Chy2G031230 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G031230
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	ribonuclease III domain-containing protein RNC1, chloroplastic
Location	chrH02: 5481428 .. 5485113 (+)
RNA-Seq Expression	Chy2G031230
Synteny	Chy2G031230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTTTCTTCTTCTTTTGTTAAACTCTCATCCCCTTCTCCTAATTACTCTTTCTCATCTTCTTTAACCCCATTTATCGTTAAAATTCACCCCAATCATCCCATTTTCCCCAACCCCTCGTCGGCTAATTTGCGTATTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAGACTGCTCAAAGAGCTAGCGGAGCGAAAACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAGAGATTAGCGGAAAGGTTTCTTAATAGCCCTCAATTAACTCTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCGCGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTGCTGGAAGCTAAGCAAGCCCTTGGATATCCTCTTGAGCCATCCGATAGTTATGGAGACGACAATCCTGCGAAACAATTTGATACTTTGTTGTACTTGGCCTTTCAGCATCCCTCATGCGAAAGGACCAAGGCCCGGCACATAAGATCGGGGCATTCAAGGCTCTTTTTTTTGGGCCAATATGTACTCGAATTGGCGTTGGCGGAGTATTTTCTTCAGAGGTATCCTAGGGAATCGCCTGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCCAGTTTACAGAATTTGATATTCCCATATGATGACATGGACAAGATAATTAGGAAGGACCGGGAACCACCAGTGAAGTAAGTTTGGTATTGTCTTTTAATTCGTTCTAGTTGTTTTTTCCCATTGTAAATAATTATGTGAATAAGATAACTGTAAGAGATGTTTTTTGTTGGAAAGTTATGTCACTGATATGTTAAACCCCATTTTAAGTTTTAGAAGAATCACAGAATGTGGTATCATCATGAGCAGACTGAAATGTACCAAATGCTTTATGGAAGTTGATTGTGCAATATGATGGTAATGTAATGTATAGTTTCACTAGGAACTCGGATTTCTGGGCCAGAAGAGACATTAGGAAGTTGGCATTTCATTAGGATAAACGTTGAAGGCATGCTCCTGGTAATCTAAAGTTAAGTAGCTTAGATATGGCAGTCGTGGACACTGAGCTTCTTTATATAGATGGTCCCCAATTCGTGAAGATGACGCTACAAAAGATCAGCTAAGAGACAATGCTAAGGAAGTTGTTCCATTGGGAATGTTGCACAAAACCTTGATTAAGAAATTTTATATATAGGTGGTTCGGTGCCATGGGGTGAATTATTTGTGAACCTGAACTTTGCTGAACCTAGCACCAGACATTCTTTCCTCAAATCTAGTACCTGCAGACCATGTAGTCCACTTCATGAATCTGCTTCCTTACTAATTTGTCCATCCTTCACAAACTTGCTTCCAGGCTACTATGATTACATTTACCAACATGGCTTTCCGTTTGCCTCTATTTGGCAAATGTAGCTTTTATACCACTTGTCACGTGTCAAATTTGTGGTAAATAGTTGGCCCTGTGAGACTTGCTATTCTATTGGGGGAATTGGGAGATTCGATTTTCTTTACCCACTCTACTTATGGACTTCGTTTGTAGGTCCTGTCTTTGTTTGCAATATTCATCAAATTCATGTTTTAGTATGATGCAAGATGTACTATAGGTTACGTAGTGAAATGTGTGGTGTTTCAAAATTCATTTAACTTCTGATTAGCCTATGGGATACCTGATATAACTTTTTTTTTTTCATTTTTGTTTTCCTTTCATTTTGTGTTCTTTCTTAATTCTTGTTACCGATACCCTGACAGCATCAAGGGTTGGAAAGAAAATGCTAGATATAAATTGTGGGTGTATTTTACATCATATCATGGTATTACTTTCTGTTGCATTTCTGGTGGACTATCTTGGACTCAATTGGTAAATTAGTAGCTTAGACTTGGGAATAAAACTTCTGCTGATTCTCTTTCTAAAATAGTTTGGTTCAGTATACTATTTCAACAATGTGAGCCTAAAATTAATTTTCTTTGAGCAGATCTGTATTTTGGGCTTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTACCGGGTCCTTTTTGAGGTATTCGGAATGGATCCAGATGCAAAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGATTATGTTTCTGTTGAATTTGAGGACAAAAGGATCGGCTGGCAAGATATGGTCTCCTATAAGGTCAGTTTCATGTTTTTTTTAACAGCACAGTAAACTATTTTTCTATTATTTATCCTTCTTAATAATGAAATCCACTCTTGTAATTGTGTTCCTTCTCTCATTTTTCAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTTCGAGCTTGTGTCCCACCTGGCATGCATCGATTCCGAGGTAATATATGGGATTACGATAGCCGACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTACTGATAAAATTCCTGACATCACGGAAGCAAGAAATATTGAACTTGGACTTGGACTGCAGGTATTGCCCACCCCACACACACACGACTTTTCTTCTCTCGTTCATAACCACGTGATGATCGTATTATTATACATTCTCAATGTCAGTTTTCATTGTCTTGTATGTGTGGATGTGTTTATCAGCGTGATGGCTTGAACTTTGTTATATCTTACGCGTGAAGGAGGATAATTAAGGCTTCGTTTAGTAACCATTTGATTTTTGTTTTTAGTTTTTAAAAATTAAGTCTATTTTCTTCTATTTTCTTCTAATTTCTTACGATGATTTGAATCTTTCTTCACTTAAAAGTTCAATTCTAACAAGTTTTTCTTTAGTTTTCAAAATTTGGTGTGACATTTTGAAACAAATAAGGTAAATTTATAGGTGGAATGATTGTTTATAGGTTTAATTTTTTAAAACGGAAAACCAACAATTACCAAATAGGCCTAATGCATGTAGTGTTGAATTTCTGCTTGCTTGATATTATTCAACGATTCAATATAATGGTCTTAACTTTTAAGTACCTTTTTAGGCTATATGTAAAATCTGTGGAACAGCATGATCAAGCTAATCTCAGGAAATTTCTTAATCAAATGCAGCTTTGTTTTTTGCACCCATCAAAACACAAGTTTGAGCATCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGTACGACCCTTTCTTACATTTATTAGGGAGGACGTACTACTTTCTCTCTATCAAAATCCTATCCTTGATGTTTGGATCAAGCAACTAACTTATGGTGGTCGGTCCTATTGTGTTTTGTTCAAGGATATCGTAATGGCCGAGAGACTGTTAATGAAACATTTAGATGCTCCTGGAAGGTGGTTGCAGGTGAAGCACCGGCGATTACTCATGAACAAGTTTTGTGGACGGTATTTGAGGGAAAGATATCTTCATAAACTTATCATCTATTCTGAAAAAGTTCAAGATGCATACGAGAACAATCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCGTATGTAGTTTATGGAAAGCCTGATGTGAGACGTATCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGA

mRNA sequence

ATGGAACTTTCTTCTTCTTTTGTTAAACTCTCATCCCCTTCTCCTAATTACTCTTTCTCATCTTCTTTAACCCCATTTATCGTTAAAATTCACCCCAATCATCCCATTTTCCCCAACCCCTCGTCGGCTAATTTGCGTATTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAGACTGCTCAAAGAGCTAGCGGAGCGAAAACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAGAGATTAGCGGAAAGGTTTCTTAATAGCCCTCAATTAACTCTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCGCGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTGCTGGAAGCTAAGCAAGCCCTTGGATATCCTCTTGAGCCATCCGATAGTTATGGAGACGACAATCCTGCGAAACAATTTGATACTTTGTTGTACTTGGCCTTTCAGCATCCCTCATGCGAAAGGACCAAGGCCCGGCACATAAGATCGGGGCATTCAAGGCTCTTTTTTTTGGGCCAATATGTACTCGAATTGGCGTTGGCGGAGTATTTTCTTCAGAGGTATCCTAGGGAATCGCCTGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCCAGTTTACAGAATTTGATATTCCCATATGATGACATGGACAAGATAATTAGGAAGGACCGGGAACCACCAGTGAAATCTGTATTTTGGGCTTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTACCGGGTCCTTTTTGAGGTATTCGGAATGGATCCAGATGCAAAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGATTATGTTTCTGTTGAATTTGAGGACAAAAGGATCGGCTGGCAAGATATGGTCTCCTATAAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTTCGAGCTTGTGTCCCACCTGGCATGCATCGATTCCGAGGTAATATATGGGATTACGATAGCCGACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTACTGATAAAATTCCTGACATCACGGAAGCAAGAAATATTGAACTTGGACTTGGACTGCAGCTTTGTTTTTTGCACCCATCAAAACACAAGTTTGAGCATCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGATATCGTAATGGCCGAGAGACTGTTAATGAAACATTTAGATGCTCCTGGAAGGTGGTTGCAGGTGAAGCACCGGCGATTACTCATGAACAAGTTTTGTGGACGGTATTTGAGGGAAAGATATCTTCATAAACTTATCATCTATTCTGAAAAAGTTCAAGATGCATACGAGAACAATCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCGTATGTAGTTTATGGAAAGCCTGATGTGAGACGTATCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGA

Coding sequence (CDS)

ATGGAACTTTCTTCTTCTTTTGTTAAACTCTCATCCCCTTCTCCTAATTACTCTTTCTCATCTTCTTTAACCCCATTTATCGTTAAAATTCACCCCAATCATCCCATTTTCCCCAACCCCTCGTCGGCTAATTTGCGTATTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAGACTGCTCAAAGAGCTAGCGGAGCGAAAACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAGAGATTAGCGGAAAGGTTTCTTAATAGCCCTCAATTAACTCTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCGCGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTGCTGGAAGCTAAGCAAGCCCTTGGATATCCTCTTGAGCCATCCGATAGTTATGGAGACGACAATCCTGCGAAACAATTTGATACTTTGTTGTACTTGGCCTTTCAGCATCCCTCATGCGAAAGGACCAAGGCCCGGCACATAAGATCGGGGCATTCAAGGCTCTTTTTTTTGGGCCAATATGTACTCGAATTGGCGTTGGCGGAGTATTTTCTTCAGAGGTATCCTAGGGAATCGCCTGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCCAGTTTACAGAATTTGATATTCCCATATGATGACATGGACAAGATAATTAGGAAGGACCGGGAACCACCAGTGAAATCTGTATTTTGGGCTTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTACCGGGTCCTTTTTGAGGTATTCGGAATGGATCCAGATGCAAAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGATTATGTTTCTGTTGAATTTGAGGACAAAAGGATCGGCTGGCAAGATATGGTCTCCTATAAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTTCGAGCTTGTGTCCCACCTGGCATGCATCGATTCCGAGGTAATATATGGGATTACGATAGCCGACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTACTGATAAAATTCCTGACATCACGGAAGCAAGAAATATTGAACTTGGACTTGGACTGCAGCTTTGTTTTTTGCACCCATCAAAACACAAGTTTGAGCATCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGATATCGTAATGGCCGAGAGACTGTTAATGAAACATTTAGATGCTCCTGGAAGGTGGTTGCAGGTGAAGCACCGGCGATTACTCATGAACAAGTTTTGTGGACGGTATTTGAGGGAAAGATATCTTCATAAACTTATCATCTATTCTGAAAAAGTTCAAGATGCATACGAGAACAATCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCGTATGTAGTTTATGGAAAGCCTGATGTGAGACGTATCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGA

Protein sequence

MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV*

Homology

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BLAST of Chy2G031230 vs. ExPASy Swiss-Prot
Match: Q9SZV0 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RNC1 PE=2 SV=1)

HSP 1 Score: 902.1 bits (2330), Expect = 3.0e-261
Identity = 432/532 (81.20%), Postives = 478/532 (89.85%), Query Frame = 0


Query: 4   SSSFVKL-SSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPKNN 63
           SSS +++ SS +P  SFSSS++ F  K      I       NLRI A      Q LP+++
Sbjct: 9   SSSLLRICSSSAPEISFSSSISQFPSK---TQSILTKSRFQNLRICASVTAETQGLPRDS 68

Query: 64  PQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCLP 123
           PQRLLKELA+RK AT PKKKVPP+RFILRPPLDDK+LAERFLNSPQL+LKSFPLLSSCLP
Sbjct: 69  PQRLLKELAQRKTATGPKKKVPPKRFILRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLP 128

Query: 124 SSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKA 183
           SS+LNNADKTW+DEYLLE KQALGY LEPS+S GDDNPAK FDTLLYLAFQHPSC+R +A
Sbjct: 129 SSKLNNADKTWIDEYLLEVKQALGYSLEPSESLGDDNPAKHFDTLLYLAFQHPSCDRARA 188

Query: 184 RHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASL 243
           RH+++GHSRL+FLGQYVLELAL E+FLQRYPRESPGPMRERVFALIGKR LPKWIKAASL
Sbjct: 189 RHVKNGHSRLWFLGQYVLELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASL 248

Query: 244 QNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECE 303
           QNLIFPYDDMDK+IRK+REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA EC+
Sbjct: 249 QNLIFPYDDMDKLIRKEREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDADECQ 308

Query: 304 PRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIW 363
           PR RRQLEDVDYVSVEFE K++GWQD+ +YKPPEDALFAHPRLFRACVPPGMHRFRGNIW
Sbjct: 309 PRSRRQLEDVDYVSVEFEGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGNIW 368

Query: 364 DYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLE 423
           D+DS+P+VMQ LGYPL + D+I +ITEARNIELGLGLQLCFLHPSKHKFEHPRFC+ERLE
Sbjct: 369 DFDSKPKVMQTLGYPLTMNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFERLE 428

Query: 424 YLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQ 483
           Y+GQKIQDI MAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+ LH  IIYSE+V 
Sbjct: 429 YVGQKIQDIAMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEEVH 488

Query: 484 DAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 535
           D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 489 DRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537

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BLAST of Chy2G031230 vs. ExPASy Swiss-Prot
Match: Q8S1Z0 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RNC1 PE=2 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 9.3e-239
Identity = 388/505 (76.83%), Postives = 444/505 (87.92%), Query Frame = 0


Query: 45  LRIFAVAVD---------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLD 104
           +R+ AVA D              P N+P RLL+ELAERK+A SPKKK PPRRFIL+PPLD
Sbjct: 29  VRVLAVAADHTPPPPPSPSSPPEPANSPSRLLRELAERKKAVSPKKKHPPRRFILKPPLD 88

Query: 105 DKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSY 164
           D+RL +RFL+SPQL+LK+ PLLSSCLPS+ L+ AD+TWMDEYLLEAKQALGYPL PS++ 
Sbjct: 89  DERLTQRFLSSPQLSLKALPLLSSCLPSAPLSAADRTWMDEYLLEAKQALGYPLAPSETL 148

Query: 165 GDDN----PAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLFFLGQYVLELALAEYFL 224
           GD +    PA+ FD LLYLAFQH   SCERT+ RH+RSGHSRL+FLGQYVLELA  E+FL
Sbjct: 149 GDGDDDGCPARHFDVLLYLAFQHLDTSCERTRTRHVRSGHSRLWFLGQYVLELAFCEFFL 208

Query: 225 QRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFW 284
           QRYPRESPGPMRERVFALIGKR +PKWIKAASL NL+FPYDD+DK+IRKDREPP K+VFW
Sbjct: 209 QRYPRESPGPMRERVFALIGKRAIPKWIKAASLHNLVFPYDDLDKMIRKDREPPAKAVFW 268

Query: 285 ALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFEDKRIGWQDM 344
           ALFGAIYLCFGMPEVYRVLFE FGMDP+ + C+P+LRRQLEDVDYVSVEFE +++ WQD+
Sbjct: 269 ALFGAIYLCFGMPEVYRVLFEAFGMDPEDESCQPKLRRQLEDVDYVSVEFEKRQLTWQDV 328

