Chy2G034850 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G034850
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Beta-mannosyltransferase
Location	chrH02: 8799318 .. 8801927 (-)
RNA-Seq Expression	Chy2G034850
Synteny	Chy2G034850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGACCCACGAGCGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAAACGCTTCAAGGTCTTATGGCGGGTTCTATTGATCTCCAATTTTGCTCTTTCAGGTTCACTCTTCTATCTCCTCCTCGTACATTTTCCTTTTTCCTCGCATCCTGTGATGGGGTATTTTTCTTTAATCCGAATCTCGATCTTGAACTTCCCAGATCCTGAAATGACTTTTGGAAATGAAAAAAAAATGGAGTTTGTGATGGAAATAATCTGTATGTTGAATGTTTTTGTTTTTGTTTTTGCACGCCAGGTGTTTGATGTAATGACTGTGATGGATTTCTTTGTTTAGTTGTAAAATATGTTGCTAGTTGCTTCTACTGCTGTGATTGGTTTGTGGAATCTCTTTGTTTATGTTGTCTGGATGATTCTTGCTTGGAAGAAAGTTGTTAATTTCATTAGTTCATACTTCCGATGTACGAGATTTATAGCCTGAGAGATAGAGGATTAGTAACACCCAAAAGTTGATATTAATAGAGAGAAATGTATGACACACGCAGGACTATTGAATTCGATATGTGCTGATCTTTGTGTTTGAGATTGCTGAGAAAATGTGTCAATTTTCGTTGAATGAGGACTCTCATGATGTGATATGCTATGGCTACTATAACATTGTTGCCTATGCATAAAAGTTGGCTTGTAAAGATTGACATTTTTTCTTTCTTAGTTCCTCCAGTCTGATCTTACCTTCTATATGCTACACTGTTATTCATGAATTTCAATAGTAGAGCATGACTCTAAGCAGCGGGAAAGGTTTCTTTGAAGATGTGGCATGAATCTCATTTTAAAAGAGAGGGATCGGATATTCATTATAGTGTAAGTGTTGTAAGCTAGAAAATTAAGGTTAGGTTAGAGAGTCATTTGGGCCTCGTTTAGTAACTATTTGGTTTTTGAAAATTAATATATTTTCTCTATTATGATGGTTTCATCTTTCCTAAGTAAAATAATTGAATTCTTTGTTAAATTCCAAAAACATAAAATAAGTTTTTTAAACTATTTTTTTAGTTTTCAAAAATTGGTTTGTACGGTAGAATGTAGATAACTAAGCAAGAAATTTAGGGATGGAAGGACTCTGTTTATAGGTTTAATTATCAAAAAATAAAAACCAAAAACTAATAGTTACTAAGCGGGACATTGGTTTTTTGTTTTTGAAAATTAAGCTTATAAATACTACTTCCTCCTATAGATCTATTTGTAATGTTGTTATCTATAGATCTATTTGTAATGTTGTTATCTACTTTTTATTGATGCTTTCAAATATCAAGCCAATTTTTTAAATTAAAAACAAGACTGCATTTAAAATTTTCTATTCGTTTTTGGAAGGTGAATAAGAACTCATACCATTCTTTAAGAAAGTTCAAATCTATAGCATGGAAATTTACAGGAAACAAATATAAATTTCAAAAACCGAAAATTAAAATCAAAATAGTAGGCTTAAACTTGTGGTTTTCTAACTAAAAAACCCGAACCAAAGAGTGAAGGAATGCCTATTCTATCTTGAAGTCACGTGATCCTCGATCTGATTAGTCTATGAATTGGCATCAATCAGTTTGGGAACGTAGTTGCTATCGTTAACCAGCAGAAAAGAAAAGAAAGGATTCTTATTTCTCGTAGAACATCTCAAGTCAGATACATTACCAATCTGAGAGTCGGGGAAGGCACAATATTTCTTTTTTATTAGATCTGTCCAATTCTTATATATCTTGCAAGATTTCTTTATATTTCAAATAAATGGAGTGACATTAACTTCAAGCAGGAGAAAGAGGAAGATGTAATCTCTTCAATTTCTCAACTAAGTTAGGTTCAACTTTAGATGATTCCTACCTTATTTTCTCGAATGGTTTGGGTTAGTTGATAATTGGTTCATTGATGATAAGGTAATAACCAAGATCACCTATTCAATTTCCTTTCCAAAGTGAGCGTAGGAGTCTTAATCTGAAGTCTAGCTATATACTGTCTTGCGTTTCTCTATGAAATGATCATAGCTCTCTTTTTTTCTTCATTACATTGTGCTTGAAACTAGAATATTCGTATAAGAGACATTTACTTCCGTCACCCGCCATGCAATTGAATTTACCTTAATGATGTTAAACATTAGTTGTCAGAGTGAGCTTAGCTCAACATAAACTAGCATGACCTTCCTTAGAGGAGGTCGGATGTTTGACTTCCCACCTCAATTGTTGTTACGCAATTAAGACATCTACTCCTTCCTACGAGACCTTTAAACCCCTTCGTTTCACCCACATTTTTTGTCCAGTTAAGAAAAACATTAAACATGAGTTTGCAACTGATGTGTATTATTTCATGCATTGCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATCAGCTGGAGAATGATCAAGTAGAAAAACAAAGTGATGGTGAAATTATTACAGAAATCCCTTCAACAATTATGGTGGATACCACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAAGGGGTGGTTAGTGGTTGGAGAGAAAAGTTAGGATTTAGTAGAAAAGTGAATTGA

