Chy2G030420 (gene) Cucumber (hystrix) v1

Overview
NameChy2G030420
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 4807668 .. 4807973 (-)
RNA-Seq ExpressionChy2G030420
SyntenyChy2G030420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGAGATCTCGGCTGCCGTCGACTTCCCTACCTCTCCGGCTGCGTTCCCTCTTTTCCCGCATGCTTTCCCATCCACGAAGGAGTAGAGTACACTCGCATCCACGGCGGCGCTGGAGCCAAAAGAAGCGGCTGGAGATGGCGGTATCTTCTTAGAAAGTGGGTGAAAGATGGCATGAATATATATGGATCGAAATCTCTATCTTTCCAATACGACGCCGTTAGCTATTCGCAGAATTTTGACGAGGGCAGCCGTTGTTACGAGAGCTGCCATCGAGAAAATGAGATAGGGATTTCGAGATGA

mRNA sequence

ATGGACAGAGATCTCGGCTGCCGTCGACTTCCCTACCTCTCCGGCTGCGTTCCCTCTTTTCCCGCATGCTTTCCCATCCACGAAGGAGTAGAGTACACTCGCATCCACGGCGGCGCTGGAGCCAAAAGAAGCGGCTGGAGATGGCGGTATCTTCTTAGAAAGTGGGTGAAAGATGGCATGAATATATATGGATCGAAATCTCTATCTTTCCAATACGACGCCGTTAGCTATTCGCAGAATTTTGACGAGGGCAGCCGTTGTTACGAGAGCTGCCATCGAGAAAATGAGATAGGGATTTCGAGATGA

Coding sequence (CDS)

ATGGACAGAGATCTCGGCTGCCGTCGACTTCCCTACCTCTCCGGCTGCGTTCCCTCTTTTCCCGCATGCTTTCCCATCCACGAAGGAGTAGAGTACACTCGCATCCACGGCGGCGCTGGAGCCAAAAGAAGCGGCTGGAGATGGCGGTATCTTCTTAGAAAGTGGGTGAAAGATGGCATGAATATATATGGATCGAAATCTCTATCTTTCCAATACGACGCCGTTAGCTATTCGCAGAATTTTGACGAGGGCAGCCGTTGTTACGAGAGCTGCCATCGAGAAAATGAGATAGGGATTTCGAGATGA

Protein sequence

MDRDLGCRRLPYLSGCVPSFPACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDGMNIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEIGISR*
Homology
BLAST of Chy2G030420 vs. ExPASy TrEMBL
Match: A0A0A0KJW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497320 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 7.4e-55
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0

Query: 1   MDRDLGCRRLPYLSGCVPSFPACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDGM 60
           MDRDLGCRRLPYLSGCVPS PACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDGM
Sbjct: 1   MDRDLGCRRLPYLSGCVPSSPACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDGM 60

Query: 61  NIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEIGISR 102
           NIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEIGISR
Sbjct: 61  NIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEIGISR 101

BLAST of Chy2G030420 vs. ExPASy TrEMBL
Match: A0A5D3BBB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3040G00010 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45
Identity = 89/103 (86.41%), Postives = 94/103 (91.26%), Query Frame = 0

Query: 1   MDRDLGCRRLPYLSGCVPSFP-ACFPIHEG-VEYTRIHGGAGAKRSGWRWRYLLRKWVKD 60
           M+RDLGC RLPYLSGCVP+ P ACFP+HEG V YTRIHGGAG KRS WRWRYLLRKWVKD
Sbjct: 1   MERDLGCSRLPYLSGCVPASPAACFPVHEGSVGYTRIHGGAGGKRSAWRWRYLLRKWVKD 60

Query: 61  GMNIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEIGISR 102
            M+IYGSKSLSFQYDAVSYSQNFDEGSRCYES +RENEIGISR
Sbjct: 61  SMSIYGSKSLSFQYDAVSYSQNFDEGSRCYESYNRENEIGISR 103

BLAST of Chy2G030420 vs. ExPASy TrEMBL
Match: A0A6P5YN44 (uncharacterized protein LOC111293198 OS=Durio zibethinus OX=66656 GN=LOC111293198 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.1e-21
Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 1  MDRDLGCRRLPYLSGCVPSFPACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDGM 60
          M+RDLG RR  Y SGC    P+CFP+HE +EY+RIH  + + +   RWR LLR+ ++DG 
Sbjct: 4  MERDLGRRRSSYFSGCYMMSPSCFPVHEEMEYSRIHYCSSSDKRRRRWRNLLRRLLRDGK 63

Query: 61 N-IYGSKSLSFQYDAVSYSQNFDEGSRCYESCH 93
          N IYGSK LSF YDAVSYSQNFDEG    ES H
Sbjct: 64 NSIYGSKPLSFHYDAVSYSQNFDEGCHHEESGH 96

BLAST of Chy2G030420 vs. ExPASy TrEMBL
Match: A0A5N6QWS2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_006837 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.5e-20
Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = 0

Query: 1  MDRDLGC-RRLPYLSGCVPSFPACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDG 60
          M+RD    RR  YLSGC+ S P+CFP+HE   YTRIH  + +KRS WRWR LLR++V++ 
Sbjct: 1  MERDSSTHRRSSYLSGCMMS-PSCFPVHEENGYTRIHCCSHSKRS-WRWRNLLRRFVRES 60

Query: 61 MNIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEI 98
           N+YGSK LSF YDAVSYSQNFD+G      CH  NE+
Sbjct: 61 KNLYGSKPLSFHYDAVSYSQNFDDG------CH-NNEV 89

BLAST of Chy2G030420 vs. ExPASy TrEMBL
Match: A0A1R3K3M1 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_11686 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.7e-20
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 0

Query: 1  MDRDL-GCRRLPYLSGCVPSFPACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDG 60
          MDRDL   RR  Y SGC+ S P+CFP+HE ++Y+RIH  +G+ + G RWR LLR+ V+DG
Sbjct: 4  MDRDLISRRRSSYFSGCMMS-PSCFPVHEEMDYSRIHYCSGSDKRGRRWRNLLRRLVRDG 63

Query: 61 MN-IYG-SKSLSFQYDAVSYSQNFDEGSRCYESCH 93
           N +YG SK LSF YDAVSYSQNFD+G    ES H
Sbjct: 64 KNRVYGTSKPLSFHYDAVSYSQNFDDGCHHEESAH 97

BLAST of Chy2G030420 vs. NCBI nr
Match: KGN48682.1 (hypothetical protein Csa_003439 [Cucumis sativus])

HSP 1 Score: 224 bits (571), Expect = 3.92e-74
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0

Query: 1   MDRDLGCRRLPYLSGCVPSFPACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDGM 60
           MDRDLGCRRLPYLSGCVPS PACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDGM
Sbjct: 1   MDRDLGCRRLPYLSGCVPSSPACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDGM 60

Query: 61  NIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEIGISR 101
           NIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEIGISR
Sbjct: 61  NIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEIGISR 101

BLAST of Chy2G030420 vs. NCBI nr
Match: KAA0057639.1 (hypothetical protein E6C27_scaffold25649G00010 [Cucumis melo var. makuwa] >TYJ97130.1 hypothetical protein E5676_scaffold3040G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 192 bits (487), Expect = 2.75e-61
Identity = 89/103 (86.41%), Postives = 94/103 (91.26%), Query Frame = 0

Query: 1   MDRDLGCRRLPYLSGCVPSFPA-CFPIHEG-VEYTRIHGGAGAKRSGWRWRYLLRKWVKD 60
           M+RDLGC RLPYLSGCVP+ PA CFP+HEG V YTRIHGGAG KRS WRWRYLLRKWVKD
Sbjct: 1   MERDLGCSRLPYLSGCVPASPAACFPVHEGSVGYTRIHGGAGGKRSAWRWRYLLRKWVKD 60

Query: 61  GMNIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEIGISR 101
            M+IYGSKSLSFQYDAVSYSQNFDEGSRCYES +RENEIGISR
Sbjct: 61  SMSIYGSKSLSFQYDAVSYSQNFDEGSRCYESYNRENEIGISR 103

BLAST of Chy2G030420 vs. NCBI nr
Match: KAG6594915.1 (hypothetical protein SDJN03_11468, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152 bits (384), Expect = 1.49e-45
Identity = 72/106 (67.92%), Postives = 83/106 (78.30%), Query Frame = 0

Query: 1   MDRDLGCRRLPYLSGCVPSFPACFPIHEGVEYTRIHGGAGA-----KRSGWRWRYLLRKW 60
           M+ DL  RRLPYLS CV +   CFPIHEGVEY+RI+GG G      KR GWRWRYLLR+W
Sbjct: 1   METDLARRRLPYLSACVAASSPCFPIHEGVEYSRINGGGGGGGGGGKRIGWRWRYLLRRW 60

Query: 61  VKDGMNIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEIGISR 101
           +KD MN+YG+KSLSFQYDAVSYSQNFD+G  C+   +RENEI ISR
Sbjct: 61  MKDRMNMYGTKSLSFQYDAVSYSQNFDDG--CHYERNRENEIRISR 104

BLAST of Chy2G030420 vs. NCBI nr
Match: XP_022741710.1 (uncharacterized protein LOC111293198 [Durio zibethinus])

HSP 1 Score: 114 bits (285), Expect = 2.07e-30
Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 1  MDRDLGCRRLPYLSGCVPSFPACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDGM 60
          M+RDLG RR  Y SGC    P+CFP+HE +EY+RIH  + + +   RWR LLR+ ++DG 
Sbjct: 4  MERDLGRRRSSYFSGCYMMSPSCFPVHEEMEYSRIHYCSSSDKRRRRWRNLLRRLLRDGK 63

Query: 61 N-IYGSKSLSFQYDAVSYSQNFDEGSRCYESCH 92
          N IYGSK LSF YDAVSYSQNFDEG    ES H
Sbjct: 64 NSIYGSKPLSFHYDAVSYSQNFDEGCHHEESGH 96

BLAST of Chy2G030420 vs. NCBI nr
Match: KAE8010469.1 (hypothetical protein FH972_006837 [Carpinus fangiana])

HSP 1 Score: 109 bits (272), Expect = 1.65e-28
Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = 0

Query: 1  MDRDLGC-RRLPYLSGCVPSFPACFPIHEGVEYTRIHGGAGAKRSGWRWRYLLRKWVKDG 60
          M+RD    RR  YLSGC+ S P+CFP+HE   YTRIH  + +KRS WRWR LLR++V++ 
Sbjct: 1  MERDSSTHRRSSYLSGCMMS-PSCFPVHEENGYTRIHCCSHSKRS-WRWRNLLRRFVRES 60

Query: 61 MNIYGSKSLSFQYDAVSYSQNFDEGSRCYESCHRENEI 97
           N+YGSK LSF YDAVSYSQNFD+G      CH  NE+
Sbjct: 61 KNLYGSKPLSFHYDAVSYSQNFDDG------CHN-NEV 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KJW17.4e-5599.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497320 PE=4 SV=1[more]
A0A5D3BBB94.0e-4586.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6P5YN441.1e-2159.14uncharacterized protein LOC111293198 OS=Durio zibethinus OX=66656 GN=LOC11129319... [more]
A0A5N6QWS24.5e-2058.16Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_006837 PE=4 SV=1[more]
A0A1R3K3M17.7e-2058.95Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_11686 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN48682.13.92e-7499.01hypothetical protein Csa_003439 [Cucumis sativus][more]
KAA0057639.12.75e-6186.41hypothetical protein E6C27_scaffold25649G00010 [Cucumis melo var. makuwa] >TYJ97... [more]
KAG6594915.11.49e-4567.92hypothetical protein SDJN03_11468, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022741710.12.07e-3059.14uncharacterized protein LOC111293198 [Durio zibethinus][more]
KAE8010469.11.65e-2858.16hypothetical protein FH972_006837 [Carpinus fangiana][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33168:SF6OS05G0516100 PROTEINcoord: 10..93
NoneNo IPR availablePANTHERPTHR33168STRESS INDUCED PROTEIN-RELATEDcoord: 10..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G030420.1Chy2G030420.1mRNA