Chy2G034890 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G034890
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	V-type proton ATPase subunit e1
Location	chrH02: 8852275 .. 8854158 (+)
RNA-Seq Expression	Chy2G034890
Synteny	Chy2G034890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACAGAGGGGATTAACAATGGGATTCTTGATCACATCCCTGATTTTCTCCGTGATTGGAGTTATCGCTTGTTTTTGCACCCTAATTTGCTGTAATAGAGGCGCTTCAACTAATTTGTAAACTCCCTTGTTCTTTATCGATTCTCTTTCTCTAATTTCATACTTGTCTTGGGTTGTGGATCTAGAGGAAATTAGTTCAGCTGATACATCATTTAACTCGGTCATAAACTATTTGTTTTTACTTATAACTATGTTCGATTTTCATATTCTATGCAACTTTGTTAGGTTTTGTTGCTCATAATCGTTTTGATTAGGTTGTACTGTAGCCAAATCCTTGTGTTGTAGACATTTAATCCTTTTTTTTTTCTTTTTGGTATTTATCCAATGACTGCCATTTTTTTATACTGAAGATTTAGGCGCTTGTATTTGTGTCTAAGCTGGTATTATCAAGCGCTATTGATATTGTAATATGAGATTCTATGATTTAATATAGCAATGTACAGGGAAGATGTATGGGAGATTGAGTAGGATGGAACAATATTGACAAGAGATGTGAAATTTGAAAACGCTTGATAGTCAATGAAGGATGTCAGGATTTCTATAATATGTTGTTACTTTAGTTGAGGAAACGCAACGTCATTTTGGAAAATGATTGATTGGAATTTATCTTGTCGAACTATGTTGTTCTTGGTCTAAGTATACAAATGTTTTCTATCTTGGTGTTGAGGGTATGTCATTGGTAAGCTTAATGATAAAGTTTTTTTTGTGGTTTGACAACTGATCAGAACTTAAAATGTACTCACTAAAACATTCTTAATCCTTGTTTTTCTAGCCTCTCCCTGGTTGCTAGTCTTTGCAGCCACATCAATACTCACCCTTGGAACAGTGTTATATGAGAGATGAAAGCCTCTTATTAAGTCTTATAGCGGTCTAAATTTTGTTCAATTCCTTAAAAAGGTTATATTTGCTTGCTTCATCAGGCACTTTATGGTTAACAACAAAAATTAGGAAAGACTATTGATCATGCATCTGACTTCCTTGGTATCTTAATAGTTATTTGAAGACCTCTTAGCCATTCAAACAATTGAATAGTTATGTTATTTTTTAACCATTAACCCCTTAACATTTGCGTAATTTTTCAAAGTATTTTTATAATTTTGCATTGGACTCATGCATTGGCTAATTTGCTATTCTTGAATGCAGGTTTCATCTTACTTTGATCATTACTGCAACAATATGCTGCTGGATGATGTAAGTTTTTTGTGTCTTAACTATTTATGAAATGTCTATTGGTAGATCACGTTGGATGTGGTTGCGCGCAATATTATTTATTGACTTTTATTGACAATGGACCTCCAAATGCCTCTTTACTGAAATGTTCAAATCTTTGATGAAGTTTCAGTCAGAGAAACTTACAAAATCCTTGTTATGGTACTGGATTCCATCTAAAATTGACTGGCTACCGTTTTTTGTTTTTTTTCATCTCCATCTAACCAGAATGTACAATTATAGAACATAGGCTTCTCATTGTGAAATGATCCAGCCTAGCATCAATAAGCCTTTCATAACCCAGCCTAGCATCAATAAGCCTCTAGGTTCAGTTTTCACCCATGATTTTTCCAGACATTTTGTTGAAGAATAGTCTCTATGTCTGTTATGTATCCTTTTAGATATTATAGATCACTTTCTGAAACCTGTTATTGAATCTATAAACTGAGCTACTCTTGCCACAATATCTATTATTTTATTACTAAACACTAAATATGTATAATGTGTAATGACTGATGATGTTTTTTCTTTGCATTTGTTTGAATCTAGGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCGATTCTGAATGACTCGGAATG

mRNA sequence

CGAACAGAGGGGATTAACAATGGGATTCTTGATCACATCCCTGATTTTCTCCGTGATTGGAGTTATCGCTTGTTTTTGCACCCTAATTTGCTGTTTCATCTTACTTTGATCATTACTGCAACAATATGCTGCTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCGATTCTGAATGACTCGGAATG

Coding sequence (CDS)

CGAACAGAGGGGATTAACAATGGGATTCTTGATCACATCCCTGATTTTCTCCGTGATTGGAGTTATCGCTTGTTTTTGCACCCTAATTTGCTGTTTCATCTTACTTTGATCATTACTGCAACAATATGCTGCTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCGATTCTGAATGACTCGGAATG

Protein sequence

RTEGINNGILDHIPDFLRDWSYRLFLHPNLLFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSEX

Homology

[Close]

BLAST of Chy2G034890 vs. ExPASy Swiss-Prot
Match: Q9FLN5 (V-type proton ATPase subunit e1 OS=Arabidopsis thaliana OX=3702 GN=VHA-e1 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-11
Identity = 30/38 (78.95%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 69
          L HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 33 LLHLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

[Close]

BLAST of Chy2G034890 vs. ExPASy Swiss-Prot
Match: Q9SZ13 (V-type proton ATPase subunit e2 OS=Arabidopsis thaliana OX=3702 GN=VHA-e2 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.2e-11
Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 69
          L HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 33 LLHLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

[Close]

BLAST of Chy2G034890 vs. ExPASy TrEMBL
Match: A0A6A5N6Y3 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00014548 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.4e-17
Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 0


Query: 7  NGILDHIPDFLRDWSYRLFLHPNLLFHLTLIITATICCWMMWAIVYLAQMKPLIVPILND 66
          +G LD+  +    W  R+ LHPNLLFHLTL+ITATICCWMMWAIVY+AQMKPLIVPILN+
Sbjct: 26 HGFLDNDANLRSYWDNRVSLHPNLLFHLTLVITATICCWMMWAIVYMAQMKPLIVPILNE 85

Query: 67 SE 69
           E
Sbjct: 86 GE 87

[Close]

BLAST of Chy2G034890 vs. ExPASy TrEMBL
Match: A0A0A0K8A5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G085210 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 69
          LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of Chy2G034890 vs. ExPASy TrEMBL
Match: A0A6J1CCR8 (V-type proton ATPase subunit e1 OS=Momordica charantia OX=3673 GN=LOC111010390 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 69
          LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of Chy2G034890 vs. ExPASy TrEMBL
Match: A0A1S3BIY2 (V-type proton ATPase subunit e1 OS=Cucumis melo OX=3656 GN=LOC103490117 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 69
          LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of Chy2G034890 vs. ExPASy TrEMBL
Match: A0A6J1IFJ9 (V-type proton ATPase subunit e1-like OS=Cucurbita maxima OX=3661 GN=LOC111476795 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.0e-11
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 69
          LFHLTLI TATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LFHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of Chy2G034890 vs. NCBI nr
Match: KGN66617.2 (hypothetical protein Csa_023631, partial [Cucumis sativus])

HSP 1 Score: 142 bits (357), Expect = 1.67e-42
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  RTEGINNGILDHIPDFLRDWSYRLFLHPNLLFHLTLIITATICCWMMWAIVYLAQMKPLI 60
          RTEGINNGILDHIPDFLRDWS+RLFLHPNLLFHLTLIITATICCWMMWAIVYLAQMKPLI
Sbjct: 1  RTEGINNGILDHIPDFLRDWSHRLFLHPNLLFHLTLIITATICCWMMWAIVYLAQMKPLI 60

Query: 61 VPILNDSE 68
          VPILNDSE
Sbjct: 61 VPILNDSE 68

[Close]

BLAST of Chy2G034890 vs. NCBI nr
Match: KAF1881797.1 (hypothetical protein Lal_00014548 [Lupinus albus])

HSP 1 Score: 94.0 bits (232), Expect = 3.35e-23
Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 0


Query: 7  NGILDHIPDFLRDWSYRLFLHPNLLFHLTLIITATICCWMMWAIVYLAQMKPLIVPILND 66
          +G LD+  +    W  R+ LHPNLLFHLTL+ITATICCWMMWAIVY+AQMKPLIVPILN+
Sbjct: 26 HGFLDNDANLRSYWDNRVSLHPNLLFHLTLVITATICCWMMWAIVYMAQMKPLIVPILNE 85

Query: 67 SE 68
           E
Sbjct: 86 GE 87

[Close]

BLAST of Chy2G034890 vs. NCBI nr
Match: XP_008447705.1 (PREDICTED: V-type proton ATPase subunit e1 [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 5.33e-17
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 68
          LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of Chy2G034890 vs. NCBI nr
Match: XP_038899943.1 (V-type proton ATPase subunit e1-like [Benincasa hispida] >XP_038899944.1 V-type proton ATPase subunit e1-like [Benincasa hispida])

HSP 1 Score: 77.8 bits (190), Expect = 5.33e-17
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 68
          LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of Chy2G034890 vs. NCBI nr
Match: XP_004151389.1 (V-type proton ATPase subunit e1 [Cucumis sativus] >XP_031744853.1 V-type proton ATPase subunit e1 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 5.33e-17
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 68
          LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 33 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of Chy2G034890 vs. TAIR 10
Match: AT5G55290.1 (ATPase, V0 complex, subunit E )

HSP 1 Score: 69.3 bits (168), Expect = 1.4e-12
Identity = 30/38 (78.95%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 69
          L HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 33 LLHLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

[Close]

BLAST of Chy2G034890 vs. TAIR 10
Match: AT5G55290.2 (ATPase, V0 complex, subunit E )

HSP 1 Score: 69.3 bits (168), Expect = 1.4e-12
Identity = 30/38 (78.95%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 69
          L HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 33 LLHLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

[Close]

BLAST of Chy2G034890 vs. TAIR 10
Match: AT4G26710.1 (ATPase, V0 complex, subunit E )

HSP 1 Score: 68.2 bits (165), Expect = 3.0e-12
Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 69
          L HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 33 LLHLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

[Close]

BLAST of Chy2G034890 vs. TAIR 10
Match: AT4G26710.2 (ATPase, V0 complex, subunit E )

HSP 1 Score: 68.2 bits (165), Expect = 3.0e-12
Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 0


Query: 31 LFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 69
          L HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 33 LLHLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

The following BLAST results are available for this feature:

BLAST of Chy2G034890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLN5	1.9e-11	78.95	V-type proton ATPase subunit e1 OS=Arabidopsis thaliana OX=3702 GN=VHA-e1 PE=3 S...	[more]
Q9SZ13	4.2e-11	78.95	V-type proton ATPase subunit e2 OS=Arabidopsis thaliana OX=3702 GN=VHA-e2 PE=3 S...	[more]

BLAST of Chy2G034890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5N6Y3	5.4e-17	70.97	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00014548 PE=3 SV=1	[more]
A0A0A0K8A5	5.2e-12	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G085210 PE=3 SV=1	[more]
A0A6J1CCR8	5.2e-12	100.00	V-type proton ATPase subunit e1 OS=Momordica charantia OX=3673 GN=LOC111010390 P...	[more]
A0A1S3BIY2	5.2e-12	100.00	V-type proton ATPase subunit e1 OS=Cucumis melo OX=3656 GN=LOC103490117 PE=3 SV=...	[more]
A0A6J1IFJ9	2.0e-11	97.37	V-type proton ATPase subunit e1-like OS=Cucurbita maxima OX=3661 GN=LOC111476795...	[more]

BLAST of Chy2G034890 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66617.2	1.67e-42	98.53	hypothetical protein Csa_023631, partial [Cucumis sativus]	[more]
KAF1881797.1	3.35e-23	70.97	hypothetical protein Lal_00014548 [Lupinus albus]	[more]
XP_008447705.1	5.33e-17	100.00	PREDICTED: V-type proton ATPase subunit e1 [Cucumis melo]	[more]
XP_038899943.1	5.33e-17	100.00	V-type proton ATPase subunit e1-like [Benincasa hispida] >XP_038899944.1 V-type ...	[more]
XP_004151389.1	5.33e-17	100.00	V-type proton ATPase subunit e1 [Cucumis sativus] >XP_031744853.1 V-type proton ...	[more]

BLAST of Chy2G034890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55290.1	1.4e-12	78.95	ATPase, V0 complex, subunit E	[more]
AT5G55290.2	1.4e-12	78.95	ATPase, V0 complex, subunit E	[more]
AT4G26710.1	3.0e-12	78.95	ATPase, V0 complex, subunit E	[more]
AT4G26710.2	3.0e-12	78.95	ATPase, V0 complex, subunit E	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008389	ATPase, V0 complex, subunit e1/e2	PFAM	PF05493	ATP_synt_H	coord: 28..65 e-value: 6.8E-16 score: 58.5
IPR008389	ATPase, V0 complex, subunit e1/e2	PANTHER	PTHR12263	VACUOLAR ATP SYNTHASE SUBUNIT H	coord: 31..68
None	No IPR available	PANTHER	PTHR12263:SF9	V-TYPE PROTON ATPASE SUBUNIT E2	coord: 31..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G034890.1	Chy2G034890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
molecular_function	GO:0015078	proton transmembrane transporter activity