Chy2G030070 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G030070
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type domain-containing protein
Location	chrH02: 4557580 .. 4559012 (+)
RNA-Seq Expression	Chy2G030070
Synteny	Chy2G030070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCGGTCGAAATTATGGGCTTTTCCATCCAAGTCAGCCCATCATCTTCCAACAACACAAAGACAGCTGCACCACTTGGTTCCTCCTCACCTCCCAAGTCCCAATCATTTTCCGCTAGGTGGTGTGTTATGGGCAATCAATCAATCATAATTTAAAAGATAAGTCTTAGGTTTGATGTTGTTTACTTATGTTATACATTTGTATTAATACATATAACCTACATCCAAATATGTAAATAAAAGTTATAATTCAATTGGCGACACAAAGATGTTTAATTCGATTGTATTTGAAAATTATGTTGTACCGTTATTTTTAACATTATTATAGTTATGGTTACCATTATTGTTATTTTTTTAGAGAAAAAATTGTGAATTTTAATCAAATGATCAAAAGTAGTTTAATTACATTTACGATTGATCAATCAACACCAATTTTCATTATGAATTATGTAAACACGATCTTATAAAGATGAAAATACGACTAAAAAATTGTGAAGTTAGGACATGTCATTTTTAATATATATATATAAACTAAAATGGTTTGGTAGTAATTAAGAGTTACCACTAAGTTAGTTAGTATGACAAAATAAGAAATGAGTTGATTGATGGTATTAGATGATATATGAAAACTAAGGGGATGGAGGTATAATTGAAGGTTAGAGGCACAGCCCACAGAAGTCAGTTTGTTGATGGTTTGGGGCATCGTTTGTCACGTGCCACCACTGCCATTACGACAAACGTGCCACACTCCACCTCCCTCTACCCTCGCACTTGCATGGCCCCTTCTACAAAACCTAAATTTTCTTAACTCTTCTGTTCCTTAACCTAACCATTATTATTATGAAGCCCCCTTTTAGTTTTACTCCCAATCTTCACTCTCTTTCTTTACTAATAATAATTCTCTTACACCCATTCTTCACCGTCCAAGCCCAACAAACCTCCTCCCAGTCCCACCTTCACTATTTGAAATTAAGCCGCCCCTTAACGGTGACCGTTCTCCTTCTTCTCTTCATTTTCTTCATCGTCCTCTTTTTCTCCGTTTACATCCGCCACTTTTTGGAGTTGAACGCGGCCTCAGACGCTGTGCTTCGGTCCCTGGATCGCTTGGACCGGTTTGGGCCATCTCACGGTTTGAAACCGGCAGAGATTGGTGCGTTTCCTCTGGTGGCCCACTCAGCAATAAAGGAAATGAAAATGGGGAAGTGGTCCTTGGAATGTGCCGTTTGCTTGGCTGAATTCCAACACTACGAAACCCTACGTTTGTTGCCTAAATGTGGTCACGTTTTTCATCCCCCTTGCATCGACGCTTGGCTCGCCTCTTGCGCCACCTGCCCCATTTGTAGGGCTCAACTCGCCGCCGGGGAAAATTTCTCATCCGAATTCGTGGCCATCGATGTTGTTCATCATACTAATGGGGAAGAACTACTTTGA

mRNA sequence

ATGGGCCGGTCGAAATTATGGGCTTTTCCATCCAAGTCAGCCCATCATCTTCCAACAACACAAAGACAGCTGCACCACTTGGTTCCTCCTCACCTCCCAAGTCCCAATCATTTTCCGCTAGGTGACGCTGTGCTTCGGTCCCTGGATCGCTTGGACCGGTTTGGGCCATCTCACGGTTTGAAACCGGCAGAGATTGGTGCGTTTCCTCTGGTGGCCCACTCAGCAATAAAGGAAATGAAAATGGGGAAGTGGTCCTTGGAATGTGCCGTTTGCTTGGCTGAATTCCAACACTACGAAACCCTACGTTTGTTGCCTAAATGTGGTCACGTTTTTCATCCCCCTTGCATCGACGCTTGGCTCGCCTCTTGCGCCACCTGCCCCATTTGTAGGGCTCAACTCGCCGCCGGGGAAAATTTCTCATCCGAATTCGTGGCCATCGATGTTGTTCATCATACTAATGGGGAAGAACTACTTTGA