mRNA sequence

ATGACGGACCCACGAGCGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAAACGCTTCAAGGTCTTATGGCGGGTTCTATTGATCTCCAATTTTGCTCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATCAGCTGGAGAATGATCAAGTAGAAAAACAAAGTGATGGTGAAATTATTACAGAAATCCCTTCAACAATTATGGTGGATACCACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAAGGGGTGGTTAGTGGTTGGAGAGAAAAGTTAGGATTTAGTAGAAAAGTGAATTGA

Coding sequence (CDS)

ATGACGGACCCACGAGCGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAAACGCTTCAAGGTCTTATGGCGGGTTCTATTGATCTCCAATTTTGCTCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATCAGCTGGAGAATGATCAAGTAGAAAAACAAAGTGATGGTGAAATTATTACAGAAATCCCTTCAACAATTATGGTGGATACCACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAAGGGGTGGTTAGTGGTTGGAGAGAAAAGTTAGGATTTAGTAGAAAAGTGAATTGA

Protein sequence

MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLENDQVEKQSDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKVN*

Homology

[Close]

BLAST of Chy2G034850 vs. ExPASy TrEMBL
Match: A0A0A0M1X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587470 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60
           MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND
Sbjct: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60

Query: 61  QVEKQSDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKVN 118
           QVEKQSD EIITEIPSTIMVDTTGIVTENVLEDQQQEP+QGVVSGWREKLGFSRKVN
Sbjct: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPDQGVVSGWREKLGFSRKVN 117

[Close]

BLAST of Chy2G034850 vs. ExPASy TrEMBL
Match: A0A1S3BR82 (uncharacterized protein LOC103492320 OS=Cucumis melo OX=3656 GN=LOC103492320 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.2e-54
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60
           MT  R PLPSSSSSTYLPPNDSLPKRFKVLWR+LLISNFALSAYMFASARKRHFN+LEND
Sbjct: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60

Query: 61  QVEKQSDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKVN 118
           QVEKQSD EIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRK+N
Sbjct: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 117

[Close]

BLAST of Chy2G034850 vs. ExPASy TrEMBL
Match: A0A6J1HYA0 (uncharacterized protein LOC111467730 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467730 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.5e-32
Identity = 82/127 (64.57%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARK--------- 60
           M DPRA L S SS   LPPND LP+RFKV+WRVLLISNFALSAYMFASARK         
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESD 60

Query: 61  ---RHFNQLENDQVEKQSDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 116
              +   QLEND +EK SD EI+ EIPST MVDTTGIVTEN+ EDQ Q+P   +V GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENIPEDQHQKPFHWIVDGWRE 120

[Close]

BLAST of Chy2G034850 vs. ExPASy TrEMBL
Match: A0A6J1EIP0 (uncharacterized protein LOC111433716 OS=Cucurbita moschata OX=3662 GN=LOC111433716 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.8e-31
Identity = 81/127 (63.78%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARK--------- 60
           M DPRA L S SS   L PND LP+RFKV+WRVLLISNFALSAYMFASARK         
Sbjct: 1   MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENN 60

Query: 61  ---RHFNQLENDQVEKQSDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 116
              +   QLEND +EK SD EI+ EIPST MVDTTGIVTEN+ EDQ Q+P   +V GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120

[Close]

BLAST of Chy2G034850 vs. ExPASy TrEMBL
Match: A0A6J1D315 (uncharacterized protein LOC111016544 OS=Momordica charantia OX=3673 GN=LOC111016544 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 7.3e-30
Identity = 71/101 (70.30%), Postives = 83/101 (82.18%), Query Frame = 0


