Chy2G034260 (gene) Cucumber (hystrix) v1

Overview
NameChy2G034260
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 8307450 .. 8309775 (-)
RNA-Seq ExpressionChy2G034260
SyntenyChy2G034260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATAGGTTTCCTTTCGCTTTGGTTCATGGAAGGTTTCGGGTTAGACCCGAAAATTACTTTAACATTAATTATAGTCGGCGTCGGCGCATTTTTTATTTTTACTCTAATTTTCATTTAGTCCCTAATTTATACAATCTTCCAATTGTTATCCTATAATTTTGTTTACATTTCTAAACACACCTATTAATTGACATTTATATTCGAAGATTCATATCTCATCAAATAAGAAACAAAAGATTCATCTATAAATGTTTCTATATTTAGCGTTAAAATAATCGTAAGTCAAGTTAACACATGCAACACTGAATGTTATCATGTTAATAGATTCTCATTGTCTTTGCGTTCCATATGTCATGTTGATACTTCTCATTCCTTAATGTCCTTGTAGAAAAATGGAAAGTATTTAGTCGGTTTGGTGATGAATGACGCAATGTAAGTCGAGTTGAAGTTGATTGTAATTTTGATAGTTTTCAACTTGAATCAACCAACGTCACATTGTCATATCAACTGATTTGTATGCATTTAAACCGTTAAATAAATTAACTGAGAATTTTTGTTGGTATTCATAACTAGAACTCGATATGATATGAGAATTGCAAATGATTTAGTGACAAATAAAAAACTCTAAGAAGTCATTTCAAAATCTCCAAAAATTTCTATGGAAAATAAAAAAGAAGGGAGGAATTTACATATTTGGTCGTTAGATTAATGTATTAAATTAGTTCCTAAAGCTTCACACTTGAACAATTAAGTTTTCAATGTTTACAATTATTTCTTTTAGCCCCTCAACTAACAATATGTGGCATTTTTAGAAAAAGAAATTATAAAGGTAGTAATAATGAAAATGTTATTGAAAAATTGTATCTTATTATTTTAAAAAAAGGTTTTTTTAATGCTAATTTAATTAATATTAGTATTTTAAAAGAATGTCACGATAACGAACTCTGAACTATTTTAATGGATTGTGTTAGCTGTGGGATTGAAAGAGATAATCGTTTAAATGTTGAGACTTAATTGCTTAATTTTGAAATGTTGGTTATATTTCGACCCAAAACTCAAACCTATAAGCCAACATGCAAAAATTCCTTTTAGAAACCCCAATGAACTTATAAGCTAACGATTAATATAATCAATTTAGCCGTTCAAAGTTTTAGGTTTTTTGTTTCATTTTTAAAAAATATCTATTTCATATTGTTTAACAAACTAATGAGTGTTGATGTGGGAAGCCGTTTGTACTCTTATGACACTCTCCTTTAGTTCAAACACGATGTTGGAGCTAGATTATATTGCAAAAATATTCACTCTCGTTTAGAGTGGAGTCTAGTTTACTTCAACGTTTAAGTTAGTACTTTGCAATTTGCATATTTAGCTAAGCTATACATAGATAAAATGGCTTTACTCTCAGATTTTGGTTTGTGTGGGGGCTATTTATAAGACCTGTCATTTGACTTCAGTTTGGGGATATATGCAACATAGGTGATGTTTGAGTAAGTGTATCCCTTGAGGTTGTAGGGTTGTAGTGGAAAGTTCGGTTGAGTTGTTTTCCTTTTGGTCAACTAAGAACCTGATGATTCAACTTTTTCTTTTAGGACAAACTCTTATGCAGATTTTTGGGCAACCCTCGACAATAAGTAAAGTTCATTTAGGTGCTTATTTTACCAATATAAAATATTAATGTTGTAGAGATTGAATTAGGACCAAAGATCTCACAAACGATCTAAGTCAAAGATCTTAAGCTTGGTAAGAGTTCAATCATACAATCAACATCGATGTTCTCTTCCCTAAAACAAATAAGGCTTGCGTAAGAATGAATACAGCGCTATCTAACTCGACATAAACTAAACTATATTTGATAATAACTTTAAGTTCTGGAATGTGTTAAGCCAAACACCACAGTATCGTTGAGGATTCTTTTTCTGAAAATAGGTAACCTACAACGTTAATCACACATCAACAAATATCTACAACAAAAAGAAAAGTATATTTTGAAACTCGAAACGGCGTCGCTGAGCGTATCATCATCCTTCTCCATTTCTCAGTCTCTTACCTCAACCCTATCAACCCACCGTTGAATTTCATCTCGAAACTGTGCGACGGCGGACATTCGGCGATCAATTAACCGGAGATAAGGTATTAACCGCTCATTTTACAACTCTTGCATTTCAATATTTGTTTTTATTCTACAGAAATCATGGTTTTATGCTTTCAAATTAAGCTCGTAACTATGGTAAACTTCTAGAATTTTTTTCATTCAATGTCGCTGTTTCTTTAACAGAGACGGGCGTTTCTTCATACCCATGAGAGTTTATTCGGGGTCTAG

mRNA sequence

ATGGGAAATAGGTTTCCTTTCGCTTTGGTTCATGGAAGTCTCTTACCTCAACCCTATCAACCCACCGTTGAATTTCATCTCGAAACTGTGCGACGGCGGACATTCGGCGATCAATTAACCGGAGATAAGAGACGGGCGTTTCTTCATACCCATGAGAGTTTATTCGGGGTCTAG

Coding sequence (CDS)

ATGGGAAATAGGTTTCCTTTCGCTTTGGTTCATGGAAGTCTCTTACCTCAACCCTATCAACCCACCGTTGAATTTCATCTCGAAACTGTGCGACGGCGGACATTCGGCGATCAATTAACCGGAGATAAGAGACGGGCGTTTCTTCATACCCATGAGAGTTTATTCGGGGTCTAG

Protein sequence

MGNRFPFALVHGSLLPQPYQPTVEFHLETVRRRTFGDQLTGDKRRAFLHTHESLFGV*
Homology
[Close]
BLAST of Chy2G034260 vs. ExPASy TrEMBL
Match: A0A0A0LZ90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G574930 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-23
Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 1  MGNRFPFALVHGSLLPQPYQPTVEFHLETVRRRTFGDQLTGDKRRAFLHTHESLFGV 58
          MGNRFPFALV+ SLLPQPYQPTVEFHLETVRRRTFGD LTGDKRRAFLHTHESLFGV
Sbjct: 1  MGNRFPFALVNRSLLPQPYQPTVEFHLETVRRRTFGDHLTGDKRRAFLHTHESLFGV 57

[Close]
BLAST of Chy2G034260 vs. NCBI nr
Match: KGN66177.1 (hypothetical protein Csa_006887 [Cucumis sativus])

HSP 1 Score: 117 bits (294), Expect = 3.25e-33
Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 1  MGNRFPFALVHGSLLPQPYQPTVEFHLETVRRRTFGDQLTGDKRRAFLHTHESLFGV 57
          MGNRFPFALV+ SLLPQPYQPTVEFHLETVRRRTFGD LTGDKRRAFLHTHESLFGV
Sbjct: 1  MGNRFPFALVNRSLLPQPYQPTVEFHLETVRRRTFGDHLTGDKRRAFLHTHESLFGV 57

The following BLAST results are available for this feature:
BLAST of Chy2G034260 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G034260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZ901.9e-2394.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G574930 PE=4 SV=1[more]
BLAST of Chy2G034260 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66177.13.25e-3394.74hypothetical protein Csa_006887 [Cucumis sativus][more]
BLAST of Chy2G034260 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G034260.1Chy2G034260.1mRNA