Chy2G033990 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G033990
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Sec-independent protein translocase protein TATA
Location	chrH02: 8012360 .. 8015557 (+)
RNA-Seq Expression	Chy2G033990
Synteny	Chy2G033990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATTTCATCTCCAACTTTATCCTTTACTTCTTCCATTCCAAAGCTTCCTCCATCTCTTTCACCTTCACTTTCCTCTTCTAAATCCGCCTTCTTCGCCAACAATGCCACCACCAGTTTCTTCACCTACGGCGACCATAACCATTCTTCGCTACTGCGTTTGACCAGCTTCAGAACCACCACTAAAACAACTCATAAAAGTTTCACTTGTAATGCTTTGTTTGGTCTTGGCGTGCCTGAACTTGTTGTAATCGCTGGTGTTGCAGCTTTGGTTTTTGGACCTAAGAAGTTGCCTGAAGTTGGGAAGAGTATTGGGAAAACAGTCAAAAGCTTCCAACAGGTATGTTTGTAGTTTTAGTTGATTGGGTCAGATTGAATGCCCTGGAATTGTTTAATTCTCTGGGATTTGAAATGGGGATCCGGGGAAATGAAAAAAAAAATTATTTTATTGAATTTAGATTGTGTGCACGATGTTTGAGTTTCATTTGGCTTTTCCGCTAATACAGAAAAGTAATTGATAATTGTTGTTTTGGGTTTATTTTGACTAACTAGTTAGAAAAAATAACCCTTCTTTTCGTGGCTACATGAGCAGCAACAATCTTGAATTAGTTGAATTGTCGATTTATTAGCTTTGTCCAAAGTATTATTGAAAGTATTCCCTAAGATTGAACTGTCTGAATTTATTTTTCTGGCTGGGCGACTGTGTTAGAGAATGGACGTTATTAAAGTTCAAATTTTAGTATTTTACGTCATCCTGATCCTGATAGGTAAAATCTTCCAGTTTTGTGAGTTCTGTTCTTTGTCCTTGATTCTTTGTGGTAGTTTTCTTCAACTAATGCAATCTGAAAGTACTTTTGTTGCTTGAAATTTTGCGAAGTTTTGGATGTTTTGCATTTGGATCATGAATAATCCGATCTATGTCATCACTCATGTTAGACTAAATGGTATATGTAATGTAATACTTCCAGGATCCTTACTGGATATCTTTCTGTTGAATATTGTTTCTTATGTTTTTACGAATGCTTTTCAATTCATTTATTCTTAGTAGGTGGTGTTTTTAATGGATGTGAAATCCTGTTTCCTTTTCCTTTGTCCTTAAACTACGCGGGAGTCTTTTGCTGATATTTCCAGAGTGGAAAAATGGGATATGCATTCTCCAATTAAGAGACGTCAACAAACTCTTAATCTTGAGAAAATTCCTTTTATACCTTCTCCTTTTCTTTAGTACTGCAAATGGTAGCAGAGATCTTCATGGGGCGGGGCCCCATCCCTGTCCCCAGGGAATAGATGCTTTGGATGGAATGTCAAAAAGTCATGATTGTAGTCCCTGCGTCTTCTCATTGATGTCGTTCGAGGGCTTCTCCCTCCAAACATAGAACTGTAAAGTCGAGCTTATTCACGACAAAATATCTCTCTATTTGATGTAGCTACCCGTATGGGTAATGAGTCTTCTCGTCTTCCCCCTCAAAGATTAGTACCTCAGGTTTCCTCAATTGTATATTGCATAACAGCACCTCACAAGTGCTAGGAGCGTTCTCTGTTTCATTGGTATGTTCTTTCTCTCTCGTTGCACTTTTAGCCAGTCGTTTGCCTCTATTTGTGTGTGTCCGTTCAAGGGAGCCCAAACTACCTCCATCTCTGGTTTCCTCCTTCCTTCTAGGCTACGCCTTTTATCCTCACATTATTACTGTTTCAACGTCTAGCCTAACTCTTCCTGGATTCAGGTGAATTCATTTGCAATCGTGGCTTTGGCTTCTACTCCATGTTTGATTTGAATAAACTTTTGATCCATCTTTTTCTATACTGAATTCTGGAAGCTGAAATAAAAATTTCGATTAACTGAAGCAGCAATGTGTATAATTCAAACGAACTAATTGAGTTTGTTCAAGCAGTTTCCTCGAATCTTCGCAATCTACCTAGGCCTGGTAGCATGTGTGGTACTTACCACATGAACATTAACGTTCTTTGATTTTGCTATTGTTATGGTATGATTTCCCACCGCATTCAGTACAATTTAATCTCTTTGTTAATTTCCATTTTCTTTGATGAGAAATCAAGCTGGATGGAAATATGAAAAGAATACTGAAAAAGAAAAAAGAAAAGAAGTACATAAAAAAGACAACCCAACTAACAAAAGAGGAGCATCAAATTCAAAGTATATAGAATGGGCTTGAGCCCGACTAAAGGTTATTGTGAATTTCATTAATTCATCTATGTTTAGGAGTGACAAACTTTTTTATCTTTCTAATTGAACAATGTTTGGGGCCTTGGGGCTGACCTCTCAATCGAGTGTATATATCTAAACTAGTTGATAAGTTGGCGACGACCACTTTTCTCATAGAAAAAAATACCTCCTACATAATATTATCATGTTTGGGAGCATGTAAAAATGTTCTTAGAAAAAAGCGAAGCACCTTAAAGTAGGTTGTTATAGAGTGCTTTTAGCTAAACGGGTGAATGCGAAGTACTTTTAAGAATGTAGAACAAAACATTTAACTGATTTATTTTAAACAATTTTAAAGTAATGTAGCTAAAAGTACTTTAAAAGAACTCTGAAACATAACTTGAGAGTCTAAGACTGTCACATTTGTTAGTTTTGAGTTAGAAAAAGTTATTGTCGAATGAGGATACAGTAACCTTCAGTTCATACTTCATAGTTCGTTATAGATAAGTAATTAATGTATGGGTCTATTTCTAAGAAATCAACAACTCCCTCAATTATACACCCTTAAAACAGCTACCTAGTATTTTGTTGATGAAGCATGTTTTCAGTCTTCTTTCATGAATAGAGTCAAGTATGAGGAAAACTTCAATTGCTCAATTTGTTAAAGGAATCAGCAAAGCGACGCTTCATTAATTAGCTGCTTTTCAATGATGGTAGTTGGAGGAATAATGTTGCTAATATTATTGCAGGCAGCCAAGGAGTTCGAGTCCGAGCTGAAGAAAGAACCTGAGCCAACTGAAGAGACTTCAGTAGAAAAGCCTACATCAACGGAAGCAGAGGAGAGACAAGATTTGAAGGTATCAAACCAAAAAGAGACTGTATGAAGCGGTAGGTAGTCCATCATTTCCACATCTACATTTATCATTGTGTTTTATGTATTATGAGAATCAGTTACTGGAATCTGAAGATCACTTAATGAAGAAAATTAGTTTTCCAGTGCTGGACTCTGATGGATACCATAATCCACTCTAA

mRNA sequence

ATGGTGATTTCATCTCCAACTTTATCCTTTACTTCTTCCATTCCAAAGCTTCCTCCATCTCTTTCACCTTCACTTTCCTCTTCTAAATCCGCCTTCTTCGCCAACAATGCCACCACCAGTTTCTTCACCTACGGCGACCATAACCATTCTTCGCTACTGCGTTTGACCAGCTTCAGAACCACCACTAAAACAACTCATAAAAGTTTCACTTGTAATGCTTTGTTTGGTCTTGGCGTGCCTGAACTTGTTGTAATCGCTGGTGTTGCAGCTTTGGTTTTTGGACCTAAGAAGTTGCCTGAAGTTGGGAAGAGTATTGGGAAAACAGTCAAAAGCTTCCAACAGGCAGCCAAGGAGTTCGAGTCCGAGCTGAAGAAAGAACCTGAGCCAACTGAAGAGACTTCAGTAGAAAAGCCTACATCAACGGAAGCAGAGGAGAGACAAGATTTGAAGTTACTGGAATCTGAAGATCACTTAATGAAGAAAATTAGTTTTCCAGTGCTGGACTCTGATGGATACCATAATCCACTCTAA

Coding sequence (CDS)

ATGGTGATTTCATCTCCAACTTTATCCTTTACTTCTTCCATTCCAAAGCTTCCTCCATCTCTTTCACCTTCACTTTCCTCTTCTAAATCCGCCTTCTTCGCCAACAATGCCACCACCAGTTTCTTCACCTACGGCGACCATAACCATTCTTCGCTACTGCGTTTGACCAGCTTCAGAACCACCACTAAAACAACTCATAAAAGTTTCACTTGTAATGCTTTGTTTGGTCTTGGCGTGCCTGAACTTGTTGTAATCGCTGGTGTTGCAGCTTTGGTTTTTGGACCTAAGAAGTTGCCTGAAGTTGGGAAGAGTATTGGGAAAACAGTCAAAAGCTTCCAACAGGCAGCCAAGGAGTTCGAGTCCGAGCTGAAGAAAGAACCTGAGCCAACTGAAGAGACTTCAGTAGAAAAGCCTACATCAACGGAAGCAGAGGAGAGACAAGATTTGAAGTTACTGGAATCTGAAGATCACTTAATGAAGAAAATTAGTTTTCCAGTGCTGGACTCTGATGGATACCATAATCCACTCTAA

Protein sequence

MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRTTTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEKPTSTEAEERQDLKLLESEDHLMKKISFPVLDSDGYHNPL*

Homology

[Close]

BLAST of Chy2G033990 vs. ExPASy Swiss-Prot
Match: Q9XH46 (Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum OX=3888 GN=TATA PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.4e-28
Identity = 87/152 (57.24%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 7   TLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRTTTKTTH 66
           TLS +SS   +P  L  S   S  +F ++N+ T          SSLL L   R  T+TT 
Sbjct: 4   TLSISSS-SVIPTRLPNSSCYSNLSFLSSNSNT----------SSLL-LKKARIKTRTT- 63

Query: 67  KSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 126
           K FTCNA FGLGVPELVVIAGVAALVFGPKKLPEVG+SIG+TVKSFQQAAKEFE+ELKKE
Sbjct: 64  KGFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKE 123

Query: 127 PEPTEETSVEKPTSTEAEERQDLKLLESEDHL 159
           P PTEE SV        +E+Q++K+  ++D++
Sbjct: 124 PNPTEEISV-----ASEQEKQEIKVSSTKDNV 137

[Close]

BLAST of Chy2G033990 vs. ExPASy Swiss-Prot
Match: Q9LKU2 (Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATA PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-27
Identity = 77/130 (59.23%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 18  PPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRTTTKTTHKSFTCNALFGL 77
           PP   P LSSS+S+FF+N      FT     ++  L     R   + T K  TCNALFGL
Sbjct: 12  PPVSLPLLSSSRSSFFSN-----CFTVTTRPNTRSLVAIGRRIRQEPTRKPLTCNALFGL 71

Query: 78  GVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEK 137
           GVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQAAKEFESELK EPE +   S + 
Sbjct: 72  GVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQV 131

Query: 138 PTSTEAEERQ 148
            TS + EE++
Sbjct: 132 ATSNKEEEKK 136

[Close]

BLAST of Chy2G033990 vs. ExPASy Swiss-Prot
Match: Q9XFJ8 (Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays OX=4577 GN=TATA PE=1 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 9.8e-20
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 71  CNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP-EP 130
           C  LFGLGVPEL VIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKEP E 
Sbjct: 82  CKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKEPGEG 141

Query: 131 TEETSVEKPTSTEAEERQDLKLLESED 157
            ++     PT+    E + L+   S++
Sbjct: 142 GDQPPPATPTAVSGGEEKGLEASSSKE 168

[Close]

BLAST of Chy2G033990 vs. ExPASy Swiss-Prot
Match: Q75GK3 (Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATA PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 71  CNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE---- 130
           C  LFGLGVPELVVIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKE    
Sbjct: 81  CKCLFGLGVPELVVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKESDDG 140

Query: 131 ---PEPTEETSVEKPTSTEAEERQDLKLLESED 157
              P P  ET+V     ++  E ++L+   S++
Sbjct: 141 GDQPPPPTETAV-----SDGGEEKELEASSSKE 168

[Close]

BLAST of Chy2G033990 vs. ExPASy Swiss-Prot
Match: Q31RR1 (Sec-independent protein translocase protein TatA OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=tatA PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.6e-12
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 75  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPE------ 134
           FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E +      
Sbjct: 4   FGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATP 63

Query: 135 -------------PTEETSVEKPTSTE 143
                        PTE  +VEK T T+
Sbjct: 64  AEATVEPPVLDSAPTEAVTVEKQTETQ 90

[Close]

BLAST of Chy2G033990 vs. ExPASy TrEMBL
Match: A0A5D3CIV6 (Sec-independent protein translocase protein TATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003240 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.5e-82
Identity = 169/176 (96.02%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60
           MVIS+PTLSFTSSIPKLPPSLSPS SSSKSAFFANNAT SFFT GDHNHSSLLRLTSFRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHK  TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKLLESEDHLMKKISFPVLDSDGYHNPL 177
           SELKKEPEPTEETSVEKPTSTEAE+RQDLKLLESEDHLMKKISFPVLDSDGYHNPL
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKLLESEDHLMKKISFPVLDSDGYHNPL 176

[Close]

BLAST of Chy2G033990 vs. ExPASy TrEMBL
Match: A0A0A0LWL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573670 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.1e-69
Identity = 148/156 (94.87%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60
           MVISSPTLSFTSSIPKLPPSLSPS SSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT
Sbjct: 1   MVISSPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHK FTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKLLESED 157
           SELKKEPEPTEETSVEKPTSTEAEERQDLK+   ++
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKVSNQKE 156

[Close]

BLAST of Chy2G033990 vs. ExPASy TrEMBL
Match: A0A1S3BPB0 (sec-independent protein translocase protein TATA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492233 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.2e-66
Identity = 143/156 (91.67%), Postives = 148/156 (94.87%), Query Frame = 0


Query: 1   MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60
           MVIS+PTLSFTSSIPKLPPSLSPS SSSKSAFFANNAT SFFT GDHNHSSLLRLTSFRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHK  TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKLLESED 157
           SELKKEPEPTEETSVEKPTSTEAE+RQDLK+   ++
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKE 156

[Close]

BLAST of Chy2G033990 vs. ExPASy TrEMBL
Match: A0A6J1HYU6 (sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468153 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 7.2e-50
Identity = 120/150 (80.00%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 1   MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60
           MVISS TLSFTSSIP+L PS SP LSSSKS+FFANNAT + F  GDH+HSSLLR T  R 
Sbjct: 1   MVISSATLSFTSSIPRL-PSFSPPLSSSKSSFFANNATANSFNKGDHSHSSLLRTTRSRK 60

Query: 61  TTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           T    HK  TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLK 151
           SELKKEPE   ET+VEKPTS + EE+QDLK
Sbjct: 121 SELKKEPESIGETAVEKPTSVDDEEKQDLK 149

[Close]

BLAST of Chy2G033990 vs. ExPASy TrEMBL
Match: A0A6J1EWP2 (sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439076 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.2e-48
Identity = 117/156 (75.00%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 1   MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60
           MVISS TLSFTSSIP+L PS SP  SSSKS+FFANNAT + F  GDH+HS LLR T  R 
Sbjct: 1   MVISSATLSFTSSIPRL-PSFSPPFSSSKSSFFANNATANSFNKGDHSHSLLLRTTRSRK 60

Query: 61  TTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           T    HK  TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKLLESED 157
           SELKKEPE   ET+VEKP S + EE+QDLK+   ++
Sbjct: 121 SELKKEPESIGETAVEKPASIDDEEKQDLKVSNQKE 155

[Close]

BLAST of Chy2G033990 vs. NCBI nr
Match: TYK10179.1 (sec-independent protein translocase protein TATA [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (804), Expect = 3.09e-107
Identity = 169/176 (96.02%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60
           MVIS+PTLSFTSSIPKLPPSLSPS SSSKSAFFANNAT SFFT GDHNHSSLLRLTSFRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHK  TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKLLESEDHLMKKISFPVLDSDGYHNPL 176
           SELKKEPEPTEETSVEKPTSTEAE+RQDLKLLESEDHLMKKISFPVLDSDGYHNPL
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKLLESEDHLMKKISFPVLDSDGYHNPL 176

[Close]

BLAST of Chy2G033990 vs. NCBI nr
Match: XP_004135654.1 (sec-independent protein translocase protein TATA, chloroplastic [Cucumis sativus] >KGN66148.1 hypothetical protein Csa_007404 [Cucumis sativus])

HSP 1 Score: 272 bits (695), Expect = 6.82e-91
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60
           MVISSPTLSFTSSIPKLPPSLSPS SSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT
Sbjct: 1   MVISSPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHK FTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKL 151
           SELKKEPEPTEETSVEKPTSTEAEERQDLK+
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKV 151

[Close]

BLAST of Chy2G033990 vs. NCBI nr
Match: XP_008450744.1 (PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Cucumis melo] >XP_008450746.1 PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Cucumis melo])

HSP 1 Score: 261 bits (668), Expect = 8.87e-87
Identity = 143/151 (94.70%), Postives = 146/151 (96.69%), Query Frame = 0


Query: 1   MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60
           MVIS+PTLSFTSSIPKLPPSLSPS SSSKSAFFANNAT SFFT GDHNHSSLLRLTSFRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHK  TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKL 151
           SELKKEPEPTEETSVEKPTSTEAE+RQDLK+
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKV 151

[Close]

BLAST of Chy2G033990 vs. NCBI nr
Match: XP_038879779.1 (sec-independent protein translocase protein TATA, chloroplastic [Benincasa hispida])

HSP 1 Score: 222 bits (565), Expect = 1.01e-70
Identity = 126/151 (83.44%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 1   MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60
           MVISS TLSFTSSIP+ PPSLS   S SKSAFFANNAT +FFT GD NH SLLR + FRT
Sbjct: 27  MVISSATLSFTSSIPRPPPSLSSPFSCSKSAFFANNATANFFTNGDLNHFSLLRTSRFRT 86

Query: 61  TTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TT T HK  TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 87  TTYTPHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 146

Query: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKL 151
           SELKKEPE  EET+VEKPTS E EERQDLK+
Sbjct: 147 SELKKEPESIEETAVEKPTSAEEEERQDLKV 177

[Close]

BLAST of Chy2G033990 vs. NCBI nr
Match: XP_022969040.1 (sec-independent protein translocase protein TATA, chloroplastic [Cucurbita maxima])

HSP 1 Score: 207 bits (528), Expect = 1.77e-65
Identity = 120/150 (80.00%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 1   MVISSPTLSFTSSIPKLPPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60
           MVISS TLSFTSSIP+LP S SP LSSSKS+FFANNAT + F  GDH+HSSLLR T  R 
Sbjct: 1   MVISSATLSFTSSIPRLP-SFSPPLSSSKSSFFANNATANSFNKGDHSHSSLLRTTRSRK 60

Query: 61  TTKTTHKSFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           T    HK  TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLK 150
           SELKKEPE   ET+VEKPTS + EE+QDLK
Sbjct: 121 SELKKEPESIGETAVEKPTSVDDEEKQDLK 149

[Close]

BLAST of Chy2G033990 vs. TAIR 10
Match: AT5G28750.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 122.1 bits (305), Expect = 4.5e-28
Identity = 77/130 (59.23%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 18  PPSLSPSLSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRTTTKTTHKSFTCNALFGL 77
           PP   P LSSS+S+FF+N      FT     ++  L     R   + T K  TCNALFGL
Sbjct: 12  PPVSLPLLSSSRSSFFSN-----CFTVTTRPNTRSLVAIGRRIRQEPTRKPLTCNALFGL 71

Query: 78  GVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEK 137
           GVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQAAKEFESELK EPE +   S + 
Sbjct: 72  GVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQV 131

Query: 138 PTSTEAEERQ 148
            TS + EE++
Sbjct: 132 ATSNKEEEKK 136

[Close]

BLAST of Chy2G033990 vs. TAIR 10
Match: AT5G52440.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 42.7 bits (99), Expect = 3.5e-04
Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = 0


Query: 4   SSPTLSFTSSIPKLPPSLSPSLSS--SKSAFFANNATTSFFTYGDHNHSSL-LRLTSFRT 63
           SSPT++  S +   PP  S   +S  + S++F+   ++ F  Y    H  + +   S   
Sbjct: 13  SSPTIT-KSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKHLGISISPKSSNP 72

Query: 64  TTKTTHKSFTCNA-LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSF------- 123
             K   KS    A LFG+G PE +VI  VA LVFGPK L EV +++GKT+++F       
Sbjct: 73  EKKRRCKSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPTIREL 132

Query: 124 QQAAKEFESELKKE-------------------------PEPTEETSVEKP-TSTEAEER 159
           Q  +++F+S L++E                         P P    S E P T+ +  + 
Sbjct: 133 QDVSRDFKSTLEREIGLDDISTPNVYNQNRTNPVQPPPPPPPPSVPSTEAPVTANDPNDS 192

The following BLAST results are available for this feature:

BLAST of Chy2G033990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XH46	3.4e-28	57.24	Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum...	[more]
Q9LKU2	6.4e-27	59.23	Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis t...	[more]
Q9XFJ8	9.8e-20	64.37	Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays OX=4...	[more]
Q75GK3	1.3e-19	62.37	Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa ...	[more]
Q31RR1	2.6e-12	45.98	Sec-independent protein translocase protein TatA OS=Synechococcus elongatus (str...	[more]

BLAST of Chy2G033990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIV6	2.5e-82	96.02	Sec-independent protein translocase protein TATA OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LWL1	3.1e-69	94.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573670 PE=3 SV=1	[more]
A0A1S3BPB0	4.2e-66	91.67	sec-independent protein translocase protein TATA, chloroplastic OS=Cucumis melo ...	[more]
A0A6J1HYU6	7.2e-50	80.00	sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita max...	[more]
A0A6J1EWP2	5.2e-48	75.00	sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita mos...	[more]

BLAST of Chy2G033990 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10179.1	3.09e-107	96.02	sec-independent protein translocase protein TATA [Cucumis melo var. makuwa]	[more]
XP_004135654.1	6.82e-91	98.01	sec-independent protein translocase protein TATA, chloroplastic [Cucumis sativus...	[more]
XP_008450744.1	8.87e-87	94.70	PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Cucu...	[more]
XP_038879779.1	1.01e-70	83.44	sec-independent protein translocase protein TATA, chloroplastic [Benincasa hispi...	[more]
XP_022969040.1	1.77e-65	80.00	sec-independent protein translocase protein TATA, chloroplastic [Cucurbita maxim...	[more]

BLAST of Chy2G033990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28750.1	4.5e-28	59.23	Bacterial sec-independent translocation protein mttA/Hcf106	[more]
AT5G52440.1	3.5e-04	30.73	Bacterial sec-independent translocation protein mttA/Hcf106	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01506	TATBPROTEIN	coord: 94..113 score: 27.65 coord: 113..131 score: 24.85 coord: 74..94 score: 35.53
None	No IPR available	GENE3D	1.20.5.3310		coord: 76..127 e-value: 1.7E-18 score: 67.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33162:SF6	BNAC07G27450D PROTEIN	coord: 18..133
None	No IPR available	PANTHER	PTHR33162	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC	coord: 18..133
IPR003369	Sec-independent protein translocase protein TatA/B/E	PFAM	PF02416	TatA_B_E	coord: 77..126 e-value: 1.5E-19 score: 69.1
IPR006312	Sec-independent protein translocase protein TatA/E	TIGRFAM	TIGR01411	TIGR01411	coord: 76..122 e-value: 6.2E-20 score: 68.5
IPR006312	Sec-independent protein translocase protein TatA/E	HAMAP	MF_00236	TatA_E	coord: 74..148 score: 18.67668

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G033990.1	Chy2G033990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051260	protein homooligomerization
biological_process	GO:0043953	protein transport by the Tat complex
biological_process	GO:0032594	protein transport within lipid bilayer
biological_process	GO:0015031	protein transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033281	TAT protein transport complex