Chy2G031660 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G031660
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	U1 small nuclear ribonucleoprotein A isoform X2
Location	chrH02: 5801884 .. 5807980 (+)
RNA-Seq Expression	Chy2G031660
Synteny	Chy2G031660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACATGACGAGCTACTATCCGCCACCGCAACCACCGCCGCAGCCTTCTGGTCTTGAACCTCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCAGCACCCCCGTCTCAGCATTACCTCTCTCAACACCCGCCCACCTTCGCTTCCTATGCCTTACCTCTTTTACCTCACACAACCTCCATCAATGAGGTCCGTACCCTATTCATAGCTGGTCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGATACGAGTCCTCTCATCTTCGGACCCCCACTCAGACGACCCAGGTCTTCTACTTTGCAAAATCGTTGTTGTTGGTGTTTTGATTTTTTTTTTTTTTAATGGATTTTGTCTTTTTCTTCCGAATGTGAATTGTTTCTGATTTGGGTGTCTGGGTGCTTACACTTTTTAAAATACGCTTAGCTTAAATTCGTGGGCATTCAGTTGCTTTCGTATCAAAGATGGAGATTAATGTTAGGATTGTACAAACAAAAGTCCCACATGAAGTGATTACAAACAAATACTAAATGATCATGGGTATGAAGTATGGGCAATTGGGTGGTTCCAAAAGCAAAGCTTTGACAGTTTATGATGCTATATCATACCATATCATATGTGGAGGTTTGGTTGTCCTTATCAATCAAACTCCGGTTCATAGACAATTCTGGCTAGATCCCTGAATGTTTCCGAGTCTCTGACTTTTGAAGAAGTTGAAGATGATATTGGTTAAACGAAATTAGCTTGGACCTGATTTTTTGGGGCTCATTTACCTGAGATTTTTTCTTTTTTTGGCACCCAAATGTTGTTGTGTTAGCAGGACACGAAGTGTGTGCAACTAGTCCGAGCACTCATGGACATAAAAAACAGAAAAAATACAAAGTTAAAAGTAAACCACAAAAGAAGAAAATACAAAGTAAATTTATTTCTCAAATCTTAATTCAACATCCCTTGAAACTCGCCCATGCCCACTGTGAGATTGTTAAATGAACTATAGATGTGCTGTGTCAAATTCTAACGGAATGTCATTATGAATATTGATACCAATACAGCTACTTATAGCCTAATACCGATGCCGATTTGAAATCTGATGCATAGTAGACTCCTTTGGCCTACTGAGTTTTAGTGGAATGCAATTTTTTTATATTAACAAAATTTTACAAAGTTGACATATTCCCATATCTATGGATTCTATATTTGGCCTATATCTGTATTTGTGATTCTTATGTTTTCGCTAGCTCAACATAGGGACATTATTGACACGATCAGGGAGTTCTTCCTCTATTAACAAATATAACTGTTAATTAGCTATAACAGTTTGTAGCTATAACAGTTATAACAGTTTGTTAGTTGAATTCTGTTTGTAAATAACTGTTGTTAGTCTGTTAATTAGTTTGTAAATAACAGTTGTTAGTCTGTTAATTAGTTTCATTTCCATGCATCAAAGCTCTCTTATAAAAAGGGAACTTTAAGTCTGTAAATAGAATAAGTGAAAGTTAATAGAAGAATTTCTTCACACATCTCTCTCAAACTCAGTATGGTATCAGAGCAGGTGGTCCAGGGAGGTCCTGTGTTCAAGCCCCTGCATTGTCGTTTCCTCCCCAATTAAAATCAATTTCCACTTGTTGGGCCTTTCAAATATTTCAAGCCCACAAGTGAGGGGGAGTGTTTGTGATATATAATTAAATTTGCCTTCAACCACTAGCTTAAGCTTTTGGATGAATTGGTGGTTTAATATCCTCCATCTGTCTTATTGTGAGAAGAGTTGTTTTGTTGGCTTTGTGGGGTGTGCTATTTTGTGGGATGTGCTATTTTGTGGGATCTTTGGGGAGAACAAAATAGCAAAGTGTTTAGTGGGTTGGAGAGGGATCCTAGCAATATTTGGTCCTTTGTGTTAGATTTCGTGTTTCTATTTGGGCTTCGATTTTAAAGATCATCTATACCTATTTACTTGGGGCACCTTTCTTTAGTGGGTTCCCCCTGTGTTTCTTTTTGTTCTTTCATTTAGTTTCAATGAAAGTAGTTGTTATTATTAAAAAAAACTATGTTTCTTTCTTTTGTTGCATTTAATTGGAAGATAGTGGCTTGTAATAGGACGTTGTGTTTTGTTATCAAGACAACAACCTGAAATATTTTTTGGCAATACTTAAACATGATTGCGTTGGATTTGTGTTTAGTATCTATGTTTAAGGGTTCTCAAGTTAGGCGATGTACTCTTAGGTTCTGGGAATGGTGGGCATACGAATTAGTCTCTATATTTTGATCAAGTCAAGATGTATGGAGACGAAGCATAAGCTGATATGTTAATATCCCATGTTTTCAACTGCAAATGCTATGTTAATCTGTAGTTTCAAATCCAGTTAATATTGATAGTGAAAGCTTGGGAGCTTTATTAGTATTGGTAAAGGCAGTTTACCAGCTTTTCATATTTTCCAACCTACAATCTATATTTCTGCAATAAATTGTAGTAAATTTGTGCAAATACTATTCAAATATGTGTACGTTGTGCCTATGACTGTCACTTGAACTTTTAAAAGATTGTAATATTCTTTTTGCACTCTGATGTAATATCTTACGTATACAGCTTACCTATCACCGCTTGTGTTACTTTATTGATTAGTGTTATGTACGAATTTTCTTACAATTTTTTTGGTGTGGTTACAGCCATTTGCATTTGCTGTATTTTCAGACCAGCAGTCTGCCGTTGGTGCAATGCATGCTGTAAATGTAAGTGTGCTTGTTCCTTGCTTCTGTATTCCAAGTTCTTTTGTTAAGAAAATCATTTTGATGATCGAAGGAAGTAGATAAAAGGAAATTGGAAGAAGGGCACGATGGGGTGAGGAGTGAAGTAAGAAGAAAAATAAAGAAGAGAGGTTGCAATGAAAAAGTGGTGGAAGAACGACAAGAAGAAGACCTTACAATTTAGATTTGTAAGAGAGAGATTCAGATTTGTGATAGGAGGTGGAGGGAAGAGGTTACAACGGTGGATGGGCAGCAACTGAGTGGAGAAAGAGGAAGGGGCCGGAGGGGAGGGGAAAGGGAAGGGCCAAAGGGGGTGGGTGGAGGTCGAGAGAATTTTTTGTTTGTCTCTAAATTATTTTTATCATTTTCTTCTTATAATTATTTTTATTATGCCACATCATCTCTGCATTGGAGCTGTTAACCAAGGAACTAAATCGTACTATTTCCTATTTTTTGGGACTTGATTGTTTAATTTTAAAACCTAGGAACTAAATTGAGACAAACCCTAAACCTCATGGAGTAATTCATCCTTTTTTTTCTTTTGCATTTTTGCTTTCAATTCGTTGGTTGTTCTTTTGAGGCTGCTAATAATAATTGTAACAAGGGGTTAGAGAGTTTTTTGGGTCACCTTCTTAGCAGCTTATAAAATTAGAAATTGCAAGGATGAAGATAAAAAGATTTTTACTATTGGTTAATGTATCACATTAGATTATTGAAACAATTGGTTGCTCTTTGTTGTAGGGCATGGTGTTTGATCTTGAGAAGCAGTCAGTACTGTATGTTGATTTGGCTAAATCTAATTCAAGATCAAAACGGATGAGGACAGGTACATATCTTGATGGCTCTTCTACTACAAATTTATATTTATATTTTATTTAGTCGTATAACCAGTTCCGAATATTTTCTTGATGTGTTCATCAAATGGTTAGAGGAGGAAAGATATGGATCAGATAAGAAAGCTAAAGTCTCTATCATTCCAAGGAGTACTCCTGATCCTGGTAAGATGATTGCCTAGCACTTTTTATGCTTGTAAGCAATTTCTTATACAAGCTCTTTTAAAAAATAATAATAAAATAAAATAAATTCTCTGTTCTCTTGATGCCCCTTACGGTATCTATTATTATGCTTATTTTTAATGTATAAATCTGCCCCCTCTGATTTATTTGAGGATGATTATGCGCTGTCTGTACAAACTCCTGGGGTAAGGAGTAATTGATTAGTCACGCAGAGGACACATTATTCTAAAAGCTCATTTTGCACATGTTTTGCACGCTTGGGGCACTAGCAGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGGTCATCTGCACTACTTAGCACATCTTTATTATTGAAATGGTTAATTACAAGCTTATGTGAAGCTTATACATTATTGTCAACAGTAATCACTAGTAGAATGTGTCCAAGGGCTTCAGTAAAAGGCTCTTACCATACGCCCTGACTCCTGTGTTAGGTTTTTAACTTTTGTATACTTGCTTTGTTATGTTTCTTCTTCTAAGTTCTAACTATCTAGTACTTTCTATCATCAGCCATGGAAGCTTTGATAACAAAACTGTAAACGATACAGTGGCTGCAAATGTGGTAAGGCCCCTCTATGTTACAATCTACGATTCTTCAGTCCCTATAAGCTGCCATACATCCTCTCTTTCTGTCCCAAAAGCATTATATGACCAATAATTGAATTGCTTATCCTATTATAAGTAGCAAGTAATTTTTTAACTTAATTATATACCAAATTGGGATAACAATTCGCACCATCAGCTAAATCTATTTTACTTTTCATTTTCTATCCACTTGAAATTGGCTATGTATTTTCCTTTAAATTTTTATTGTCCAATGGCTCTATGGGCTCCATTGTTGTACTGTGGTTTATCTTGATGAAAAGAAATAGAATGGTTTTGAGGGTAGATAGGTTGTGGGAGTGGATATGTCACACTTTAATGCCCTCAAACTGGCTCGTAATTGATAATTTTTAATTGTTTTCTTTTGTATTACCATAGTTTGAGTTCTTTCTTGTAGGTTGCTTTGTATTCTACACTTCTTGTTTGGCCTTTTTGTGGGCTTCTTTTTGTACGTTTAGTGAAAAGTTAATTTTCCCATTTCAAAATAAATATGTAGGCAGGCTTAACTACTAGAACCAGCATTGGGTAAAATTTATTTACCTTGAACGTCTACAATAATATTTGCACTTATTTCTTTGATTTTTTATCATCTCTTTTCGAGAGCTGGGAAATTAGAATTCTGGGAATAAGGCTGCGACCATATTAAATAAAAGAAAAGCTGCAACCATATTAACGCTGGTGTACTTGAAGATTTTCTCATGAACAGAATGTATAGAATCATAAATCATTGAATGTTGTATGTATTGCAGTACAATTCTGCCATGACATTTTGTATTTATGCATAAATACAGTCACCTATGGTGAAAATTGTTTAGTTATGTTTGAAAAACCATTTGTAGCACAATATAGTTGGTGAATCCTGTTAACTTTGGGTGAATTTTTCTTCATGATCAGATTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTAGGGCCAGGTTGCACTGAACAAGAGCTTATTCAAAATTTTCTGAGGTTAGTAATTTTAGTGCACGTTACTTAGGTTATGTTCTGAACATCTAAGAACATGCATCATCTGTTTCTTTTATAATTCCCACCAGATGCCCGGGATTCTTAAAACTAAAAATGCAGAGCACGTATGGAGCCCCAGTTGCTTTTGTAGATTTTCAGGTTAGGAGTGCCCTTCCTCTTCTCAATTATATTTTTCTCTAGCTGATGAATCTTTTTCTACGTAGCATTGAAATTCACGAATCAGACTCCATTCTGCGGTTTTTTTCCATTAGTTATGTGCAGACGATCTGCACTAACCCGCATCATCACGCTTATAGCTTTGTATTTTTTATTTCCCTGAACATTCACTCGACTTGTTGCTTTTTAGATACTCCAGAGAACTTTTTATTGGTGTAAAAATAATATTTGGAAGTTCAATTTTGTCCGTTGCTTCCATTGTTTCAAGTTCAGGCCATTAATTAAATCTTTCACGTAGTATTTATTTAAAGCTTGACCAAGTATTTTTTAGATGGAAAAGGTATCTGGGTCTTCCATTGTTATGTTTGTGTGAAATGTGGAGTTACAATGTATGCAGGATACGGCCTGTTCAACTGGAGCTCTGAACCATCTGCAAGGCTCAATTCTGTACTCATCACCTCCTGGGGAGGGCATGCGATTGGA

mRNA sequence

ATGGACGACATGACGAGCTACTATCCGCCACCGCAACCACCGCCGCAGCCTTCTGGTCTTGAACCTCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCAGCACCCCCGTCTCAGCATTACCTCTCTCAACACCCGCCCACCTTCGCTTCCTATGCCTTACCTCTTTTACCTCACACAACCTCCATCAATGAGGTCCGTACCCTATTCATAGCTGGTCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGATACGAGTCCTCTCATCTTCGGACCCCCACTCAGACGACCCAGCCATTTGCATTTGCTGTATTTTCAGACCAGCAGTCTGCCGTTGGTGCAATGCATGCTGTAAATGGCATGGTGTTTGATCTTGAGAAGCAGTCAGTACTGTATGTTGATTTGGCTAAATCTAATTCAAGATCAAAACGGATGAGGACAGAGGAGGAAAGATATGGATCAGATAAGAAAGCTAAAGTCTCTATCATTCCAAGGAGTACTCCTGATCCTGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGCCATGGAAGCTTTGATAACAAAACTGTAAACGATACAGTGGCTGCAAATGTGATTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTAGGGCCAGGTTGCACTGAACAAGAGCTTATTCAAAATTTTCTGAGATGCCCGGGATTCTTAAAACTAAAAATGCAGAGCACGTATGGAGCCCCAGTTGCTTTTGTAGATTTTCAGGATACGGCCTGTTCAACTGGAGCTCTGAACCATCTGCAAGGCTCAATTCTGTACTCATCACCTCCTGGGGAGGGCATGCGATTGGA

Coding sequence (CDS)

ATGGACGACATGACGAGCTACTATCCGCCACCGCAACCACCGCCGCAGCCTTCTGGTCTTGAACCTCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCAGCACCCCCGTCTCAGCATTACCTCTCTCAACACCCGCCCACCTTCGCTTCCTATGCCTTACCTCTTTTACCTCACACAACCTCCATCAATGAGGTCCGTACCCTATTCATAGCTGGTCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGATACGAGTCCTCTCATCTTCGGACCCCCACTCAGACGACCCAGCCATTTGCATTTGCTGTATTTTCAGACCAGCAGTCTGCCGTTGGTGCAATGCATGCTGTAAATGGCATGGTGTTTGATCTTGAGAAGCAGTCAGTACTGTATGTTGATTTGGCTAAATCTAATTCAAGATCAAAACGGATGAGGACAGAGGAGGAAAGATATGGATCAGATAAGAAAGCTAAAGTCTCTATCATTCCAAGGAGTACTCCTGATCCTGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGCCATGGAAGCTTTGATAACAAAACTGTAAACGATACAGTGGCTGCAAATGTGATTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTAGGGCCAGGTTGCACTGAACAAGAGCTTATTCAAAATTTTCTGAGATGCCCGGGATTCTTAAAACTAAAAATGCAGAGCACGTATGGAGCCCCAGTTGCTTTTGTAGATTTTCAGGATACGGCCTGTTCAACTGGAGCTCTGAACCATCTGCAAGGCTCAATTCTGTACTCATCACCTCCTGGGGAGGGCATGCGATTGGA

Protein sequence

MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGCTEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLX

Homology

[Close]

BLAST of Chy2G031660 vs. ExPASy Swiss-Prot
Match: Q6ZRY4 (RNA-binding protein with multiple splicing 2 OS=Homo sapiens OX=9606 GN=RBPMS2 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.7e-14
Identity = 43/94 (45.74%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 66  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMH 125
           EVRTLF++GLP D+KPRE+Y LFR F GYE S ++   +  QP  F +F  +  A  A +
Sbjct: 29  EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKN 88

Query: 126 AVNGMVFDLEKQSVLYVDLAKSN---SRSKRMRT 157
           A+NG+ FD E    L ++ AK+N   ++SK M T
Sbjct: 89  ALNGIRFDPENPQTLRLEFAKANTKMAKSKLMAT 120

[Close]

BLAST of Chy2G031660 vs. ExPASy Swiss-Prot
Match: Q8VC52 (RNA-binding protein with multiple splicing 2 OS=Mus musculus OX=10090 GN=Rbpms2 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.7e-14
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 66  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMH 125
           EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F +F  +  A  A +
Sbjct: 23  EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKN 82

Query: 126 AVNGMVFDLEKQSVLYVDLAKSNSRSKRMR 156
           A+NG+ FD E    L ++ AK+N++  + +
Sbjct: 83  ALNGIRFDPENPQTLRLEFAKANTKMAKSK 110

[Close]

BLAST of Chy2G031660 vs. ExPASy Swiss-Prot
Match: Q6DH13 (RNA-binding protein, mRNA-processing factor 2a OS=Danio rerio OX=7955 GN=rbpms2a PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.2e-14
Identity = 43/94 (45.74%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 66  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMH 125
           EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +
Sbjct: 18  EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAKN 77

Query: 126 AVNGMVFDLEKQSVLYVDLAKSN---SRSKRMRT 157
           A+NG+ FD E    L ++ AK+N   ++SK M T
Sbjct: 78  ALNGIRFDPESPQTLRLEFAKANTKMAKSKLMAT 109

[Close]

BLAST of Chy2G031660 vs. ExPASy Swiss-Prot
Match: Q9W6I1 (RNA-binding protein with multiple splicing 2 OS=Gallus gallus OX=9031 GN=RBPMS2 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.1e-14
Identity = 43/94 (45.74%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 66  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMH 125
           EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +
Sbjct: 20  EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKN 79

Query: 126 AVNGMVFDLEKQSVLYVDLAKSN---SRSKRMRT 157
           A+NG+ FD E    L ++ AK+N   ++SK M T
Sbjct: 80  ALNGIRFDPENPQTLRLEFAKANTKMAKSKLMAT 111

[Close]

BLAST of Chy2G031660 vs. ExPASy Swiss-Prot
Match: Q9YGP5 (RNA-binding protein with multiple splicing 2 OS=Xenopus laevis OX=8355 GN=rbpms2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.1e-14
Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 66  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMH 125
           EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F ++  A  A +
Sbjct: 18  EVRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKN 77

Query: 126 AVNGMVFDLEKQSVLYVDLAKSNSR 151
           A+NG+ FD E    L ++ AK+N++
Sbjct: 78  ALNGIRFDPENPQTLRLEFAKANTK 100

[Close]

BLAST of Chy2G031660 vs. ExPASy TrEMBL
Match: A0A0A0KLD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G491040 PE=4 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 1.2e-166
Identity = 299/303 (98.68%), Postives = 299/303 (98.68%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHP TFASYALPLLPH
Sbjct: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDP- 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTEEERYGSDKKAKVSIIPRSTPDP 
Sbjct: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPA 180

Query: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240
           GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG
Sbjct: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240

Query: 241 CTEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300
           CTEQELIQ FLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Sbjct: 241 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300

Query: 301 MRL 303
           MRL
Sbjct: 301 MRL 303

[Close]

BLAST of Chy2G031660 vs. ExPASy TrEMBL
Match: A0A5D3CNE3 (U1 small nuclear ribonucleoprotein A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004640 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 2.8e-166
Identity = 296/302 (98.01%), Postives = 297/302 (98.34%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPH
Sbjct: 41  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 100

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 101 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 160

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDPG 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTE+ERYGSDKKAKVSII RSTPDPG
Sbjct: 161 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPG 220

Query: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240
           LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC
Sbjct: 221 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 280

Query: 241 TEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300
           TEQELIQ FLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Sbjct: 281 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 340

Query: 301 RL 303
           RL
Sbjct: 341 RL 342

[Close]

BLAST of Chy2G031660 vs. ExPASy TrEMBL
Match: A0A1S3B1E9 (protein WHI4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484791 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 2.8e-166
Identity = 296/302 (98.01%), Postives = 297/302 (98.34%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPH
Sbjct: 40  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 99

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 100 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 159

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDPG 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTE+ERYGSDKKAKVSII RSTPDPG
Sbjct: 160 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPG 219

Query: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240
           LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC
Sbjct: 220 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 279

Query: 241 TEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300
           TEQELIQ FLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Sbjct: 280 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 339

Query: 301 RL 303
           RL
Sbjct: 340 RL 341

[Close]

BLAST of Chy2G031660 vs. ExPASy TrEMBL
Match: A0A1S4DUH9 (U1 small nuclear ribonucleoprotein A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484791 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 6.8e-165
Identity = 296/303 (97.69%), Postives = 297/303 (98.02%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPH
Sbjct: 40  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 99

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 100 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 159

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDP- 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTE+ERYGSDKKAKVSII RSTPDP 
Sbjct: 160 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPA 219

Query: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240
           GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG
Sbjct: 220 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 279

Query: 241 CTEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300
           CTEQELIQ FLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Sbjct: 280 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 339

Query: 301 MRL 303
           MRL
Sbjct: 340 MRL 342

[Close]

BLAST of Chy2G031660 vs. ExPASy TrEMBL
Match: A0A6J1IQG5 (protein WHI4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477875 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 2.9e-155
Identity = 283/306 (92.48%), Postives = 287/306 (93.79%), Query Frame = 0


Query: 1   MDDMTSYY---PPPQPPPQPSGLEPPHYPYYQVPPPP-SAPPSQHYLSQHPPTFASYALP 60
           MDD+TSYY   P PQPP QPSGLE PHYPYYQVPPPP SAP SQHYL+QHPPTFASY LP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSD 120
            LPH  SINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR+PTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRST 180
           QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTE+ERYGSDKKAKVSI  R T
Sbjct: 121 QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEDERYGSDKKAKVSIFSRRT 180

Query: 181 PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANL 240
           PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANV PQNPPCPTLFVANL
Sbjct: 181 PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVTPQNPPCPTLFVANL 240

Query: 241 GPGCTEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP 300
           GP CTEQELIQ F RCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP
Sbjct: 241 GPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP 300

Query: 301 GEGMRL 303
           GEGMRL
Sbjct: 301 GEGMRL 306

[Close]

BLAST of Chy2G031660 vs. NCBI nr
Match: XP_011657876.1 (U1 small nuclear ribonucleoprotein A isoform X2 [Cucumis sativus])

HSP 1 Score: 598 bits (1543), Expect = 1.81e-215
Identity = 299/302 (99.01%), Postives = 299/302 (99.01%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHP TFASYALPLLPH
Sbjct: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDPG 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTEEERYGSDKKAKVSIIPRSTPDPG
Sbjct: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPG 180

Query: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240
           LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC
Sbjct: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240

Query: 241 TEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300
           TEQELIQ FLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Sbjct: 241 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300

Query: 301 RL 302
           RL
Sbjct: 301 RL 302

[Close]

BLAST of Chy2G031660 vs. NCBI nr
Match: XP_011657875.1 (U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis sativus] >KGN48541.1 hypothetical protein Csa_002833 [Cucumis sativus])

HSP 1 Score: 594 bits (1531), Expect = 1.26e-213
Identity = 299/303 (98.68%), Postives = 299/303 (98.68%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHP TFASYALPLLPH
Sbjct: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDP- 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTEEERYGSDKKAKVSIIPRSTPDP 
Sbjct: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPA 180

Query: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240
           GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG
Sbjct: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240

Query: 241 CTEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300
           CTEQELIQ FLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Sbjct: 241 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300

Query: 301 MRL 302
           MRL
Sbjct: 301 MRL 303

[Close]

BLAST of Chy2G031660 vs. NCBI nr
Match: XP_008440306.2 (PREDICTED: protein WHI4 isoform X2 [Cucumis melo])

HSP 1 Score: 593 bits (1528), Expect = 1.48e-212
Identity = 296/302 (98.01%), Postives = 297/302 (98.34%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPH
Sbjct: 40  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 99

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 100 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 159

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDPG 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTE+ERYGSDKKAKVSII RSTPDPG
Sbjct: 160 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPG 219

Query: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240
           LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC
Sbjct: 220 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 279

Query: 241 TEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300
           TEQELIQ FLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Sbjct: 280 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 339

Query: 301 RL 302
           RL
Sbjct: 340 RL 341

[Close]

BLAST of Chy2G031660 vs. NCBI nr
Match: TYK12872.1 (U1 small nuclear ribonucleoprotein A isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 593 bits (1528), Expect = 1.98e-212
Identity = 296/302 (98.01%), Postives = 297/302 (98.34%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPH
Sbjct: 41  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 100

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 101 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 160

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDPG 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTE+ERYGSDKKAKVSII RSTPDPG
Sbjct: 161 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPG 220

Query: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240
           LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC
Sbjct: 221 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 280

Query: 241 TEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300
           TEQELIQ FLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Sbjct: 281 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 340

Query: 301 RL 302
           RL
Sbjct: 341 RL 342

[Close]

BLAST of Chy2G031660 vs. NCBI nr
Match: XP_016899375.1 (PREDICTED: U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis melo])

HSP 1 Score: 588 bits (1516), Expect = 1.03e-210
Identity = 296/303 (97.69%), Postives = 297/303 (98.02%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPH
Sbjct: 40  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 99

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 100 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 159

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDP- 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKR RTE+ERYGSDKKAKVSII RSTPDP 
Sbjct: 160 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPA 219

Query: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240
           GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG
Sbjct: 220 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 279

Query: 241 CTEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300
           CTEQELIQ FLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Sbjct: 280 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 339

Query: 301 MRL 302
           MRL
Sbjct: 340 MRL 342

[Close]

BLAST of Chy2G031660 vs. TAIR 10
Match: AT2G42240.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 273.1 bits (697), Expect = 2.7e-73
Identity = 164/306 (53.59%), Postives = 199/306 (65.03%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHY--PYYQVPPPPSAPPSQHYLSQHPPTFASYALPLL 60
           MDD+ +YY               HY  P    PPPP   P         P  +++++ L 
Sbjct: 1   MDDLEAYY--------------SHYNLPAMVPPPPPGVSPI--------PITSAHSVYLP 60

Query: 61  PHTT--SINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSD 120
            H +  + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLR+ +   +PFAFAVFSD
Sbjct: 61  THVSIGARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRS-SDGAKPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRST 180
            QSAV  MHA+NGMVFDLEK S L++DLAKSN +SKR RT ++ + S KK K      +T
Sbjct: 121 LQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRT-DDGWESLKKLKSW---NTT 180

Query: 181 PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANL 240
            + G GS    GM +SAYNTIGY  AQS G   N       +        PCPTLF+AN+
Sbjct: 181 TESGFGSFQTPGMSSSAYNTIGYSPAQSQG-IANVAGRAPTSRKPSKAADPCPTLFIANM 240

Query: 241 GPGCTEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP 300
           GP CTE ELIQ F RC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQG++LYSS  
Sbjct: 241 GPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLT 278

Query: 301 GEGMRL 303
           GE +RL
Sbjct: 301 GEVLRL 278

[Close]

BLAST of Chy2G031660 vs. TAIR 10
Match: AT2G42240.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 273.1 bits (697), Expect = 2.7e-73
Identity = 164/306 (53.59%), Postives = 199/306 (65.03%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHY--PYYQVPPPPSAPPSQHYLSQHPPTFASYALPLL 60
           MDD+ +YY               HY  P    PPPP   P         P  +++++ L 
Sbjct: 1   MDDLEAYY--------------SHYNLPAMVPPPPPGVSPI--------PITSAHSVYLP 60

Query: 61  PHTT--SINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSD 120
            H +  + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLR+ +   +PFAFAVFSD
Sbjct: 61  THVSIGARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRS-SDGAKPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRST 180
            QSAV  MHA+NGMVFDLEK S L++DLAKSN +SKR RT ++ + S KK K      +T
Sbjct: 121 LQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRT-DDGWESLKKLKSW---NTT 180

Query: 181 PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANL 240
            + G GS    GM +SAYNTIGY  AQS G   N       +        PCPTLF+AN+
Sbjct: 181 TESGFGSFQTPGMSSSAYNTIGYSPAQSQG-IANVAGRAPTSRKPSKAADPCPTLFIANM 240

Query: 241 GPGCTEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP 300
           GP CTE ELIQ F RC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQG++LYSS  
Sbjct: 241 GPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLT 278

Query: 301 GEGMRL 303
           GE +RL
Sbjct: 301 GEVLRL 278

[Close]

BLAST of Chy2G031660 vs. TAIR 10
Match: AT2G42240.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 273.1 bits (697), Expect = 2.7e-73
Identity = 164/306 (53.59%), Postives = 199/306 (65.03%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHY--PYYQVPPPPSAPPSQHYLSQHPPTFASYALPLL 60
           MDD+ +YY               HY  P    PPPP   P         P  +++++ L 
Sbjct: 1   MDDLEAYY--------------SHYNLPAMVPPPPPGVSPI--------PITSAHSVYLP 60

Query: 61  PHTT--SINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSD 120
            H +  + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLR+ +   +PFAFAVFSD
Sbjct: 61  THVSIGARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRS-SDGAKPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRST 180
            QSAV  MHA+NGMVFDLEK S L++DLAKSN +SKR RT ++ + S KK K      +T
Sbjct: 121 LQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRT-DDGWESLKKLKSW---NTT 180

Query: 181 PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANL 240
            + G GS    GM +SAYNTIGY  AQS G   N       +        PCPTLF+AN+
Sbjct: 181 TESGFGSFQTPGMSSSAYNTIGYSPAQSQG-IANVAGRAPTSRKPSKAADPCPTLFIANM 240

Query: 241 GPGCTEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP 300
           GP CTE ELIQ F RC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQG++LYSS  
Sbjct: 241 GPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLT 278

Query: 301 GEGMRL 303
           GE +RL
Sbjct: 301 GEVLRL 278

[Close]

BLAST of Chy2G031660 vs. TAIR 10
Match: AT3G13700.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 136.3 bits (342), Expect = 4.0e-32
Identity = 106/301 (35.22%), Postives = 145/301 (48.17%), Query Frame = 0


Query: 23  PHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPR 82
           P Y Y     P   PP    L+  P                   + TLF++GLP DVK R
Sbjct: 9   PFYVYQLHSHPHHLPPQLPLLADEP-----------------GAINTLFVSGLPNDVKAR 68

Query: 83  EIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVNGMVFDLEKQSVLYV 142
           EI+NLFR   G+ES  L+   +  Q  AFA F+  + A+ AM+ +NG+ FD +  S L++
Sbjct: 69  EIHNLFRRRHGFESCQLKYTGRGDQVVAFATFTSHRFALAAMNELNGVKFDPQTGSNLHI 128

Query: 143 DLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDPGLGSTHMSGMGNSAYNTIGYPSA 202
           +LA+SNSR K      ER GS       +I     +        S  G+S  + +     
Sbjct: 129 ELARSNSRRK------ERPGS---GPYVVIDNRNKEISKSQDDQSDEGDSDPDEV----- 188

Query: 203 QSHGSFDNKTVNDTV--AANVIPQNP-------------------PCPTLFVANLGPGCT 262
           Q  G+ D+   NDT    A+  P +                     C TLF+ANLGP CT
Sbjct: 189 QEPGNSDSPKENDTTKSEADSEPDSKAPSANGHLEKASEGGSGARACSTLFIANLGPNCT 248

Query: 263 EQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMR 303
           E EL Q   R PGF  LK+++  G PVAF DF++   +T A+NHLQG++L SS  G GM 
Sbjct: 249 EDELKQLLSRYPGFHILKIRARGGMPVAFADFEEIEQATDAMNHLQGNLLSSSDRG-GMH 277

[Close]

BLAST of Chy2G031660 vs. TAIR 10
Match: AT3G13700.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 125.6 bits (314), Expect = 7.0e-29
Identity = 106/319 (33.23%), Postives = 144/319 (45.14%), Query Frame = 0


Query: 23  PHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPR 82
           P Y Y     P   PP    L+  P                   + TLF++GLP DVK R
Sbjct: 9   PFYVYQLHSHPHHLPPQLPLLADEP-----------------GAINTLFVSGLPNDVKAR 68

Query: 83  EIYNLFREFPGYESSHLR------------------TPTQTTQPFAFAVFSDQQSAVGAM 142
           EI+NLFR   G+ES  L+                   P       AFA F+  + A+ AM
Sbjct: 69  EIHNLFRRRHGFESCQLKYTGRGDQVCKNLQFLFFFIPIFRKAVVAFATFTSHRFALAAM 128

Query: 143 HAVNGMVFDLEKQSVLYVDLAKSNSRSKRMRTEEERYGSDKKAKVSIIPRSTPDPGLGST 202
           + +NG+ FD +  S L+++LA+SNSR K      ER GS       +I     +      
Sbjct: 129 NELNGVKFDPQTGSNLHIELARSNSRRK------ERPGS---GPYVVIDNRNKEISKSQD 188

Query: 203 HMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTV--AANVIPQNP---------------- 262
             S  G+S  + +     Q  G+ D+   NDT    A+  P +                 
Sbjct: 189 DQSDEGDSDPDEV-----QEPGNSDSPKENDTTKSEADSEPDSKAPSANGHLEKASEGGS 248

Query: 263 ---PCPTLFVANLGPGCTEQELIQNFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAL 303
               C TLF+ANLGP CTE EL Q   R PGF  LK+++  G PVAF DF++   +T A+
Sbjct: 249 GARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRARGGMPVAFADFEEIEQATDAM 295

The following BLAST results are available for this feature:

BLAST of Chy2G031660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ZRY4	4.7e-14	45.74	RNA-binding protein with multiple splicing 2 OS=Homo sapiens OX=9606 GN=RBPMS2 P...	[more]
Q8VC52	4.7e-14	43.33	RNA-binding protein with multiple splicing 2 OS=Mus musculus OX=10090 GN=Rbpms2 ...	[more]
Q6DH13	6.2e-14	45.74	RNA-binding protein, mRNA-processing factor 2a OS=Danio rerio OX=7955 GN=rbpms2a...	[more]
Q9W6I1	8.1e-14	45.74	RNA-binding protein with multiple splicing 2 OS=Gallus gallus OX=9031 GN=RBPMS2 ...	[more]
Q9YGP5	8.1e-14	45.88	RNA-binding protein with multiple splicing 2 OS=Xenopus laevis OX=8355 GN=rbpms2...	[more]

BLAST of Chy2G031660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLD8	1.2e-166	98.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G491040 PE=4 SV=1	[more]
A0A5D3CNE3	2.8e-166	98.01	U1 small nuclear ribonucleoprotein A isoform X2 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B1E9	2.8e-166	98.01	protein WHI4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484791 PE=4 SV=1	[more]
A0A1S4DUH9	6.8e-165	97.69	U1 small nuclear ribonucleoprotein A isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1IQG5	2.9e-155	92.48	protein WHI4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477875 PE=4 SV=1	[more]

BLAST of Chy2G031660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657876.1	1.81e-215	99.01	U1 small nuclear ribonucleoprotein A isoform X2 [Cucumis sativus]	[more]
XP_011657875.1	1.26e-213	98.68	U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis sativus] >KGN48541.1 hy...	[more]
XP_008440306.2	1.48e-212	98.01	PREDICTED: protein WHI4 isoform X2 [Cucumis melo]	[more]
TYK12872.1	1.98e-212	98.01	U1 small nuclear ribonucleoprotein A isoform X2 [Cucumis melo var. makuwa]	[more]
XP_016899375.1	1.03e-210	97.69	PREDICTED: U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis melo]	[more]

BLAST of Chy2G031660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42240.1	2.7e-73	53.59	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G42240.2	2.7e-73	53.59	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G42240.3	2.7e-73	53.59	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13700.2	4.0e-32	35.22	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13700.1	7.0e-29	33.23	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 230..299 e-value: 0.015 score: 22.9 coord: 69..141 e-value: 4.0E-8 score: 43.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 70..133 e-value: 4.6E-10 score: 39.2 coord: 231..293 e-value: 2.4E-6 score: 27.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 229..302 score: 9.626806
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 68..147 score: 12.236282
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 218..302 e-value: 2.9E-13 score: 51.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 64..157 e-value: 1.1E-20 score: 75.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..180
None	No IPR available	PANTHER	PTHR10501	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	coord: 1..297
None	No IPR available	PANTHER	PTHR10501:SF43	RNA-BINDING PROTEIN-RELATED	coord: 1..297
None	No IPR available	CDD	cd12420	RRM_RBPMS_like	coord: 68..143 e-value: 1.334E-30 score: 108.511
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 67..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G031660.1	Chy2G031660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding