTTATGGCAGTTTCACAACTCAACCCTACTTGTGAGAATATCCTGGTTTTTCTTCTGAATGTAAAACCATGTAGCACAGGACTGAATCCTACTTGTGGCTGGTTTTCCAGGAATCTCATAAAATAAAGGTCTCCACATCTGAAAAATTATCCTTCAAAACTTCCTCTTTTACACTATGCCAAAATCAATACTACTTATATACATACTATAAATTATTCAATCACAAATAAAAAAAAATTAATTGAAGAATAGTTTAGTGCATTCAAGTCAAACAATTTCTCCCAATTTCATGAAGAATTCATCAACCTAGAGATTTCTAATTCATAATATTTTTCAATTATGTAATATTTGGTCATTTGTACCTTTTAATTTACTATCCAATGCAAATTTATTCATTAAATTTATTTCTAAAACTAGAAAATAGTAATGAATAAAACTTGAAAATAAATAAAAATAAAATAAGAGAAAAATTCTCCTAAAATTTTGTCCAGTATTAGTTACTTACCAAAATATTAGGATACATCACTCACGTGGATCCAAATTTTTCTGCTGAGAAGATCGTAAACGTGAATTCCTATTGAACTCTTCTGAGATCCTGCCATGAGATGGACGTGGAGCGGCGACAATGAGGTATCGAGTTGAAGTGGCACCATTTTCATTGATCGTCTAGCAAACACATAGATGGCCTAAGAGATTTATACCAACTGGTACACGACCTCCTCTGAATTTCAAATTAGAATCCATCGTTGCCTCGATGTCACTGATTGTCGTCTCCTCTTCCTCATCCTAACTTCTCTTTTTCTCATCCTCTTTTTCTCTGCTTCCACTCTCTTTGACATTCCGTTTTCCACTCTCGCACCGCTCCAATTCTTCATCATCGACACTGCCTTTCAACAGCATCTCGATTTGAATTCTCTTCCGAGTATTCATGATTCTTCCCTTTCATCCGATGGAGGAAGGGATTTCGTCTGA

mRNA sequence

ATGGATCCTCAAACTTGTGTTGAAAATCCTAAACCCCATAAAAACCCCACCTCCAATTCCATCTCAAATCCCCCAATCCTCCAAATAATAACCTCGAATTACCCCATTCCCATCCCCAAAAACTTAACTCTAATCCCCTTCATCTTCTTTATCTACTTCGAGGTTGTTGGTGGCCCTTACGCATCCCTGAGGCCCTTATTACCGTCGAGCTCTCCATTGCCTTTCCCAGCAACGGTGGCTTCGTCATTTGGGCTGAGCGAGCCTTCAGACCCTTCTGGGGTTCTCTCATGGGGACTTGAAAAATCCTTAGCGGCATCATCAACATTGCTTAAAACAGCTCCCGCCCTTCAATCCGGTAGTCCTCATTGCGGCGCCCTCTTGGCCTCCTCTGCCGTACTCGCCATCCTCAACTACATTGGCCTTAGCATCGTCGGATATGTCACCGTCGCTTTGGCTTTCTTAATCCATCGTTGCCTCGATGTCACTGATTGTCGTCTCCTCTTCCTCATCCTAACTTCTCTTTTTCTCATCCTCTTTTTCTCTGCTTCCACTCTCTTTGACATTCCGTTTTCCACTCTCGCACCGCTCCAATTCTTCATCATCGACACTGCCTTTCAACAGCATCTCGATTTGAATTCTCTTCCGAGTATTCATGATTCTTCCCTTTCATCCGATGGAGGAAGGGATTTCGTCTGA

Coding sequence (CDS)

ATGGATCCTCAAACTTGTGTTGAAAATCCTAAACCCCATAAAAACCCCACCTCCAATTCCATCTCAAATCCCCCAATCCTCCAAATAATAACCTCGAATTACCCCATTCCCATCCCCAAAAACTTAACTCTAATCCCCTTCATCTTCTTTATCTACTTCGAGGTTGTTGGTGGCCCTTACGCATCCCTGAGGCCCTTATTACCGTCGAGCTCTCCATTGCCTTTCCCAGCAACGGTGGCTTCGTCATTTGGGCTGAGCGAGCCTTCAGACCCTTCTGGGGTTCTCTCATGGGGACTTGAAAAATCCTTAGCGGCATCATCAACATTGCTTAAAACAGCTCCCGCCCTTCAATCCGGTAGTCCTCATTGCGGCGCCCTCTTGGCCTCCTCTGCCGTACTCGCCATCCTCAACTACATTGGCCTTAGCATCGTCGGATATGTCACCGTCGCTTTGGCTTTCTTAATCCATCGTTGCCTCGATGTCACTGATTGTCGTCTCCTCTTCCTCATCCTAACTTCTCTTTTTCTCATCCTCTTTTTCTCTGCTTCCACTCTCTTTGACATTCCGTTTTCCACTCTCGCACCGCTCCAATTCTTCATCATCGACACTGCCTTTCAACAGCATCTCGATTTGAATTCTCTTCCGAGTATTCATGATTCTTCCCTTTCATCCGATGGAGGAAGGGATTTCGTCTGA

Protein sequence

MDPQTCVENPKPHKNPTSNSISNPPILQIITSNYPIPIPKNLTLIPFIFFIYFEVVGGPYASLRPLLPSSSPLPFPATVASSFGLSEPSDPSGVLSWGLEKSLAASSTLLKTAPALQSGSPHCGALLASSAVLAILNYIGLSIVGYVTVALAFLIHRCLDVTDCRLLFLILTSLFLILFFSASTLFDIPFSTLAPLQFFIIDTAFQQHLDLNSLPSIHDSSLSSDGGRDFV*
Homology
BLAST of Chy2G038330 vs. ExPASy Swiss-Prot
Match: Q9LHN7 (Probable polyamine transporter At3g13620 OS=Arabidopsis thaliana OX=3702 GN=At3g13620 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.4e-05
Identity = 51/153 (33.33%), Postives = 69/153 (45.10%), Query Frame = 0

Query: 40  KNLTLIPFIFFIYFEVVGGPYASLRPLLPSSSPL---------PF-----PATVASSFGL 99
           K LTLIP +F IYFEV GGP+    P + ++ PL         PF      A + +    
Sbjct: 28  KKLTLIPLVFLIYFEVAGGPFGE-EPAVQAAGPLLAILGFLIFPFIWSIPEALITAELST 87

Query: 100 SEPSDPSGVLSW-------------GLEKSLA-----ASSTLL------KTAPALQSGSP 155
           + P +  G + W             G  K L+     AS  +L      K  P L+SG P
Sbjct: 88  AFPGN-GGFVIWAHRAFGSFVGSMMGSLKFLSGVINVASFPVLCVTYLDKLFPVLESGWP 147

BLAST of Chy2G038330 vs. ExPASy TrEMBL
Match: A0A6J1JAG3 (probable polyamine transporter At3g13620 OS=Cucurbita maxima OX=3661 GN=LOC111485011 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.8e-17
Identity = 82/191 (42.93%), Postives = 95/191 (49.74%), Query Frame = 0

Query: 1   MDPQTCVENPKPHKNPTSNSISNPPILQIITSNYPIPIPKNLTLIPFIFFIYFEVVGGPY 60
           MD +  V NP PH+ PTSNS   PPIL   T N PI   K LTLIP IF IYFEV GGPY
Sbjct: 1   MDHRIRVPNPHPHQKPTSNSDLPPPILPRHTPNSPIAAAKKLTLIPLIFLIYFEVAGGPY 60

