Chy2G037950 (gene) Cucumber (hystrix) v1

Overview
NameChy2G037950
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 13228867 .. 13229078 (+)
RNA-Seq ExpressionChy2G037950
SyntenyChy2G037950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGATACGTGACAGAAATTCCCAAAGCGATCTCTCATGGAATTGAAGCAATGCGTGGGAACTCCAGGGTGAGGGCGATGATGGATTATTTGTGTGTTTGGGCAGCGTGTGATTTCCCACAGAAACAGAGCAGGGTGGCGCGAATGACTAAACCATGCTCTAAACAAGTGGTCGGCGCGAGGCCTGAGCAAGGCGGTAGGCGTCAACG

mRNA sequence

ATGGACGGATACGTGACAGAAATTCCCAAAGCGATCTCTCATGGAATTGAAGCAATGCGTGGGAACTCCAGGGTGAGGGCGATGATGGATTATTTGTGTGTTTGGGCAGCGTGTGATTTCCCACAGAAACAGAGCAGGGTGGCGCGAATGACTAAACCATGCTCTAAACAAGTGGTCGGCGCGAGGCCTGAGCAAGGCGGTAGGCGTCAACG

Coding sequence (CDS)

ATGGACGGATACGTGACAGAAATTCCCAAAGCGATCTCTCATGGAATTGAAGCAATGCGTGGGAACTCCAGGGTGAGGGCGATGATGGATTATTTGTGTGTTTGGGCAGCGTGTGATTTCCCACAGAAACAGAGCAGGGTGGCGCGAATGACTAAACCATGCTCTAAACAAGTGGTCGGCGCGAGGCCTGAGCAAGGCGGTAGGCGTCAACG

Protein sequence

MDGYVTEIPKAISHGIEAMRGNSRVRAMMDYLCVWAACDFPQKQSRVARMTKPCSKQVVGARPEQGGRRQX
Homology
[Close]
BLAST of Chy2G037950 vs. ExPASy TrEMBL
Match: A0A0A0M2X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629030 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28
Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0 

Query: 1  MDGYVTEIPKAISHGIEAMRGNSRVRAMMDYLCVWAACDFPQKQSRVARMTKPCSKQVVG 60
          M+GYVTEIPKAISHGIEAMRGNSRVRAMMDYLCVWA CDFPQK+SRVARMTKP SKQVVG
Sbjct: 1  MNGYVTEIPKAISHGIEAMRGNSRVRAMMDYLCVWAGCDFPQKESRVARMTKPWSKQVVG 60

Query: 61 ARPEQGGRRQ 71
           R EQGGRRQ
Sbjct: 61 TRREQGGRRQ 70

[Close]
BLAST of Chy2G037950 vs. NCBI nr
Match: KAE8653530.1 (hypothetical protein Csa_023630, partial [Cucumis sativus])

HSP 1 Score: 120 bits (300), Expect = 8.20e-34
Identity = 58/63 (92.06%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 8  IPKAISHGIEAMRGNSRVRAMMDYLCVWAACDFPQKQSRVARMTKPCSKQVVGARPEQGG 67
          IPKAISHGIEAMRGNSRVRAMMDYLCVWA CDFPQK+SRVARMTKP SKQVVG R EQGG
Sbjct: 1  IPKAISHGIEAMRGNSRVRAMMDYLCVWAGCDFPQKESRVARMTKPWSKQVVGTRREQGG 60

Query: 68 RRQ 70
          RRQ
Sbjct: 61 RRQ 63

The following BLAST results are available for this feature:
BLAST of Chy2G037950 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G037950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M2X51.8e-2891.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629030 PE=4 SV=1[more]
BLAST of Chy2G037950 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8653530.18.20e-3492.06hypothetical protein Csa_023630, partial [Cucumis sativus][more]
BLAST of Chy2G037950 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G037950.1Chy2G037950.1mRNA