Chy2G037970 (gene) Cucumber (hystrix) v1

Overview
NameChy2G037970
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
LocationchrH02: 13249542 .. 13258286 (+)
RNA-Seq ExpressionChy2G037970
SyntenyChy2G037970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATATGGGCTAGAACTAGTTCAGGCGAGGAAAGAAAGTATCAAGTTAATTAGAGAATATTTAAAGATTACCCACGATAAACAAAAGAGTTATGCATACCATCATCGCAAGACATTGGAATTTGAAGTTAAAGATAAAGTTTTTTTGAATTTGTCACCTTGGAAAGGTGTGATTAGATTTGGAAGGAAAGGAAAACTAAGTCCAAGATACATAGGACCTTATAAAATTCTTGCACACGTAGGACCAGTAGCTTATAAATTGAGATTGCCTGCAAAGTTGTTTAGAATTCATAATGTTTTCAATGTCTCCATGTTGGGAAAGTATGTTCTAGATTCCTTGCATATACTTCATGAATAGCCCATAGAAATAGAAGAAGACTTGACTTACGAAGAAAAGTGTTTGCTTGTGTTAGATAAAAAGGAACAAGTGTTAAGAACAACGATTATTTCCATGGTCAAAGTGTTATGAAATAATCATTGTGTTGAGGAAGCCACCTGGAAAAATCAAGAGAAAATGAAAACTAAGTATCCTCAACTCATTGCATGACTTATTGAATTTTAAGGACGAAATTACAATAAGGAGGTAGTAGTTGTGAGACTCTGATCACATTCTTAGACTACACGTTAAAACCTCACACGAGAGAAATTGTATGCATTGTGATTGTTCGGAATGGAAGCTGACAACTGGAAGTGTTGCAAAGCAACTTGTAAAGTGTTTTCAGTTATGTGGTAGGAAAGAGTTATGCGATGAGATGAGAGGTGATGTGAGTTTCCTTCACTGTGAAGTAGCTGATGTCATCCTTATTTAAGAAGTTCGATGAGTTGATTTAACCTTGCAGCCCAACTGAGTTTTGGAGAAGAGGTCGCAGAAACACATGATGTTTTGACAATGGTTGAGTCTCACGGTCAAGAAGAAATAATCATTCTGGTATAGAAAACTTCACCAGAGAAGGATTATAAATAGGAGAAGTCCGACAAACCGTGAGAACTTCTTGCACCTTGTGTTTTCTTAAGAAAAAGTTGGAAAGAATTGCAAAGGTTTCTGGTAAGCTACCACAAGCTCAATTTCGGCGAGAATCTACAAAGAAGTTCAAGGGAACTTTTGGTTGAGGAGCTTAGGCGAGAAGTTGCTTGATTATGAGTGATTTCTTTAAAATGTTTCAAACTAAAAGAATTTCCACTTTAATTGAATTCTTATACATAAATTTCTCTAGTGAATTCTTGAGTCAACAATTTCAGTTATGTTTCTCAAATTCTTAAAATGGACTTGGTTTACAAACGAATTGAATTTGAAAATGAACTGGAATGATTATGATGAAATGATCTTTGGTACCCTACGCAATGAGATTCTTCATACTTGCTATGTGTTCTGGTGTGGGATGCCCTATAATTATTGTGTAATCTGGAATGAAATGCCTCAAACTTGTTGTATGATCTAGTATGCTGTCTTATACTTGCTGTATGATCTGGTATAAGATGCCTTTTGCTTTTGGTATAGTATGGCATTGGAAGATTCATTATGCGTAACGAAATTGATGGAGAATTTGTTAATTACGAGAGATTCTCCACATAGATGGAACTCAACAAAAGAGTGTTGTAAACGCTTGAGTTAAGGAGGGTCCAAAGACATAATCAGACAAGCATAATGATTTTGCGTTATGAACTATGAAACGTGTTACGTGAAATATTTTTGTAAGCGATATCGCTATGGTAAATGCATGATTTGCTATAAAATAGTTTCTATATGATTTACCAATATTTACCAAGAGATTTGAATGTATAAATAATCTTGTTTTTCCATCATATTACAGTGGTTCAGAATTGTATACGTTTGAATGCGGGTAACAAATGTACTTTTAATTGGAATGGCTAATAACATGCAGTCAAAATTTGAGAAATATTGGGAAACAATGAAAAGATCAATTTTTTTGTTGTACATCGCTATTATGTTGGATCCTCAAAAGAAACTAAGGTTTGTTTTTTTTTTTTCTTTGAAAATTATTTTTGGGTCTGAGGTTGCTAAATCCATGAAAAATGTAGTTGGACAATGTTGTAGACATCTCTTTCATGAGTATAGTAGTACTCGAAGTGGCAGTGGACCAGGATGTACTAGTACTAGCACACAAACTGTCTCGGGCTTGGATGTGATTATTGATTTTCATCCAAATGAAAACGTGGGTGAAGATTTTGTCTATGACACCATTGTTGAGGAATTTGAAAGTGATGCGACTACTACATCTTTCAAGCAGGAGTCATCAGATATTGATATCTATTTGTTGGAAGCCAATGTTAGGAACGAAGGTGATTTTGACATACTATAGTAGTGGAATACGAACAGTGATCGACTTGAGGTTCTTAGTCAATGGCTAAAGATATTTTGGCTATTTTAGTTTCTACTATAGCGTCTGAGTCGATTTTTAGTACCGAAGGACGTATTGTTGATTCATCACATTGCTCATTGGCTCCTAAAACAGTGGATGCTTTCATATGTACTCAAAATTGGCTAAATTTTGATCCAACAGATTTTCAAGTTCAACATGAATTGGAAGAGGCTTCAACATTTGAAGAAGGTATTATACAAATTTTTTAATGATGTGTATTTTATAATTGTAATGTGTAATTTTACTGACCTCTTGAAATTTTCATGATGTTGTCTTTCTCTTCTTATTCTTGATTTTGATTATATAGGGTTCTAGGTGGTTATGGATAATGAAAAAGAACTTGAAGACCTTCCAGATTTTGCAAAGTTGTCAATTATCGATTACTAACTAATGTTAGCCAATACTTATAATATTTGTTTGTATTTGTTGTTAACATTTGTGCAATTCATTTTTGTTTAAGTTGTTTTTTGTGCTAATTGATACATTTAGTATTTTGCACCTTTTTGACATTTAATTGAAGGATTATATTATGCTTCTCTATAAGTAATGTTTGATAATACGAAATGCAATCAGATCAAAGAAGGCACTTTTAATAGTCATATTAACTTCGTTTTCTTAATTATATGCAATGAAAGGAATAAAAGTGGAAGGTTATTTTTGGGACAAGAAAATATTAAAAGTTAGATTACCCTAACTTAAAGTTAAAAGTTAAATTGTAAAATTTAATTTCTTGCATTCAATTGACAGTGTATTACAAATTTAAAATAGTAATTTTTAACAAAATTTAACAAATTAGCAATTATTTATAGAATTATATATTTTTCGCTTTACCCTCATTTTTAGTTACTTTTTTGAAAAATAATGAAATTTTTTCATTTGGAAAAAAAAACGTTAAATAGAGAGGGGCATTAAGAAAAGAATACATGATTTTTTGTATTTTGCAAAGGCATAAAAAGCAAAAAGTGGGAGAAAAAATAAGGTAAATTTATATAAATAAAAGAGAATTTAACTACTATAGCCACATTAGGTTGTCAAATTTTTCATAAATGCCCGAATGGGTTTCAATTTTACACAAATGTAGAGACCAAAAGACCAAACTAACCAGCTTTATTATTAATAAAATATTAAAAAATAGAAAATTGAAATAAGGAAAGTGGACCAAGATTTGCATTTATTAGATATCCTATATAAATATGGTATATGATTAATTATATTATTGTAATATTATAATCAAAATTAACCCATAATTTTTTTTGGTGATTTTGTTAAAAAAAAATTCCTTCATTCGATCTCTCTCTTTGTCTATTATTTCTTATTTCGTTCATCTCCTTCAAATTTTTCCGGTGAGTAAGGGTTTATGGTTATATACAAAATTATTTAGAGTACATGAAAAATATATAGTATATTACGTAGTTCATGCTTCAAAACTTTTTTAGGGTATATGAAAAATATATAGCATATCATGTAGTTCATGCTTCAAAACAATTTTAGGGTATATGAAATATATATAGTATATTATAAAAGATATATTGTATATTATGTAAGTATATGAAAAATATAAAATGTGGAAACGGAAATGTGAAAAAAATAGTTTAAGGAGATTTCTCTAACTGTGTTGTGGATAAAATTGAATAAAGTCAATTTGTAGAAATTATTTAATTTAATAGTATTTTATTAGATTCAACTTTATACCATATTAAAATTATTTCTCCGATATCTATATTAAATGAAAATATAAATCTAAATTATATTTGTTACATTAATTATAAAAGATAAAATAGATAATAAATATGATATAATATAGTTATGGTATTATATTATATTTTTTTTTTAAATCAAATTTATTTATAATTGCTGTGAAGGTTAAAATGGTCTTAAAAAAACACGAAATCTTAATTAAGAAAATAAATGAAATTTTGAGACATCTGTGTAAAATCATCTCTAAAGTAGGTGATTTTTTAAATATTTCTAAATAAAAGAAAAGTTTTAAATATTTATGACCCGTATAACAATTTAAGAAAAGCATATGAAGTCAATTGTTTTTCAATAAATTTCATATTTATCCTTATTGGATTTTGATTGCTGTGGGACAATTTTTCAGTTCTTTTTCTTCTTTTTCTTTGCGATTTATTTTTCTCTTGTTCATGTTATTACTTCTCCTTCTTCATATTTTCACTTCTTGTTTGCAATTTCTTAATTTCTTCTTCCAGAATTTATTCCTTCTTCTTCATTTATCATCTTCTTTTTTTCTTCTTGGTATAAGATTTGAATGATATTAGTGCATAATCTAATTAAACGATCATGTACCAATATTTAACCGATCAATTGTCTATCCTAGATAGACAAAGATAGACCATTATCACTAATAGATCGTTTAGATTTGGTACAAGATCGTTTAAACTGGTATAAGGTTACAAGATCACGTTTAGGCTGGATACAAGGATATAAGATCGTATAGACTTGGTACAAGATCTGACTTGGTCATTTCCATTCCAACTTGTGGTAGGTCGGAGCTGGTTTGGCTGGAAAACTGACTCTAATCGATCGTTGATCACCCCTATTAAAGAGTGTCTATTGCCATGTGTCACTCGCTACATCCCATCTACCTTACCAAATGTCTTTGAAGATACCAACCCTTAGTGCCCAATAATACACCTCATGCTTGCCAAATTGCCTATAAATAGTGACATTTAGTGGATTTTGTAAGTCACACAATATTGGTTTTGAAGTGCATGTCTAAAGCCACATATTATTGTATATAGAGTGTTTTTATGTAAAAATAAGAAAAAGAGTATTTGTAACCTTGTTTTTATGAAATGAAGCAAATTAGAAAGAGTGAAAGGTGAAATTGTTCCTAAAGGAATAAATGAAATATAGATAACAATATATAAGAAAAATTTACATAAATGTAATAAAACCCAAAAATACATACCGCTCATGTAACAAAAAACAAAAGTCCATGAAGTCGGTTAAATATTTTCATAATTTTCAGATTTGTTCTTGAATATTGTGAACAATTCGTCACTTCTCTTTCTTCTTCTTCCTTCTTTGTGATTTCTTCTCTTTCAGATTTTTTCATCTCGTCTTCCAGATTTTTTTTCTTCTATTTTTAAACGATTTATTCTTTTGTTTAAATCTGCTATTTCTTCTTCATCATTTTTGACAAGATTCTTTGAAGCTATTTTACGATTGTTTCAATATTCATCTTCATCTTCCTCATAATCGAGAATATCAAGATCGTTTAAATATCATTTTTAATTATCAACATGATCATTTACCATTATTCAACACAATCGTTTACCATAGTCAACAAAATTCTTTAAATTTGAAGACTTTTTCCCATCATTTAAAACGAACTACACAATCGTGTTGACATGATCTAAACGATCGCTTACCATAATCAACATGATCGTTTAACATAGTTAACATGATCGTTTAGTATAGTTAACACAATTTTTTAGCATGGTGAACACGATCATTAGATTTGAAATTTTTAATGATCATTTATCATAATCAACACGATCAACACGATTGTTTGCCATGATCAACATAACCGTTTAGCATGGTTAACACGATCGTTTAAATTTAAAGTATTTTTCCATCATTAAGAAGGACTACACAATCGTATATCATGACCTAAACGATCGTAGATCATTCATTTAGACTGTAGTACACGATTGTTTAGAAAAATATTGCTTGCGAGCGCATGTGACCAATTAATCGCGTGTTGATTGAATTTTTTTTTTTTGTATTTTCCATTGTGAGTCTGCTGCCTTTTTCTGTTTTCAAAATTTTTCTATACATTGTAAATATTTAACCAGTTTGTTATATTTTTTTTAAAAAAAAAAACCATATTAAAAAGGTATGGTTTGTTTGCAAATATTTTTATTGATAGAATGCTTAATAGTGTATATTTGTAAATATTTTGAGCAATTTTATCATTTAAAATAATATCCCTACTACAAAACCATGTCTTATAATAAAAAAATAAAAAATAAAAAAAATAAAAAAATAAAAAAATAAAAAACTTTCCTTTTCTTAACAACAAAAAAAGGAGAATAGTGGAATGAAGGGAAATATAAGGATGGATTCCCTGACCCGTCGGCTCTTCCATGGGAAATCCCCACGAAAATGGAGATGGATCCTTGTGAGTTGATTCGTTGATGGGAAATCCTTGCTCTATCCGCTATCCTCTCCCTTTAAATGCACGAAGTTGGTCAGGAATGGGGAATTCCTCTGTCTCTATCCTCCTCCTTTGCAAATCCTACTTCTCCTTTTAATATACTACATACCTACTACATGTCAATTTGAAGTACATAACCAAAGTACTATATGTGATTTTAAAAAAAAAAAACAAATATTATGAAAATGTTTATTAAAATTTATAAGAAAAAGTCATTTGGTTGATAATTCTGTGTTTGATGGATGAATATTACTAAGGATAACAGATTGTTTTGTAATAAAAAAAAACCGGTAAAACAAATATCTTTATGAAAAATTGCATCAGATAACAAAAAAATAATATATCTTTTTTTCATATTGCAAATATGACAAATAATTAGATATATGAGAGGGATATCAGAGGGTTATCCGCTTTTAAATTTGCTAATTTTGCAATTTAGAAAATGTAGTGACATTGACCCTATTATCATAAAAAAAATTTTGTTATTTTTACAACCTCTATTTGTATTATCTGATATAATTTATTTGATGGCATGTTTTCACTTAAAAGTTTGCCAATAATTTTTTCATGGGACGTTTATAAAAATAACAAAATAAATTAAAATATTTACAAGTTATAACATAATTCTAAATTCTATCGATGATAGTCACTGATAGGTTCCTATCACTAGTGACTATAAATGTCTATTATTGATAGAATTGGAAAATTTAACTATATGTTGTAAATATTTTGTCAAATTTGGTATTTTTAACAAATTTTCAGTTTTTATTATTAATTTTTCTAGAAAGACACGTTTTTCGTTTTTAAGGAAAATTGTAAAAACCACACTTAAATATGGTAACAGTTGAAATACTTTCAATTATAAAAAATGAACCTTTAAATTTCTAAAAATGTCTAAATTAAACTTTCAATTTTTCATTAATTACAAAAATTGAATTCATAAATAATAAAATTGAACTCTTAAACTTATATAAATGCTACAATTTATACAAGCACCCATATGTTTGAAGGTCGAATTACTTTTTAACTTGAAGGGCTCCATTTTAATTTAAAAGTATAATTGCAAAACCATGTTATACTCTTTCGTAATTTAAACGTTTTTTTTCTAATTAATTGACAACTAAAACCATTCATTTTCTCTTCATATATTATTTCAAAATGAAGGTATTTAAGCTAGTTTATTTTTAAAATTGTAAATATTCATTCAATTAACTAATTGGTTCCTCTACATTACAATGCTTTGTGGAAAAAAAAAAAAAATTTGTCATTCACATTTGTCTCATTGTTCTCACTCAAATTGCTAAATAATGGAGAGAGAGACTTCAAGATCTGATCCAAAAACTTCAATCCTTTTTTCCACTAAAAAATAAGATTGCTTGGAATCTCAACCTCATAAATAAATTAATTACACTAAAGAAGGAAAAAAAATGCTAAATTTTATTAGAATTAACATCCATCTTGTTAAAATGTATAGATAAACCCTCAAATAGTTGAAGATTAATACATTAGAATCTTCAACCTTTCTACATATTATTGTACTAAAAAGTAGTATTAAAATATTATTATTCGTATGGGATATATATTGCTATTCAAAAGTCTACCTTTTTGTTCTCATTTTTATTTAACTTTTTAATTCAGCCCCAATAAAAATAACATATTAAAACTTTTAAAATAAGTAGATTGAATTGTGTATAACAATTCCTAAAAGTTTACAAATATAATAGCTAGTTACAAATATAATATCTAGTTAGTACAGCTAATAGAGTTCAAAAGAACGAGATCTAAATTTTCATATGTATAAAAAAAGTAATTAATTACTATATTTACAATTGTTAATTTAAAAGAGTAACTAACGTTTTATCTGCTAAAAACTATGATTAAATTAGCGATGAAATTCCGAGATGAAGATCCACATGAACAACCCTTCTTCCATTTCATCAAATTTATTTCTGGGTTTGAGATAAAAGAGAGAAAGGATCTCTCATTAACCTAAAAGAAAAAGAAAAACTAACATTCCAAAGACATGAAATCTAGAGAGAGAGAATTAAAGTAAAAAAGAAAAAAAAAAAAAAAGGTTTCAGGACAGACGGAGAGTTGGTTGTTCAAGTAGACGGCGCCGTTTTTGGAAGCTGAGAGAAGTGACCGGCGCCGGAGCCTTCCTGACCGGCTGGATTCTTTGACC

mRNA sequence

TTCCACGATAAACAAAAGATTTCCTTCACTGTGAAGTAGCTGATGTCATCCTTATTTAAGAAGTTCGATGAGTTGATTTAACCTTGCAGCCCAACTGATCTCACGTCCGACAAACCCGATATCGCTATGGTAAATGCATGTTTTAATTGGAATGGCTAATAACATGCAGTCAAAATTTGAGAAATATTGGGAAACAATGAAAAGATCAATTTTTTTGTTGTACATCGCTATTATGTTGGATCCTCAAAAGAAACTAAGGTTTGTTTTTTTTTTTTCTTTGAAAATTATTTTTGGGTCTGAGGTTGCTAAATCCATGAAAAATGTAGTTGGACAATGTTGTAGACATCTCTTTCATGAGTATAGTAGTACTCGAAGTGGCAGTGGACCAGGATGTACTAGTACTAATTTTGTCTATGACACCATTGTTGAGGAATTTGAAAGTGATGCGACTACTACATCTTTCAAGCAGGAGTCATCAGATATTGATATCTATTTGTTGGAAGCCAATGTTAGGAACGAAGGTGATTTTGACATACTATAGTAGTGGAATACGAACAGTGATCGACTTGAGGTTCTTAGTCAATGGCTAAAGATATTTTGGCTATTTTAGTTTCTACTATAGCGTCTGAGTCGATTTTTAGTACCGAAGGACGTATTGTTGATTCATCACATTGCTCATTGGCTCCTAAAACAGTGGATGCTTTCATATGTACTCAAAATTGGCTAAATTTTGATCCAACAGATTTTCAAGTTCAACATGAATTGGAAGAGGCTTCAACATTTGAAGAAGAAAAAGAAAAACTAACATTCCAAAGACATGAAATCTAGAGAGAGAGAATTAAAGTAAAAAAGAAAAAAAAAAAAAAAGAGAAGTGACCGGCGCCGGAGCCTTCCTGACCGGCTGGATTCTTTGACC

Coding sequence (CDS)

TTCCACGATAAACAAAAGATTTCCTTCACTGTGAAGTAGCTGATGTCATCCTTATTTAAGAAGTTCGATGAGTTGATTTAACCTTGCAGCCCAACTGATCTCACGTCCGACAAACCCGATATCGCTATGGTAAATGCATGTTTTAATTGGAATGGCTAATAACATGCAGTCAAAATTTGAGAAATATTGGGAAACAATGAAAAGATCAATTTTTTTGTTGTACATCGCTATTATGTTGGATCCTCAAAAGAAACTAAGGTTTGTTTTTTTTTTTTCTTTGAAAATTATTTTTGGGTCTGAGGTTGCTAAATCCATGAAAAATGTAGTTGGACAATGTTGTAGACATCTCTTTCATGAGTATAGTAGTACTCGAAGTGGCAGTGGACCAGGATGTACTAGTACTAATTTTGTCTATGACACCATTGTTGAGGAATTTGAAAGTGATGCGACTACTACATCTTTCAAGCAGGAGTCATCAGATATTGATATCTATTTGTTGGAAGCCAATGTTAGGAACGAAGGTGATTTTGACATACTATAGTAGTGGAATACGAACAGTGATCGACTTGAGGTTCTTAGTCAATGGCTAAAGATATTTTGGCTATTTTAGTTTCTACTATAGCGTCTGAGTCGATTTTTAGTACCGAAGGACGTATTGTTGATTCATCACATTGCTCATTGGCTCCTAAAACAGTGGATGCTTTCATATGTACTCAAAATTGGCTAAATTTTGATCCAACAGATTTTCAAGTTCAACATGAATTGGAAGAGGCTTCAACATTTGAAGAAGAAAAAGAAAAACTAACATTCCAAAGACATGAAATCTAGAGAGAGAGAATTAAAGTAAAAAAGAAAAAAAAAAAAAAAGAGAAGTGACCGGCGCCGGAGCCTTCCTGACCGGCTGGATTCTTTGACC

Protein sequence

FHDKQKISFTVK*LMSSLFKKFDELI*PCSPTDLTSDKPDIAMVNACFNWNG**HAVKI*EILGNNEKINFFVVHRYYVGSSKETKVCFFFFFENYFWV*GC*IHEKCSWTML*TSLS*V**YSKWQWTRMY*Y*FCL*HHC*GI*K*CDYYIFQAGVIRY*YLFVGSQC*ERR*F*HTIVVEYEQ*ST*GS*SMAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHELEEASTFEEEKEKLTFQRHEI*RERIKVKKKKKKKEK*PAPEPS*PAGFFDX
Homology
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BLAST of Chy2G037970 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWL 243
           +A+D+LAI VST+ASES FS  GR+VD     L  + V+A ICT++W+
Sbjct: 673 IARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWV 720

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BLAST of Chy2G037970 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.8e-05
Identity = 33/94 (35.11%), Postives = 54/94 (57.45%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWL-------NFDPT 254
           +A+D+LAI VST+ASES FS  GR+VD     L  + V+A ICT++W+        + PT
Sbjct: 704 IARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEIVEALICTKDWVAASRKGATYFPT 763

Query: 255 ---DFQVQHELEEAST-----FEEEKEKLTFQRH 274
              D +V   +  A+T      +E+++ + F ++
Sbjct: 764 MIGDLEVLDSVIAAATNHENHMDEDEDAIEFSKN 797

[Close]
BLAST of Chy2G037970 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.6e-04
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWL 243
           MA+DIL+I VS  A + +F  E R +D    SL P+TV+A IC + WL
Sbjct: 627 MARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674

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BLAST of Chy2G037970 vs. ExPASy TrEMBL
Match: A0A5A7USD9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00310 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-22
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHE 254
           MA+DILAILVSTIASES FST GR+VDSS CSLAPK V+A ICTQNWLN DP DFQ+QHE
Sbjct: 60  MARDILAILVSTIASESAFSTGGRVVDSSRCSLAPKIVEALICTQNWLNSDPIDFQIQHE 119

Query: 255 LEEASTFEE 264
           LEEAS FEE
Sbjct: 120 LEEASKFEE 128

[Close]
BLAST of Chy2G037970 vs. ExPASy TrEMBL
Match: E5GBS6 (Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-21
Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHE 254
           MA+DILAI VST+ASES FST GR+VDSSHCSLAPKTV+A ICTQNWLNFDP   Q QHE
Sbjct: 152 MARDILAISVSTVASESTFSTGGRVVDSSHCSLAPKTVEALICTQNWLNFDPIHLQFQHE 211

Query: 255 LEEASTFEE 264
           L+EAS FE+
Sbjct: 212 LKEASKFEK 220

[Close]
BLAST of Chy2G037970 vs. ExPASy TrEMBL
Match: A0A1S4DZ17 (uncharacterized protein LOC107991203 OS=Cucumis melo OX=3656 GN=LOC107991203 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-21
Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHE 254
           MA+DILAI VST+ASES FST GR+VDSSHCSLAPKTV+A ICTQNWLNFDP   Q QHE
Sbjct: 127 MARDILAISVSTVASESTFSTGGRVVDSSHCSLAPKTVEALICTQNWLNFDPIHLQFQHE 186

Query: 255 LEEASTFEE 264
           L+EAS FE+
Sbjct: 187 LKEASKFEK 195

[Close]
BLAST of Chy2G037970 vs. ExPASy TrEMBL
Match: A0A5A7VM38 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00450 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.2e-21
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHE 254
           MA+DILAILVST+ASES FST GR+VD S CSLAPKTV+A ICTQNWLN DP   QVQHE
Sbjct: 282 MARDILAILVSTVASESAFSTRGRVVDLSRCSLAPKTVEALICTQNWLNSDPIHLQVQHE 341

Query: 255 LEEASTFEE 264
           LEEAS FEE
Sbjct: 342 LEEASKFEE 350

[Close]
BLAST of Chy2G037970 vs. ExPASy TrEMBL
Match: A0A5D3DWM7 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00370 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.2e-21
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHE 254
           MA+DILAILVST+ASES FST GR+VD S CSLAPKTV+A ICTQNWLN DP   QVQHE
Sbjct: 282 MARDILAILVSTVASESAFSTRGRVVDLSRCSLAPKTVEALICTQNWLNSDPIHLQVQHE 341

Query: 255 LEEASTFEE 264
           LEEAS FEE
Sbjct: 342 LEEASKFEE 350

[Close]
BLAST of Chy2G037970 vs. NCBI nr
Match: KAA0058833.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 116 bits (290), Expect = 6.73e-28
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHE 254
           MA+DILAILVSTIASES FST GR+VDSS CSLAPK V+A ICTQNWLN DP DFQ+QHE
Sbjct: 60  MARDILAILVSTIASESAFSTGGRVVDSSRCSLAPKIVEALICTQNWLNSDPIDFQIQHE 119

Query: 255 LEEASTFEE 263
           LEEAS FEE
Sbjct: 120 LEEASKFEE 128

[Close]
BLAST of Chy2G037970 vs. NCBI nr
Match: XP_016901224.1 (PREDICTED: uncharacterized protein LOC107991203 [Cucumis melo])

HSP 1 Score: 112 bits (280), Expect = 1.17e-25
Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHE 254
           MA+DILAI VST+ASES FST GR+VDSSHCSLAPKTV+A ICTQNWLNFDP   Q QHE
Sbjct: 127 MARDILAISVSTVASESTFSTGGRVVDSSHCSLAPKTVEALICTQNWLNFDPIHLQFQHE 186

Query: 255 LEEASTFE 262
           L+EAS FE
Sbjct: 187 LKEASKFE 194

[Close]
BLAST of Chy2G037970 vs. NCBI nr
Match: ADN33918.1 (transposase [Cucumis melo subsp. melo])

HSP 1 Score: 112 bits (280), Expect = 2.12e-25
Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHE 254
           MA+DILAI VST+ASES FST GR+VDSSHCSLAPKTV+A ICTQNWLNFDP   Q QHE
Sbjct: 152 MARDILAISVSTVASESTFSTGGRVVDSSHCSLAPKTVEALICTQNWLNFDPIHLQFQHE 211

Query: 255 LEEASTFE 262
           L+EAS FE
Sbjct: 212 LKEASKFE 219

[Close]
BLAST of Chy2G037970 vs. NCBI nr
Match: TYK22502.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (268), Expect = 2.95e-25
Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHE 254
           MA+DILAI VST+ASES FS  GR+VD S CSLAPKT++A ICTQNWLNFDP   Q+QHE
Sbjct: 12  MARDILAIPVSTVASESTFSYGGRVVDPSRCSLAPKTMEALICTQNWLNFDPIHLQIQHE 71

Query: 255 LEEASTFEE 263
           LEEAS FEE
Sbjct: 72  LEEASKFEE 80

[Close]
BLAST of Chy2G037970 vs. NCBI nr
Match: TYK19372.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (270), Expect = 2.99e-25
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWLNFDPTDFQVQHE 254
           MA+ ILAI VS +ASES+FS EGR+VDSS CSLAPKTV+A ICTQNWLN DP DFQ+QHE
Sbjct: 63  MARVILAIAVSIVASESVFSIEGRVVDSSGCSLAPKTVEALICTQNWLNSDPIDFQIQHE 122

Query: 255 LEEASTF 261
           LEEAS F
Sbjct: 123 LEEASKF 129

[Close]
BLAST of Chy2G037970 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-05
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0 

Query: 195 MAKDILAILVSTIASESIFSTEGRIVDSSHCSLAPKTVDAFICTQNWL 243
           MA+DIL+I VS  A + +F  E R +D    SL P+TV+A IC + WL
Sbjct: 627 MARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674

The following BLAST results are available for this feature:
BLAST of Chy2G037970 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P030102.8e-0652.08Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1[more]
P087701.8e-0535.11Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2[more]
Q9M2N52.6e-0447.92Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=... [more]
BLAST of Chy2G037970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7USD92.2e-2282.61Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00310 PE... [more]
E5GBS63.2e-2178.26Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A1S4DZ173.2e-2178.26uncharacterized protein LOC107991203 OS=Cucumis melo OX=3656 GN=LOC107991203 PE=... [more]
A0A5A7VM384.2e-2179.71Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5D3DWM74.2e-2179.71Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
BLAST of Chy2G037970 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058833.16.73e-2882.61transposase [Cucumis melo var. makuwa][more]
XP_016901224.11.17e-2579.41PREDICTED: uncharacterized protein LOC107991203 [Cucumis melo][more]
ADN33918.12.12e-2579.41transposase [Cucumis melo subsp. melo][more]
TYK22502.12.95e-2575.36transposase [Cucumis melo var. makuwa][more]
TYK19372.12.99e-2577.61transposase [Cucumis melo var. makuwa][more]
BLAST of Chy2G037970 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G42170.11.9e-0547.92BED zinc finger ;hAT family dimerisation domain [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 169..218
e-value: 5.0E-13
score: 48.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..278
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 102..224
NoneNo IPR availablePANTHERPTHR23272:SF145ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKEcoord: 102..224
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 170..221

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G037970.1Chy2G037970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0046983 protein dimerization activity