![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Chy2G033520 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCGAGGCCGAGGAAGAGGAGGATATCGTGGTCGAGGTCGTGGTATCAAAAAAGGATGCAACCGAAATGAAGAACAAAGGCAGTTCGGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATTGCAAGAAGTTTGGTCATGTAAAGGCAAACTGTTGGTATAAAAATTAGCGAGCCAATTTCTCAGCAGAGAATGAAGCATCGGAGAATAATGGAAAGGATGAAAATAAGCTTTTTATGGCAAACATACGCCCAGCGATGAAAAGACAGCGGAGGTGTGGTTCATTGATAGCGGTTGTCCAAATCACATAATAGGTTTGAAGCCTGTATTCAAGGAGCTTAACGAAGGGGAAAAGTTGAAGGTGGAGCTCGGAAACGACAAGGAGCTACAAGTCGAAGGCAAAGGAACGATGGGAATTGAAACTCACCATGGAAAAAGAATTCTCACAAATGTTCAGTATGTGTCCGGTATTGGATATAATTTGTTGAGTGTTGGACAACTAATGGATAGTGGGCATTCTATCTTGTTTGACGATGGTGCGTGCTTGATAAAAAATAAGCAAGCAGGACGAGTTTTGGCAAAAGTAAAGATGACTCAAAGCAAAATGTTTCCGCTGGAAGTCTCGAATGTGGAAATTTTTTCTCTTATTGCTACTACTACAACAACTAATACAACGAAGATCAACTTGGAGCTATGGCATTTAAGGTATGGACATCTTAATACCAAAGGGCTTTCTTTGCTAAACCAAAGAGATATGGCTATTGGGTTACCGAAAATCAGTGTTATTAATATCTGTGAAGGATGTGTGTATGGAAAACAAACTTGAAAAAATTTTCCTATTGGGAAAGCTTGGAGAGCCTCGAAGTGTCTCGAGCTAATTCATGATGATTTGTGTGGGCCAATGCAAACAAAGTCTCTTGGTGGGAGCTTTTATTTCTTGATTTTTATAGATGATCCAAGTCGTATGAGTTGGGTATATTTTCTAGAAAGTAAATCAGAAACATTTGAGAAGTTCAAGCATTTCAAGGTAAATGTAGAAAAGCAAAATGGCATGTACATCAAATCTCTTCATAGTGATAGAGGTGGAGAATTATTGTCCAACAACTTCAACCATTTTTGCGAGGAACATGGCATCCATAGGGAGTTGACGATACCTTACACTCTGGGGAAAAATGGGGTAGCCGAGAGGAAGAATCGAACTGTGGTGGAGATGGCGAGAAGCATGTTGCAAGTGAAAGGCCTTTCAAATGATTTTTGGGCTGAAGCAGTCTCGACTTCCATCTACTACTGAACATCTCGCCAACAAAGGCTGTCATGAATAAGACTCCGTTTGAAGCTTGGTATGGCAAGAAACCCAATGTAAGTCATTTAAGAGTTTTTTGTTGTATTTCTTATGCTTTGGTACCCTCTCAAGTTCGTCAAAAACTTGATAAAAAATCTGAAAAATGCATTTTTATTGGTTATTGTACTCAATCCAAAGCATATAGATTGTATAACCCTCTTAGTGGCAAAATTCTTACAAGAAGAGATGTAGTGTTTGATGAAAGTTGCTAGTTGGGATTGGCAAAATAATGAAGAACATGTTTCCCTGGTGGGTGGTGAATTGACAAATGATGGAGAACAAACTGTGGTTGAATCCTCAATGGAGATACTTACCTGAACACCTTCGTCGAGTGCTCCATCAACACCACAAAGTTACCACTCTGCATCAGTGATGATGACACATCGGATGAACTGCAATCTCAGAGGTTTCGATCCATGGAGGATATCTATAATTCTTCCCAATTTGCTCTTATGGTTTCTAACCCAGTGTGTTATGATGAGGCAGCAAGCAAAGAAGAATGGCAGCAAGCAATGAAGGAAGAAATAACAACAATTGAGAAGAATGGAACATGGAAAATGGTAGACTTACCCTAAGGAAAAAATGCAATTGGCTTGAAGTGGGTTTATAAGACGAAATTTGCTGCAGATGGGAGTTTAGAGAAGCACAAAGCTCGTCTTGTGGTGAAAGGATATGCGCAGCAACATGGTATTGATTTCAAGGAAACTTTCTCTCCTGTAGCACAACAACAACATGGTATTGTTCTAGTGTTGGCAGCACAACAACAATGGCCGGTTTATCAATTTGATGTTAAGTCAGCCTTTCTTAATGGGGAATTGCAAGAAGAAGTCTATGTTGAACAGCCAAAAGGTTTTGTTAAAAAGGATAGCAAAGAAAAGGTGTATAAGTTGACAAAGGCGTTATATGGGTTGAAACAAGCTCCTCAGGCGTGGTATAGCAAAATCGACGGATTTTTTCAGCAAAACAGATTCAAAAGGAGTGCAAATGCGCATACCTTGTATGTGAAAAAGGAGGTAAAAATGACTTCATAATTGTTTGTCTTTATGTTGATGATATCATTTATACTAGTTCCTCTAAATCTCTTGTCGCTAAAGAACAAATTTGAGATGACAAATTTAGGTTTGCTACATTTCTTTCGGAGCAGCAAAGCGGGTTATGCGATACATTGCTAGAACTATAGAATATGGCATTTGGTACTTTAAAGTTTCTGATTTTAAATTTCTGCGGGTTAACAGACAGTGATTGGGAGAGCTCCTTGGATGATAGGCGGAGTGTTTCAGCCAATGTTTTCACTTTAG ATGACTCGAGGCCGAGGAAGAGGAGGATATCGTGGTCGAGGTCGTGGTATCAAAAAAGGATGCAACCGAAATGAAGAACAAAGGCAGTTCGGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATTGCAAGAAGTTTGGTCATCGAGCCAATTTCTCAGCAGAGAATGAAGCATCGGAGAATAATGGAAAGGATGAAAATAAGCTTTTTATGGCAAACATACGCCCAGCGATGAAAAGACAGCGGAGGTGTGGTTCATTGATAGCGGAGCTTAACGAAGGGGAAAAGTTGAAGGTGGAGCTCGGAAACGACAAGGAGCTACAAGTCGAAGGCAAAGGAACGATGGGAATTGAAACTCACCATGGAAAAAGAATTCTCACAAATGTTCAGTATGTGTCCGGTATTGGATATAATTTGTTGAGTGTTGGACAACTAATGGATAGTGGGCATTCTATCTTGTTTGACGATGGTGCGTGCTTGATAAAAAATAAGCAAGCAGGACGAGTTTTGGCAAAAGTAAAGATGACTCAAAGCAAAATGTTTCCGCTGGAAGTCTCGAATGTGGAAATTTTTTCTCTTATTGCTACTACTACAACAACTAATACAACGAAGATCAACTTGGAGCTATGGCATTTAAGGCGTGGTATAGCAAAATCGACGGATTTTTTCAGCAAAACAGATTCAAAAGGAGTGCAAATGCGCATACCTTTGATTGGGAGAGCTCCTTGGATGATAGGCGGAGTGTTTCAGCCAATGTTTTCACTTTAG ATGACTCGAGGCCGAGGAAGAGGAGGATATCGTGGTCGAGGTCGTGGTATCAAAAAAGGATGCAACCGAAATGAAGAACAAAGGCAGTTCGGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATTGCAAGAAGTTTGGTCATCGAGCCAATTTCTCAGCAGAGAATGAAGCATCGGAGAATAATGGAAAGGATGAAAATAAGCTTTTTATGGCAAACATACGCCCAGCGATGAAAAGACAGCGGAGGTGTGGTTCATTGATAGCGGAGCTTAACGAAGGGGAAAAGTTGAAGGTGGAGCTCGGAAACGACAAGGAGCTACAAGTCGAAGGCAAAGGAACGATGGGAATTGAAACTCACCATGGAAAAAGAATTCTCACAAATGTTCAGTATGTGTCCGGTATTGGATATAATTTGTTGAGTGTTGGACAACTAATGGATAGTGGGCATTCTATCTTGTTTGACGATGGTGCGTGCTTGATAAAAAATAAGCAAGCAGGACGAGTTTTGGCAAAAGTAAAGATGACTCAAAGCAAAATGTTTCCGCTGGAAGTCTCGAATGTGGAAATTTTTTCTCTTATTGCTACTACTACAACAACTAATACAACGAAGATCAACTTGGAGCTATGGCATTTAAGGCGTGGTATAGCAAAATCGACGGATTTTTTCAGCAAAACAGATTCAAAAGGAGTGCAAATGCGCATACCTTTGATTGGGAGAGCTCCTTGGATGATAGGCGGAGTGTTTCAGCCAATGTTTTCACTTTAG MTRGRGRGGYRGRGRGIKKGCNRNEEQRQFGVQSSNKANIQCYHCKKFGHRANFSAENEASENNGKDENKLFMANIRPAMKRQRRCGSLIAELNEGEKLKVELGNDKELQVEGKGTMGIETHHGKRILTNVQYVSGIGYNLLSVGQLMDSGHSILFDDGACLIKNKQAGRVLAKVKMTQSKMFPLEVSNVEIFSLIATTTTTNTTKINLELWHLRRGIAKSTDFFSKTDSKGVQMRIPLIGRAPWMIGGVFQPMFSL* Homology
BLAST of Chy2G033520 vs. ExPASy TrEMBL
Match: A0A5D3DWP2 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00850 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 3.6e-82 Identity = 176/240 (73.33%), Postives = 185/240 (77.08%), Query Frame = 0
BLAST of Chy2G033520 vs. ExPASy TrEMBL
Match: A0A5A7UN91 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00520 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 6.1e-82 Identity = 175/240 (72.92%), Postives = 185/240 (77.08%), Query Frame = 0
BLAST of Chy2G033520 vs. ExPASy TrEMBL
Match: A0A5D3DWC7 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00230 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 1.2e-80 Identity = 174/244 (71.31%), Postives = 183/244 (75.00%), Query Frame = 0
BLAST of Chy2G033520 vs. ExPASy TrEMBL
Match: A0A5A7TVH1 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00750 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 7.3e-67 Identity = 152/225 (67.56%), Postives = 163/225 (72.44%), Query Frame = 0
BLAST of Chy2G033520 vs. ExPASy TrEMBL
Match: A0A5D3D4A4 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00940 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 2.7e-61 Identity = 141/211 (66.82%), Postives = 152/211 (72.04%), Query Frame = 0
BLAST of Chy2G033520 vs. NCBI nr
Match: KAA0054939.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] >TYK22728.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 310 bits (795), Expect = 9.12e-99 Identity = 175/240 (72.92%), Postives = 185/240 (77.08%), Query Frame = 0
BLAST of Chy2G033520 vs. NCBI nr
Match: TYK27735.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 311 bits (797), Expect = 3.33e-97 Identity = 176/240 (73.33%), Postives = 185/240 (77.08%), Query Frame = 0
BLAST of Chy2G033520 vs. NCBI nr
Match: TYK28117.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 306 bits (784), Expect = 2.72e-96 Identity = 174/244 (71.31%), Postives = 183/244 (75.00%), Query Frame = 0
BLAST of Chy2G033520 vs. NCBI nr
Match: KAA0045239.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] >TYK19267.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 259 bits (663), Expect = 4.23e-82 Identity = 152/225 (67.56%), Postives = 163/225 (72.44%), Query Frame = 0
BLAST of Chy2G033520 vs. NCBI nr
Match: TYK18373.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 243 bits (619), Expect = 2.54e-77 Identity = 142/211 (67.30%), Postives = 154/211 (72.99%), Query Frame = 0
BLAST of Chy2G033520 vs. TAIR 10
Match: AT3G20980.1 (Gag-Pol-related retrotransposon family protein ) HSP 1 Score: 42.4 bits (98), Expect = 6.6e-04 Identity = 33/105 (31.43%), Postives = 51/105 (48.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|