Query: 1   MTDPRAPLPSSSS-STYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEN 60
           MTDPRAPLPSSSS    LPPND LP+RFKV+WRVLLISNFAL+AYMFA+ARK+   ++E 
Sbjct: 1   MTDPRAPLPSSSSPPPPLPPNDLLPRRFKVIWRVLLISNFALAAYMFANARKKDLGRMEK 60

Query: 61  DQVEKQSDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ 101
           D VEK SDGE++T IPST+MVDTT I  EN+ ED Q+EP Q
Sbjct: 61  DPVEKHSDGEVMTNIPSTLMVDTTAIAAENISEDHQREPFQ 101

[Close]

BLAST of Chy2G034850 vs. NCBI nr
Match: XP_004135711.1 (uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus])

HSP 1 Score: 229 bits (583), Expect = 1.89e-75
Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60
           MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND
Sbjct: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60

Query: 61  QVEKQSDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKVN 117
           QVEKQSD EIITEIPSTIMVDTTGIVTENVLEDQQQEP+QGVVSGWREKLGFSRKVN
Sbjct: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPDQGVVSGWREKLGFSRKVN 117

[Close]

BLAST of Chy2G034850 vs. NCBI nr
Match: XP_008450851.1 (PREDICTED: uncharacterized protein LOC103492320 [Cucumis melo])

HSP 1 Score: 220 bits (560), Expect = 6.09e-72
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60
           MT  R PLPSSSSSTYLPPNDSLPKRFKVLWR+LLISNFALSAYMFASARKRHFN+LEND
Sbjct: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60

Query: 61  QVEKQSDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKVN 117
           QVEKQSD EIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRK+N
Sbjct: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 117

[Close]

BLAST of Chy2G034850 vs. NCBI nr
Match: XP_023530326.1 (uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 150 bits (378), Expect = 4.44e-44
Identity = 81/127 (63.78%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60
           M DPRA L S SS   LPPND LP+RFKV+WRVLLISNFALSAYMFASARK+   Q+END
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEND 60

Query: 61  QVEKQ------------SDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 115
           + EK             SD EI+ EIPST+MVDTTGIVTEN+ EDQ Q+P   +V GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTLMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120

[Close]

BLAST of Chy2G034850 vs. NCBI nr
Match: KAG6588036.1 (hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021933.1 hypothetical protein SDJN02_15661 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149 bits (376), Expect = 8.94e-44
Identity = 81/127 (63.78%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60
           M DPRA L S SS   LPPND LP+RFKV+WRVLLISNFALSAYMFASARK+   Q+END
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEND 60

Query: 61  QVEKQ------------SDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 115
           + EK             SD EI+ EIPST MVDTTGIVTEN+ EDQ Q+P   +V GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120

[Close]

BLAST of Chy2G034850 vs. NCBI nr
Match: XP_022968528.1 (uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima])

HSP 1 Score: 148 bits (373), Expect = 2.56e-43
Identity = 82/127 (64.57%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQ---- 60
           M DPRA L S SS   LPPND LP+RFKV+WRVLLISNFALSAYMFASARK+   Q    
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESD 60

Query: 61  --------LENDQVEKQSDGEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 115
                   LEND +EK SD EI+ EIPST MVDTTGIVTEN+ EDQ Q+P   +V GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENIPEDQHQKPFHWIVDGWRE 120

The following BLAST results are available for this feature:

BLAST of Chy2G034850 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G034850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1X9	1.6e-56	98.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587470 PE=4 SV=1	[more]
A0A1S3BR82	7.2e-54	94.02	uncharacterized protein LOC103492320 OS=Cucumis melo OX=3656 GN=LOC103492320 PE=...	[more]
A0A6J1HYA0	3.5e-32	64.57	uncharacterized protein LOC111467730 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EIP0	3.8e-31	63.78	uncharacterized protein LOC111433716 OS=Cucurbita moschata OX=3662 GN=LOC1114337...	[more]
A0A6J1D315	7.3e-30	70.30	uncharacterized protein LOC111016544 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of Chy2G034850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135711.1	1.89e-75	98.29	uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus]	[more]
XP_008450851.1	6.09e-72	94.02	PREDICTED: uncharacterized protein LOC103492320 [Cucumis melo]	[more]
XP_023530326.1	4.44e-44	63.78	uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]	[more]
KAG6588036.1	8.94e-44	63.78	hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022968528.1	2.56e-43	64.57	uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]	[more]

BLAST of Chy2G034850 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G034850.1	Chy2G034850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane