Chy2G034180 (gene) Cucumber (hystrix) v1

Overview
NameChy2G034180
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRNA-dependent RNA polymerase
LocationchrH02: 8231690 .. 8246310 (+)
RNA-Seq ExpressionChy2G034180
SyntenyChy2G034180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATACCGAACAGTGTACGCGGGAGGATAAAAGGAACTGTTTTTCAGAATGGGTTTTACAGGCATGCTGATTTGCTCTTGAGGAGAAGAAATTTGCATTGTTTTGCTTCAGCTTTTGCCATGGCTGATCATTTCTTGGAAGTTTCTCTTCCGCCTTCAGTTGAGCAGTTTCTTCTTCATATATGTAAGCTACATGATCAGCCACTGCCGGATACTGAAGTGCTATGGGCCTTAGCTTCAGTGGGGGAAGTAGCTGCTCTTGATGTCCTCCATAAGATCTCCTGTAGCACTGTAAGGAACCTTAACGGTTTTATTCTGCATTTGGTTCGTAAGGATTCTTGTGCTTCTCCTCAGAAGAAGATGGTTCGTGTTTCTCCTCATCAGAGTCCTTCCTCTTGCCCTGTTTCTCAGCTTCAGAGTCCTTCAACTTGCTCTGTTTCTTTGCATCAAAGTCCTTCAACATTCTCTGTTTGTAGCGGCGAAGGTTCTTTGTTTTCCCTTTTTAGTGCCTCTGTTTTCGCTCTTCTGATATAAGCATTCTTCCTACACGTATGTTTGTTCTTAGAATCTTGCTGTTTTAGCATGATTTTATTTGTTTAGTCCCCAGATATTGGAATATTGTGCTAGTTGTTTATATTGACTACTATTTGTAGGGCTAGGAATTGCTGAGAATGCAAGCTTACAGCCGCCAACTGCAGAAAAGTCTGGAAGCTTTTCATCTTCGGTTTCGGACAGAGCAAGGATTTCGCAATTTGTGGCTTTGGGAGAACTTGAGTTTAGAAAGGCATTTTTATTATTGAGTTACATTGGAGGGTACACAATTTCTTTCAGTTATATTTGTTGTTGTGCTATTTTATATTGCTCTATGATGAAAATGATAGTTTCACCCCTTAATTCTTGTAGAGAAAGCCTTGAAAGGGTCACAACAGCAGACCAAATTCAAAGTCTAAGCCAATTAACGATGGAAAAATTTGAGGACGAAGTTTGGAAAATATTTGGTAAAAAATATGTTACAAATGAAGAACGACGAGTGGTAAATTTGATTATCATTTCTAATTGCTGTATGATTATTTTCTTTTATGCAAAAACAGCATGAGGAGATAAAAGTACAAACTGCTTTCTTTCTAAAAGAGGTGCTTCTAGCTTTCAAAACAGATATCTCGATTGGGTGCTAAATGATCAATGGACCAACTACTAAAATGAAGTCAGAAGGTTCTGGCTTTTAATTGACTGCATGGAATTCTACTTTTAAAAATCAATGTTGTGGAAGTCTAGAATGTCAGACAAATCAAAGGCCATGGTCTTGCTTTCCTTCTATCTCTAAATTTTTCAATTGGGTAAGGCATGGATCCCCCATGTCATTTTTTCCTCTGTTACCTCTTTTAAAACTTTGGAGTCCCCAGTTCTGTGGGCCTTGACCTCCCTCCTTATCGCTTTCAATTTTAAGTGTGCCTTCTGAAAGTGAAGTTTCACATCTTCGATGATCATTATTTGTCACTACTTCGATGATGGGAGTTATTGAGCTTGAGCTCATCTTTCATCGGAGAATCATAGATGCAAACCAGGCACAAATCCTCAGCCAAAAATTAGAGTCAATGATTTATAAGGTTGTAACTAACTGTTATTCAAGGCTATTTTGAATAATAAACCAGCTTCCATTTCATTAAATGAACGTATGAAAGAATGGTTGGGTCTATAAAGTAAAAAAGAAAAGCCTGAACACAACCCAGTCTGAGATGTGATTTTATTGGTAGATCACATTGTTGAAAAAGAGACCATGGCTACTTTATGGGAACCAGGTTGAACGGTATTGATTTTGTCATTATCAGAACCTAATTTTGATGAACGTTCTGTTTTGTGAATCGTTAGTTGGTTAGGCTGGAAACTTGTTTCTGCGACGCATTCTGAGGTGTGACACTTGTCTTTTTTTATCTAGTCTCTATCTCTCTCAGTCTCTCCCTCCCTATCTCGTGCAGCATGTTGATTGGGATCGTAGGAAAACACACATTTACCACTGTCATGTTGCTTTGGATGGGAGTTGCAGTTTCAAGGTCAGTGTACAAGTAAACAATCATGATAATATTGCTCATATGACACAACTACAATTTTTAAATCATTGATATCCCCCTAGATAATATTCTGAAATGATAAACTATAAATCTTCGTTTTTCTATTCAGATTTTTGCAGCACAAAGATATAATTTTTTAAGTATTGATCAGAAATTAAATTTACTGCAACATGGGCTTAAGTTTCTGAGTTCAGTAGGTATACAACATGGTATCGGAACAGGTCTTGTATTCAAACATCTGTTTCCTCCCTAATTGATTGTTTTATAACTATTTGTTGGATCTCATGTAAACTTTTAAGCCCACAAGTAATGGGTTTTATAGTATTGTTAAAAGATTAAATTTACCATCAAGTTAAGCATTGGTCTTTGGTTCAATGGTGATCTTACAATGCAGACAACAACAATATGTGGATAAAAATCTTGAATTGAGGGCTCTTTTGGTTTCTGCTAAAAAGCACGTAAAACTGGCAGGTTCAAGGTGCAAAGGTTGAACTTTGTCATGGGAATAATTGTATTTGTATATATTGGAAAGAAATATTTTAGAAAAGTAGTACCTCACAAAAGATAATCAAGAATCTCTCTGAGTGCATTTATCCAACTTTTAGTAAACTTTCTCTCTCTTTAGAATTTCCTCCATGCTTGCTTGATTACTAATTTTTGAGCCCACAAGAAGTACAGGACTTGCATGTGAGATTAATTGTGAAGGTAAAAGAGGAGGTTGGGATTCTTTTCTATTTACTGTTATCTTGCATGTCAAACCTTTACCTGAAGTTGGCCCAGGTGACTACTTGGCAGATCCGCTCTCACCAAGATGAGTGATTACTGACCTCCAAAATCTCACATGTTAGCCTATGCTACCAAATTCTAGATTAGTTAGGAAGAAATAAGAATAACGTTGACGTAGTTTCACTACTATCAACGTAGTTATGGGTACATTGACTATATGAAGAAGTCGGGAAGAAGTAATCATAAAACTAATGCCATGCCACATCTCTGGATTCTTAACTTTTGGTAGATAACCCCAAGTCTTATATGTCTAAAGACGAAGGTGAGGTGTGCATACTAGATATTATACAGACTAAATATGTAGAGCAACATCATGTATATGTCTAAATAGTCGGAGGGTTTTTCTGCTGGTAAAACTCCTCTTTTTTTATTCCCTTCAATCTTCACCTCTTGTATAAGATCTTCACTATAGTTGTGGGTACATAAGTCGAAGTAATTTTAAAACTATCAATGCTATGCACATCTCCGAATTCATAACTTTTGGTTGATAACCCCAAATGTTATATGTCTAAAGAGGGAGGTGTGTTGTGTATACTAGTCATTAGATAGACTAGATGTATATAGAACAACCATATATATGTTTAAATAGTCGGAGGGTACTTGTTTTTTGCTGATAAAAACACCTCTTTTTTTTATTCCCTTTTTTCTTCACCTCTTTGTATAAGGTAATAGCAGTGGGTACGACATTGACAGTTTGAGAACTCTCAAGTTGAAGTAACTATGAAAATTGTTTGTATTGTAGAGAACCAAATAGTTGGTGTTGGGAGGTGTGTTACTAGAAATAATAGACAAATTAACCATCATGGGTTGGCCTAGTAGTTAGAAGGAGACTGACGGGAGGTGTGTTTACTAGAAATAATATATACAAGTTAACTATAATGGGTTGGCCTAGTAGTTAAAGGGAGATAGTCTCAATAAAATGGCCAAGAGGTTTGGTCAACTACTTAGGAATTAATTTCCTATGAGTATCCTACTGATCAGGGTGTTTTGGGGGTGTCAACCTAGTTGAGATATCCGGGTGCACCTACTGATACTCTTTCTCTTCCCCATTTCTTGGCTTCCCTATTATTCTCATTGTATAGCTCTCTTGGACTTTGAGTTTATTAATAATAAAGAAGCCTGTCTCCTTGTAAAAAAAAAAAACAAAAAAAATTTCCTATGAGTGTCTTTGAGACCAAAATGTTGGAAGGTTAGGTAAGTTGTTTTGTGAGATTAGTCGTGATGTGTGTAAGCTGGCAAGACACTCATAGATATCCAAATATATATATATATATATAGATAGATAAATTATATAGAGCTACATCATAAATATGTCTAAAAAAAGGGTTTCATGTAGGGTAATTATGAAGTTCGATATCATTCCTTTGGCATGTAGTACATCTTCTTTCTTTACTAAGCTTAGCTTTAACTTAACTGGCATGGAGTTTTAGCAGACACTAAATGATGCTAATCTTTCTTCTATAAAATTGTTCTTTTATCTTCCTCTTTTCTCCTTTAGCATTGCTGATTGAGATGGATGGACTATATTGAAATAGATAGCCAACTTACTCAGCGCACCAAACCAAAATTCAGGAATCTTAGACATTCTCAATGTGTACAACTCTTTTTTCTCCACAGGAATGGCTTTATACCAACCCTCTATATTTATACATGCTGTATGCAACAAAAAATTATTTGCAATTGTGAGTTGAATATTATCGGCAAATTCACTGTTGTTGAAGAAGTTTTTGAGTTGCAGTTTCACTATACTTTGTCAGGGTCCCTTTTTGAACAATACAAAAACTCATCTGCAAAGGGTTTTAGGCGATGACAATGTTTTGATGGTCAAGTTTGCTGAAGACAAATCTGATACACCTTTGTCAAACCATTCTGGTGGTTCCTTTTATGCTTATAGCAAGATTGCTAGAGATGGCATTCTTCTTGGATTGCGTCGATACCGTTTTTTTGGTAAGTCTTTTTGATGCTTACAAACGAATTCCTTTGTTGTGCTTTTTTCTACACTCACCATTAAAAGTAAAGAGGCATTCCAGAAAACTTTTTTCAAATTATCATTGTTTGTTGCATCATGCATTGCAGCTTTCTTCCCGAATAATCAGATTGGGTTCAATGGTTAATTATATACATGAAAATCCAATGTGTATTACTAGCTAGTTAAATCTATTATCATAGACTTGGTTGTTTGTCAATATCTTTTTGTCATTGCACATGCATTAGTATTACCTACTCGTGCTCTCCCTGGCAATATACTGTTGTCCACAATTCAATACACGTGCAATGGCATCAATACATTAGTAGAATTGGCCAAGGTCTTTGAGACAAATTGCCCTTCAGCTTTTCTATCTTCGCAGCTTATGCAGTATTTTTGCTACTGTCTGCATGTCATATTCTCATCAGACAAATGATTGAGTTTGAACATTTTAACATCACTTTTTGTTGCTATTAATGACTTTATCATTTTCTTATGTTTTTGTATATGCGTATTGGGCTATTTTTTTCTTACTATATTTGTGTATATGGAATAGTTTTCAAAGATGGTGGGAAGGAGGGAAAAAAGAAGAATCCGACCACATCAGCTGTGAAGTGCTATTTTGTCCGAATGGAGTCAGATGCGTATATTGATAAGATTGAACCTTATAAATTATCAAATAGAACAGTTTTTGAAGCAAGGAGTCTTTTCATGCATGCACACATGGTGTCTAGTATAGCAAGCTACATGGCTAGGTATGCTGGCTATAGGACTTCTTATATTTTTTCTAGCAACTTGTATGTTATTGTCCTGAACGTTCTTAATTAATACTTATATTTTTATTTTGTAGGTTTTCACTCATTCTGTCGAAGACCATAAACCTGAAAATTGATTTGTCTACAGTAAATGTTCAAAGAATCGGAGATATACCCTGCAAGGTATGTTATTCTACCACTACTCCTTCTGCCTTCTGGTGGAGAGGAAGGGGTACAATTGAAAAATGTTAATCTCTCTTATACTCCATCCTTCTCATCGTTATGATTATGGACTTTTTTGCTGCGTATTCTATTTATAGCTTCTTATTTTGGTTTTTACCTTGCTGTAGGATATCTATGGCAATGTCATATATAGAGATGGAAAACCTCTTATACATACCGACGGAACAGGATTTATATCAGAGGACTTGGCTTTGGAGTGCCCTATGAATGTATTTAAAGGGCAGGCAAAGCATGATGCTGATCTTAAGGTTTGTGATTTCTTGTTAACTTATAATTAGAGAAAAAGGATAAATTTTTTTTCCAAACTTGATTTGATGTTTCAAATTTTCAACTAAATAAACCTGAAGCTAGAAATTAACAAGGACTTGTTTGGGTGGGAATCTAAAAACAAAAATTTGAAAACAAAGGATTCAAGAAAACAAAGTTGTTTTTTCATGTTTCAGGTATGTGTTTGAAAGTAGATTAAAGAGTTGGATTCTAATTTGAACAATAGTTTAGAGCGTGCTTGATTTGTTCACCAAAAATTTGTTGACAATAAACTATTTACTAATTTATTTATGAACTTTTATGTGTTTAAAAAATAGTACAATTATTACTTTATAATATTATATAATTTATAATACCAAATTTAAATTAAGAAAATGAAATAGGTTTACAACATGGCATAATGTAGTTCTTTATCATTTTTAATGTAATTTTTCTTTTAAAGTTTAAAATTTAAAATCTTGATACAAATACAATAGGAAAATTTTGAGAAATAATACATTTTTTTATTTTACATTTCAAAAATAGCACATTTTTGGAAAACTTGTAACTTTGTTTTTCTCGATCAATCTCGGTCGAACCTCGCAAACTGAGATTCTTCACAAATTTTAAAAAACTTTTTCATCATAATTTCTCGGTCCTTCTCAGCCGAGTTTGATACCGAGATTGTTTGTTTGTTTGTTTTTTTTAAATTGAAAATAAAGAGATTTATAGAACGACCAAAATACCCTTGAAAGCCCGAATGTGAGATATTCTCACAAACCATTAAACCCCAAACAGTGTGCTCATTTCGATCGAGAAGTATACAAGTTTGCTCCCAAATTCGAACAAATTTCATTGATTTTTCCTCTGCTAAACTTGAAGAACTCATAATCGAACTTCTCAAGGGGAAGTATTTTTAACAACTCCATAGTTTGGGTTTTTAGCTTATGTTTTCAGTTTTAAGTTTTTAGTTTGAAATTTGAGGCGGATGGAAAACTTTGTAGTTGGTGTTATGATATAGATGGATGTAGAACATTATTTTAAGTTAATGCACGTGGTCTCCTTCGATGAATCTCGGCGATTTCATCAATCTGAGTCGAGATCTATGAAATTTTCTTTCTTGCCCCTCCTTTTATATGTATGAAGGATTGGAGGTCTAACAGTTTAGTAATGTGCAATGCCAACCACTGAAAAAATTTCTACAAATTTACAAATTTCAACAAAGTTAAAGCTCTATGGCTCTTTTTGGAATCCCCATTGCCAAGCTTTCTTCACCACTTGAGATGATCAATATAGTTGTGGATGCATTAACTGTATGAAGAAGTTGAATTATAAAATTGTCAATGCGAATGACACTGCTGATTATTAGCGTCTTGGTTTCTTCTCTTGTTTAAGATCATCTATGTAGTCGTGGGTACACTGTATGAAGAAGTTGAAGTGATTGTAATATAATCAATGTCACAGCAGATAAAACACCTCTTGTATAAGAAGTAATCATAAAACCATCTAAGCTGTGTCACATCTCTGAATTACTAACTCATGGTAGAGCTGCCCCTAATCTTGTATGTCTAAAGAGGGAGGGTGAGGTGTGTAGATATCATTGAGACAATAAATAGAGCTACATCTCATATATTTGTCTAAAGGGGTACACTATATGTGGTGCTTTTGGGTTAGATCATCAATTTAGTAGTAGGTAGGGTACTTTGATTGAAGGAAGAGTGATCATTAAAGGGTCGCTTGGAGTACAAACTATTTTAAAAGGATAATAACCACCTTTTGCTACAGTAAATATTATTTAAAAATCTCCAATTAGCTACAGTAAACACTATTTTAAAACTTTCATTTGCTACAACTTTACTATTTTACATTCATAAAATAATCTACCCCAAACACAAACTATTGTACTCCGACTATAATAACTTAGCATTATAATAACAACTTTTTGTTCCAATACCCCCAAGACTATCAATGCCAGACTTGTATAATATCTTCAACACCATATGCATAGAGCTATACTTCATAGCTCCAAGGAGTTGTGAAGTATAGGGTGTTGTGAATTTCTGGGATCCACAGTGTAAGCAGCTGAAAGGTATAAAATTGATATTTTTTTAATAATGAGACCCACGAACTTCTTGGGTCAAACGAATTGTGGAATTTACATCCCTTTCTTCGCAACTCCTACCTCTCAATTCCTTGGGCCAAACACACTTGAAAAAATTGATTTTTAGAAAAGACACTTCCATGCTCACATAAAATCTTTTTTCCTGAAGAGTAGGAGATAATCCTTTTTGGCTAGAAGCATAGCCCAAAAGAATATTTTTCTTAGCCCAAGCTCTCGCATAATAATCTAGTTTCGACCAAAAACCACTAGAAATAGGCACATAACAATTCATATTGTTTATTTGTCCTGGGAGTTGATGTCTGTTTGTTTATTGGAATTTGTCTTTTCCTTCTACGTTGTCTTCTTTGCATAATGGTGTTTTTTCGCCTACTCACATTTTTTAATGGTTATATTTTTCCAAAGAGTAAATTCGTTTGATGTTTATATTACATGCTATATGGCAGAGAATTCCTGCTTTTGAAGGATTTCAGAATAAGACTTTGCAACTAACACTTCCAGGACTTGAATTGCGAGAACCAGTATGTGTATCTTGATTTTTTGTTTAGTTTCTATTGAATGTGTGGAGTTTATTTTTATGTGGTCACTTACCTTTATGATATTCTGTTTCTGTTGGAAGCCCTTGCTAATTCAGTTCCGACTTTTTTACAATGGCCTTGCTGTTAAGGGAACATTTCTAGTGAATAAACAGGTATAGTTTTCTAGTTCAAGAGGAGCATGAATTTTTTTGTTTTTTTTTTTTTTGACATTCATCTTGCTCATAAGTTTTGTGGTAATGATTCTACTCCATCACGATCACTTCTGGCCTCGTGAATATGATGTCTCTTTCACCTTGTATGATTATCAATTTCAGTACCCAGAAGAAGTGATCATGGTGCTTTGCATTCCAATATCATATTCACGGTTACTTTTGCACTGTTCCAGAATATCCCCATGGGGTAAAAAGTCGATTTACATGAAAATATGATCACTGGGGTTTGTAAATATGTCAGACAAATAATTGGTGTTTCCATTTAGAAAACCTACTTTGGCGCTCTATCATTATTCATTCCTAGTAATTTGGGGCAGAGAAAAGATTGCCATTCTTTTTGTTTTATCTTTATTTTTTGAGAAATTGGGGTGTCTACGTCTGCAACCTGAATGTCTATATTTAATTTTCATAAGTGTGTTGAGTTACAGCTGCAGTATTACATACAGCAGTGGAGTTATGTGCTGGTCATGCGGCTCATGGCAATCAGTTTTTGTATAGGGTTTAGTATAGCTGTTTATCAATGGGTATGGTGTTTCCTGACGTCTTCATGTTTTTTTAAAACCGTTGAATGCTGCACCATCAGTATCTTCTGTTTGGAACTCCAGTGTTTTTTAGTCTCGCAAATAAAGAGATAAAAAGGGTCTTCATGTTTCATAACGTGAAATCGGATGATTTTATTACTCTAAATTTTTTTAAACCGTTGAATGATTTTATTAGTCTAATGCAATTAGAAAACTCCCCCCCTCCTATTTGTATCAATGTGATTTTCTTATGGAATAAATGTCTCTGCTATCTTTAATTCTACTGTTTCTTGTTACTCATTGTTGGTTAACTTAAAAATTTCAGCTTCCTCCGAGGACAATTCAAATCCGCGATTCTATGATCAAAGTTGAAATAGATCCAGATCTTGAAAATTTTGAAACAGAGAATTCACTGGAGTTAGTAGGGACCAGGTATCCAACATTTTATTTTCTTTTTCCCTATTTTGCTTTTGGCATGCTATTGGAGTTAAATGCCAATTTCCTTCCAACTTGCATTATGTACATACCCAGGGAAAAATGGAATGCTCAACTCTTGTTTCTGATGAAAGTATCTTAACTTGAGGGTGTATGGAATCTTTGGTATAGTTACCAATTATAGTGTATTAATTCCTAGAGAGTTGCATTTTCTTTATATGAATTTGCATAAGGTTTCTAACTTCTGCTACCTGCAACTCTAGGGACCTGATCTTCTTATGAGAGAAGATGATAATTTTATTATTATTTTGTATTAGATGTTATAACCGTTACTGCATCTGCAGATCCATTGGAAATAGGAAATTTATGTTTGAGGATCATTAAAGGAAAAAAAAGAGAGGAATTTGATTCTGCTTGCAAAGAATTACTATTATTGTTGTCATAATTAATTATTTGATTTTATTTTCTTTAACAAAATGCTTCGTGATTTTTTATGTTGGCGCATATCAACCAATGGTGGTTTCTAGTCTCTTTATGGTCTTCTTGCAAGTTCCCCTGCAATTACTTGTATTTACCTTCAAAGAGTTTCTGTTAATGTGGCATTTTTCTTTCTCTAATCATCTGTCAGTAATCCCCCGAAGAGGACATTTCTTTCAAGAAATTTAATAGCACTGTTGAACTATGGAGGTGTCCCAAGAGAGTACTTCATGAATATCCTTGTGGATGCTTTGAAAGATGTTCAGGGTGTTTTCTCCAGTAAGCGTGCAGCTTTAAGAGGTATTAATTGTATTGAGCTGGTTTCTTTTCATCTCTTTCAAAATACTCACTTATTTATTGTTCATGCTCTCTCTCGGTCCCGGTTGATCTCTTGCAGTTTCCATTAACAATGGTGAAATGGATGACTTTCTAGTTGCAAGAATGATTTTAGCTGGCATTCCTCTTGATGAATCATATTTGCAATATCGGCTATCTGTGCTATTGAAGGAGGAGAAAAAGAGCTTGAAAAGCGGAAGACTTCACGTGCCTGAATGTTATTATTTAATGGGGACAGTCGATCCCACATTTACACTTGAAAGCGACGAAGTCTGTGTTATCCTGTATGTATTACATGCATGATATTTCAATTAGTTTTACTTAATTCCATGAAAGCATTGAGTGCAAACGTTATAATATGTTCACAATTCATCTTCATGGCTACTGGATGAGAAGAGTGGAACGAGGATAAATATACAAGTACAGGAGAAAAACTGATTGTCATGGTTTTCACGATAGTACACGTAGACCTACGTTCCACGTTCTTACGATGTTCAAAAGGTTTAAAAAATATTATTCAAGTTTATATAAATCATAATATCTTAATGCTATTCACTCATTTGACAAGCAAACATCTGATAAATAGGATAGGATGGTAAGACTCATGGTAATTTACTCGTGTTACTTAAAATCCCTGCTTTCGTTTTGTTTTTCCCCCCCTTTTTTCGCACTTGTAAATTGGTATTAACGGGTCTATTTTCTCCCTCCAATTAGTGAGAATGGACAAATCAACGGGAAGGTCCTTGTTTATCGCAATCCTGGTCTACATTTTGGTGATATCCATGTTTTAACAGCTAAATATGTGGAGAAGTTGGTACCTGTTGTTGGCAATGCGAAATATGCCATATTCTTTTCCAGTAAGGGTCCCCGTTCAGTAGGTGATGAAATAGCAGGTGGTGATTTTGACGGTGATATGTACTGGGTTTCCAGAAATTCACAGGTTATTGAACATTAAAACTTCTGGCCTCAAAGTTCTATTACCTGAATTTGGTTTCGTCAACTTACAAATGTGAACCTATTGGCTATTAGTTCAATGGTTTCATGGATGTTTTATTTATTGGGTATGTTTTGTCATATTTTCTGCACAGAGTTTGGTTAAAAACTGTTCTGCCTTCACTTATTATAGAGTGTATGTACACATTTTAGCTTGATGTTCACGCAATCAGGCAGGCCTTTTAAGCTTATGAGTTATGCTTAATTAGTTCTATGGTCTCTTTTGTCAGTATCTTTTATTCTTGGATCGATGGTTTCTGATTCTCATGTCTTAGTCCAAACTATAATTTCTGAAAAATAAATTATTTCCACATTCAATTATAATTATTGAGTCCCTGCCTAACCATATACTGATTTCTTTATTTTCTATTTCTTTTTTTGAGTTTTTTCAGTTGTTAGAGTATTTCAGACCATGTGAACCATGGAGGCCAAGTCCTTCAACGGAAGTAGTTACAAATAAAAAGCCGAAAGAATTTTCTTCCGAGGAGTTGGAGAACGAGCTATTTAAACTATTCTTGTCTACTAGGTTTCAGCCAAGGTTATGTGATGAATTGTATTTGTCCATTTTTTTGGTCCGTCAAAATTTCATTGTTATTTTTCTTTAAGCGGGTGGTGTGTTATTTCATACTTTGACTTGAGATGGAGTTTTCCAATAATTTTTCTCTGGTATGCTCAGTTATGCAAAGAGTGTTGCAGCTGATAACTGGTTGGCATTGATGGATCAGTTCCTAATGTTGGGTGAAGAGCGTAAAGAAGAAAGAAATCGTATAAGGGCAAAGATTCTGCTGTTGATCAATATATATTATGATGCTTTAGATGCACCTAAAAAAGGCAGGAAGGTCAGTTCTACCTACATAGGGTTTCCTGTCTCTTCTTTATAATATTGTTAATTGTCTGTAATACTATTTATGTTCTCCAAAGATTTCCTAGGAAACAATACTCGATTTGGAATTAGTTATTAAGCAAGTCGTTAACTAGGAGCCAAGGAGGTTCATCATGGTTGGCACTTATTTCTCGAACTACCAAACATGGAACTTGTTCAAATCTGCCTTGGTAGTCACAACTGATCTGATTTCTTTTAATAAGAAATATTCTGATTTTTATTTTTATTAGGGAAATAAGGTGATAAAAATTGGATAATGAGATTGAAATTCATAAATACAAATAGAAACACAAATGTATTACTTTTTCAAAGAAAATTATAGAAGGTTGCACATGCAGATGCTTCGTTCTCTTCCAAGACTGTGTTAGGATCCCGTATATTAGAACACAGCAAAACACCTAGATAACTAGTAGGAGGCTAGGGCACTTTTCTAACCTCCAAAAAGGGGCATAATTTAAGGTACTAGATAATAATATATTAGTATGATATTAGTAGTAAGGAGTATTAGGGTAATTAGTAGGAAGTTAGTTACTTACCTAATCTTCTTGTAAATAGGAGGGTGAGTGAGGAGGGATATGTTGAGTGGTTTAAGGCTTGGGTTCACTCAAGAGGGAGCTTCTAAGTACCTTGAACTTTATTTATCTTGTATTTCTTCGTAGTTATATTTCAATATATCCAAATCTTATTTGAATTAGGAAGAATCCTAGCACATCTCTTCAAGCATGGAACAAACACTTCCCAATCCATTGGAGAGCTTTCTTGTCATCTCTATGAAATGAGAGAAAACCATTGGTTCATCGGTTAAGAAAGTTTTTTTCCACCTGAAATGTGCCTCCCTCCCTTGTTCTACCATCCCTAGATTCAACGTTTTGTTTTATATTGGTCTATATATATATATAGCACAAGGCACATTGCTCTTTGATCCATGGCTGTTGATGTGTTTGATGATAGATTGAAGTTCCAAAACACCTAAAGGCAGGAACTTTACCTCATTTTATGGAAAGGGGAAAAAATTCATATGTTTCAACTTCAATTCTTGGACAAATTTTTGACACCGTTAACATGTATCAAGAAGAAGTGCCAAACATTGGTTAGTGCTTTAATATCATATAATTACCATGTTAAAGTTCACTTAATAACAAGGGAACAGATTCTCGATTAAGGCTCCTAATGCATCTTTACTACATTGATTCAGAGGTTCAAAAACTTCCTTGCTTTGAAGAGGAAGTGCCCGAATATATCTTCATGAAGTGGAAGTTTCTCTATGAGTTGTATAGAAAAGACATGGTGGACGCCATGCAGCTTGATCCCGATGCCAAAAACATAGCTGCTGAAGCCACAATTAAGAAGTACAAGGAGGTACTTTCATAATCCAAAGATCAGCAGTTTCTACAAACTGATTAATTGTGGTAGCTTACTGGTTAAAATACCATTTCAAAAGTTTGTTTGATTTTAGTTCCTATACTTTCGTTCTTTTCACAAATCTTAAATTTAGTTCATAAAAGTTATATTTTATCGAAATTGATTAAATAATAACAATATTTTTTAGTAAGGAAATACAATATGTAAATATATTTTCAAATTTTACGTTAAAAACACCCTAGATAACAATTTTTTTTAAAAAAAATGAACAATAAACCACCATTAGAGACTAAATTTGGACTAAAATTAAACAAACTTTAAAGTATAAGGACCGCTGAAAAAGAAAGGGTTTGGAGATATTGGAATATTATCATATCAGTAACTGAATAAAGAACATCTGTTGCTGTATCATGATTGTTCTTTATTTCTGGGGATATAGATATTGTATGGTGCGGAAGAACTCGAGGGGAGTCCGAGGTCGAATGAGGATGTTTACCAGGAGGCTCTTGCAATTTATCAAGTTACATATGACCATGCCATGAGCCGCAGTGTGCGCAATTGTGGCTTTGCATGGAAAGTTGCAGGTTCGGCTCTCTTCAATCTCTATGCTATAAAACATTCTGAAAGAAGCTTTCTTCATTGTCTTCCTTCAGTTATGCGTGAGATTTTTAGTTAG