Query: 345 VSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITE 404
            +Y+PP DALFAHPRLFRACVPPGMHRFRGNIWD+D+RP+VM  LGYPLP+ D+IP+ITE
Sbjct: 329 AAYRPPPDALFAHPRLFRACVPPGMHRFRGNIWDFDNRPKVMNTLGYPLPMNDRIPEITE 388

Query: 405 ARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWL 464
           ARNIELGLGLQLCFLHPSKHKFEHPRFC ERLEY+GQKIQD+VMAERLLMKHLDAPGRWL
Sbjct: 389 ARNIELGLGLQLCFLHPSKHKFEHPRFCLERLEYVGQKIQDLVMAERLLMKHLDAPGRWL 448

Query: 465 QVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYV 524
             KHRRLLMNK+CGRYLR+++LH  IIY E VQD +E+NRRLRNP+TTAVQQA+HGL+Y 
Sbjct: 449 AEKHRRLLMNKYCGRYLRDKHLHHYIIYGESVQDRFEHNRRLRNPSTTAVQQAIHGLAYC 508

Query: 525 VYGKPDVRRIMFEVFDFEQIQPKAV 535
           VYGKPDVRR+MFEVFDFEQ+QPKAV
Sbjct: 509 VYGKPDVRRLMFEVFDFEQVQPKAV 533

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BLAST of Chy2G031230 vs. ExPASy Swiss-Prot
Match: A6YSL1 (Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Zea mays OX=4577 GN=RNC1 PE=1 SV=1)

HSP 1 Score: 825.9 bits (2132), Expect = 2.7e-238
Identity = 392/523 (74.95%), Postives = 451/523 (86.23%), Query Frame = 0


Query: 22  SLTPFIVKIHPNHPIFPNPSSANLRIFAVAVD------PQQELPKNNPQRLLKELAERKR 81
           +LTP    +H         SS  +R+ AVA D      P  E P N+P RLL+ELA+RK+
Sbjct: 12  TLTPLPFSLH--------SSSRRVRVLAVAADQTPPPAPPSE-PANSPSRLLRELAQRKK 71

Query: 82  ATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMD 141
           A SPKKK PPRRFIL+PPLDD+RL  RFL+SPQL+LK+ PLLSSCLPS+ L+ AD+TWMD
Sbjct: 72  AVSPKKKHPPRRFILKPPLDDERLTRRFLSSPQLSLKALPLLSSCLPSAPLSTADRTWMD 131

Query: 142 EYLLEAKQALGYPLEPSDSY--GDDNPAKQFDTLLYLAFQH--PSCERTKARHIRSGHSR 201
           EYLLEAKQALGYPL PS++   GDD PA+ FD L YLAFQH  PS ERT+ RH+R+GHSR
Sbjct: 132 EYLLEAKQALGYPLAPSETLGEGDDCPARHFDVLFYLAFQHLDPSSERTRMRHVRNGHSR 191

Query: 202 LFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDD 261
           L+FLGQYVLELA  E+FLQRYPRESPGPMRERVFALIGK+ LP+W+KAASL NL+FPYDD
Sbjct: 192 LWFLGQYVLELAFCEFFLQRYPRESPGPMRERVFALIGKKVLPRWLKAASLHNLVFPYDD 251

Query: 262 MDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLED 321
           +DK+IRKDREPP K+VFWA+FGAIYLCFGMPEVYRVLFE FGMDPD + C+P+LRRQLED
Sbjct: 252 LDKMIRKDREPPSKAVFWAIFGAIYLCFGMPEVYRVLFEAFGMDPDDESCQPKLRRQLED 311

Query: 322 VDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVM 381
           VDYVSVEFE +++ WQD+ +Y+PP DALFAHPRLFRACVPPGMHRFRGNIWD+DSRP+VM
Sbjct: 312 VDYVSVEFEKRQLTWQDVAAYRPPPDALFAHPRLFRACVPPGMHRFRGNIWDFDSRPKVM 371

Query: 382 QALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDI 441
             LGYPLP+ D+IP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEY+GQKIQD+
Sbjct: 372 TTLGYPLPMNDRIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYVGQKIQDL 431

Query: 442 VMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRL 501
           VMAERLLMKHLDAPGRWL  KHRR LMNK+CGRYLR+++L   IIY E VQD +E+NRRL
Sbjct: 432 VMAERLLMKHLDAPGRWLAEKHRRTLMNKYCGRYLRDKHLQHYIIYGETVQDRFEHNRRL 491

Query: 502 RNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 535
           RNP+TT+VQQALHGL+Y VYGKPDVRR+MFEVFDFEQ+QPKAV
Sbjct: 492 RNPSTTSVQQALHGLAYCVYGKPDVRRLMFEVFDFEQVQPKAV 525

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BLAST of Chy2G031230 vs. ExPASy Swiss-Prot
Match: Q5L0Q3 (Ribonuclease 3 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rnc PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 9.6e-10
Identity = 40/124 (32.26%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 165 DTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERV 224
           + LL  AF H S      R +   + RL FLG  VLEL +++Y  Q++P  S G + +  
Sbjct: 32  EKLLIQAFTHSSYVNEHRRRLHEDNERLEFLGDAVLELTVSQYLFQKFPHMSEGQLTKLR 91

Query: 225 FALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEV 284
            A++ + +L K+  A S   L+      +    + R   +  VF A  GA+YL  GM  V
Sbjct: 92  AAIVCEPSLVKFANALSFGELVLLGKGEELTGGRTRPALLADVFEAFIGALYLDQGMDAV 151

Query: 285 YRVL 289
            R L
Sbjct: 152 IRFL 155

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BLAST of Chy2G031230 vs. ExPASy Swiss-Prot
Match: A4IM67 (Ribonuclease 3 OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=rnc PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.3e-09
Identity = 41/126 (32.54%), Postives = 60/126 (47.62%), Query Frame = 0


Query: 163 QFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRE 222
           Q + LL  AF H S      R     + RL FLG  VLEL +++Y  Q++P  S G + +
Sbjct: 30  QNEKLLIQAFTHSSYVNEHRRRFHEDNERLEFLGDAVLELTVSQYLFQKFPHMSEGQLTK 89

Query: 223 RVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMP 282
              A++ + +L K+  A S   L+      +    + R   +  VF A  GA+YL  GM 
Sbjct: 90  LRAAIVCEPSLVKFANALSFGELVLLGKGEELTGGRTRPALLADVFEAFIGALYLDQGMD 149

Query: 283 EVYRVL 289
            V R L
Sbjct: 150 VVLRFL 155

[Close]

BLAST of Chy2G031230 vs. ExPASy TrEMBL
Match: A0A0A0KGG7 (RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G494980 PE=4 SV=1)

HSP 1 Score: 1092.8 bits (2825), Expect = 0.0e+00
Identity = 532/534 (99.63%), Postives = 533/534 (99.81%), Query Frame = 0


Query: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
           MELSSSFVKLSSPS NYSFSSSLTPFIVKIHPNHPIFPNPSSANLR+FAVAVDPQQELPK
Sbjct: 1   MELSSSFVKLSSPS-NYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPK 60

Query: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
           NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC
Sbjct: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120

Query: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
           LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
           KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA
Sbjct: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240

Query: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300
           SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
Sbjct: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300

Query: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360
           CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420
           IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER
Sbjct: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480
           LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK
Sbjct: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480

Query: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 535
           VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
Sbjct: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 533

[Close]

BLAST of Chy2G031230 vs. ExPASy TrEMBL
Match: A0A1S3B1J9 (ribonuclease III domain-containing protein RNC1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484834 PE=4 SV=1)

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 519/534 (97.19%), Postives = 528/534 (98.88%), Query Frame = 0


Query: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
           MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSS NLRIFAVAVDPQQELPK
Sbjct: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSGNLRIFAVAVDPQQELPK 60

Query: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
           NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSC
Sbjct: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120

Query: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
           LPSSRLNNADKTWMDEYLLEAKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
           KARHIRSGHSRL FLGQYV+ELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAA 240

Query: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300
           SLQNLIFPYDDMDK+IRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Sbjct: 241 SLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEE 300

Query: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360
           CEPRLRRQLEDVDYVSVEFEDKRI WQDM+SYKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301 CEPRLRRQLEDVDYVSVEFEDKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420
           IWDYDSRPQVMQALGYPLPV DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER
Sbjct: 361 IWDYDSRPQVMQALGYPLPVVDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480
           LEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEK
Sbjct: 421 LEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEK 480

Query: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 535
           VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Chy2G031230 vs. ExPASy TrEMBL
Match: A0A6J1BVK6 (ribonuclease III domain-containing protein RNC1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005910 PE=4 SV=1)

HSP 1 Score: 1057.0 bits (2732), Expect = 2.7e-305
Identity = 507/534 (94.94%), Postives = 526/534 (98.50%), Query Frame = 0


Query: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
           MELSSSFV+L+SP+PNYSFSSSLTPF  KI+PN+P FPNP+S NLRIFAVAVDPQQELPK
Sbjct: 1   MELSSSFVQLASPTPNYSFSSSLTPFHFKIYPNNPSFPNPTSGNLRIFAVAVDPQQELPK 60

Query: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
           NNPQRLLKELAERKRATSPKK+VPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSC
Sbjct: 61  NNPQRLLKELAERKRATSPKKRVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120

Query: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
           LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSD+YGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDNYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
           KARHIRSGHSRL FLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKR+LPKWIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRSLPKWIKAA 240

Query: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300
           SLQNLIFPYDDMDK+IRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Sbjct: 241 SLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEE 300

Query: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360
           CEPRLRRQLEDVDYVSVEFEDK+I WQDMV+YKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301 CEPRLRRQLEDVDYVSVEFEDKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420
           IWDYDSRPQVMQALGYP+PV+DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER
Sbjct: 361 IWDYDSRPQVMQALGYPVPVSDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480
           LEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEK
Sbjct: 421 LEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEK 480

Query: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 535
           VQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 481 VQDAYENNRRLRNPATTAVQQALHGLSYAVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Chy2G031230 vs. ExPASy TrEMBL
Match: A0A6J1GEC3 (ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453180 PE=4 SV=1)

HSP 1 Score: 1053.9 bits (2724), Expect = 2.2e-304
Identity = 504/534 (94.38%), Postives = 523/534 (97.94%), Query Frame = 0


Query: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
           MELSS FVKLSSP+PN+SFSSSLTPF+VKIHPN+P   NPSS  LRIFAVAVDPQQELPK
Sbjct: 1   MELSSCFVKLSSPTPNFSFSSSLTPFVVKIHPNNPSLSNPSSGGLRIFAVAVDPQQELPK 60

Query: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
           NNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSC
Sbjct: 61  NNPQRLLKELEERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120

Query: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
           LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
           KARHIRSGHSRL FLGQYV+ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAA 240

Query: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300
           SLQNLIFPYDDMDK++RKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Sbjct: 241 SLQNLIFPYDDMDKMVRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEE 300

Query: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360
           CEPRLRRQLEDVDYVSVEFEDK+I WQDMV+YKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301 CEPRLRRQLEDVDYVSVEFEDKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420
           IWDYDSRPQVMQALGYP+PVTDKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER
Sbjct: 361 IWDYDSRPQVMQALGYPVPVTDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480
           LEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLI+YSE+
Sbjct: 421 LEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYSEQ 480

Query: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 535
           VQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 481 VQDAYENNRRLRNPATTAVQQALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Chy2G031230 vs. ExPASy TrEMBL
Match: A0A6J1IRK8 (ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111477828 PE=4 SV=1)

HSP 1 Score: 1047.7 bits (2708), Expect = 1.6e-302
Identity = 500/534 (93.63%), Postives = 523/534 (97.94%), Query Frame = 0


Query: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
           MELSS FVKLSSP+PN+SFSSSLTPF+VKIHPN+P   NPSS +LRIFAVAVDP+QELPK
Sbjct: 1   MELSSCFVKLSSPTPNFSFSSSLTPFVVKIHPNNPSLSNPSSGSLRIFAVAVDPRQELPK 60

Query: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
           NNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSC
Sbjct: 61  NNPQRLLKELEERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120

Query: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
           LPSSRLNNADKTWM+EYLLEAKQALGYPLEP DSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMEEYLLEAKQALGYPLEPFDSYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
           KARHIRSGHSRL FLGQYV+ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAA 240

Query: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300
           SLQNLIFPYDDMDK++RKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Sbjct: 241 SLQNLIFPYDDMDKMVRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEE 300

Query: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360
           CEPRLRRQLEDVDYVSVEFEDK+I WQDMV+YKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301 CEPRLRRQLEDVDYVSVEFEDKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420
           IWDYDSRPQVMQALGYP+PVTDKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER
Sbjct: 361 IWDYDSRPQVMQALGYPVPVTDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480
           LEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLI+YSE+
Sbjct: 421 LEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYSEQ 480

Query: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 535
           VQDAYENNRRLRNPATTAVQQ+LHGLSY VYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 481 VQDAYENNRRLRNPATTAVQQSLHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Chy2G031230 vs. NCBI nr
Match: XP_004141878.1 (ribonuclease III domain-containing protein RNC1, chloroplastic isoform X1 [Cucumis sativus] >KGN48593.1 hypothetical protein Csa_003755 [Cucumis sativus])

HSP 1 Score: 1088 bits (2813), Expect = 0.0
Identity = 532/534 (99.63%), Postives = 533/534 (99.81%), Query Frame = 0


Query: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
           MELSSSFVKLSSPS NYSFSSSLTPFIVKIHPNHPIFPNPSSANLR+FAVAVDPQQELPK
Sbjct: 1   MELSSSFVKLSSPS-NYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPK 60

Query: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
           NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC
Sbjct: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120

Query: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
           LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
           KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA
Sbjct: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240

Query: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300
           SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
Sbjct: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300

Query: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360
           CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420
           IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER
Sbjct: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480
           LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK
Sbjct: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480

Query: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 534
           VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
Sbjct: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 533

[Close]

BLAST of Chy2G031230 vs. NCBI nr
Match: XP_038883471.1 (ribonuclease III domain-containing protein RNC1, chloroplastic [Benincasa hispida])

HSP 1 Score: 1079 bits (2791), Expect = 0.0
Identity = 523/534 (97.94%), Postives = 531/534 (99.44%), Query Frame = 0


Query: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
           MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK
Sbjct: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60

Query: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
           NNPQRLLKELAERKRATSPKKKVPP+RFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSC
Sbjct: 61  NNPQRLLKELAERKRATSPKKKVPPKRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120

Query: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
           LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
           KARHIRSGHSRL FLGQYV+ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240

Query: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300
           SLQNLIFPYDDMDK+IRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Sbjct: 241 SLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEE 300

Query: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360
           CEPRLRRQLEDVDYVSVEFEDKRI WQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301 CEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420
           IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER
Sbjct: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480
           LEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEK
Sbjct: 421 LEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEK 480

Query: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 534
           VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Chy2G031230 vs. NCBI nr
Match: XP_008440359.1 (PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic [Cucumis melo])

HSP 1 Score: 1073 bits (2774), Expect = 0.0
Identity = 519/534 (97.19%), Postives = 528/534 (98.88%), Query Frame = 0


Query: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
           MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSS NLRIFAVAVDPQQELPK
Sbjct: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSGNLRIFAVAVDPQQELPK 60

Query: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
           NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSC
Sbjct: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120

Query: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
           LPSSRLNNADKTWMDEYLLEAKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLDPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
           KARHIRSGHSRL FLGQYV+ELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLLRYPRESPGPMRERVFALIGKRNLPKWIKAA 240

Query: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300
           SLQNLIFPYDDMDK+IRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Sbjct: 241 SLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEE 300

Query: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360
           CEPRLRRQLEDVDYVSVEFEDKRI WQDM+SYKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301 CEPRLRRQLEDVDYVSVEFEDKRISWQDMISYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420
           IWDYDSRPQVMQALGYPLPV DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER
Sbjct: 361 IWDYDSRPQVMQALGYPLPVVDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480
           LEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEK
Sbjct: 421 LEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEK 480

Query: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 534
           VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Chy2G031230 vs. NCBI nr
Match: XP_022133289.1 (ribonuclease III domain-containing protein RNC1, chloroplastic [Momordica charantia])

HSP 1 Score: 1052 bits (2720), Expect = 0.0
Identity = 507/534 (94.94%), Postives = 526/534 (98.50%), Query Frame = 0


Query: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
           MELSSSFV+L+SP+PNYSFSSSLTPF  KI+PN+P FPNP+S NLRIFAVAVDPQQELPK
Sbjct: 1   MELSSSFVQLASPTPNYSFSSSLTPFHFKIYPNNPSFPNPTSGNLRIFAVAVDPQQELPK 60

Query: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
           NNPQRLLKELAERKRATSPKK+VPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSC
Sbjct: 61  NNPQRLLKELAERKRATSPKKRVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120

Query: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
           LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSD+YGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDNYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
           KARHIRSGHSRL FLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKR+LPKWIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRSLPKWIKAA 240

Query: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300
           SLQNLIFPYDDMDK+IRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Sbjct: 241 SLQNLIFPYDDMDKMIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEE 300

Query: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360
           CEPRLRRQLEDVDYVSVEFEDK+I WQDMV+YKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301 CEPRLRRQLEDVDYVSVEFEDKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420
           IWDYDSRPQVMQALGYP+PV+DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER
Sbjct: 361 IWDYDSRPQVMQALGYPVPVSDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480
           LEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEK
Sbjct: 421 LEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEK 480

Query: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 534
           VQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 481 VQDAYENNRRLRNPATTAVQQALHGLSYAVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Chy2G031230 vs. NCBI nr
Match: XP_023543359.1 (ribonuclease III domain-containing protein RNC1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1049 bits (2713), Expect = 0.0
Identity = 504/534 (94.38%), Postives = 524/534 (98.13%), Query Frame = 0


Query: 1   MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPK 60
           MELSS FVKLSSP+PN+SFSSSLTPF+VKIHPN+P   NPSS +LRIFAVAVDPQQELPK
Sbjct: 1   MELSSCFVKLSSPTPNFSFSSSLTPFVVKIHPNNPSLSNPSSGSLRIFAVAVDPQQELPK 60

Query: 61  NNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSC 120
           NNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDK+LAERFLNSPQLTLKSFPLLSSC
Sbjct: 61  NNPQRLLKELEERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSC 120

Query: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180
           LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT
Sbjct: 121 LPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERT 180

Query: 181 KARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAA 240
           KARHIRSGHSRL FLGQYV+ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAA
Sbjct: 181 KARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPQWIKAA 240

Query: 241 SLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE 300
           SLQNLIFPYDDMDK++RKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Sbjct: 241 SLQNLIFPYDDMDKMVRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEE 300

Query: 301 CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGN 360
           CEPRLRRQLEDVDYVSVEFEDK+I WQDMV+YKPPEDALFAHPRLFRACVPPGMHRFRGN
Sbjct: 301 CEPRLRRQLEDVDYVSVEFEDKKISWQDMVAYKPPEDALFAHPRLFRACVPPGMHRFRGN 360

Query: 361 IWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420
           IWDYDSRPQVMQALGYP+PVTDKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER
Sbjct: 361 IWDYDSRPQVMQALGYPVPVTDKIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCYER 420

Query: 421 LEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEK 480
           LEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLI+YSE+
Sbjct: 421 LEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIVYSEQ 480

Query: 481 VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 534
           VQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 481 VQDAYENNRRLRNPATTAVQQALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 534

[Close]

BLAST of Chy2G031230 vs. TAIR 10
Match: AT4G37510.1 (Ribonuclease III family protein )

HSP 1 Score: 902.1 bits (2330), Expect = 2.1e-262
Identity = 432/532 (81.20%), Postives = 478/532 (89.85%), Query Frame = 0


Query: 4   SSSFVKL-SSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRIFAVAVDPQQELPKNN 63
           SSS +++ SS +P  SFSSS++ F  K      I       NLRI A      Q LP+++
Sbjct: 9   SSSLLRICSSSAPEISFSSSISQFPSK---TQSILTKSRFQNLRICASVTAETQGLPRDS 68

Query: 64  PQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCLP 123
           PQRLLKELA+RK AT PKKKVPP+RFILRPPLDDK+LAERFLNSPQL+LKSFPLLSSCLP
Sbjct: 69  PQRLLKELAQRKTATGPKKKVPPKRFILRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLP 128

Query: 124 SSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKA 183
           SS+LNNADKTW+DEYLLE KQALGY LEPS+S GDDNPAK FDTLLYLAFQHPSC+R +A
Sbjct: 129 SSKLNNADKTWIDEYLLEVKQALGYSLEPSESLGDDNPAKHFDTLLYLAFQHPSCDRARA 188

Query: 184 RHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASL 243
           RH+++GHSRL+FLGQYVLELAL E+FLQRYPRESPGPMRERVFALIGKR LPKWIKAASL
Sbjct: 189 RHVKNGHSRLWFLGQYVLELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASL 248

Query: 244 QNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECE 303
           QNLIFPYDDMDK+IRK+REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA EC+
Sbjct: 249 QNLIFPYDDMDKLIRKEREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDADECQ 308

Query: 304 PRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIW 363
           PR RRQLEDVDYVSVEFE K++GWQD+ +YKPPEDALFAHPRLFRACVPPGMHRFRGNIW
Sbjct: 309 PRSRRQLEDVDYVSVEFEGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGNIW 368

Query: 364 DYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLE 423
           D+DS+P+VMQ LGYPL + D+I +ITEARNIELGLGLQLCFLHPSKHKFEHPRFC+ERLE
Sbjct: 369 DFDSKPKVMQTLGYPLTMNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFERLE 428

Query: 424 YLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQ 483
           Y+GQKIQDI MAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+ LH  IIYSE+V 
Sbjct: 429 YVGQKIQDIAMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEEVH 488

Query: 484 DAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 535
           D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 489 DRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537

[Close]

BLAST of Chy2G031230 vs. TAIR 10
Match: AT2G48121.2 (LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1). )

HSP 1 Score: 139.8 bits (351), Expect = 6.3e-33
Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 458 MNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVR 517
           MNKFCGRYLRE+ LH  IIYSE+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVR
Sbjct: 1   MNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVR 60

Query: 518 RIMFEVFDFEQIQPKAV 535
           R+MFEVFDFEQIQPKAV
Sbjct: 61  RLMFEVFDFEQIQPKAV 77

[Close]

BLAST of Chy2G031230 vs. TAIR 10
Match: AT2G48121.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1). )

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-22
Identity = 47/57 (82.46%), Postives = 54/57 (94.74%), Query Frame = 0


Query: 478 SEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV 535
           +E+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRR+MFEVFDFEQIQPKAV
Sbjct: 19  TEEVHDRYEHNRRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 75

The following BLAST results are available for this feature:

BLAST of Chy2G031230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZV0	3.0e-261	81.20	Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Arabidopsis th...	[more]
Q8S1Z0	9.3e-239	76.83	Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Oryza sativa s...	[more]
A6YSL1	2.7e-238	74.95	Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Zea mays OX=45...	[more]
Q5L0Q3	9.6e-10	32.26	Ribonuclease 3 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rnc PE=3...	[more]
A4IM67	1.3e-09	32.54	Ribonuclease 3 OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=r...	[more]

BLAST of Chy2G031230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGG7	0.0e+00	99.63	RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G494980 P...	[more]
A0A1S3B1J9	0.0e+00	97.19	ribonuclease III domain-containing protein RNC1, chloroplastic OS=Cucumis melo O...	[more]
A0A6J1BVK6	2.7e-305	94.94	ribonuclease III domain-containing protein RNC1, chloroplastic OS=Momordica char...	[more]
A0A6J1GEC3	2.2e-304	94.38	ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita...	[more]
A0A6J1IRK8	1.6e-302	93.63	ribonuclease III domain-containing protein RNC1, chloroplastic-like OS=Cucurbita...	[more]

BLAST of Chy2G031230 vs. NCBI nr


Match Name	Identity	Description
XP_004141878.1	99.63	ribonuclease III domain-containing protein RNC1, chloroplastic isoform X1 [Cucum...	[more]
XP_038883471.1	97.94	ribonuclease III domain-containing protein RNC1, chloroplastic [Benincasa hispid...	[more]
XP_008440359.1	97.19	PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic [Cucum...	[more]
XP_022133289.1	94.94	ribonuclease III domain-containing protein RNC1, chloroplastic [Momordica charan...	[more]
XP_023543359.1	94.38	ribonuclease III domain-containing protein RNC1, chloroplastic-like [Cucurbita p...	[more]

BLAST of Chy2G031230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37510.1	2.1e-262	81.20	Ribonuclease III family protein	[more]
AT2G48121.2	6.3e-33	83.12	LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonucle...	[more]
AT2G48121.1	1.7e-22	82.46	BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAI...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000999	Ribonuclease III domain	SMART	SM00535	riboneu5	coord: 166..303 e-value: 2.6E-26 score: 103.4
IPR000999	Ribonuclease III domain	PROSITE	PS50142	RNASE_3_2	coord: 167..280 score: 15.142906
IPR000999	Ribonuclease III domain	CDD	cd00593	RIBOc	coord: 166..297 e-value: 2.39824E-29 score: 110.395
IPR000999	Ribonuclease III domain	CDD	cd00593	RIBOc	coord: 399..524 e-value: 4.16335E-20 score: 84.5866
IPR036389	Ribonuclease III, endonuclease domain superfamily	GENE3D	1.10.1520.10	Ribonuclease III domain	coord: 163..294 e-value: 5.8E-15 score: 57.1 coord: 391..527 e-value: 2.8E-11 score: 45.2
IPR036389	Ribonuclease III, endonuclease domain superfamily	SUPERFAMILY	69065	RNase III domain-like	coord: 399..525
IPR036389	Ribonuclease III, endonuclease domain superfamily	SUPERFAMILY	69065	RNase III domain-like	coord: 132..293
IPR011907	Ribonuclease III	PANTHER	PTHR11207	RIBONUCLEASE III	coord: 1..531
None	No IPR available	PANTHER	PTHR11207:SF21	RIBONUCLEASE III DOMAIN-CONTAINING PROTEIN RNC1, CHLOROPLASTIC	coord: 1..531

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G031230.1	Chy2G031230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006396	RNA processing
biological_process	GO:0016075	rRNA catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding