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Chy2G033480 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTCCGAAAATAAGTCTGTGTCAAGGGACGTGCAAGAAATTGGACATAATGCAGTCCGCATACACAACGAAGAAAAACCAGACACTTTGATTTTCCTTCGTGTGATAAACTACTTGGAATATGTAAATCATACTTGCAAGAGGTATGCTATAGTGCTAGAAGCTATAAATAAGGATAAAATTATCTGGACATATGTGACTTCGATTGCAATTCCACGACCATCAGTCTTTGAACTCGTATCTTTTAAAGATCTCCTCGGGTACTACCCCTAATAGTATGAAAATAATCGTTCTATGTGTGTGTGTGTGAGAGGCATTATTGTCTTTTGCCTATATGAAAATAAATGGTATAACCATATAATAAGAACAATGATACTTATCTATTATCTCTCTTTCTCATTTTTTTTTCCTCAAATTTTGCAGTAAAGTATACATGGTGCGATCCAGAAATTATAATTTGTTATATAATCGTAACTTGTTTGTCAGTCTTGGTGCTTCAATAGGAATTAAGGGAGAGTAACCAATGGCGCGGCATATCTTTGACCTCATTCTTTTCAAAATTAAAACAAGGCCACAGTTAATATAATTAATGCCAACTTCTAGGTATTTTCCATCTATCTAAGGCATCTCCTCCTTTTTCACGTTTCTCTCTCCAAAAGCATCTTTTTTTTTTTTCATATGATAAAGAACTGATAAATCATTTTCTCTTTTGGTTTTGGGACGTTATGAGTGTGCTATACAAACATTTAAACTAGTTGAGATGTCTTAGTGCATCCTAATCTCTCTTGTGAAATTTTTCAAAAAAAAAGAATGAAATAAACTTGTTCAACGGAGTATGACCAAACCAACCTCCTATGTTTTGAACAAAAATATTATGATCAAAGGGATAACTTTGAGACAAAAAATCAAACATGGCCACTAAAAGATGAACCTCTCCATCAACTGTAAACCCAAAAAAGATGTTTCCTTCAATCTCACTCAAAACCGTATTCAAAGAATCAATTTTAAAAGAATTTGCTTTCGAAGAAAATCCTTCAAGAATCATATTTTCTTTATCATTCGCTACAAGTTCTACGGTTTGAAGATTCATTTCCACCGCAATCAATGTATCGTTGTTATTGTTCGATTTTTGCTCGGTGTTTGATACTTCTTTTTCATCTTCTTCGTTGGATTTTTCTTCACTTGTGACCATTTCCAAATCAACATTTTCAAAATCTTGTTCTTCAATTTTATCTTCAAGATTTTCTATTTGAAAATTTTCCAACTGTGATTCTTTTGTTTTTTCTTTCATATATGAAACAAATTTGTTCTTGGACTCTTGCAAATAAATTGATGGTTGATCTACATGTTGAGTCGTTCTTGCAAAATCTTGAAAGCAATCTTGAAATCTTGGGGAAACTTTTTGATACTTTTGATTAGGTCTCCTACGTTCTTGAGCTTCAAACCTTTTTTCTTGAAGAATTTGGCGGTATTCTTGAATTCTTACATGGGGTTCTTGGTAATCTTGGACTAGTTTTCTCCTTTCTTGCACTTCAAACTTTCTTTCTTGATGATTTCGTCCAACTCTATGTACTCCAGCCCCTCGAATGCCTCGTTGCCCCCAATCTTGGACTAAATTTTGACATTCTTTGTGGCATAATTGGCCAGAAATTCGGCTGGCAATGCGCCGAACTTCTTGGTGGTTTCTATTACTGATTTCTTGCTGTTGGGGAAGGGCAGTCAACCCCACTTCAAGTCGGCGAGCAAGTTGTTCCACGGTGGCTTCAAGATTTCCCATTCAATCGAACACTTCTACCATGCTTTCTTCAACGGCCATCAATTGGGCAGTCGAAGTGCGTGGAGATGGGATCTCTTCTTCATTCGGCACTACATTCTCTCCCTTGCCGGAGGTGTTCTTGCCGGTCACAACTCCCTTCATCGATGAAGCTCTGATACCAATTTGATGTAATCTAAGTAACCTCAGGAGAAATCCTCCAAGAACCAAGATTATGGATTTTTTATTAGAATGAATAATATGCTATACAAGAGGAGAAGACTCCTATTTATAGATTTCTATTACAATTGGGGGTAAAAAGGGAATTAACCTAGAATATTACCTAATTACGCAATTAACCCTTAGCCTTCTTACATCACAAACATACGCCCAGAGATGAAAAGACAGCGGAGGTGTGGTTCATTGATAGCTGTTGTCCGAATCACATAAAAGGTTTGAAGCCTGTATTCAAGGAGCTTAACGAAGGGGAAAAGTTGATATGGGAGCTCGAAAATGGCAAGGAGCTACAAGTCGATGGCAAAGGAACGATGGGAATTGAAACTCACCATGGAAAAAGAATTCTCACAAATGTTCAGTATGTGCCCGATATTGGATATAATTTGCTGAGTGTCGGACAACTAATGGATAGTGGGCATTCTATCTTGTTTGAGGATGGTGCGTGCTTGATAAAAAATAAGCAAACGGGACGAGTTTTGGCAAAAGTAAAGATGACTCAAAGCAAAATGTTTCCGCTGGAAGTCTCAAATGTGGAAAATTTTGCTCTTACTGCTACTACTACAACAACTAATACAACGAAGATCAACTCGGAGCTATGGCATTTAAGGTATGGACATCTTAATATCAAAGGGCTTTCTTTCTAACCAAAGAGATATGGTTATTGGGTTACCGAAAATGAGTGCTATTAATATCTGTGAAGGATGTGTGTATCGAAAACAAACTCGAAAAACTTTTCCTAATGGGAAATCTTGGAGAGCCTCGAAGTGTCTGGAGCTAATTCATGATGATTTGTGTGGGCCAATGCAGAGCTTTTATTTCTTGATTTTTATAGATGATCATAACCATATGAGTTGGGTATATTTTCTAGAAAGCAAATCATAAACATTTGAGAAGTTCAAGCATTTCAAGGTAAAGGTAGAAAAGCAAAGTGGCATGTACATCAAATCTCTTCGCAATGATAGAGGTGGAGAATTATTGTCCAACAACTTCAACCATTTTTGCGAGGAACATGGCATCCATAGGGAGTTGACGACACCTTACACTCTGGAGCAAAATGGGGTAGCCGAGAGGAAGAATCAAACTGTGGTGGAGATGGAGAGAAGCATGTTGCAAGTGAAGACCTTTCAAATGATTTTTGGGCTGAAGCAGTCTCGACTTCCATCTACCTACTGAACATCTCGCCAACAAAGGCTGTCATGAATAAGACTCCGTTTGAAGCTTGGTATGGTAAGAAACCCAATGTACGTCATTTAAGAGTTTATTATTCAGTGACAAAATTTTAATGGCGAAGTAGTTTTTGTCAGTTAAAGTTCGTTTATAGCGACGCAAAAAAATTATGTCACAAAAGATTATTACTAGCGACACATTTTAATTCGTGCCACTAAAAAAATTAGTAACACACAACAATAGTGTCACTAAAAATTGAATAGTTTTAGCAATAAACTATAATAAAATTTCCCCTTTACTTAAAATTTCCCTCCAACTTTTCATTAAAGATTTTATTAAATGTAAATTACTTTTTAGTTTCACCTTTCACTCTACCATCTTCACAAACCCCTTCAAAAAAACCCCAACCCTAATCTTCTCCATCTCCACCGGTCAACTACACATCGATGGCGACCCTAGAACAAAAGCGGCAGAATATCAAGATTCAAAACCCTCGAGCAGTAAGTAAGATCGTGACTTGATGGTACCTTAATTTTAAAATATCTATCACCAATATATAAACGTTCATAGACTTCTAAAAATATTTTGTTATAACTTGTAAATAGTTAATTCCATTGTCCAATTTTTAAAAATCCCAAATAGAAAAAAATTTGATTCCAAACTATCTTATTATCTATGAACTGTGTACTGTTAAGCAAGAGAGATACAAAAAGTAGACGATTCCATTCTATCAAAATTAGACACAATTGAAATGAATATGTAGATTGTTATAAACCACACACAACTATATAAATACCAAACTCCTAACTCCTAAGTATTCATGAACAAAACACACAAACTTTACTACATAATAATATATCATCTTCTAAAACTATCTATCCATAAAAAGTAGATTGTTGCAGTATGTGTTCCGAAAATAAGGGATCACCCATTCATAACATCAATCAGCGAAAGGACGTGCAAGAAATTGGATATAATGCAGTCCGCATACACAACGAAGAAAAACCAGACACTTTGATTTTCCTTCGTGTGATAAACGGCCTGGAGGATGTAAATGATACTTGCAAGTCGTATACTCTGGTGGTGGAAGCTATAAATAAGGATAAAATTATCTGGACATATGTGACTTGGATTAAAACTACAGAACCTGATGGTACCTATCAACAATCTTTTAAAGATCCCCTCGGGTACTACACCTAA ATGTGTTCCGAAAATAAGTCTGTGTCAAGGGACGTGCAAGAAATTGGACATAATGCAGTCCGCATACACAACGAAGAAAAACCAGACACTTTGATTTTCCTTCGTGTGATAAACTACTTGGAATATGTAAATCATACTTGCAAGAGGTATGCTATAGTGCTAGAAGCTATAAATAAGGATAAAATTATCTGGACATATGTGACTTCGATTGCAATTCCACGACCATCAGTCTTTGAACTCGTATCTTTTAAAGATCTCCTCGGAGATGAAAAGACAGCGGAGGTGTGGTTCATTGATAGCTGTTGTCCGAATCACATAAAAGGTTTGAAGCCTGTATTCAAGGAGCTTAACGAAGGGGAAAAGTTGATATGGGAGCTCGAAAATGGCAAGGAGCTACAAGTCGATGGCAAAGGAACGATGGGAATTGAAACTCACCATGGAAAAAGAATTCTCACAAATGTTCAGTATGTGCCCGATATTGGATATAATTTGCTGAGTGTCGGACAACTAATGGATAGTGGGCATTCTATCTTGTTTGAGGATGGTGCGTGCTTGATAAAAAATAAGCAAACGGGACGAGTTTTGGCAAAAGTAAAGATGACTCAAAGCAAAATGTTTCCGCTGGAAGTCTCAAATGTGGAAAATTTTGCTCTTACTGCTACTACTACAACAACTAATACAACGAAGATCAACTCGGAGCTATGGCATTTAAGTATGTGTTCCGAAAATAAGGGATCACCCATTCATAACATCAATCAGCGAAAGGACGTGCAAGAAATTGGATATAATGCAGTCCGCATACACAACGAAGAAAAACCAGACACTTTGATTTTCCTTCGTGTGATAAACGGCCTGGAGGATGTAAATGATACTTGCAAGTCGTATACTCTGGTGGTGGAAGCTATAAATAAGGATAAAATTATCTGGACATATGTGACTTGGATTAAAACTACAGAACCTGATGGTACCTATCAACAATCTTTTAAAGATCCCCTCGGGTACTACACCTAA ATGTGTTCCGAAAATAAGTCTGTGTCAAGGGACGTGCAAGAAATTGGACATAATGCAGTCCGCATACACAACGAAGAAAAACCAGACACTTTGATTTTCCTTCGTGTGATAAACTACTTGGAATATGTAAATCATACTTGCAAGAGGTATGCTATAGTGCTAGAAGCTATAAATAAGGATAAAATTATCTGGACATATGTGACTTCGATTGCAATTCCACGACCATCAGTCTTTGAACTCGTATCTTTTAAAGATCTCCTCGGAGATGAAAAGACAGCGGAGGTGTGGTTCATTGATAGCTGTTGTCCGAATCACATAAAAGGTTTGAAGCCTGTATTCAAGGAGCTTAACGAAGGGGAAAAGTTGATATGGGAGCTCGAAAATGGCAAGGAGCTACAAGTCGATGGCAAAGGAACGATGGGAATTGAAACTCACCATGGAAAAAGAATTCTCACAAATGTTCAGTATGTGCCCGATATTGGATATAATTTGCTGAGTGTCGGACAACTAATGGATAGTGGGCATTCTATCTTGTTTGAGGATGGTGCGTGCTTGATAAAAAATAAGCAAACGGGACGAGTTTTGGCAAAAGTAAAGATGACTCAAAGCAAAATGTTTCCGCTGGAAGTCTCAAATGTGGAAAATTTTGCTCTTACTGCTACTACTACAACAACTAATACAACGAAGATCAACTCGGAGCTATGGCATTTAAGTATGTGTTCCGAAAATAAGGGATCACCCATTCATAACATCAATCAGCGAAAGGACGTGCAAGAAATTGGATATAATGCAGTCCGCATACACAACGAAGAAAAACCAGACACTTTGATTTTCCTTCGTGTGATAAACGGCCTGGAGGATGTAAATGATACTTGCAAGTCGTATACTCTGGTGGTGGAAGCTATAAATAAGGATAAAATTATCTGGACATATGTGACTTGGATTAAAACTACAGAACCTGATGGTACCTATCAACAATCTTTTAAAGATCCCCTCGGGTACTACACCTAA MCSENKSVSRDVQEIGHNAVRIHNEEKPDTLIFLRVINYLEYVNHTCKRYAIVLEAINKDKIIWTYVTSIAIPRPSVFELVSFKDLLGDEKTAEVWFIDSCCPNHIKGLKPVFKELNEGEKLIWELENGKELQVDGKGTMGIETHHGKRILTNVQYVPDIGYNLLSVGQLMDSGHSILFEDGACLIKNKQTGRVLAKVKMTQSKMFPLEVSNVENFALTATTTTTNTTKINSELWHLSMCSENKGSPIHNINQRKDVQEIGYNAVRIHNEEKPDTLIFLRVINGLEDVNDTCKSYTLVVEAINKDKIIWTYVTWIKTTEPDGTYQQSFKDPLGYYT* Homology
BLAST of Chy2G033480 vs. ExPASy TrEMBL
Match: A0A5D3DWP2 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00850 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 1.5e-64 Identity = 128/149 (85.91%), Postives = 137/149 (91.95%), Query Frame = 0
BLAST of Chy2G033480 vs. ExPASy TrEMBL
Match: A0A5A7SM62 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001140 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 2.9e-63 Identity = 126/149 (84.56%), Postives = 137/149 (91.95%), Query Frame = 0
BLAST of Chy2G033480 vs. ExPASy TrEMBL
Match: A0A5A7UN91 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00520 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.1e-62 Identity = 126/149 (84.56%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Chy2G033480 vs. ExPASy TrEMBL
Match: A0A5A7TVH1 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00750 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.1e-62 Identity = 125/149 (83.89%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Chy2G033480 vs. ExPASy TrEMBL
Match: A0A5D3DWC7 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00230 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.1e-62 Identity = 128/149 (85.91%), Postives = 134/149 (89.93%), Query Frame = 0
BLAST of Chy2G033480 vs. NCBI nr
Match: KAA0045239.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] >TYK19267.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 247 bits (631), Expect = 4.49e-76 Identity = 125/149 (83.89%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Chy2G033480 vs. NCBI nr
Match: KAA0032274.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 249 bits (636), Expect = 1.03e-75 Identity = 126/149 (84.56%), Postives = 137/149 (91.95%), Query Frame = 0
BLAST of Chy2G033480 vs. NCBI nr
Match: TYK27735.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 253 bits (647), Expect = 5.75e-74 Identity = 128/149 (85.91%), Postives = 137/149 (91.95%), Query Frame = 0
BLAST of Chy2G033480 vs. NCBI nr
Match: KAA0054939.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] >TYK22728.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 247 bits (631), Expect = 3.94e-73 Identity = 126/149 (84.56%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Chy2G033480 vs. NCBI nr
Match: TYK28117.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 247 bits (631), Expect = 1.91e-72 Identity = 128/149 (85.91%), Postives = 134/149 (89.93%), Query Frame = 0
BLAST of Chy2G033480 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein ) HSP 1 Score: 47.0 bits (110), Expect = 3.5e-05 Identity = 31/123 (25.20%), Postives = 57/123 (46.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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