Chy2G037380 (gene) Cucumber (hystrix) v1

Overview
NameChy2G037380
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPlant transposase
LocationchrH02: 11856726 .. 11856875 (-)
RNA-Seq ExpressionChy2G037380
SyntenyChy2G037380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGGTTGTGGAGAGTAAGCAAGTCTCAATGTCAAGTTCGAAAAGCATCAAGTGATGAGGAGTTGACTAATCTTAAGCCAAATAATATAAACTCAACGCATGATTGGATGGACTTTGTGAAGGAGAAAACAAGTGCAGTATTTAAG

mRNA sequence

ATGGGTGGGTTGTGGAGAGTAAGCAAGTCTCAATGTCAAGTTCGAAAAGCATCAAGTGATGAGGAGTTGACTAATCTTAAGCCAAATAATATAAACTCAACGCATGATTGGATGGACTTTGTGAAGGAGAAAACAAGTGCAGTATTTAAG

Coding sequence (CDS)

ATGGGTGGGTTGTGGAGAGTAAGCAAGTCTCAATGTCAAGTTCGAAAAGCATCAAGTGATGAGGAGTTGACTAATCTTAAGCCAAATAATATAAACTCAACGCATGATTGGATGGACTTTGTGAAGGAGAAAACAAGTGCAGTATTTAAG

Protein sequence

MGGLWRVSKSQCQVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK
Homology
BLAST of Chy2G037380 vs. ExPASy TrEMBL
Match: A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.0e-10
Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 1   MGGLWRVSKSQ--CQVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK 51
           MGGLWR SKS+   ++ KAS+DEEL  LKP+NI+S HDW DF+K KTSA FK
Sbjct: 195 MGGLWRASKSRLVSKIGKASNDEELNKLKPDNISSMHDWNDFIKHKTSATFK 246

BLAST of Chy2G037380 vs. ExPASy TrEMBL
Match: A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-09
Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 0

Query: 1   MGGLWRVSKSQ--CQVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK 51
           MGGLWR SKS+   ++ +AS+DEEL+ LKP+NI+S HDW DF+K KTSA FK
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEELSKLKPDNISSMHDWNDFIKHKTSATFK 246

BLAST of Chy2G037380 vs. ExPASy TrEMBL
Match: A0A5A7UI65 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11091G00020 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-09
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 1   MGGLWRVSKSQ--CQVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK 51
           MGGLWR SKS+   ++ +AS+DEEL  LKP+NI+S HDW DF+K KTSA FK
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIKHKTSATFK 246

BLAST of Chy2G037380 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-09
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 1   MGGLWRVSKSQ--CQVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK 51
           MGGLWR SKS+   ++ +AS+DEEL  LKP+NI+S HDW DF+K KTSA FK
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIKHKTSATFK 246

BLAST of Chy2G037380 vs. ExPASy TrEMBL
Match: A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-09
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 1   MGGLWRVSKSQ--CQVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK 51
           MGGLWR SKS+   ++ +AS+DEEL  LKP+NI+S HDW DF+K KTSA FK
Sbjct: 179 MGGLWRASKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIKHKTSATFK 230

BLAST of Chy2G037380 vs. NCBI nr
Match: KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 5.61e-13
Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 1   MGGLWRVSKSQC--QVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK 50
           MGGLWR SKS+   ++ KAS+DEEL  LKP+NI+S HDW DF+K KTSA FK
Sbjct: 195 MGGLWRASKSRLVSKIGKASNDEELNKLKPDNISSMHDWNDFIKHKTSATFK 246

BLAST of Chy2G037380 vs. NCBI nr
Match: KAA0053956.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.06e-12
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 1   MGGLWRVSKSQC--QVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK 50
           MGGLWR SKS+   ++ +AS+DEEL  LKP+NI+S HDW DF+K KTSA FK
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIKHKTSATFK 246

BLAST of Chy2G037380 vs. NCBI nr
Match: KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 1.37e-12
Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 0

Query: 1   MGGLWRVSKSQC--QVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK 50
           MGGLWR SKS    ++ +AS+DEEL  LKP+NI+S HDW DF+K KTSA FK
Sbjct: 195 MGGLWRASKSHLVSKIGEASNDEELNKLKPDNISSMHDWNDFIKHKTSATFK 246

BLAST of Chy2G037380 vs. NCBI nr
Match: KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 1.42e-12
Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 0

Query: 1   MGGLWRVSKSQC--QVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK 50
           MGGLWR SKS+   ++ +AS+DEEL+ LKP+NI+S HDW DF+K KTSA FK
Sbjct: 195 MGGLWRASKSRLVSKIGEASNDEELSKLKPDNISSMHDWNDFIKHKTSATFK 246

BLAST of Chy2G037380 vs. NCBI nr
Match: KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.88e-12
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0

Query: 1   MGGLWRVSKSQC--QVRKASSDEELTNLKPNNINSTHDWMDFVKEKTSAVFK 50
           MGGLWR SKS+   ++ +AS+DEEL  LKP+NI+S HDW DF+K KTSA FK
Sbjct: 179 MGGLWRASKSRLVSKIGEASNDEELNKLKPDNISSMHDWNDFIKHKTSATFK 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TLJ26.0e-1065.38Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003... [more]
A0A5A7UBP21.3e-0963.46Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0... [more]
A0A5A7UI651.8e-0963.46Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11091G... [more]
A0A5A7SRN71.8e-0963.46Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00... [more]
A0A5A7UNU11.8e-0963.46Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
Match NameE-valueIdentityDescription
KAA0042856.15.61e-1365.38Plant transposase [Cucumis melo var. makuwa][more]
KAA0053956.11.06e-1263.46Plant transposase [Cucumis melo var. makuwa][more]
KAA0041269.11.37e-1263.46Plant transposase [Cucumis melo var. makuwa][more]
KAA0051001.11.42e-1263.46Plant transposase [Cucumis melo var. makuwa][more]
KAA0056267.11.88e-1263.46uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G037380.1Chy2G037380.1mRNA