mRNA sequence

ATGAACATACCGAACAGTGTACGCGGGAGGATAAAAGGAACTGTTTTTCAGAATGGGTTTTACAGGCATGCTGATTTGCTCTTGAGGAGAAGAAATTTGCATTGTTTTGCTTCAGCTTTTGCCATGGCTGATCATTTCTTGGAAGTTTCTCTTCCGCCTTCAGTTGAGCAGTTTCTTCTTCATATATGTAAGCTACATGATCAGCCACTGCCGGATACTGAAGTGCTATGGGCCTTAGCTTCAGTGGGGGAAGTAGCTGCTCTTGATGTCCTCCATAAGATCTCCTGTAGCACTGTAAGGAACCTTAACGGTTTTATTCTGCATTTGGTTCGTAAGGATTCTTGTGCTTCTCCTCAGAAGAAGATGGTTCGTGTTTCTCCTCATCAGAGTCCTTCCTCTTGCCCTGTTTCTCAGCTTCAGAGTCCTTCAACTTGCTCTGTTTCTTTGCATCAAAGTCCTTCAACATTCTCTGTTTGTAGCGGCGAAGGGCTAGGAATTGCTGAGAATGCAAGCTTACAGCCGCCAACTGCAGAAAAGTCTGGAAGCTTTTCATCTTCGGTTTCGGACAGAGCAAGGATTTCGCAATTTGTGGCTTTGGGAGAACTTGAGTTTAGAAAGGCATTTTTATTATTGAGTTACATTGGAGGAGAAAGCCTTGAAAGGGTCACAACAGCAGACCAAATTCAAAGTCTAAGCCAATTAACGATGGAAAAATTTGAGGACGAAGTTTGGAAAATATTTGGTAAAAAATATGTTACAAATGAAGAACGACGAGTGCATGTTGATTGGGATCGTAGGAAAACACACATTTACCACTGTCATGTTGCTTTGGATGGGAGTTGCAGTTTCAAGGGTCCCTTTTTGAACAATACAAAAACTCATCTGCAAAGGGTTTTAGGCGATGACAATGTTTTGATGGTCAAGTTTGCTGAAGACAAATCTGATACACCTTTGTCAAACCATTCTGGTGGTTCCTTTTATGCTTATAGCAAGATTGCTAGAGATGGCATTCTTCTTGGATTGCGTCGATACCGTTTTTTTGTTTTCAAAGATGGTGGGAAGGAGGGAAAAAAGAAGAATCCGACCACATCAGCTGTGAAGTGCTATTTTGTCCGAATGGAGTCAGATGCGTATATTGATAAGATTGAACCTTATAAATTATCAAATAGAACAGTTTTTGAAGCAAGGAGTCTTTTCATGCATGCACACATGGTGTCTAGTATAGCAAGCTACATGGCTAGGTTTTCACTCATTCTGTCGAAGACCATAAACCTGAAAATTGATTTGTCTACAGTAAATGTTCAAAGAATCGGAGATATACCCTGCAAGGATATCTATGGCAATGTCATATATAGAGATGGAAAACCTCTTATACATACCGACGGAACAGGATTTATATCAGAGGACTTGGCTTTGGAGTGCCCTATGAATGTATTTAAAGGGCAGGCAAAGCATGATGCTGATCTTAAGAGAATTCCTGCTTTTGAAGGATTTCAGAATAAGACTTTGCAACTAACACTTCCAGGACTTGAATTGCGAGAACCACCCTTGCTAATTCAGTTCCGACTTTTTTACAATGGCCTTGCTGTTAAGGGAACATTTCTAGTGAATAAACAGCTTCCTCCGAGGACAATTCAAATCCGCGATTCTATGATCAAAGTTGAAATAGATCCAGATCTTGAAAATTTTGAAACAGAGAATTCACTGGAGTTAGTAGGGACCAGTAATCCCCCGAAGAGGACATTTCTTTCAAGAAATTTAATAGCACTGTTGAACTATGGAGGTGTCCCAAGAGAGTACTTCATGAATATCCTTGTGGATGCTTTGAAAGATGTTCAGGGTGTTTTCTCCAGTAAGCGTGCAGCTTTAAGAGTTTCCATTAACAATGGTGAAATGGATGACTTTCTAGTTGCAAGAATGATTTTAGCTGGCATTCCTCTTGATGAATCATATTTGCAATATCGGCTATCTGTGCTATTGAAGGAGGAGAAAAAGAGCTTGAAAAGCGGAAGACTTCACGTGCCTGAATGTTATTATTTAATGGGGACAGTCGATCCCACATTTACACTTGAAAGCGACGAAGTCTGTGTTATCCTTGAGAATGGACAAATCAACGGGAAGGTCCTTGTTTATCGCAATCCTGGTCTACATTTTGGTGATATCCATGTTTTAACAGCTAAATATGTGGAGAAGTTGGTACCTGTTGTTGGCAATGCGAAATATGCCATATTCTTTTCCAGTAAGGGTCCCCGTTCAGTAGGTGATGAAATAGCAGGTGGTGATTTTGACGGTGATATGTACTGGGTTTCCAGAAATTCACAGTTGTTAGAGTATTTCAGACCATGTGAACCATGGAGGCCAAGTCCTTCAACGGAAGTAGTTACAAATAAAAAGCCGAAAGAATTTTCTTCCGAGGAGTTGGAGAACGAGCTATTTAAACTATTCTTGTCTACTAGGTTTCAGCCAAGTTATGCAAAGAGTGTTGCAGCTGATAACTGGTTGGCATTGATGGATCAGTTCCTAATGTTGGGTGAAGAGCGTAAAGAAGAAAGAAATCGTATAAGGGCAAAGATTCTGCTGTTGATCAATATATATTATGATGCTTTAGATGCACCTAAAAAAGGCAGGAAGATTGAAGTTCCAAAACACCTAAAGGCAGGAACTTTACCTCATTTTATGGAAAGGGGAAAAAATTCATATGTTTCAACTTCAATTCTTGGACAAATTTTTGACACCGTTAACATGTATCAAGAAGAAGTGCCAAACATTGAGGTTCAAAAACTTCCTTGCTTTGAAGAGGAAGTGCCCGAATATATCTTCATGAAGTGGAAGTTTCTCTATGAGTTGTATAGAAAAGACATGGTGGACGCCATGCAGCTTGATCCCGATGCCAAAAACATAGCTGCTGAAGCCACAATTAAGAAGTACAAGGAGATATTGTATGGTGCGGAAGAACTCGAGGGGAGTCCGAGGTCGAATGAGGATGTTTACCAGGAGGCTCTTGCAATTTATCAAGTTACATATGACCATGCCATGAGCCGCAGTGTGCGCAATTGTGGCTTTGCATGGAAAGTTGCAGGTTCGGCTCTCTTCAATCTCTATGCTATAAAACATTCTGAAAGAAGCTTTCTTCATTGTCTTCCTTCAGTTATGCGTGAGATTTTTAGTTAG

Coding sequence (CDS)

ATGAACATACCGAACAGTGTACGCGGGAGGATAAAAGGAACTGTTTTTCAGAATGGGTTTTACAGGCATGCTGATTTGCTCTTGAGGAGAAGAAATTTGCATTGTTTTGCTTCAGCTTTTGCCATGGCTGATCATTTCTTGGAAGTTTCTCTTCCGCCTTCAGTTGAGCAGTTTCTTCTTCATATATGTAAGCTACATGATCAGCCACTGCCGGATACTGAAGTGCTATGGGCCTTAGCTTCAGTGGGGGAAGTAGCTGCTCTTGATGTCCTCCATAAGATCTCCTGTAGCACTGTAAGGAACCTTAACGGTTTTATTCTGCATTTGGTTCGTAAGGATTCTTGTGCTTCTCCTCAGAAGAAGATGGTTCGTGTTTCTCCTCATCAGAGTCCTTCCTCTTGCCCTGTTTCTCAGCTTCAGAGTCCTTCAACTTGCTCTGTTTCTTTGCATCAAAGTCCTTCAACATTCTCTGTTTGTAGCGGCGAAGGGCTAGGAATTGCTGAGAATGCAAGCTTACAGCCGCCAACTGCAGAAAAGTCTGGAAGCTTTTCATCTTCGGTTTCGGACAGAGCAAGGATTTCGCAATTTGTGGCTTTGGGAGAACTTGAGTTTAGAAAGGCATTTTTATTATTGAGTTACATTGGAGGAGAAAGCCTTGAAAGGGTCACAACAGCAGACCAAATTCAAAGTCTAAGCCAATTAACGATGGAAAAATTTGAGGACGAAGTTTGGAAAATATTTGGTAAAAAATATGTTACAAATGAAGAACGACGAGTGCATGTTGATTGGGATCGTAGGAAAACACACATTTACCACTGTCATGTTGCTTTGGATGGGAGTTGCAGTTTCAAGGGTCCCTTTTTGAACAATACAAAAACTCATCTGCAAAGGGTTTTAGGCGATGACAATGTTTTGATGGTCAAGTTTGCTGAAGACAAATCTGATACACCTTTGTCAAACCATTCTGGTGGTTCCTTTTATGCTTATAGCAAGATTGCTAGAGATGGCATTCTTCTTGGATTGCGTCGATACCGTTTTTTTGTTTTCAAAGATGGTGGGAAGGAGGGAAAAAAGAAGAATCCGACCACATCAGCTGTGAAGTGCTATTTTGTCCGAATGGAGTCAGATGCGTATATTGATAAGATTGAACCTTATAAATTATCAAATAGAACAGTTTTTGAAGCAAGGAGTCTTTTCATGCATGCACACATGGTGTCTAGTATAGCAAGCTACATGGCTAGGTTTTCACTCATTCTGTCGAAGACCATAAACCTGAAAATTGATTTGTCTACAGTAAATGTTCAAAGAATCGGAGATATACCCTGCAAGGATATCTATGGCAATGTCATATATAGAGATGGAAAACCTCTTATACATACCGACGGAACAGGATTTATATCAGAGGACTTGGCTTTGGAGTGCCCTATGAATGTATTTAAAGGGCAGGCAAAGCATGATGCTGATCTTAAGAGAATTCCTGCTTTTGAAGGATTTCAGAATAAGACTTTGCAACTAACACTTCCAGGACTTGAATTGCGAGAACCACCCTTGCTAATTCAGTTCCGACTTTTTTACAATGGCCTTGCTGTTAAGGGAACATTTCTAGTGAATAAACAGCTTCCTCCGAGGACAATTCAAATCCGCGATTCTATGATCAAAGTTGAAATAGATCCAGATCTTGAAAATTTTGAAACAGAGAATTCACTGGAGTTAGTAGGGACCAGTAATCCCCCGAAGAGGACATTTCTTTCAAGAAATTTAATAGCACTGTTGAACTATGGAGGTGTCCCAAGAGAGTACTTCATGAATATCCTTGTGGATGCTTTGAAAGATGTTCAGGGTGTTTTCTCCAGTAAGCGTGCAGCTTTAAGAGTTTCCATTAACAATGGTGAAATGGATGACTTTCTAGTTGCAAGAATGATTTTAGCTGGCATTCCTCTTGATGAATCATATTTGCAATATCGGCTATCTGTGCTATTGAAGGAGGAGAAAAAGAGCTTGAAAAGCGGAAGACTTCACGTGCCTGAATGTTATTATTTAATGGGGACAGTCGATCCCACATTTACACTTGAAAGCGACGAAGTCTGTGTTATCCTTGAGAATGGACAAATCAACGGGAAGGTCCTTGTTTATCGCAATCCTGGTCTACATTTTGGTGATATCCATGTTTTAACAGCTAAATATGTGGAGAAGTTGGTACCTGTTGTTGGCAATGCGAAATATGCCATATTCTTTTCCAGTAAGGGTCCCCGTTCAGTAGGTGATGAAATAGCAGGTGGTGATTTTGACGGTGATATGTACTGGGTTTCCAGAAATTCACAGTTGTTAGAGTATTTCAGACCATGTGAACCATGGAGGCCAAGTCCTTCAACGGAAGTAGTTACAAATAAAAAGCCGAAAGAATTTTCTTCCGAGGAGTTGGAGAACGAGCTATTTAAACTATTCTTGTCTACTAGGTTTCAGCCAAGTTATGCAAAGAGTGTTGCAGCTGATAACTGGTTGGCATTGATGGATCAGTTCCTAATGTTGGGTGAAGAGCGTAAAGAAGAAAGAAATCGTATAAGGGCAAAGATTCTGCTGTTGATCAATATATATTATGATGCTTTAGATGCACCTAAAAAAGGCAGGAAGATTGAAGTTCCAAAACACCTAAAGGCAGGAACTTTACCTCATTTTATGGAAAGGGGAAAAAATTCATATGTTTCAACTTCAATTCTTGGACAAATTTTTGACACCGTTAACATGTATCAAGAAGAAGTGCCAAACATTGAGGTTCAAAAACTTCCTTGCTTTGAAGAGGAAGTGCCCGAATATATCTTCATGAAGTGGAAGTTTCTCTATGAGTTGTATAGAAAAGACATGGTGGACGCCATGCAGCTTGATCCCGATGCCAAAAACATAGCTGCTGAAGCCACAATTAAGAAGTACAAGGAGATATTGTATGGTGCGGAAGAACTCGAGGGGAGTCCGAGGTCGAATGAGGATGTTTACCAGGAGGCTCTTGCAATTTATCAAGTTACATATGACCATGCCATGAGCCGCAGTGTGCGCAATTGTGGCTTTGCATGGAAAGTTGCAGGTTCGGCTCTCTTCAATCTCTATGCTATAAAACATTCTGAAAGAAGCTTTCTTCATTGTCTTCCTTCAGTTATGCGTGAGATTTTTAGTTAG

Protein sequence

MNIPNSVRGRIKGTVFQNGFYRHADLLLRRRNLHCFASAFAMADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCSTVRNLNGFILHLVRKDSCASPQKKMVRVSPHQSPSSCPVSQLQSPSTCSVSLHQSPSTFSVCSGEGLGIAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGSCSFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYRFFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKGRKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQEALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFNLYAIKHSERSFLHCLPSVMREIFS*
Homology
[Close]
BLAST of Chy2G034180 vs. ExPASy Swiss-Prot
Match: O82188 (Probable RNA-dependent RNA polymerase 5 OS=Arabidopsis thaliana OX=3702 GN=RDR5 PE=2 SV=2)

HSP 1 Score: 887.9 bits (2293), Expect = 1.1e-256
Identity = 457/874 (52.29%), Postives = 611/874 (69.91%), Query Frame = 0 

Query: 193  ISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFEDEVWKIFGKKYV 252
            I Q VALGELEF+K FLLLSYI G+ + +V TAD+I+    L M ++E  VW   G+ Y 
Sbjct: 128  IPQLVALGELEFKKVFLLLSYIPGQHVGQVITADEIRLWKDLPMVEYEAAVWDRLGRHYC 187

Query: 253  TNEERRVHVDWDRRKTHIYHCHVALDGSCSFK------GPFLNNTKTHLQRVLGDDNVLM 312
              ++RR+ + WD  KTH Y C+VA +GS +FK      GP L +T THL +VLGDDNVL 
Sbjct: 188  PQKDRRM-LQWDSGKTHYYQCNVAPNGSYTFKVLSALQGPLLEHTGTHLHKVLGDDNVLT 247

Query: 313  VKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYRFFVFKDGGKEGKKKNPTTSAV 372
            VKFA+ +  +  S +S   ++ Y  IA++GI++GLRRY+FFVFKDGGKE KKK+ +T  V
Sbjct: 248  VKFADVQKSS--STYSIDHYFTYKGIAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKV 307

Query: 373  KCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLK 432
            KCYF+R +S A+ D   PY L+ ++++EAR  FMH H   ++A+YMARFSLILSKT  L+
Sbjct: 308  KCYFIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLE 367

Query: 433  IDLSTVNVQRIGDIPCKDIYG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKH 492
            +D++ +   +I DI C D  G +V+ ++ KP IH+DGTG+ISEDLA  CP+N+FKG+   
Sbjct: 368  VDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLR 427

Query: 493  DADLKRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLVNKQLPPRTI 552
                      E  Q    Q         +PPLLIQFR+FY+G AVKGTFL+NK+L PRT+
Sbjct: 428  S---------ESIQEACYQ---------DPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTV 487

Query: 553  QIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMNIL 612
            Q+R SMIKV  DP L NF T N+LE+V TSNPPKRT LS+NL+ALL+YGG+P E+F++IL
Sbjct: 488  QVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDIL 547

Query: 613  VDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKK 672
            ++ L++ + +F +KRAAL  ++N GEMDD   A+MIL GIPLDE +L+  LS+LLK EK 
Sbjct: 548  LNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVGIPLDEPHLKNYLSILLKTEKN 607

Query: 673  SLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLT 732
             LK+G+L V E YYLMGTVDPT  L+ DEVCVILE+GQI+G+VLVYRNPGLHFGDIH+L 
Sbjct: 608  DLKAGKLPVTESYYLMGTVDPTGALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILK 667

Query: 733  AKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFDGDMYWVSRNSQLLEYFRPCEPW 792
            A YV+ L   VGN+K+A+FF  KGPRS+GDEIAGGDFDGDMY++SRN +LLE F+P EPW
Sbjct: 668  ATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPW 727

Query: 793  -RPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLG 852
               +P ++  + + P + S EELE ELF++FL+  F  S    +AAD+WL +MD+FL+LG
Sbjct: 728  VSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILG 787

Query: 853  EERKEERNRIRAKILLLINIYYDALDAPKKGRKIEVPKHLKAGTLPHFMERGKNSYVSTS 912
            ++R EE+  ++ K+L LI+IYYDALDAPKKG K+ +P  LK    PH+MER K  + STS
Sbjct: 788  DDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDK-KFQSTS 847

Query: 913  ILGQIFDTVNMY--QEEVPNIEVQKLPCFEEE-VPEYIFMKWKFLYELYRKDMVDAMQLD 972
            ILG IFD V     +E  P+ E+ KLPCFE+E V E+   K +  Y+ YR +M  AM+ D
Sbjct: 848  ILGLIFDFVKSQTTEEPSPSSEISKLPCFEDEPVSEFHMQKCRLWYDNYRTEMTQAMKTD 907

Query: 973  PDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQEALAIYQVTYDHAMSRSVRNCGF 1032
             D    +A   I++YK+  YGA   E S +S E++Y +ALA+Y++ YD+A+   V  C F
Sbjct: 908  KDE---SANEVIQRYKQEFYGAAGFEDSKKSLEELYPQALALYKIVYDYAIHAGVSKCRF 967

Query: 1033 AWKVAGSALFNLYAIKHSERSFLHCLPSVMREIF 1056
             WKVAG  L   Y  K  +   L C PSV++E++
Sbjct: 968  VWKVAGPVLCRFYLNKKMQEKCLVCAPSVLKELW 976

[Close]
BLAST of Chy2G034180 vs. ExPASy Swiss-Prot
Match: O82190 (Probable RNA-dependent RNA polymerase 3 OS=Arabidopsis thaliana OX=3702 GN=RDR3 PE=3 SV=2)

HSP 1 Score: 868.2 bits (2242), Expect = 9.4e-251
Identity = 492/1004 (49.00%), Postives = 644/1004 (64.14%), Query Frame = 0 

Query: 48   EVSLPPSVEQFLLHICKLHDQPLP-DTEVLWALASVGEVAALDVLHKI-SCSTVRNLNGF 107
            E++L  SVE  L  I + H+  LP   E    L+S+ E  AL+ L K+ +   ++ L+G 
Sbjct: 14   EIALLGSVETMLEKIYEKHNHRLPISVETRRKLSSISEELALETLRKVFNKPYLKTLDGL 73

Query: 108  ILHLVRKDSCASPQKKMVRVSPHQSPSSCPVSQLQSPSTCSVSLHQSPSTFSVCSGEGLG 167
            I++ V+           V  SP  SP   PV   ++P+  S    Q  S         L 
Sbjct: 74   IMYFVK-------GTVTVDGSPRLSPGESPVQSPRTPAKKSCRASQDVS---------LD 133

Query: 168  IAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL-ERVTT 227
            +   +       E  GS          I   +ALGELEF+KAFLLLSYIGGESL E V +
Sbjct: 134  LETPSPKFMKREENGGS--------KYIPPLLALGELEFKKAFLLLSYIGGESLVEEVIS 193

Query: 228  ADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGSCSFK 287
             DQI+    L M  +E  VW   G++Y + +ERR  ++ D   TH Y CHVA DGS  FK
Sbjct: 194  GDQIRKWKDLPMVSYEAAVWNRLGQRYCSPKERRRPLEGDSGMTHYYQCHVATDGSYKFK 253

Query: 288  GPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRY 347
            G  L NT THL +VLGDDNVL VKF  DK    +  +    +  Y  IA++GI++GLRRY
Sbjct: 254  GHLLENTGTHLHKVLGDDNVLTVKF--DKV-LGVETYCNDLYSTYKGIAKNGIMVGLRRY 313

Query: 348  RFFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHM 407
            RFFVFKDGGKE KKK+ +T  VKCYF+R +S A ID   PY  + +++ EAR  FMH + 
Sbjct: 314  RFFVFKDGGKEEKKKDVSTKGVKCYFIRTDSTASIDMQNPYIFAGKSMHEARMHFMHVNT 373

Query: 408  VSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYG-NVIYRDGKPLIHTDGT 467
            +SS+ +YM+RFSLILSKT  L++D++ +  ++I DI C D    +V+ ++GKP IH+DGT
Sbjct: 374  LSSLPNYMSRFSLILSKTKTLEVDMTGITFEQIDDIHCHDQDDKDVLDKNGKPCIHSDGT 433

Query: 468  GFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRL 527
            G+ISEDLA  CP+N+FKG++    ++         Q+K L     G   +EPPLLIQFR+
Sbjct: 434  GYISEDLARMCPVNIFKGKSMRSNNI---------QSKNLNFEGQGPCGQEPPLLIQFRI 493

Query: 528  FYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFL 587
            FYNG AVKGTFL NK+LPPRT+Q+R SMIKV  D  L N  T NSLE+V TSNPP++  L
Sbjct: 494  FYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARL 553

Query: 588  SRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILA 647
            SRNL+ALL+YGGVP ++F+NIL + L++ + +F S+RAA + +IN G  DD   A MIL 
Sbjct: 554  SRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG--DDQYTADMILV 613

Query: 648  GIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILENGQ 707
            GIPLDE YL+ RLS LLK E+ +LK+GR  + E YY+MGTVDPT  L+ +E+CVIL +GQ
Sbjct: 614  GIPLDEPYLKDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENEICVILHSGQ 673

Query: 708  INGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFD 767
            I+G VLVYRNPGLHFGDIHVL A YV+ L   VGNAK+A+FF  KGPRS+GDEIAGGDFD
Sbjct: 674  ISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFD 733

Query: 768  GDMYWVSRNSQLLEYFRPCEPW-RPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQP 827
            GDMY++SRN +LLE+F+P EPW   S  +++   +KP E S EELE ELFK+FL  RF  
Sbjct: 734  GDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKPSELSEEELEEELFKMFLKARFCK 793

Query: 828  SYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKGRKIEVPK 887
                 +AAD WL +MD FL LG+E  +E+   +  IL LI+IYYDALDAPKKG K+++P 
Sbjct: 794  RDVIGMAADCWLGIMDPFLTLGDESAKEKYERKKNILKLIDIYYDALDAPKKGAKVDLPP 853

Query: 888  HLKAGTLPHFMERG-KNSYVSTSILGQIFDTVNMYQ-EEVPNIEVQKLPCFEEE-VPEYI 947
             L+    PH+MER  K  + STSILG IFDTV+ +  EE P  E+ KL  FE+E VP+  
Sbjct: 854  DLEIKNFPHYMERDPKRDFRSTSILGLIFDTVDSHNAEEPPPSEISKLWYFEDEPVPKSH 913

Query: 948  FMKWKFLYELYRKDMVDA-MQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQ 1007
              K+   YE YR +M  A M+ D   +N      I++YK+  YGA   E S +S E++Y 
Sbjct: 914  MDKFTSWYENYRSEMSQAMMETDKVKRNQLTNEVIQRYKQDFYGAAGFEDSNKSLEELYP 973

Query: 1008 EALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFNLYAIKHSERS 1043
            +ALA+Y V YD+A+   V  C FAW VAG  L   Y  K  ++S
Sbjct: 974  QALALYNVVYDYAIQEGVAKCTFAWNVAGPVLCKFYLKKTKDKS 979

[Close]
BLAST of Chy2G034180 vs. ExPASy Swiss-Prot
Match: O82189 (Probable RNA-dependent RNA polymerase 4 OS=Arabidopsis thaliana OX=3702 GN=RDR4 PE=3 SV=2)

HSP 1 Score: 784.6 bits (2025), Expect = 1.4e-225
Identity = 445/966 (46.07%), Postives = 609/966 (63.04%), Query Frame = 0 

Query: 48   EVSLPPSVEQFLLHICKLHDQPLP-DTEVLWALASVGEVAALDVLHKI-SCSTVRNLNGF 107
            E++L  SVE  L  +   H+   P   E    L+S+ E  AL+ L K+ +   V+ L+G 
Sbjct: 19   EIALLGSVETMLEKVYGKHNHHPPIKVETRRRLSSISEELALETLRKVLNMPNVKTLDGI 78

Query: 108  ILHLVRKDSCASPQKKMVRVSPHQSPSSCPVSQLQSPSTCSVSLHQSPSTFSVCSGEGLG 167
            I++ +            V  SP       PV   ++P   S    Q+  +          
Sbjct: 79   IIYFLN-------DAVTVDGSPRLWSGESPVQFPRTPGKKSCRASQAEVSLD-------- 138

Query: 168  IAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTA 227
              E+ S +    +++G       +   IS  +ALGELEF+KAFLLL+Y+GG+SL  V + 
Sbjct: 139  -REDPSPKFLRGDENG-------ESKHISLLLALGELEFKKAFLLLTYLGGKSLGEVISG 198

Query: 228  DQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGSCSFKG 287
            D+I+    L M  +E  VW   G+      E R+ ++ D  KTH Y CHVA DGS   KG
Sbjct: 199  DEIRQWKDLPMVAYERAVWFKLGQ-----NEERMQLESDSGKTHYYQCHVAPDGSYRLKG 258

Query: 288  PFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYR 347
             FL NT THL +VLGDDNVL V+F +   +   S +    +  Y +IA++GI++GLRRY+
Sbjct: 259  YFLENTGTHLHKVLGDDNVLTVRFDQLPKE---STYCDNPYSKYKEIAKNGIMVGLRRYQ 318

Query: 348  FFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMV 407
            FFVFKDGGK  KKK  +T  VKCYF+R  S A  D   PY LS  ++ EAR  FMH H +
Sbjct: 319  FFVFKDGGKAEKKKRNSTKQVKCYFIRTGSTASSDMENPYILSGMSIHEARMHFMHVHTL 378

Query: 408  SSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGN-VIYRDGKPLIHTDGTG 467
             S A+YMARFSLILSKT  L++D++ + V +I DI C D   N V+ ++GKP IH+DGTG
Sbjct: 379  PSPANYMARFSLILSKTKKLEVDMTEITVMQIDDIHCHDQSNNDVLDKNGKPRIHSDGTG 438

Query: 468  FISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLF 527
            +ISEDLA  CP+N+FKG++    +++                  G  ++EPPLLIQ R+F
Sbjct: 439  YISEDLARMCPLNIFKGKSMRSNNIQ------------------GTCVQEPPLLIQIRMF 498

Query: 528  YNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLS 587
             +G AVKG FL+NK LPP+T+Q+R SMIKV  D +L NF T NSLE+V TSNPPKR  LS
Sbjct: 499  NDGSAVKGIFLLNKNLPPQTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPPKRAKLS 558

Query: 588  RNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAG 647
            +NL+ALL+YGGVP ++F++IL++ L+  + +F   RAA + +++ G MDD    +MI+AG
Sbjct: 559  KNLVALLSYGGVPNDFFLDILLNTLEKKKTIFFKVRAAGKAALHYGNMDDKNALQMIMAG 618

Query: 648  IPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILENGQI 707
            IPLDE YL++ LS LLK EK  LK+G+L + E YYLMGTVDPT  L+ DEV  + ++   
Sbjct: 619  IPLDEPYLKHYLSKLLKLEKDDLKAGKLPIDESYYLMGTVDPTGELKEDEVSGLAKSQD- 678

Query: 708  NGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFDG 767
               VLVYRNPGLHFGDIH+L A YV+ L   VGN+KY +FF  KGPRS+GDEIAGGDFDG
Sbjct: 679  ---VLVYRNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQKGPRSLGDEIAGGDFDG 738

Query: 768  DMYWVSRNSQLLEYFRPCEPW-RPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQPS 827
            DMY++SRN +LLE+++P EPW   SP +++ T ++P E S E+LE ELFK+FL T F PS
Sbjct: 739  DMYFISRNPKLLEHYKPSEPWVSSSPRSKIYTGRQPSELSPEQLEEELFKIFLKTGFSPS 798

Query: 828  YAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKGRKIEVPKH 887
                 AAD+WLA+MD+FL LG+E  +E+  ++ K+L L +IYYDA+DAPK G ++ +P  
Sbjct: 799  SVIGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKLTDIYYDAIDAPKTGTEVNLPLD 858

Query: 888  LKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQ-EEVPNIEVQKLPCFEEE-VPEYIFM 947
            +K    PH+MER K ++ STSILG IFDTV+ +  E+     + KL CFE+E V E+   
Sbjct: 859  VKVDLFPHYMERNK-TFKSTSILGLIFDTVDFHNAEDTTPSGISKLQCFEDEPVSEFDME 918

Query: 948  KWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQEAL 1007
            K K  ++ YRK+M  AM  D D    +    I+KYK+  Y A   + S +  E++Y +AL
Sbjct: 919  KCKLWHKDYRKEMCQAMNSDDDD---SCNEVIQKYKQEFYSAAGFKESKKILEELYPKAL 927

[Close]
BLAST of Chy2G034180 vs. ExPASy Swiss-Prot
Match: Q5QMN5 (Probable RNA-dependent RNA polymerase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR3 PE=2 SV=2)

HSP 1 Score: 770.4 bits (1988), Expect = 2.7e-221
Identity = 425/896 (47.43%), Postives = 555/896 (61.94%), Query Frame = 0 

Query: 195  QFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTN 254
            Q +AL EL FRK F++ +Y+  E +E V + D I+SL  L+M +FE ++W+ FG KY+  
Sbjct: 291  QMLALEELGFRKIFMVFAYLASEKIENVLSVDYIRSLKFLSMAQFESQIWRTFGHKYIAA 350

Query: 255  EERRVHVDWDRRKTHIYHCHVALDGSC---SFKGPFLNNTKTHLQRVLGDDNVLMVKFAE 314
             +R  ++D D   T +YHC+VA+ G      FKGP++ NT+THLQ+V+GDDNVL+VKF  
Sbjct: 351  SDRAKNLDSDPGMTKVYHCNVAIRGDTVVKIFKGPYIENTRTHLQKVVGDDNVLVVKFMG 410

Query: 315  DKSDTPLSNHSGGSFYA--YSKIARDGILLGLRRYRFFVFKDGGKEGK-------KKNPT 374
              SDT     +  S Y   Y K+A DGI+LGLRRYRFFV+KDGGKE K        KN  
Sbjct: 411  KLSDT----KTDFSTYCEHYHKVAEDGIVLGLRRYRFFVYKDGGKEEKLKQEKIEDKNKC 470

Query: 375  TSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKT 434
            TS V CYFVR ES   +D  EPY LS RTV +AR LFMH     ++A YMARF+LILSKT
Sbjct: 471  TSPVMCYFVRTESGWNMD--EPYILSGRTVGQARELFMHISSAPTLAKYMARFALILSKT 530

Query: 435  INLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQ 494
            I    DLS V V+RI D PC D +GNV+++D +PLIHTDGTG +S DLAL CP ++FKG+
Sbjct: 531  ITWDADLSAVYVRRIKDEPCMDRHGNVVHKDQEPLIHTDGTGLVSVDLALNCPTSIFKGK 590

Query: 495  AKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLVNKQLPP 554
                                         L+  PLL+QFRLFYNG AVKGT LV+++LPP
Sbjct: 591  F----------------------------LKPQPLLMQFRLFYNGSAVKGTVLVDRRLPP 650

Query: 555  RTIQIRDSMIKVEIDPD---------------------LENFETENSLELVGTSNPPKRT 614
             TI IR SM+K+E  P+                     L   ++ NS E+V TSN P+RT
Sbjct: 651  ATILIRPSMVKIETHPELSGVRSVNSSEIVSARNAKKSLSGVQSVNSFEIVSTSNRPRRT 710

Query: 615  FLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMI 674
              SR LI LL YGGVP EYF+ +L  A++  +        ALR++ +  +M+D + ARMI
Sbjct: 711  LTSRFLITLLCYGGVPEEYFLELLQSAIEGAENACYDYEDALRIAFSYADMEDSMSARMI 770

Query: 675  LAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILEN 734
            L+GIPL+ESYLQ+RL  + ++E+K +K G++ + ECYYLM T DPT TL  +EVCVILEN
Sbjct: 771  LSGIPLEESYLQHRLDFMAQQERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVILEN 830

Query: 735  GQINGKVLVYRNPGLHFGDIHVLTAKYVEKL-VPVVGNAKYAIFFSSKGPRSVGDEIAGG 794
            GQ +G VLVY++PGLHFGDIHVL A Y+  L    VG AKYAI F   GPRS+ DE+A  
Sbjct: 831  GQFSGDVLVYKHPGLHFGDIHVLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEMANS 890

Query: 795  DFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRF 854
            DFDGD+YWVS+N +LLE+F+P EPW  +   +    KKP++ +  +LE  LF  FL TRF
Sbjct: 891  DFDGDIYWVSKNPKLLEHFKPSEPWVQAIKPKKTKQKKPQDCNESKLERLLFHEFLKTRF 950

Query: 855  QPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKGRKIEV 914
             PS+A   AAD+WLA MD+ L+     + E+  I  K+L L+++YY ALDAPK G K+ +
Sbjct: 951  TPSFALGTAADSWLAYMDR-LLTDSLDEIEKKLIEEKMLKLVDLYYLALDAPKTGNKVNI 1010

Query: 915  PKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQE----EVPNIEVQKLPCF-EEEV 974
            P  L     PHFM R   SY S+SILGQI+D     +      V  I V  LPCF E E 
Sbjct: 1011 PSDLMVKQYPHFMGR-SFSYHSSSILGQIYDKAEDVESLRSCNVQPIGVSLLPCFMEREA 1070

Query: 975  PEYIFMKWKFLYELYRKD--MVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSN 1034
            P      W+  YE Y  D  M+    +D + +N+  +   +KYK +LY A E E + R  
Sbjct: 1071 PPAARHLWQHRYEEYLTDSTMLYRAMVDKEERNMKFQELYEKYKHMLYDASEFEQTQRDP 1130

Query: 1035 EDVYQEALAIYQVTYDHA-MSRSVRNCGFAWKVAGSALFNLYAIKHSERSFLHCLP 1049
            +DV+ EA  IYQ+ Y+ A  S     CGFAWKVAG AL + YA+K+   + L  LP
Sbjct: 1131 DDVFSEACVIYQIVYEKARWSNDASRCGFAWKVAGRALCHFYALKNEGDTALCSLP 1150

[Close]
BLAST of Chy2G034180 vs. ExPASy Swiss-Prot
Match: Q5QMN4 (Probable RNA-dependent RNA polymerase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR4 PE=2 SV=2)

HSP 1 Score: 751.9 bits (1940), Expect = 9.8e-216
Identity = 415/902 (46.01%), Postives = 557/902 (61.75%), Query Frame = 0 

Query: 195  QFVALGELEFRKAFLLLSYIG--------------GESLERVTTADQIQSLSQLTMEKFE 254
            Q +ALGELEFRK F++ +Y+                  +E V + D I+SL  ++M +FE
Sbjct: 278  QMLALGELEFRKIFMIFAYLSWNKKGVKPPLSTPKSSKIEDVLSVDSIRSLKSMSMAQFE 337

Query: 255  DEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGSC---SFKGPFLNNTKTHLQR 314
              +W  FG   +++ +R  ++D     + +YHC+V + G      FKGP++ N +THLQ+
Sbjct: 338  SRIWSTFGHDNISSSDRAKNLDSGPGMSKVYHCNVEIRGGTVVKIFKGPYIENRRTHLQK 397

Query: 315  VLGDDNVLMVKFAEDKSD--TPLSNHSGGSFYAYSKIARDGILLGLRRYRFFVFKDGGKE 374
            VLGDDNVL+VKF E  SD  T LS +       Y K+A +GI+LGLR YRFF++KDGGKE
Sbjct: 398  VLGDDNVLVVKFMEISSDTETDLSTY----LEHYHKVAEEGIVLGLRCYRFFLYKDGGKE 457

Query: 375  GKKKNPT--------TSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSS 434
             K K           TS+V+CYFVR ES   +D  EPY LS RT+ +AR LFMH   V +
Sbjct: 458  NKMKEENREEENKKCTSSVRCYFVRTESGWNMD--EPYILSGRTIGQARDLFMHIRTVLT 517

Query: 435  IASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFIS 494
            +A YM RF+LI+SKTI L +DLS V V+ I D PC D +G  ++RDG+ LIHTDGTG IS
Sbjct: 518  LAKYMLRFALIVSKTITLDVDLSEVLVKLIDDEPCLDEHGKEVFRDGERLIHTDGTGLIS 577

Query: 495  EDLALECPMNVFKGQAKHDADLKRIPAFE--GFQNKTLQLTLPGLELREPPLLIQFRLFY 554
            EDLA +C  +  KG+     D+    A +  G  N T           E PLLIQ RLFY
Sbjct: 578  EDLAQKCTYSNSKGKLLEPQDIVDCAASKLMGSNNTT-----------EYPLLIQLRLFY 637

Query: 555  NGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSL---------------- 614
            NG AVKGT LV+K+LPPRTI IR SM+K++  P+L   ++ NSL                
Sbjct: 638  NGSAVKGTVLVDKRLPPRTIHIRPSMLKIKTYPELSGVQSVNSLDIVSARNAKKSLSGVQ 697

Query: 615  -----ELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALR 674
                 E+V TSN   RTF S NLIALL+YGGVP E+FM +L  A+++          AL 
Sbjct: 698  SVNSFEIVSTSNRSGRTFTSNNLIALLHYGGVPEEFFMELLQTAIEEADNARFDYAGALN 757

Query: 675  VSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTV 734
            ++ N  +M+D + ARMIL+GIPL+ESYLQ RL  L   E+K +K+G++ + +CYYLMGT 
Sbjct: 758  IAFNYADMEDSMPARMILSGIPLEESYLQSRLDFLSLLERKGIKNGKIPIDDCYYLMGTA 817

Query: 735  DPTFTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIF 794
            DPT  L  +EVCVIL+ GQ++G VLVY+ PGLH GDIHVL A Y   +  VVGN+K+AI 
Sbjct: 818  DPTGKLGPNEVCVILDYGQVSGDVLVYKYPGLHPGDIHVLKATYSSDIEKVVGNSKHAIL 877

Query: 795  FSSKGPRSVGDEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSS 854
            F + G RS+ DE+A  DFDGD+YWVS N +LLE+F+P +PW P+ +      K P++F+ 
Sbjct: 878  FPTTGQRSLADEMANSDFDGDIYWVSLNPKLLEHFKPSKPWVPAITPNGTKQKGPEDFNE 937

Query: 855  EELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINI 914
             ELE  LF  FL TRF PSYA++ AA NWL  MD+ L +  + + E+  I  K+L L+++
Sbjct: 938  SELERVLFHEFLKTRFAPSYARATAATNWLVYMDRLLTVSLD-ESEKKLIEKKMLKLVDL 997

Query: 915  YYDALDAPKKGRKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVN----MYQEEV 974
            YY ALDAPK G K+ +P+ L     PHFM+R   SY S+SILG+I+D       +  + V
Sbjct: 998  YYLALDAPKMGNKVNIPRDLMVKQYPHFMDRSP-SYHSSSILGKIYDKAGDPKPLRSDNV 1057

Query: 975  PNIEVQKLPCF-EEEVPEYIFMKWKFLYELYRKD--MVDAMQLDPDAKNIAAEATIKKYK 1034
                +  LPCF E +VP  I   W+  Y  Y  D  ++ A + D + K I  +   +KYK
Sbjct: 1058 QPTSISSLPCFAERDVPPAIKQLWQHRYNEYLADSSLLYAEEADEEEKKIKFQELYEKYK 1117

Query: 1035 EILYGAEELEGSPRSNEDVYQEALAIYQVTYDHAMS-RSVRNCGFAWKVAGSALFNLYAI 1039
             +LYGA E E +PR  +DV+ EA AIYQ+ Y+ A S  +V  CGFAWKVAG AL + Y +
Sbjct: 1118 HLLYGASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFYTV 1160

[Close]
BLAST of Chy2G034180 vs. ExPASy TrEMBL
Match: A0A0A0LYP8 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_1G574860 PE=3 SV=1)

HSP 1 Score: 2037.7 bits (5278), Expect = 0.0e+00
Identity = 1027/1061 (96.80%), Postives = 1037/1061 (97.74%), Query Frame = 0 

Query: 1    MNIPNSVRGRIKGTVFQNGFYRHADLLLRRRNLHCFASAFAMADHFLEVSLPPSVEQFLL 60
            MNI NSVRGRIKGTVFQNGFYR+ADLLLRRRNLHC ASAFAMADHFLEVSLPPSVEQFLL
Sbjct: 10   MNIRNSVRGRIKGTVFQNGFYRYADLLLRRRNLHCSASAFAMADHFLEVSLPPSVEQFLL 69

Query: 61   HICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCSTVRNLNGFILHLVRKDSCASPQK 120
            HICKLHDQPLPDTEVL ALASVGEVAALD LHKISCSTVRNL+GFILHLVRKDSCASPQ 
Sbjct: 70   HICKLHDQPLPDTEVLRALASVGEVAALDALHKISCSTVRNLSGFILHLVRKDSCASPQN 129

Query: 121  KMVRVSPHQSP-SSCPVSQLQSPSTCSVSLHQSPSTFSVCSGEGLGIAENASLQPPTAEK 180
            KMVRVSPHQSP SSCPVSQLQSPSTCSVSLHQSPSTFSVCSG+GLG AENASLQPPT EK
Sbjct: 130  KMVRVSPHQSPSSSCPVSQLQSPSTCSVSLHQSPSTFSVCSGQGLGTAENASLQPPTPEK 189

Query: 181  SGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKF 240
            SGSFSSSV DRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKF
Sbjct: 190  SGSFSSSVLDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKF 249

Query: 241  EDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGSCSFKGPFLNNTKTHLQRVL 300
            EDEVWKIFGKKYVTNEERRV+VDWDRRKTHIYHCHVALDGSC FKGPFLNNTKTHLQRVL
Sbjct: 250  EDEVWKIFGKKYVTNEERRVYVDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVL 309

Query: 301  GDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYRFFVFKDGGKEGKKK 360
            GDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRY FFVFKDGGKE KKK
Sbjct: 310  GDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKKK 369

Query: 361  NPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLIL 420
            NPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLIL
Sbjct: 370  NPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLIL 429

Query: 421  SKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVF 480
            SKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVF
Sbjct: 430  SKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVF 489

Query: 481  KGQAKHDADLK----RIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFL 540
            KGQAKHDADLK    RIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFL
Sbjct: 490  KGQAKHDADLKAIWQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFL 549

Query: 541  VNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGG 600
            +NKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGG
Sbjct: 550  LNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGG 609

Query: 601  VPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYR 660
            VPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYR
Sbjct: 610  VPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYR 669

Query: 661  LSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILENGQINGKVLVYRNPG 720
            LSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLES EVCVILENGQINGKVLVYRNPG
Sbjct: 670  LSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGEVCVILENGQINGKVLVYRNPG 729

Query: 721  LHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFDGDMYWVSRNSQL 780
            LHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSV DEIAGGDFDGDMYWVSRNSQL
Sbjct: 730  LHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVADEIAGGDFDGDMYWVSRNSQL 789

Query: 781  LEYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQPSYAKSVAADNWLA 840
            LEYFRPCEPWRPSPSTEVVTNKKPKEFS++ELENELFKLFLSTRFQPSYAKSVAADNWLA
Sbjct: 790  LEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRFQPSYAKSVAADNWLA 849

Query: 841  LMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKK-GRKIEVPKHLKAGTLPHFME 900
            LMDQFLMLGEERKEERN IRAKIL LINIYYDALDAPKK G+KIEVPKHLKAGTLPHFME
Sbjct: 850  LMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFME 909

Query: 901  RGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEYIFMKWKFLYELYRKDM 960
            RGKNSYVSTSILGQIFDT NMYQEEVPNIEVQKLPCFEEE+PEYIFMKWKFLYELYRKDM
Sbjct: 910  RGKNSYVSTSILGQIFDTANMYQEEVPNIEVQKLPCFEEELPEYIFMKWKFLYELYRKDM 969

Query: 961  VDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQEALAIYQVTYDHAMSR 1020
            VDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNE+VYQEALAIYQVTYDHAMSR
Sbjct: 970  VDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMSR 1029

Query: 1021 SVRNCGFAWKVAGSALFNLYAIKHSERSFLHCLPSVMREIF 1056
            SVRNCGFAWKVAGSALF LYAIKHSERSF HCLPSVMREIF
Sbjct: 1030 SVRNCGFAWKVAGSALFKLYAIKHSERSF-HCLPSVMREIF 1069

[Close]
BLAST of Chy2G034180 vs. ExPASy TrEMBL
Match: A0A5D3CF42 (RNA-dependent RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003000 PE=3 SV=1)

HSP 1 Score: 1909.8 bits (4946), Expect = 0.0e+00
Identity = 964/1018 (94.70%), Postives = 983/1018 (96.56%), Query Frame = 0 

Query: 42   MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCST-VR 101
            MADHFLEVSLPPSVE FLL IC+LHDQPLPD EV WALASVGEVAALD LHKISCS+ VR
Sbjct: 1    MADHFLEVSLPPSVEHFLLQICELHDQPLPDAEVRWALASVGEVAALDALHKISCSSPVR 60

Query: 102  NLNGFILHLVRKDSCASPQKKMVRVSPHQSPSS-CPVSQLQSPSTCSVSLHQSPSTFSVC 161
            NL+GFILH+VRKDSCASPQ KMVRVSPHQSPSS C VSQLQSPSTCSVSLHQS STFS+ 
Sbjct: 61   NLSGFILHMVRKDSCASPQNKMVRVSPHQSPSSCCRVSQLQSPSTCSVSLHQSLSTFSLS 120

Query: 162  SGEGLGIAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL 221
            SG+GLG AENAS QPPT EKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL
Sbjct: 121  SGQGLGTAENASFQPPTPEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL 180

Query: 222  ERVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDG 281
            ERVTTA+QIQSLSQL MEKFEDEVWKIFGKKY+TNEERR++VDWDRRKTHIYHC+VALDG
Sbjct: 181  ERVTTAEQIQSLSQLAMEKFEDEVWKIFGKKYITNEERRMYVDWDRRKTHIYHCYVALDG 240

Query: 282  SCSFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILL 341
            S  FKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDT L NH+GGSFYAY+KIARDGILL
Sbjct: 241  SYRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTHLPNHTGGSFYAYNKIARDGILL 300

Query: 342  GLRRYRFFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLF 401
            GLRRYRFFVFKDGGKE KKKNPTTSAVKCYFVRMESDAY+DKIEPYKLSNRTVFEARSLF
Sbjct: 301  GLRRYRFFVFKDGGKEEKKKNPTTSAVKCYFVRMESDAYVDKIEPYKLSNRTVFEARSLF 360

Query: 402  MHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIH 461
            MHAHMVSSIASYMARFSLILSKTI LKIDLSTV VQRIGDIPCKDIYGNVIYRDGKPLIH
Sbjct: 361  MHAHMVSSIASYMARFSLILSKTIKLKIDLSTVKVQRIGDIPCKDIYGNVIYRDGKPLIH 420

Query: 462  TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLI 521
            TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTL LTLPGLELREPPLLI
Sbjct: 421  TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLPLTLPGLELREPPLLI 480

Query: 522  QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPK 581
            QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDL NFETENSLELVGTSNPPK
Sbjct: 481  QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLVNFETENSLELVGTSNPPK 540

Query: 582  RTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR 641
            RTFLSRNLIALLNYGGVPREYFM ILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR
Sbjct: 541  RTFLSRNLIALLNYGGVPREYFMTILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR 600

Query: 642  MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVIL 701
            MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLH+PECYYLMGTVDPT TLES EVCVIL
Sbjct: 601  MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHMPECYYLMGTVDPTCTLESGEVCVIL 660

Query: 702  ENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAG 761
            ENGQINGKVLVYRNPGLHFGDIHVLTAKYVE+LVPVVGNAKYAIFFSSKGPRSV DEIAG
Sbjct: 661  ENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYAIFFSSKGPRSVADEIAG 720

Query: 762  GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFLSTR 821
            GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTN+KPKEFS EELENELFKLFLSTR
Sbjct: 721  GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNRKPKEFSVEELENELFKLFLSTR 780

Query: 822  FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKK-GRKI 881
            FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKIL LINIYYDALDAPKK G+KI
Sbjct: 781  FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILQLINIYYDALDAPKKGGKKI 840

Query: 882  EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY 941
            EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY
Sbjct: 841  EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY 900

Query: 942  IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQ 1001
            IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSN+DVYQ
Sbjct: 901  IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNDDVYQ 960

Query: 1002 EALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFNLYAIKHSERSFLHCLPSVMREIFS 1057
            EALAIYQVTYDHAMS SVRNC FAWKVAGSALF LYAIKHSERSFL CLPSVMREIFS
Sbjct: 961  EALAIYQVTYDHAMSHSVRNCVFAWKVAGSALFKLYAIKHSERSFL-CLPSVMREIFS 1017

[Close]
BLAST of Chy2G034180 vs. ExPASy TrEMBL
Match: A0A1S3BPE5 (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103492255 PE=3 SV=1)

HSP 1 Score: 1909.4 bits (4945), Expect = 0.0e+00
Identity = 965/1018 (94.79%), Postives = 981/1018 (96.37%), Query Frame = 0 

Query: 42   MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCST-VR 101
            MADHFLEVSLPPSVE FLL IC+LHDQPLPD EV WALASVGEVAALD LHKISCS+ VR
Sbjct: 1    MADHFLEVSLPPSVEHFLLQICELHDQPLPDAEVRWALASVGEVAALDALHKISCSSPVR 60

Query: 102  NLNGFILHLVRKDSCASPQKKMVRVSPHQSPSS-CPVSQLQSPSTCSVSLHQSPSTFSVC 161
            NL+GFILH+VRKDSCASPQ KMVRVSPHQSPSS C VSQLQSPSTCSVSLHQS STFSV 
Sbjct: 61   NLSGFILHMVRKDSCASPQNKMVRVSPHQSPSSCCRVSQLQSPSTCSVSLHQSLSTFSVS 120

Query: 162  SGEGLGIAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL 221
            SG+GLG AENAS QPPT EKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL
Sbjct: 121  SGQGLGTAENASFQPPTPEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL 180

Query: 222  ERVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDG 281
            ERVTTA+QIQSLSQL MEKFEDEVWKIFGKKY+TNEERRV+VDWDRRKTHIYHC+VALDG
Sbjct: 181  ERVTTAEQIQSLSQLAMEKFEDEVWKIFGKKYITNEERRVYVDWDRRKTHIYHCYVALDG 240

Query: 282  SCSFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILL 341
            S  FKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDT L NH+GGSFY Y+KIARDGILL
Sbjct: 241  SYRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTHLPNHTGGSFYVYNKIARDGILL 300

Query: 342  GLRRYRFFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLF 401
            GLRRYRFFVFKDGGKE KKKNPTTSAVKCYFVRMESDAY+DKIEPYKLSNRTVFEARSLF
Sbjct: 301  GLRRYRFFVFKDGGKEEKKKNPTTSAVKCYFVRMESDAYVDKIEPYKLSNRTVFEARSLF 360

Query: 402  MHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIH 461
            MHAHMVSSIASYMARFSLILSKTI LKIDLSTV VQRIGDIPCKDIYGNVIYRDGKPLIH
Sbjct: 361  MHAHMVSSIASYMARFSLILSKTIKLKIDLSTVKVQRIGDIPCKDIYGNVIYRDGKPLIH 420

Query: 462  TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLI 521
            TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTL LTLPGLELREPPLLI
Sbjct: 421  TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLPLTLPGLELREPPLLI 480

Query: 522  QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPK 581
            QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDL NFETENSLELVGTSNPPK
Sbjct: 481  QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLVNFETENSLELVGTSNPPK 540

Query: 582  RTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR 641
            RTFLSRNLIALLNYGGVPREYFM ILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR
Sbjct: 541  RTFLSRNLIALLNYGGVPREYFMTILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR 600

Query: 642  MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVIL 701
            MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPT TLES EVCVIL
Sbjct: 601  MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTCTLESGEVCVIL 660

Query: 702  ENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAG 761
            ENGQINGKVLVYRNPGLH GDIHVLTAKYVE+LVPVVGNAKYAIFFSSKGPRSV DEIAG
Sbjct: 661  ENGQINGKVLVYRNPGLHLGDIHVLTAKYVEELVPVVGNAKYAIFFSSKGPRSVADEIAG 720

Query: 762  GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFLSTR 821
            GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTN+KPKEFS EELENELFKLFLSTR
Sbjct: 721  GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNRKPKEFSVEELENELFKLFLSTR 780

Query: 822  FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKK-GRKI 881
            FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKIL LINIYYDALDAPKK G+KI
Sbjct: 781  FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILQLINIYYDALDAPKKGGKKI 840

Query: 882  EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY 941
            EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY
Sbjct: 841  EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY 900

Query: 942  IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQ 1001
            IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSN+DVYQ
Sbjct: 901  IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNDDVYQ 960

Query: 1002 EALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFNLYAIKHSERSFLHCLPSVMREIFS 1057
            EALAIYQVTYDHAMS SVRNC FAWKVAGSALF LYAIKHSERSFL CLPSVMREIFS
Sbjct: 961  EALAIYQVTYDHAMSHSVRNCVFAWKVAGSALFKLYAIKHSERSFL-CLPSVMREIFS 1017

[Close]
BLAST of Chy2G034180 vs. ExPASy TrEMBL
Match: A0A1S4DYX6 (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103492255 PE=3 SV=1)

HSP 1 Score: 1894.4 bits (4906), Expect = 0.0e+00
Identity = 965/1046 (92.26%), Postives = 981/1046 (93.79%), Query Frame = 0 

Query: 42   MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCST-VR 101
            MADHFLEVSLPPSVE FLL IC+LHDQPLPD EV WALASVGEVAALD LHKISCS+ VR
Sbjct: 1    MADHFLEVSLPPSVEHFLLQICELHDQPLPDAEVRWALASVGEVAALDALHKISCSSPVR 60

Query: 102  NLNGFILHLVRKDSCASPQKKMVRVSPHQSPSS-CPVSQLQSPSTCSVSLHQSPSTFSVC 161
            NL+GFILH+VRKDSCASPQ KMVRVSPHQSPSS C VSQLQSPSTCSVSLHQS STFSV 
Sbjct: 61   NLSGFILHMVRKDSCASPQNKMVRVSPHQSPSSCCRVSQLQSPSTCSVSLHQSLSTFSVS 120

Query: 162  SGEGLGIAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL 221
            SG+GLG AENAS QPPT EKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL
Sbjct: 121  SGQGLGTAENASFQPPTPEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL 180

Query: 222  ERVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDG 281
            ERVTTA+QIQSLSQL MEKFEDEVWKIFGKKY+TNEERRV+VDWDRRKTHIYHC+VALDG
Sbjct: 181  ERVTTAEQIQSLSQLAMEKFEDEVWKIFGKKYITNEERRVYVDWDRRKTHIYHCYVALDG 240

Query: 282  SCSFK----------------------------GPFLNNTKTHLQRVLGDDNVLMVKFAE 341
            S  FK                            GPFLNNTKTHLQRVLGDDNVLMVKFAE
Sbjct: 241  SYRFKIFAAQSYNFYSVDQKLNLLQHGLKFLSSGPFLNNTKTHLQRVLGDDNVLMVKFAE 300

Query: 342  DKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYRFFVFKDGGKEGKKKNPTTSAVKCYFV 401
            DKSDT L NH+GGSFY Y+KIARDGILLGLRRYRFFVFKDGGKE KKKNPTTSAVKCYFV
Sbjct: 301  DKSDTHLPNHTGGSFYVYNKIARDGILLGLRRYRFFVFKDGGKEEKKKNPTTSAVKCYFV 360

Query: 402  RMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLST 461
            RMESDAY+DKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTI LKIDLST
Sbjct: 361  RMESDAYVDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTIKLKIDLST 420

Query: 462  VNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKR 521
            V VQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKR
Sbjct: 421  VKVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKR 480

Query: 522  IPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSM 581
            IPAFEGFQNKTL LTLPGLELREPPLLIQFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSM
Sbjct: 481  IPAFEGFQNKTLPLTLPGLELREPPLLIQFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSM 540

Query: 582  IKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMNILVDALKD 641
            IKVEIDPDL NFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFM ILVDALKD
Sbjct: 541  IKVEIDPDLVNFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMTILVDALKD 600

Query: 642  VQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGR 701
            VQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGR
Sbjct: 601  VQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGR 660

Query: 702  LHVPECYYLMGTVDPTFTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEK 761
            LHVPECYYLMGTVDPT TLES EVCVILENGQINGKVLVYRNPGLH GDIHVLTAKYVE+
Sbjct: 661  LHVPECYYLMGTVDPTCTLESGEVCVILENGQINGKVLVYRNPGLHLGDIHVLTAKYVEE 720

Query: 762  LVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPST 821
            LVPVVGNAKYAIFFSSKGPRSV DEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPST
Sbjct: 721  LVPVVGNAKYAIFFSSKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPST 780

Query: 822  EVVTNKKPKEFSSEELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEER 881
            EVVTN+KPKEFS EELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEER
Sbjct: 781  EVVTNRKPKEFSVEELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEER 840

Query: 882  NRIRAKILLLINIYYDALDAPKK-GRKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIF 941
            NRIRAKIL LINIYYDALDAPKK G+KIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIF
Sbjct: 841  NRIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIF 900

Query: 942  DTVNMYQEEVPNIEVQKLPCFEEEVPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAE 1001
            DTVNMYQEEVPNIEVQKLPCFEEEVPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAE
Sbjct: 901  DTVNMYQEEVPNIEVQKLPCFEEEVPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAE 960

Query: 1002 ATIKKYKEILYGAEELEGSPRSNEDVYQEALAIYQVTYDHAMSRSVRNCGFAWKVAGSAL 1057
            ATIKKYKEILYGAEELEGSPRSN+DVYQEALAIYQVTYDHAMS SVRNC FAWKVAGSAL
Sbjct: 961  ATIKKYKEILYGAEELEGSPRSNDDVYQEALAIYQVTYDHAMSHSVRNCVFAWKVAGSAL 1020

[Close]
BLAST of Chy2G034180 vs. ExPASy TrEMBL
Match: A0A6J1CU26 (RNA-dependent RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111014566 PE=3 SV=1)

HSP 1 Score: 1703.0 bits (4409), Expect = 0.0e+00
Identity = 864/1016 (85.04%), Postives = 919/1016 (90.45%), Query Frame = 0 

Query: 42   MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCSTVRN 101
            MAD F EV LPPSVEQ LL IC   +QP PD +V  ALAS+GE AALD LHKIS   VR+
Sbjct: 1    MADQFQEVPLPPSVEQLLLEICMQQNQPPPDAKVRLALASLGEEAALDTLHKISSRAVRS 60

Query: 102  LNGFILHLVRKDSCASPQKKMVRVSPHQSPSSCPVSQLQSPSTCSVSLHQSPSTFSVCSG 161
            L GFILH+VR D C +PQKKMV VSPHQSPSS  VS  QSPSTCSVS HQSPST  V S 
Sbjct: 61   LGGFILHMVRNDPC-TPQKKMVWVSPHQSPSSSGVSPFQSPSTCSVSPHQSPSTCRVYSP 120

Query: 162  EGLGIAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESLER 221
            +GLG  E  S QPPT EKSGSFSSSVSDRA I QFVALGELEFRKAFL+LSYIGGESLE 
Sbjct: 121  QGLGTTERTSFQPPTLEKSGSFSSSVSDRANIPQFVALGELEFRKAFLILSYIGGESLEM 180

Query: 222  VTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGSC 281
            V TADQI+SLSQL MEKFE EVWK FG+K V+ E+RRV+VDWDRRKTHIYHC+VALDGS 
Sbjct: 181  VATADQIRSLSQLPMEKFELEVWKTFGEKCVSKEDRRVNVDWDRRKTHIYHCYVALDGSY 240

Query: 282  SFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGL 341
             FKGPFLNNTKTHLQRVLGDDNVLMVKFA+D SD   +NH GGSFYAY+KIARDGILLGL
Sbjct: 241  KFKGPFLNNTKTHLQRVLGDDNVLMVKFAKDTSDRCSTNHLGGSFYAYNKIARDGILLGL 300

Query: 342  RRYRFFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMH 401
            R+Y FFVFKDGGKE KKKNPT SAVKCYFVRMESDAY+DKI PYKLSN+T+FEARSLFMH
Sbjct: 301  RQYCFFVFKDGGKEEKKKNPTASAVKCYFVRMESDAYLDKIRPYKLSNKTLFEARSLFMH 360

Query: 402  AHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTD 461
            AHMVSS+ASYMARFSLILSK+INLKIDLSTVNVQRIGDIPCKD+YGNVIYRDGKPLIHTD
Sbjct: 361  AHMVSSVASYMARFSLILSKSINLKIDLSTVNVQRIGDIPCKDVYGNVIYRDGKPLIHTD 420

Query: 462  GTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLIQF 521
            GTGFISEDLALECPMNVFKGQAKHD +LKR  AFE FQNKTLQLTLPGLELREPPLLIQF
Sbjct: 421  GTGFISEDLALECPMNVFKGQAKHDTNLKRFSAFEEFQNKTLQLTLPGLELREPPLLIQF 480

Query: 522  RLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRT 581
            RLFYNG AVKGTFL+NKQLP RTIQIR+SMIKVEIDP+LEN +TENS+E+VGTSN PK+T
Sbjct: 481  RLFYNGRAVKGTFLINKQLPSRTIQIRNSMIKVEIDPNLENAKTENSMEVVGTSNHPKKT 540

Query: 582  FLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMI 641
            FLSRNLIALLNYGGVPREYFMNILVDAL DVQGVFSSKRAALRVSINNG++DDFLVARMI
Sbjct: 541  FLSRNLIALLNYGGVPREYFMNILVDALSDVQGVFSSKRAALRVSINNGDLDDFLVARMI 600

Query: 642  LAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILEN 701
            L+GIPLDESYLQYRLS+LL+EEKKSLKSGRLHVP CYYLMGT DPT TLESDEVCVILEN
Sbjct: 601  LSGIPLDESYLQYRLSMLLREEKKSLKSGRLHVPGCYYLMGTADPTCTLESDEVCVILEN 660

Query: 702  GQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGD 761
            GQINGKVLVYRNPGLHFGDIHVLTAKYVE+LVPVVGNAKYAIFFS KGPRSV DEIAGGD
Sbjct: 661  GQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYAIFFSCKGPRSVADEIAGGD 720

Query: 762  FDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQ 821
            FDGDMYWVSRNSQLLEYFRP EPWRPSPS E +TNKKP EFS+E+LE+ELFKLFL+TRFQ
Sbjct: 721  FDGDMYWVSRNSQLLEYFRPGEPWRPSPSMEGITNKKPNEFSAEDLEDELFKLFLTTRFQ 780

Query: 822  PSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKK-GRKIEV 881
            PSYAKSVAADNWLALMDQ LMLGE+RKEERNR+RAKIL LINIYYDALDAPKK G+KIEV
Sbjct: 781  PSYAKSVAADNWLALMDQLLMLGEDRKEERNRVRAKILQLINIYYDALDAPKKGGKKIEV 840

Query: 882  PKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEYIF 941
            PKHLKAGTLPHFMERGKNSY STSILGQIFDTVNMYQEEVPNIEVQKLPCFE++VP+ I 
Sbjct: 841  PKHLKAGTLPHFMERGKNSYTSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEDQVPDDIL 900

Query: 942  MKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQEA 1001
            MKWKF YE+YR +M DAMQLDPDAKN+AAEATIKKYKEILYGAEELEGSPR  E+V +EA
Sbjct: 901  MKWKFHYEMYRAEMKDAMQLDPDAKNVAAEATIKKYKEILYGAEELEGSPRWLEEVCKEA 960

Query: 1002 LAIYQVTYDHAMSR-SVRNCGFAWKVAGSALFNLYAIKHSERSFLHCLPSVMREIF 1056
            LAIY VTYDHAMS  SVR C FAW+VAGSALF L A K SERSFL CLPSVMREIF
Sbjct: 961  LAIYHVTYDHAMSHGSVRYCSFAWRVAGSALFKLCARKQSERSFL-CLPSVMREIF 1014

[Close]
BLAST of Chy2G034180 vs. NCBI nr
Match: XP_011659949.1 (probable RNA-dependent RNA polymerase 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 2029 bits (5257), Expect = 0.0
Identity = 1027/1061 (96.80%), Postives = 1037/1061 (97.74%), Query Frame = 0 

Query: 1    MNIPNSVRGRIKGTVFQNGFYRHADLLLRRRNLHCFASAFAMADHFLEVSLPPSVEQFLL 60
            MNI NSVRGRIKGTVFQNGFYR+ADLLLRRRNLHC ASAFAMADHFLEVSLPPSVEQFLL
Sbjct: 10   MNIRNSVRGRIKGTVFQNGFYRYADLLLRRRNLHCSASAFAMADHFLEVSLPPSVEQFLL 69

Query: 61   HICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCSTVRNLNGFILHLVRKDSCASPQK 120
            HICKLHDQPLPDTEVL ALASVGEVAALD LHKISCSTVRNL+GFILHLVRKDSCASPQ 
Sbjct: 70   HICKLHDQPLPDTEVLRALASVGEVAALDALHKISCSTVRNLSGFILHLVRKDSCASPQN 129

Query: 121  KMVRVSPHQSPSS-CPVSQLQSPSTCSVSLHQSPSTFSVCSGEGLGIAENASLQPPTAEK 180
            KMVRVSPHQSPSS CPVSQLQSPSTCSVSLHQSPSTFSVCSG+GLG AENASLQPPT EK
Sbjct: 130  KMVRVSPHQSPSSSCPVSQLQSPSTCSVSLHQSPSTFSVCSGQGLGTAENASLQPPTPEK 189

Query: 181  SGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKF 240
            SGSFSSSV DRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKF
Sbjct: 190  SGSFSSSVLDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKF 249

Query: 241  EDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGSCSFKGPFLNNTKTHLQRVL 300
            EDEVWKIFGKKYVTNEERRV+VDWDRRKTHIYHCHVALDGSC FKGPFLNNTKTHLQRVL
Sbjct: 250  EDEVWKIFGKKYVTNEERRVYVDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVL 309

Query: 301  GDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYRFFVFKDGGKEGKKK 360
            GDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRY FFVFKDGGKE KKK
Sbjct: 310  GDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKKK 369

Query: 361  NPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLIL 420
            NPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLIL
Sbjct: 370  NPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLIL 429

Query: 421  SKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVF 480
            SKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVF
Sbjct: 430  SKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVF 489

Query: 481  KGQAKHDADLK----RIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFL 540
            KGQAKHDADLK    RIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFL
Sbjct: 490  KGQAKHDADLKAIWQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFL 549

Query: 541  VNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGG 600
            +NKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGG
Sbjct: 550  LNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGG 609

Query: 601  VPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYR 660
            VPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYR
Sbjct: 610  VPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYR 669

Query: 661  LSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILENGQINGKVLVYRNPG 720
            LSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLES EVCVILENGQINGKVLVYRNPG
Sbjct: 670  LSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGEVCVILENGQINGKVLVYRNPG 729

Query: 721  LHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFDGDMYWVSRNSQL 780
            LHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSV DEIAGGDFDGDMYWVSRNSQL
Sbjct: 730  LHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVADEIAGGDFDGDMYWVSRNSQL 789

Query: 781  LEYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQPSYAKSVAADNWLA 840
            LEYFRPCEPWRPSPSTEVVTNKKPKEFS++ELENELFKLFLSTRFQPSYAKSVAADNWLA
Sbjct: 790  LEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRFQPSYAKSVAADNWLA 849

Query: 841  LMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKG-RKIEVPKHLKAGTLPHFME 900
            LMDQFLMLGEERKEERN IRAKIL LINIYYDALDAPKKG +KIEVPKHLKAGTLPHFME
Sbjct: 850  LMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFME 909

Query: 901  RGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEYIFMKWKFLYELYRKDM 960
            RGKNSYVSTSILGQIFDT NMYQEEVPNIEVQKLPCFEEE+PEYIFMKWKFLYELYRKDM
Sbjct: 910  RGKNSYVSTSILGQIFDTANMYQEEVPNIEVQKLPCFEEELPEYIFMKWKFLYELYRKDM 969

Query: 961  VDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQEALAIYQVTYDHAMSR 1020
            VDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNE+VYQEALAIYQVTYDHAMSR
Sbjct: 970  VDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMSR 1029

Query: 1021 SVRNCGFAWKVAGSALFNLYAIKHSERSFLHCLPSVMREIF 1055
            SVRNCGFAWKVAGSALF LYAIKHSERSF HCLPSVMREIF
Sbjct: 1030 SVRNCGFAWKVAGSALFKLYAIKHSERSF-HCLPSVMREIF 1069

[Close]
BLAST of Chy2G034180 vs. NCBI nr
Match: XP_011659951.1 (probable RNA-dependent RNA polymerase 5 isoform X3 [Cucumis sativus])

HSP 1 Score: 1954 bits (5063), Expect = 0.0
Identity = 989/1020 (96.96%), Postives = 998/1020 (97.84%), Query Frame = 0 

Query: 42   MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCSTVRN 101
            MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVL ALASVGEVAALD LHKISCSTVRN
Sbjct: 1    MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLRALASVGEVAALDALHKISCSTVRN 60

Query: 102  LNGFILHLVRKDSCASPQKKMVRVSPHQSPSS-CPVSQLQSPSTCSVSLHQSPSTFSVCS 161
            L+GFILHLVRKDSCASPQ KMVRVSPHQSPSS CPVSQLQSPSTCSVSLHQSPSTFSVCS
Sbjct: 61   LSGFILHLVRKDSCASPQNKMVRVSPHQSPSSSCPVSQLQSPSTCSVSLHQSPSTFSVCS 120

Query: 162  GEGLGIAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESLE 221
            G+GLG AENASLQPPT EKSGSFSSSV DRARISQFVALGELEFRKAFLLLSYIGGESLE
Sbjct: 121  GQGLGTAENASLQPPTPEKSGSFSSSVLDRARISQFVALGELEFRKAFLLLSYIGGESLE 180

Query: 222  RVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGS 281
            RVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRV+VDWDRRKTHIYHCHVALDGS
Sbjct: 181  RVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVYVDWDRRKTHIYHCHVALDGS 240

Query: 282  CSFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLG 341
            C FKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLG
Sbjct: 241  CRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLG 300

Query: 342  LRRYRFFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFM 401
            LRRY FFVFKDGGKE KKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFM
Sbjct: 301  LRRYHFFVFKDGGKEEKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFM 360

Query: 402  HAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHT 461
            HAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHT
Sbjct: 361  HAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHT 420

Query: 462  DGTGFISEDLALECPMNVFKGQAKHDADLK----RIPAFEGFQNKTLQLTLPGLELREPP 521
            DGTGFISEDLALECPMNVFKGQAKHDADLK    RIPAFEGFQNKTLQLTLPGLELREPP
Sbjct: 421  DGTGFISEDLALECPMNVFKGQAKHDADLKAIWQRIPAFEGFQNKTLQLTLPGLELREPP 480

Query: 522  LLIQFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSN 581
            LLIQFRLFYNGLAVKGTFL+NKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSN
Sbjct: 481  LLIQFRLFYNGLAVKGTFLLNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSN 540

Query: 582  PPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFL 641
            PPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFL
Sbjct: 541  PPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFL 600

Query: 642  VARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVC 701
            VARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLES EVC
Sbjct: 601  VARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGEVC 660

Query: 702  VILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDE 761
            VILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSV DE
Sbjct: 661  VILENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVADE 720

Query: 762  IAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFL 821
            IAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFS++ELENELFKLFL
Sbjct: 721  IAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFL 780

Query: 822  STRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKG- 881
            STRFQPSYAKSVAADNWLALMDQFLMLGEERKEERN IRAKIL LINIYYDALDAPKKG 
Sbjct: 781  STRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGG 840

Query: 882  RKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEV 941
            +KIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDT NMYQEEVPNIEVQKLPCFEEE+
Sbjct: 841  KKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTANMYQEEVPNIEVQKLPCFEEEL 900

Query: 942  PEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNED 1001
            PEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNE+
Sbjct: 901  PEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEE 960

Query: 1002 VYQEALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFNLYAIKHSERSFLHCLPSVMREIF 1055
            VYQEALAIYQVTYDHAMSRSVRNCGFAWKVAGSALF LYAIKHSERSF HCLPSVMREIF
Sbjct: 961  VYQEALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFKLYAIKHSERSF-HCLPSVMREIF 1019

[Close]
BLAST of Chy2G034180 vs. NCBI nr
Match: XP_031744299.1 (probable RNA-dependent RNA polymerase 5 isoform X2 [Cucumis sativus])

HSP 1 Score: 1940 bits (5026), Expect = 0.0
Identity = 989/1060 (93.30%), Postives = 998/1060 (94.15%), Query Frame = 0 

Query: 1    MNIPNSVRGRIKGTVFQNGFYRHADLLLRRRNLHCFASAFAMADHFLEVSLPPSVEQFLL 60
            MNI NSVRGRIKGTVFQNGFYR+ADLLLRRRNLHC ASAFAMADHFLEVSLPPSVEQFLL
Sbjct: 10   MNIRNSVRGRIKGTVFQNGFYRYADLLLRRRNLHCSASAFAMADHFLEVSLPPSVEQFLL 69

Query: 61   HICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCSTVRNLNGFILHLVRKDSCASPQK 120
            HICKLHDQPLPDTEVL ALASVGEVAALD LHKISCST                      
Sbjct: 70   HICKLHDQPLPDTEVLRALASVGEVAALDALHKISCST---------------------- 129

Query: 121  KMVRVSPHQSPSSCPVSQLQSPSTCSVSLHQSPSTFSVCSGEGLGIAENASLQPPTAEKS 180
                              LQSPSTCSVSLHQSPSTFSVCSG+GLG AENASLQPPT EKS
Sbjct: 130  ------------------LQSPSTCSVSLHQSPSTFSVCSGQGLGTAENASLQPPTPEKS 189

Query: 181  GSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFE 240
            GSFSSSV DRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFE
Sbjct: 190  GSFSSSVLDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFE 249

Query: 241  DEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGSCSFKGPFLNNTKTHLQRVLG 300
            DEVWKIFGKKYVTNEERRV+VDWDRRKTHIYHCHVALDGSC FKGPFLNNTKTHLQRVLG
Sbjct: 250  DEVWKIFGKKYVTNEERRVYVDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVLG 309

Query: 301  DDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYRFFVFKDGGKEGKKKN 360
            DDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRY FFVFKDGGKE KKKN
Sbjct: 310  DDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKKKN 369

Query: 361  PTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILS 420
            PTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILS
Sbjct: 370  PTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILS 429

Query: 421  KTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFK 480
            KTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFK
Sbjct: 430  KTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIHTDGTGFISEDLALECPMNVFK 489

Query: 481  GQAKHDADLK----RIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLV 540
            GQAKHDADLK    RIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFL+
Sbjct: 490  GQAKHDADLKAIWQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLL 549

Query: 541  NKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGV 600
            NKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGV
Sbjct: 550  NKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGV 609

Query: 601  PREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRL 660
            PREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRL
Sbjct: 610  PREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRL 669

Query: 661  SVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILENGQINGKVLVYRNPGL 720
            SVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLES EVCVILENGQINGKVLVYRNPGL
Sbjct: 670  SVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGEVCVILENGQINGKVLVYRNPGL 729

Query: 721  HFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFDGDMYWVSRNSQLL 780
            HFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSV DEIAGGDFDGDMYWVSRNSQLL
Sbjct: 730  HFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVADEIAGGDFDGDMYWVSRNSQLL 789

Query: 781  EYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQPSYAKSVAADNWLAL 840
            EYFRPCEPWRPSPSTEVVTNKKPKEFS++ELENELFKLFLSTRFQPSYAKSVAADNWLAL
Sbjct: 790  EYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRFQPSYAKSVAADNWLAL 849

Query: 841  MDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKG-RKIEVPKHLKAGTLPHFMER 900
            MDQFLMLGEERKEERN IRAKIL LINIYYDALDAPKKG +KIEVPKHLKAGTLPHFMER
Sbjct: 850  MDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMER 909

Query: 901  GKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEYIFMKWKFLYELYRKDMV 960
            GKNSYVSTSILGQIFDT NMYQEEVPNIEVQKLPCFEEE+PEYIFMKWKFLYELYRKDMV
Sbjct: 910  GKNSYVSTSILGQIFDTANMYQEEVPNIEVQKLPCFEEELPEYIFMKWKFLYELYRKDMV 969

Query: 961  DAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQEALAIYQVTYDHAMSRS 1020
            DAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNE+VYQEALAIYQVTYDHAMSRS
Sbjct: 970  DAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMSRS 1028

Query: 1021 VRNCGFAWKVAGSALFNLYAIKHSERSFLHCLPSVMREIF 1055
            VRNCGFAWKVAGSALF LYAIKHSERSF HCLPSVMREIF
Sbjct: 1030 VRNCGFAWKVAGSALFKLYAIKHSERSF-HCLPSVMREIF 1028

[Close]
BLAST of Chy2G034180 vs. NCBI nr
Match: TYK10155.1 (putative RNA-dependent RNA polymerase 5 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 1902 bits (4926), Expect = 0.0
Identity = 964/1018 (94.70%), Postives = 983/1018 (96.56%), Query Frame = 0 

Query: 42   MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCST-VR 101
            MADHFLEVSLPPSVE FLL IC+LHDQPLPD EV WALASVGEVAALD LHKISCS+ VR
Sbjct: 1    MADHFLEVSLPPSVEHFLLQICELHDQPLPDAEVRWALASVGEVAALDALHKISCSSPVR 60

Query: 102  NLNGFILHLVRKDSCASPQKKMVRVSPHQSPSSC-PVSQLQSPSTCSVSLHQSPSTFSVC 161
            NL+GFILH+VRKDSCASPQ KMVRVSPHQSPSSC  VSQLQSPSTCSVSLHQS STFS+ 
Sbjct: 61   NLSGFILHMVRKDSCASPQNKMVRVSPHQSPSSCCRVSQLQSPSTCSVSLHQSLSTFSLS 120

Query: 162  SGEGLGIAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL 221
            SG+GLG AENAS QPPT EKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL
Sbjct: 121  SGQGLGTAENASFQPPTPEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL 180

Query: 222  ERVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDG 281
            ERVTTA+QIQSLSQL MEKFEDEVWKIFGKKY+TNEERR++VDWDRRKTHIYHC+VALDG
Sbjct: 181  ERVTTAEQIQSLSQLAMEKFEDEVWKIFGKKYITNEERRMYVDWDRRKTHIYHCYVALDG 240

Query: 282  SCSFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILL 341
            S  FKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDT L NH+GGSFYAY+KIARDGILL
Sbjct: 241  SYRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTHLPNHTGGSFYAYNKIARDGILL 300

Query: 342  GLRRYRFFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLF 401
            GLRRYRFFVFKDGGKE KKKNPTTSAVKCYFVRMESDAY+DKIEPYKLSNRTVFEARSLF
Sbjct: 301  GLRRYRFFVFKDGGKEEKKKNPTTSAVKCYFVRMESDAYVDKIEPYKLSNRTVFEARSLF 360

Query: 402  MHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIH 461
            MHAHMVSSIASYMARFSLILSKTI LKIDLSTV VQRIGDIPCKDIYGNVIYRDGKPLIH
Sbjct: 361  MHAHMVSSIASYMARFSLILSKTIKLKIDLSTVKVQRIGDIPCKDIYGNVIYRDGKPLIH 420

Query: 462  TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLI 521
            TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTL LTLPGLELREPPLLI
Sbjct: 421  TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLPLTLPGLELREPPLLI 480

Query: 522  QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPK 581
            QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDL NFETENSLELVGTSNPPK
Sbjct: 481  QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLVNFETENSLELVGTSNPPK 540

Query: 582  RTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR 641
            RTFLSRNLIALLNYGGVPREYFM ILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR
Sbjct: 541  RTFLSRNLIALLNYGGVPREYFMTILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR 600

Query: 642  MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVIL 701
            MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLH+PECYYLMGTVDPT TLES EVCVIL
Sbjct: 601  MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHMPECYYLMGTVDPTCTLESGEVCVIL 660

Query: 702  ENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAG 761
            ENGQINGKVLVYRNPGLHFGDIHVLTAKYVE+LVPVVGNAKYAIFFSSKGPRSV DEIAG
Sbjct: 661  ENGQINGKVLVYRNPGLHFGDIHVLTAKYVEELVPVVGNAKYAIFFSSKGPRSVADEIAG 720

Query: 762  GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFLSTR 821
            GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTN+KPKEFS EELENELFKLFLSTR
Sbjct: 721  GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNRKPKEFSVEELENELFKLFLSTR 780

Query: 822  FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKG-RKI 881
            FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKIL LINIYYDALDAPKKG +KI
Sbjct: 781  FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILQLINIYYDALDAPKKGGKKI 840

Query: 882  EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY 941
            EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY
Sbjct: 841  EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY 900

Query: 942  IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQ 1001
            IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSN+DVYQ
Sbjct: 901  IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNDDVYQ 960

Query: 1002 EALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFNLYAIKHSERSFLHCLPSVMREIFS 1056
            EALAIYQVTYDHAMS SVRNC FAWKVAGSALF LYAIKHSERSFL CLPSVMREIFS
Sbjct: 961  EALAIYQVTYDHAMSHSVRNCVFAWKVAGSALFKLYAIKHSERSFL-CLPSVMREIFS 1017

[Close]
BLAST of Chy2G034180 vs. NCBI nr
Match: XP_008450775.1 (PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Cucumis melo])

HSP 1 Score: 1901 bits (4925), Expect = 0.0
Identity = 965/1018 (94.79%), Postives = 981/1018 (96.37%), Query Frame = 0 

Query: 42   MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLWALASVGEVAALDVLHKISCST-VR 101
            MADHFLEVSLPPSVE FLL IC+LHDQPLPD EV WALASVGEVAALD LHKISCS+ VR
Sbjct: 1    MADHFLEVSLPPSVEHFLLQICELHDQPLPDAEVRWALASVGEVAALDALHKISCSSPVR 60

Query: 102  NLNGFILHLVRKDSCASPQKKMVRVSPHQSPSSC-PVSQLQSPSTCSVSLHQSPSTFSVC 161
            NL+GFILH+VRKDSCASPQ KMVRVSPHQSPSSC  VSQLQSPSTCSVSLHQS STFSV 
Sbjct: 61   NLSGFILHMVRKDSCASPQNKMVRVSPHQSPSSCCRVSQLQSPSTCSVSLHQSLSTFSVS 120

Query: 162  SGEGLGIAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL 221
            SG+GLG AENAS QPPT EKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL
Sbjct: 121  SGQGLGTAENASFQPPTPEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL 180

Query: 222  ERVTTADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDG 281
            ERVTTA+QIQSLSQL MEKFEDEVWKIFGKKY+TNEERRV+VDWDRRKTHIYHC+VALDG
Sbjct: 181  ERVTTAEQIQSLSQLAMEKFEDEVWKIFGKKYITNEERRVYVDWDRRKTHIYHCYVALDG 240

Query: 282  SCSFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILL 341
            S  FKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDT L NH+GGSFY Y+KIARDGILL
Sbjct: 241  SYRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTHLPNHTGGSFYVYNKIARDGILL 300

Query: 342  GLRRYRFFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLF 401
            GLRRYRFFVFKDGGKE KKKNPTTSAVKCYFVRMESDAY+DKIEPYKLSNRTVFEARSLF
Sbjct: 301  GLRRYRFFVFKDGGKEEKKKNPTTSAVKCYFVRMESDAYVDKIEPYKLSNRTVFEARSLF 360

Query: 402  MHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGNVIYRDGKPLIH 461
            MHAHMVSSIASYMARFSLILSKTI LKIDLSTV VQRIGDIPCKDIYGNVIYRDGKPLIH
Sbjct: 361  MHAHMVSSIASYMARFSLILSKTIKLKIDLSTVKVQRIGDIPCKDIYGNVIYRDGKPLIH 420

Query: 462  TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLI 521
            TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTL LTLPGLELREPPLLI
Sbjct: 421  TDGTGFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLPLTLPGLELREPPLLI 480

Query: 522  QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPK 581
            QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDL NFETENSLELVGTSNPPK
Sbjct: 481  QFRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLVNFETENSLELVGTSNPPK 540

Query: 582  RTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR 641
            RTFLSRNLIALLNYGGVPREYFM ILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR
Sbjct: 541  RTFLSRNLIALLNYGGVPREYFMTILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVAR 600

Query: 642  MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVIL 701
            MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPT TLES EVCVIL
Sbjct: 601  MILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTCTLESGEVCVIL 660

Query: 702  ENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAG 761
            ENGQINGKVLVYRNPGLH GDIHVLTAKYVE+LVPVVGNAKYAIFFSSKGPRSV DEIAG
Sbjct: 661  ENGQINGKVLVYRNPGLHLGDIHVLTAKYVEELVPVVGNAKYAIFFSSKGPRSVADEIAG 720

Query: 762  GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSSEELENELFKLFLSTR 821
            GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTN+KPKEFS EELENELFKLFLSTR
Sbjct: 721  GDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNRKPKEFSVEELENELFKLFLSTR 780

Query: 822  FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKG-RKI 881
            FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKIL LINIYYDALDAPKKG +KI
Sbjct: 781  FQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILQLINIYYDALDAPKKGGKKI 840

Query: 882  EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY 941
            EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY
Sbjct: 841  EVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQEEVPNIEVQKLPCFEEEVPEY 900

Query: 942  IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQ 1001
            IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSN+DVYQ
Sbjct: 901  IFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNDDVYQ 960

Query: 1002 EALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFNLYAIKHSERSFLHCLPSVMREIFS 1056
            EALAIYQVTYDHAMS SVRNC FAWKVAGSALF LYAIKHSERSFL CLPSVMREIFS
Sbjct: 961  EALAIYQVTYDHAMSHSVRNCVFAWKVAGSALFKLYAIKHSERSFL-CLPSVMREIFS 1017

[Close]
BLAST of Chy2G034180 vs. TAIR 10
Match: AT2G19930.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 887.9 bits (2293), Expect = 8.1e-258
Identity = 457/874 (52.29%), Postives = 611/874 (69.91%), Query Frame = 0 

Query: 193  ISQFVALGELEFRKAFLLLSYIGGESLERVTTADQIQSLSQLTMEKFEDEVWKIFGKKYV 252
            I Q VALGELEF+K FLLLSYI G+ + +V TAD+I+    L M ++E  VW   G+ Y 
Sbjct: 128  IPQLVALGELEFKKVFLLLSYIPGQHVGQVITADEIRLWKDLPMVEYEAAVWDRLGRHYC 187

Query: 253  TNEERRVHVDWDRRKTHIYHCHVALDGSCSFK------GPFLNNTKTHLQRVLGDDNVLM 312
              ++RR+ + WD  KTH Y C+VA +GS +FK      GP L +T THL +VLGDDNVL 
Sbjct: 188  PQKDRRM-LQWDSGKTHYYQCNVAPNGSYTFKVLSALQGPLLEHTGTHLHKVLGDDNVLT 247

Query: 313  VKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYRFFVFKDGGKEGKKKNPTTSAV 372
            VKFA+ +  +  S +S   ++ Y  IA++GI++GLRRY+FFVFKDGGKE KKK+ +T  V
Sbjct: 248  VKFADVQKSS--STYSIDHYFTYKGIAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKV 307

Query: 373  KCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLK 432
            KCYF+R +S A+ D   PY L+ ++++EAR  FMH H   ++A+YMARFSLILSKT  L+
Sbjct: 308  KCYFIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLE 367

Query: 433  IDLSTVNVQRIGDIPCKDIYG-NVIYRDGKPLIHTDGTGFISEDLALECPMNVFKGQAKH 492
            +D++ +   +I DI C D  G +V+ ++ KP IH+DGTG+ISEDLA  CP+N+FKG+   
Sbjct: 368  VDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLR 427

Query: 493  DADLKRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLVNKQLPPRTI 552
                      E  Q    Q         +PPLLIQFR+FY+G AVKGTFL+NK+L PRT+
Sbjct: 428  S---------ESIQEACYQ---------DPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTV 487

Query: 553  QIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIALLNYGGVPREYFMNIL 612
            Q+R SMIKV  DP L NF T N+LE+V TSNPPKRT LS+NL+ALL+YGG+P E+F++IL
Sbjct: 488  QVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDIL 547

Query: 613  VDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKK 672
            ++ L++ + +F +KRAAL  ++N GEMDD   A+MIL GIPLDE +L+  LS+LLK EK 
Sbjct: 548  LNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVGIPLDEPHLKNYLSILLKTEKN 607

Query: 673  SLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILENGQINGKVLVYRNPGLHFGDIHVLT 732
             LK+G+L V E YYLMGTVDPT  L+ DEVCVILE+GQI+G+VLVYRNPGLHFGDIH+L 
Sbjct: 608  DLKAGKLPVTESYYLMGTVDPTGALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILK 667

Query: 733  AKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFDGDMYWVSRNSQLLEYFRPCEPW 792
            A YV+ L   VGN+K+A+FF  KGPRS+GDEIAGGDFDGDMY++SRN +LLE F+P EPW
Sbjct: 668  ATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPW 727

Query: 793  -RPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLG 852
               +P ++  + + P + S EELE ELF++FL+  F  S    +AAD+WL +MD+FL+LG
Sbjct: 728  VSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILG 787

Query: 853  EERKEERNRIRAKILLLINIYYDALDAPKKGRKIEVPKHLKAGTLPHFMERGKNSYVSTS 912
            ++R EE+  ++ K+L LI+IYYDALDAPKKG K+ +P  LK    PH+MER K  + STS
Sbjct: 788  DDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDK-KFQSTS 847

Query: 913  ILGQIFDTVNMY--QEEVPNIEVQKLPCFEEE-VPEYIFMKWKFLYELYRKDMVDAMQLD 972
            ILG IFD V     +E  P+ E+ KLPCFE+E V E+   K +  Y+ YR +M  AM+ D
Sbjct: 848  ILGLIFDFVKSQTTEEPSPSSEISKLPCFEDEPVSEFHMQKCRLWYDNYRTEMTQAMKTD 907

Query: 973  PDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQEALAIYQVTYDHAMSRSVRNCGF 1032
             D    +A   I++YK+  YGA   E S +S E++Y +ALA+Y++ YD+A+   V  C F
Sbjct: 908  KDE---SANEVIQRYKQEFYGAAGFEDSKKSLEELYPQALALYKIVYDYAIHAGVSKCRF 967

Query: 1033 AWKVAGSALFNLYAIKHSERSFLHCLPSVMREIF 1056
             WKVAG  L   Y  K  +   L C PSV++E++
Sbjct: 968  VWKVAGPVLCRFYLNKKMQEKCLVCAPSVLKELW 976

[Close]
BLAST of Chy2G034180 vs. TAIR 10
Match: AT2G19910.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 868.2 bits (2242), Expect = 6.7e-252
Identity = 492/1004 (49.00%), Postives = 644/1004 (64.14%), Query Frame = 0 

Query: 48   EVSLPPSVEQFLLHICKLHDQPLP-DTEVLWALASVGEVAALDVLHKI-SCSTVRNLNGF 107
            E++L  SVE  L  I + H+  LP   E    L+S+ E  AL+ L K+ +   ++ L+G 
Sbjct: 14   EIALLGSVETMLEKIYEKHNHRLPISVETRRKLSSISEELALETLRKVFNKPYLKTLDGL 73

Query: 108  ILHLVRKDSCASPQKKMVRVSPHQSPSSCPVSQLQSPSTCSVSLHQSPSTFSVCSGEGLG 167
            I++ V+           V  SP  SP   PV   ++P+  S    Q  S         L 
Sbjct: 74   IMYFVK-------GTVTVDGSPRLSPGESPVQSPRTPAKKSCRASQDVS---------LD 133

Query: 168  IAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESL-ERVTT 227
            +   +       E  GS          I   +ALGELEF+KAFLLLSYIGGESL E V +
Sbjct: 134  LETPSPKFMKREENGGS--------KYIPPLLALGELEFKKAFLLLSYIGGESLVEEVIS 193

Query: 228  ADQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGSCSFK 287
             DQI+    L M  +E  VW   G++Y + +ERR  ++ D   TH Y CHVA DGS  FK
Sbjct: 194  GDQIRKWKDLPMVSYEAAVWNRLGQRYCSPKERRRPLEGDSGMTHYYQCHVATDGSYKFK 253

Query: 288  GPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRY 347
            G  L NT THL +VLGDDNVL VKF  DK    +  +    +  Y  IA++GI++GLRRY
Sbjct: 254  GHLLENTGTHLHKVLGDDNVLTVKF--DKV-LGVETYCNDLYSTYKGIAKNGIMVGLRRY 313

Query: 348  RFFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHM 407
            RFFVFKDGGKE KKK+ +T  VKCYF+R +S A ID   PY  + +++ EAR  FMH + 
Sbjct: 314  RFFVFKDGGKEEKKKDVSTKGVKCYFIRTDSTASIDMQNPYIFAGKSMHEARMHFMHVNT 373

Query: 408  VSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYG-NVIYRDGKPLIHTDGT 467
            +SS+ +YM+RFSLILSKT  L++D++ +  ++I DI C D    +V+ ++GKP IH+DGT
Sbjct: 374  LSSLPNYMSRFSLILSKTKTLEVDMTGITFEQIDDIHCHDQDDKDVLDKNGKPCIHSDGT 433

Query: 468  GFISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRL 527
            G+ISEDLA  CP+N+FKG++    ++         Q+K L     G   +EPPLLIQFR+
Sbjct: 434  GYISEDLARMCPVNIFKGKSMRSNNI---------QSKNLNFEGQGPCGQEPPLLIQFRI 493

Query: 528  FYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFL 587
            FYNG AVKGTFL NK+LPPRT+Q+R SMIKV  D  L N  T NSLE+V TSNPP++  L
Sbjct: 494  FYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARL 553

Query: 588  SRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILA 647
            SRNL+ALL+YGGVP ++F+NIL + L++ + +F S+RAA + +IN G  DD   A MIL 
Sbjct: 554  SRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG--DDQYTADMILV 613

Query: 648  GIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILENGQ 707
            GIPLDE YL+ RLS LLK E+ +LK+GR  + E YY+MGTVDPT  L+ +E+CVIL +GQ
Sbjct: 614  GIPLDEPYLKDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENEICVILHSGQ 673

Query: 708  INGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFD 767
            I+G VLVYRNPGLHFGDIHVL A YV+ L   VGNAK+A+FF  KGPRS+GDEIAGGDFD
Sbjct: 674  ISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFD 733

Query: 768  GDMYWVSRNSQLLEYFRPCEPW-RPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQP 827
            GDMY++SRN +LLE+F+P EPW   S  +++   +KP E S EELE ELFK+FL  RF  
Sbjct: 734  GDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKPSELSEEELEEELFKMFLKARFCK 793

Query: 828  SYAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKGRKIEVPK 887
                 +AAD WL +MD FL LG+E  +E+   +  IL LI+IYYDALDAPKKG K+++P 
Sbjct: 794  RDVIGMAADCWLGIMDPFLTLGDESAKEKYERKKNILKLIDIYYDALDAPKKGAKVDLPP 853

Query: 888  HLKAGTLPHFMERG-KNSYVSTSILGQIFDTVNMYQ-EEVPNIEVQKLPCFEEE-VPEYI 947
             L+    PH+MER  K  + STSILG IFDTV+ +  EE P  E+ KL  FE+E VP+  
Sbjct: 854  DLEIKNFPHYMERDPKRDFRSTSILGLIFDTVDSHNAEEPPPSEISKLWYFEDEPVPKSH 913

Query: 948  FMKWKFLYELYRKDMVDA-MQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQ 1007
              K+   YE YR +M  A M+ D   +N      I++YK+  YGA   E S +S E++Y 
Sbjct: 914  MDKFTSWYENYRSEMSQAMMETDKVKRNQLTNEVIQRYKQDFYGAAGFEDSNKSLEELYP 973

Query: 1008 EALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFNLYAIKHSERS 1043
            +ALA+Y V YD+A+   V  C FAW VAG  L   Y  K  ++S
Sbjct: 974  QALALYNVVYDYAIQEGVAKCTFAWNVAGPVLCKFYLKKTKDKS 979

[Close]
BLAST of Chy2G034180 vs. TAIR 10
Match: AT2G19920.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 784.6 bits (2025), Expect = 9.7e-227
Identity = 445/966 (46.07%), Postives = 609/966 (63.04%), Query Frame = 0 

Query: 48   EVSLPPSVEQFLLHICKLHDQPLP-DTEVLWALASVGEVAALDVLHKI-SCSTVRNLNGF 107
            E++L  SVE  L  +   H+   P   E    L+S+ E  AL+ L K+ +   V+ L+G 
Sbjct: 19   EIALLGSVETMLEKVYGKHNHHPPIKVETRRRLSSISEELALETLRKVLNMPNVKTLDGI 78

Query: 108  ILHLVRKDSCASPQKKMVRVSPHQSPSSCPVSQLQSPSTCSVSLHQSPSTFSVCSGEGLG 167
            I++ +            V  SP       PV   ++P   S    Q+  +          
Sbjct: 79   IIYFLN-------DAVTVDGSPRLWSGESPVQFPRTPGKKSCRASQAEVSLD-------- 138

Query: 168  IAENASLQPPTAEKSGSFSSSVSDRARISQFVALGELEFRKAFLLLSYIGGESLERVTTA 227
              E+ S +    +++G       +   IS  +ALGELEF+KAFLLL+Y+GG+SL  V + 
Sbjct: 139  -REDPSPKFLRGDENG-------ESKHISLLLALGELEFKKAFLLLTYLGGKSLGEVISG 198

Query: 228  DQIQSLSQLTMEKFEDEVWKIFGKKYVTNEERRVHVDWDRRKTHIYHCHVALDGSCSFKG 287
            D+I+    L M  +E  VW   G+      E R+ ++ D  KTH Y CHVA DGS   KG
Sbjct: 199  DEIRQWKDLPMVAYERAVWFKLGQ-----NEERMQLESDSGKTHYYQCHVAPDGSYRLKG 258

Query: 288  PFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYR 347
             FL NT THL +VLGDDNVL V+F +   +   S +    +  Y +IA++GI++GLRRY+
Sbjct: 259  YFLENTGTHLHKVLGDDNVLTVRFDQLPKE---STYCDNPYSKYKEIAKNGIMVGLRRYQ 318

Query: 348  FFVFKDGGKEGKKKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMV 407
            FFVFKDGGK  KKK  +T  VKCYF+R  S A  D   PY LS  ++ EAR  FMH H +
Sbjct: 319  FFVFKDGGKAEKKKRNSTKQVKCYFIRTGSTASSDMENPYILSGMSIHEARMHFMHVHTL 378

Query: 408  SSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCKDIYGN-VIYRDGKPLIHTDGTG 467
             S A+YMARFSLILSKT  L++D++ + V +I DI C D   N V+ ++GKP IH+DGTG
Sbjct: 379  PSPANYMARFSLILSKTKKLEVDMTEITVMQIDDIHCHDQSNNDVLDKNGKPRIHSDGTG 438

Query: 468  FISEDLALECPMNVFKGQAKHDADLKRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLF 527
            +ISEDLA  CP+N+FKG++    +++                  G  ++EPPLLIQ R+F
Sbjct: 439  YISEDLARMCPLNIFKGKSMRSNNIQ------------------GTCVQEPPLLIQIRMF 498

Query: 528  YNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLS 587
             +G AVKG FL+NK LPP+T+Q+R SMIKV  D +L NF T NSLE+V TSNPPKR  LS
Sbjct: 499  NDGSAVKGIFLLNKNLPPQTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPPKRAKLS 558

Query: 588  RNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAG 647
            +NL+ALL+YGGVP ++F++IL++ L+  + +F   RAA + +++ G MDD    +MI+AG
Sbjct: 559  KNLVALLSYGGVPNDFFLDILLNTLEKKKTIFFKVRAAGKAALHYGNMDDKNALQMIMAG 618

Query: 648  IPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESDEVCVILENGQI 707
            IPLDE YL++ LS LLK EK  LK+G+L + E YYLMGTVDPT  L+ DEV  + ++   
Sbjct: 619  IPLDEPYLKHYLSKLLKLEKDDLKAGKLPIDESYYLMGTVDPTGELKEDEVSGLAKSQD- 678

Query: 708  NGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVGDEIAGGDFDG 767
               VLVYRNPGLHFGDIH+L A YV+ L   VGN+KY +FF  KGPRS+GDEIAGGDFDG
Sbjct: 679  ---VLVYRNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQKGPRSLGDEIAGGDFDG 738

Query: 768  DMYWVSRNSQLLEYFRPCEPW-RPSPSTEVVTNKKPKEFSSEELENELFKLFLSTRFQPS 827
            DMY++SRN +LLE+++P EPW   SP +++ T ++P E S E+LE ELFK+FL T F PS
Sbjct: 739  DMYFISRNPKLLEHYKPSEPWVSSSPRSKIYTGRQPSELSPEQLEEELFKIFLKTGFSPS 798

Query: 828  YAKSVAADNWLALMDQFLMLGEERKEERNRIRAKILLLINIYYDALDAPKKGRKIEVPKH 887
                 AAD+WLA+MD+FL LG+E  +E+  ++ K+L L +IYYDA+DAPK G ++ +P  
Sbjct: 799  SVIGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKLTDIYYDAIDAPKTGTEVNLPLD 858

Query: 888  LKAGTLPHFMERGKNSYVSTSILGQIFDTVNMYQ-EEVPNIEVQKLPCFEEE-VPEYIFM 947
            +K    PH+MER K ++ STSILG IFDTV+ +  E+     + KL CFE+E V E+   
Sbjct: 859  VKVDLFPHYMERNK-TFKSTSILGLIFDTVDFHNAEDTTPSGISKLQCFEDEPVSEFDME 918

Query: 948  KWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEDVYQEAL 1007
            K K  ++ YRK+M  AM  D D    +    I+KYK+  Y A   + S +  E++Y +AL
Sbjct: 919  KCKLWHKDYRKEMCQAMNSDDDD---SCNEVIQKYKQEFYSAAGFKESKKILEELYPKAL 927

[Close]
BLAST of Chy2G034180 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-24
Identity = 117/417 (28.06%), Postives = 183/417 (43.88%), Query Frame = 0 

Query: 521 FRLFYNGLAVKGTFLVNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKR 580
           F++ Y G   KG   V++    R + +RDSM+K         F++ N +  V        
Sbjct: 581 FQIRYGG--YKGVIAVDRS-SFRKLSLRDSMLK---------FDSNNRMLNVTRWTESMP 640

Query: 581 TFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSIN-NGEMDDFLVAR 640
            FL+R +I LL+  G+    F  +    L  +  +   + AAL V    +GE    L+ +
Sbjct: 641 CFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVK 700

Query: 641 MILAG-IPLDESYLQYRLSVLLKEEKKSLKSG-RLHVPECYYLMGTVDPTFTLESDEVCV 700
           M+L G  P  E YL   L V  + +   LKS  R+ VP+   L+G +D    LE  +V V
Sbjct: 701 MLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYV 760

Query: 701 IL--------------------ENGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVG 760
            +                    E   + GKV+V +NP LH GDI VL A Y E      G
Sbjct: 761 RVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIY-EVHFEEKG 820

Query: 761 NAKYAIFFSSKGPRSVGDEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNK 820
                I F  KG R   +E +GGD DGD ++VS + +++       P    P  +     
Sbjct: 821 YLD-CIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKII-------PSEMDPPMD-YAGS 880

Query: 821 KPKEFSSEELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNRIRAK 880
           +P+    +    E+ K F+      +          L ++    ++  +R  E+ R + K
Sbjct: 881 RPRLMDHDVTLEEIHKFFVDYMISDT----------LGVISTAHLVHADRDPEKARSQ-K 940

Query: 881 ILLLINIYYDALDAPKKGRKIEVPKHLKAGTLPHFMER-GKNSYVSTSILGQIFDTV 914
            L L N++  A+D  K G   E+P  LK    P F+ER  K +Y+S S+ G+++  V
Sbjct: 941 CLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAV 964

[Close]
BLAST of Chy2G034180 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 94.4 bits (233), Expect = 6.0e-19
Identity = 105/401 (26.18%), Postives = 167/401 (41.65%), Query Frame = 0 

Query: 582  FLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMI 641
            FL+R +I LL+  GVP E F ++    L  +  +      A  V   +        A M+
Sbjct: 665  FLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGNTAAIML 724

Query: 642  LAGI-PLDESYLQYRLSVLLKEEKKSLK-SGRLHVPECYYLMGTVDPTFTLESDEVCVI- 701
             AG  P  E +L+  LS +   +   L+   R+ V    +LMG +D    LE  + C I 
Sbjct: 725  SAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQ-CFIQ 784

Query: 702  -----LEN----------------GQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVG 761
                 +EN                  + G V + +NP LH GD+ +L A  V+  VP + 
Sbjct: 785  VSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEA--VD--VPQLH 844

Query: 762  NAKYAIFFSSKGPRSVGDEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTE----- 821
            +    + F  KG R   +E +G D DGD+Y+V+ + +L+   R   P     + E     
Sbjct: 845  HMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLG 904

Query: 822  -VVTNKKPKEFSSEELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEER 881
              V ++   +F +  L NE      +       A  V AD                + E 
Sbjct: 905  RAVNHQDIIDFFARNLANEQLGTICN-------AHVVHAD----------------RSEY 964

Query: 882  NRIRAKILLLINIYYDALDAPKKGRKIEVPKHLKAGTLPHFM-ERGKNSYVSTSILGQIF 938
              +  + LLL  +   A+D PK G+ + +P HLK    P FM +    +Y S  ILG+++
Sbjct: 965  GAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLY 1024

The following BLAST results are available for this feature:
BLAST of Chy2G034180 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O821881.1e-25652.29Probable RNA-dependent RNA polymerase 5 OS=Arabidopsis thaliana OX=3702 GN=RDR5 ... [more]
O821909.4e-25149.00Probable RNA-dependent RNA polymerase 3 OS=Arabidopsis thaliana OX=3702 GN=RDR3 ... [more]
O821891.4e-22546.07Probable RNA-dependent RNA polymerase 4 OS=Arabidopsis thaliana OX=3702 GN=RDR4 ... [more]
Q5QMN52.7e-22147.43Probable RNA-dependent RNA polymerase 3 OS=Oryza sativa subsp. japonica OX=39947... [more]
Q5QMN49.8e-21646.01Probable RNA-dependent RNA polymerase 4 OS=Oryza sativa subsp. japonica OX=39947... [more]
BLAST of Chy2G034180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYP80.0e+0096.80RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_1G574860 PE=3 SV=... [more]
A0A5D3CF420.0e+0094.70RNA-dependent RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3BPE50.0e+0094.79RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103492255 PE=3 SV=1[more]
A0A1S4DYX60.0e+0092.26RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103492255 PE=3 SV=1[more]
A0A6J1CU260.0e+0085.04RNA-dependent RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111014566 PE=3... [more]
BLAST of Chy2G034180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011659949.10.096.80probable RNA-dependent RNA polymerase 5 isoform X1 [Cucumis sativus][more]
XP_011659951.10.096.96probable RNA-dependent RNA polymerase 5 isoform X3 [Cucumis sativus][more]
XP_031744299.10.093.30probable RNA-dependent RNA polymerase 5 isoform X2 [Cucumis sativus][more]
TYK10155.10.094.70putative RNA-dependent RNA polymerase 5 isoform X2 [Cucumis melo var. makuwa][more]
XP_008450775.10.094.79PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Cucumis melo][more]
BLAST of Chy2G034180 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G19930.18.1e-25852.29RNA-dependent RNA polymerase family protein [more]
AT2G19910.16.7e-25249.00RNA-dependent RNA polymerase family protein [more]
AT2G19920.19.7e-22746.07RNA-dependent RNA polymerase family protein [more]
AT4G11130.11.3e-2428.06RNA-dependent RNA polymerase 2 [more]
AT3G49500.16.0e-1926.18RNA-dependent RNA polymerase 6 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 281..913
e-value: 3.0E-107
score: 359.7
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 48..1055
NoneNo IPR availablePANTHERPTHR23079:SF13RNA-DEPENDENT RNA POLYMERASE 3-RELATEDcoord: 48..1055

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G034180.1Chy2G034180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070919 production of siRNA involved in gene silencing by small RNA
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0001172 transcription, RNA-templated
cellular_component GO:0031380 nuclear RNA-directed RNA polymerase complex
molecular_function GO:0003723 RNA binding
molecular_function GO:0003968 RNA-directed 5'-3' RNA polymerase activity