Query: 61  ASLRPLLPSSSPL---------PFPATVASSFGLSEPSDP----SGVLSW---------- 120
               P + ++ PL         PF  +V  +   +E S       G + W          
Sbjct: 61  GE-EPAVQAAGPLLAIIGFIVFPFIWSVPEALITAELSTAFPGNGGFVIWAQTAFGSFWG 120

Query: 121 ---GLEKSLA-----------ASSTLLKTAPALQSGSPHCGALLASSAVLAILNYIGLSI 155
              G  K L+             + + K AP LQSG P   ALLASS VLA LNYIGL+I
Sbjct: 121 SLMGTWKILSGVINIAAYPVLCINYIQKIAPQLQSGWPRRSALLASSVVLAALNYIGLTI 180

BLAST of Chy2G038330 vs. ExPASy TrEMBL
Match: A0A6J1H830 (probable polyamine transporter At3g13620 OS=Cucurbita moschata OX=3662 GN=LOC111461340 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.2e-17
Identity = 82/191 (42.93%), Postives = 95/191 (49.74%), Query Frame = 0

Query: 1   MDPQTCVENPKPHKNPTSNSISNPPILQIITSNYPIPIPKNLTLIPFIFFIYFEVVGGPY 60
           MD Q  V N  PH+ PTSNS S PPIL   T N PI   + LTLIP IF IYFEV GGPY
Sbjct: 1   MDHQIRVTNTGPHQKPTSNSDSPPPILPTTTPNSPIAAAEKLTLIPLIFLIYFEVAGGPY 60

Query: 61  ASLRPLLPSSSPL---------PFPATVASSFGLSEPSDP----SGVLSW---------- 120
               P + ++ PL         PF  +V  +   +E S       G + W          
Sbjct: 61  GE-EPAVQAAGPLLAIIGFIVFPFIWSVPEALITAELSTAFPGNGGFVIWAQTAFGPFWG 120

Query: 121 ---GLEKSLA-----------ASSTLLKTAPALQSGSPHCGALLASSAVLAILNYIGLSI 155
              G  K L+             + + K AP LQSG P   ALLASS VLA LNYIGL+I
Sbjct: 121 SLMGTWKILSGVINIAAYPVLCINYIQKIAPQLQSGWPRRTALLASSVVLAALNYIGLTI 180

BLAST of Chy2G038330 vs. ExPASy TrEMBL
Match: A0A0A0L0L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G658500 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.6e-15
Identity = 55/70 (78.57%), Postives = 55/70 (78.57%), Query Frame = 0

Query: 152 AFLIHRCLDVTDCRLLFLILTSLFLILFFSASTLFDIPFSTLAPLQFFIIDTAFQQHLDL 211
           AF      DVTDCRLLFLILTSL LILFFSASTL DIPFSTLAPLQ FII TAFQ  LD 
Sbjct: 3   AFRRSSLTDVTDCRLLFLILTSLSLILFFSASTLSDIPFSTLAPLQSFIIGTAFQHPLDS 62

Query: 212 NSLPSIHDSS 222
           N LPSI DSS
Sbjct: 63  NYLPSIRDSS 72

BLAST of Chy2G038330 vs. ExPASy TrEMBL
Match: A0A5A7UQT6 (Putative polyamine transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00460 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09
Identity = 67/176 (38.07%), Postives = 88/176 (50.00%), Query Frame = 0

Query: 16  PTSNSISNPPILQIITSNYPIPIPKNLTLIPFIFFIYFEVVGGPYASLRPLLPSSSPL-- 75
           PT++S S   IL   T + P  + K LTLIP IF IYFEV GGPY    P + ++ PL  
Sbjct: 13  PTTDSSSQ--ILPTTTPSTPAAVRKKLTLIPLIFLIYFEVAGGPYGE-EPTVQAAGPLLA 72

Query: 76  -------PF-----PATVASSFGLSEPSDPSGVL---------------SWGLEK---SL 135
                  PF      A + +    + P +   V+               +W L     ++
Sbjct: 73  IVGFILFPFIWSVPEALITAELSTAFPGNGGFVIWAERAFGPFWGSLMGTWKLLSGVINI 132

Query: 136 AASSTLL-----KTAPALQSGSPHCGALLASSAVLAILNYIGLSIVGYVTVALAFL 155
           AA   L      K AP L+SG P   A+LAS+ +LA+LNYIGL+IVGYV V LAFL
Sbjct: 133 AAFPVLCIDYIKKIAPPLESGWPRRIAVLASTLILALLNYIGLTIVGYVAVVLAFL 185

BLAST of Chy2G038330 vs. ExPASy TrEMBL
Match: A0A1S3BNB6 (probable polyamine transporter At3g13620 OS=Cucumis melo OX=3656 GN=LOC103491953 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09
Identity = 67/176 (38.07%), Postives = 88/176 (50.00%), Query Frame = 0

Query: 16  PTSNSISNPPILQIITSNYPIPIPKNLTLIPFIFFIYFEVVGGPYASLRPLLPSSSPL-- 75
           PT++S S   IL   T + P  + K LTLIP IF IYFEV GGPY    P + ++ PL  
Sbjct: 13  PTTDSSSQ--ILPTTTPSTPAAVRKKLTLIPLIFLIYFEVAGGPYGE-EPTVQAAGPLLA 72

Query: 76  -------PF-----PATVASSFGLSEPSDPSGVL---------------SWGLEK---SL 135
                  PF      A + +    + P +   V+               +W L     ++
Sbjct: 73  IVGFILFPFIWSVPEALITAELSTAFPGNGGFVIWAERAFGPFWGSLMGTWKLLSGVINI 132

Query: 136 AASSTLL-----KTAPALQSGSPHCGALLASSAVLAILNYIGLSIVGYVTVALAFL 155
           AA   L      K AP L+SG P   A+LAS+ +LA+LNYIGL+IVGYV V LAFL
Sbjct: 133 AAFPVLCIDYIKKIAPPLESGWPRRIAVLASTLILALLNYIGLTIVGYVAVVLAFL 185

BLAST of Chy2G038330 vs. NCBI nr
Match: XP_023516717.1 (probable polyamine transporter At3g13620 [Cucurbita pepo subsp. pepo] >XP_023516718.1 probable polyamine transporter At3g13620 [Cucurbita pepo subsp. pepo] >XP_023516719.1 probable polyamine transporter At3g13620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103 bits (256), Expect = 2.33e-21
Identity = 83/192 (43.23%), Postives = 95/192 (49.48%), Query Frame = 0

Query: 1   MDPQTCVENPKPHKNPTSNSISNPPILQIITSNYPIPIPKNLTLIPFIFFIYFEVVGGPY 60
           MD Q  V NP PH+ PTSNS   PPIL   T N PIP  K LTLIP IF IYFEV GGPY
Sbjct: 1   MDHQIGVPNPHPHQKPTSNSDLPPPILPTTTPNSPIPAAKKLTLIPLIFLIYFEVAGGPY 60

Query: 61  ASLRPLLPSSSPL---------PF-----PATVASSFGLSEPSDPSGVLSWGLEK----- 120
               P + ++ PL         PF      A + +    + P +  G + W         
Sbjct: 61  GE-EPAVQAAGPLLAIIGFIVFPFIWSVPEALITAELSTAFPGN-GGFVIWAQRAFGPFW 120

Query: 121 --------------SLAASSTLL-----KTAPALQSGSPHCGALLASSAVLAILNYIGLS 154
                         ++AA   L      K AP LQSG P   ALLASS VLA LNYIGL+
Sbjct: 121 GSLMGTWKILSGVINIAAYPVLCINYIQKIAPQLQSGWPRRTALLASSVVLAALNYIGLT 180

BLAST of Chy2G038330 vs. NCBI nr
Match: XP_022987472.1 (probable polyamine transporter At3g13620 [Cucurbita maxima])

HSP 1 Score: 97.4 bits (241), Expect = 2.62e-19
Identity = 81/191 (42.41%), Postives = 96/191 (50.26%), Query Frame = 0

Query: 1   MDPQTCVENPKPHKNPTSNSISNPPILQIITSNYPIPIPKNLTLIPFIFFIYFEVVGGPY 60
           MD +  V NP PH+ PTSNS   PPIL   T N PI   K LTLIP IF IYFEV GGPY
Sbjct: 1   MDHRIRVPNPHPHQKPTSNSDLPPPILPRHTPNSPIAAAKKLTLIPLIFLIYFEVAGGPY 60

Query: 61  ASLRPLLPSSSPL---------PF-----PATVASSFGLSEPSDPSGVL----------- 120
               P + ++ PL         PF      A + +    + P +   V+           
Sbjct: 61  GE-EPAVQAAGPLLAIIGFIVFPFIWSVPEALITAELSTAFPGNGGFVIWAQTAFGSFWG 120

Query: 121 ----SWGLEK---SLAASSTLL-----KTAPALQSGSPHCGALLASSAVLAILNYIGLSI 154
               +W +     ++AA   L      K AP LQSG P   ALLASS VLA LNYIGL+I
Sbjct: 121 SLMGTWKILSGVINIAAYPVLCINYIQKIAPQLQSGWPRRSALLASSVVLAALNYIGLTI 180

BLAST of Chy2G038330 vs. NCBI nr
Match: XP_022960606.1 (probable polyamine transporter At3g13620 [Cucurbita moschata])

HSP 1 Score: 97.1 bits (240), Expect = 3.59e-19
Identity = 81/191 (42.41%), Postives = 96/191 (50.26%), Query Frame = 0

Query: 1   MDPQTCVENPKPHKNPTSNSISNPPILQIITSNYPIPIPKNLTLIPFIFFIYFEVVGGPY 60
           MD Q  V N  PH+ PTSNS S PPIL   T N PI   + LTLIP IF IYFEV GGPY
Sbjct: 1   MDHQIRVTNTGPHQKPTSNSDSPPPILPTTTPNSPIAAAEKLTLIPLIFLIYFEVAGGPY 60

Query: 61  ASLRPLLPSSSPL---------PF-----PATVASSFGLSEPSDPSGVL----------- 120
               P + ++ PL         PF      A + +    + P +   V+           
Sbjct: 61  GE-EPAVQAAGPLLAIIGFIVFPFIWSVPEALITAELSTAFPGNGGFVIWAQTAFGPFWG 120

Query: 121 ----SWGLEK---SLAASSTLL-----KTAPALQSGSPHCGALLASSAVLAILNYIGLSI 154
               +W +     ++AA   L      K AP LQSG P   ALLASS VLA LNYIGL+I
Sbjct: 121 SLMGTWKILSGVINIAAYPVLCINYIQKIAPQLQSGWPRRTALLASSVVLAALNYIGLTI 180

BLAST of Chy2G038330 vs. NCBI nr
Match: KAG7023808.1 (putative polyamine transporter, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 96.7 bits (239), Expect = 4.91e-19
Identity = 81/191 (42.41%), Postives = 95/191 (49.74%), Query Frame = 0

Query: 1   MDPQTCVENPKPHKNPTSNSISNPPILQIITSNYPIPIPKNLTLIPFIFFIYFEVVGGPY 60
           MD Q  V N  PH+ PTSNS   PPIL   T N PI   K LTLIP IF IYFEV GGPY
Sbjct: 1   MDHQIRVTNTGPHQKPTSNSDPPPPILPTTTPNSPIAAAKKLTLIPLIFLIYFEVAGGPY 60

Query: 61  ASLRPLLPSSSPL---------PF-----PATVASSFGLSEPSDPSGVL----------- 120
               P + ++ PL         PF      A + +    + P +   V+           
Sbjct: 61  GE-EPAVQAAGPLLAIIGFIVFPFIWSVPEALITAELSTAFPGNGGFVIWAQTAFGPFWG 120

Query: 121 ----SWGLEK---SLAASSTLL-----KTAPALQSGSPHCGALLASSAVLAILNYIGLSI 154
               +W +     ++AA   L      K AP LQSG P   ALLASS VLA LNYIGL+I
Sbjct: 121 SLMGTWKILSGVINIAAYPVLCINYIQKIAPQLQSGWPRRTALLASSVVLAALNYIGLTI 180

BLAST of Chy2G038330 vs. NCBI nr
Match: XP_004145597.1 (uncharacterized protein LOC101216898 [Cucumis sativus] >KGN55490.1 hypothetical protein Csa_012803 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 1.23e-17
Identity = 53/62 (85.48%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 160 DVTDCRLLFLILTSLFLILFFSASTLFDIPFSTLAPLQFFIIDTAFQQHLDLNSLPSIHD 219
           DVTDCRLLFLILTSL LILFFSASTL DIPFSTLAPLQ FII TAFQ  LD N LPSI D
Sbjct: 11  DVTDCRLLFLILTSLSLILFFSASTLSDIPFSTLAPLQSFIIGTAFQHPLDSNYLPSIRD 70

Query: 220 SS 221
           SS
Sbjct: 71  SS 72

BLAST of Chy2G038330 vs. TAIR 10
Match: AT3G13620.1 (Amino acid permease family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06
Identity = 51/153 (33.33%), Postives = 69/153 (45.10%), Query Frame = 0

Query: 40  KNLTLIPFIFFIYFEVVGGPYASLRPLLPSSSPL---------PF-----PATVASSFGL 99
           K LTLIP +F IYFEV GGP+    P + ++ PL         PF      A + +    
Sbjct: 28  KKLTLIPLVFLIYFEVAGGPFGE-EPAVQAAGPLLAILGFLIFPFIWSIPEALITAELST 87

Query: 100 SEPSDPSGVLSW-------------GLEKSLA-----ASSTLL------KTAPALQSGSP 155
           + P +  G + W             G  K L+     AS  +L      K  P L+SG P
Sbjct: 88  AFPGN-GGFVIWAHRAFGSFVGSMMGSLKFLSGVINVASFPVLCVTYLDKLFPVLESGWP 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LHN72.4e-0533.33Probable polyamine transporter At3g13620 OS=Arabidopsis thaliana OX=3702 GN=At3g... [more]
Match NameE-valueIdentityDescription
A0A6J1JAG34.8e-1742.93probable polyamine transporter At3g13620 OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1H8306.2e-1742.93probable polyamine transporter At3g13620 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A0A0L0L97.6e-1578.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G658500 PE=4 SV=1[more]
A0A5A7UQT61.3e-0938.07Putative polyamine transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3BNB61.3e-0938.07probable polyamine transporter At3g13620 OS=Cucumis melo OX=3656 GN=LOC103491953... [more]
Match NameE-valueIdentityDescription
XP_023516717.12.33e-2143.23probable polyamine transporter At3g13620 [Cucurbita pepo subsp. pepo] >XP_023516... [more]
XP_022987472.12.62e-1942.41probable polyamine transporter At3g13620 [Cucurbita maxima][more]
XP_022960606.13.59e-1942.41probable polyamine transporter At3g13620 [Cucurbita moschata][more]
KAG7023808.14.91e-1942.41putative polyamine transporter, partial [Cucurbita argyrosperma subsp. argyrospe... [more]
XP_004145597.11.23e-1785.48uncharacterized protein LOC101216898 [Cucumis sativus] >KGN55490.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
AT3G13620.11.7e-0633.33Amino acid permease family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G038330.1Chy2G038330.1mRNA