Coding sequence (CDS)

ATGGGCCGGTCGAAATTATGGGCTTTTCCATCCAAGTCAGCCCATCATCTTCCAACAACACAAAGACAGCTGCACCACTTGGTTCCTCCTCACCTCCCAAGTCCCAATCATTTTCCGCTAGGTGACGCTGTGCTTCGGTCCCTGGATCGCTTGGACCGGTTTGGGCCATCTCACGGTTTGAAACCGGCAGAGATTGGTGCGTTTCCTCTGGTGGCCCACTCAGCAATAAAGGAAATGAAAATGGGGAAGTGGTCCTTGGAATGTGCCGTTTGCTTGGCTGAATTCCAACACTACGAAACCCTACGTTTGTTGCCTAAATGTGGTCACGTTTTTCATCCCCCTTGCATCGACGCTTGGCTCGCCTCTTGCGCCACCTGCCCCATTTGTAGGGCTCAACTCGCCGCCGGGGAAAATTTCTCATCCGAATTCGTGGCCATCGATGTTGTTCATCATACTAATGGGGAAGAACTACTTTGA

Protein sequence

MGRSKLWAFPSKSAHHLPTTQRQLHHLVPPHLPSPNHFPLGDAVLRSLDRLDRFGPSHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRAQLAAGENFSSEFVAIDVVHHTNGEELL*

Homology

[Close]

BLAST of Chy2G030070 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-21
Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 57  SHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCI 116
           + GL  + +  FP   +S +K  K+GK  LECA+CL EF+  ETLRLLPKC HVFHP CI
Sbjct: 97  ARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCI 156

Query: 117 DAWLASCATCPICRAQLA 135
           DAWL +  TCP+CRA LA
Sbjct: 157 DAWLEAHVTCPVCRANLA 174

[Close]

BLAST of Chy2G030070 vs. ExPASy Swiss-Prot
Match: Q9SK92 (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.1e-21
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 59  GLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDA 118
           GL  + I  FP   +S +K +++GK +LEC VCL EF+  ETLRL+P+C HVFHP CIDA
Sbjct: 89  GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 148

Query: 119 WLASCATCPICRAQL--AAGENFSSE 143
           WL S  TCP+CRA L    GE+ SSE
Sbjct: 149 WLRSQTTCPLCRANLVPVPGESVSSE 174

[Close]

BLAST of Chy2G030070 vs. ExPASy Swiss-Prot
Match: Q84W40 (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-20
Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 57  SHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCI 116
           + GL  + I  FP   +S +K +++GK +LEC+VCL EF+  ETLRL+PKC HVFHP CI
Sbjct: 113 ARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCI 172

Query: 117 DAWLASCATCPICRAQL 134
           DAWL S  TCP+CRA L
Sbjct: 173 DAWLRSHTTCPLCRADL 189

[Close]

BLAST of Chy2G030070 vs. ExPASy Swiss-Prot
Match: Q8LGA5 (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-20
Identity = 44/78 (56.41%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 57  SHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCI 116
           + GL    I  FP   +S +K  K+GK +LECA+CL EF+  ETLRLLPKC HVFHP CI
Sbjct: 93  ARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCI 152

Query: 117 DAWLASCATCPICRAQLA 135
            AWL    TCP+CR  LA
Sbjct: 153 GAWLQGHVTCPVCRTNLA 170

[Close]

BLAST of Chy2G030070 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-20
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 59  GLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDA 118
           GL  A + +FP+ A+S++KE K+G   LECA+CL E + +ET+RLLP C H+FH  CID 
Sbjct: 95  GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDT 154

Query: 119 WLASCATCPICRAQLAAGEN 139
           WL S ATCP+CR+ L A  N
Sbjct: 155 WLYSHATCPVCRSNLTAKSN 174

[Close]

BLAST of Chy2G030070 vs. ExPASy TrEMBL
Match: A0A0A0KIT7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499190 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58
Identity = 108/114 (94.74%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 42  DAVLRSLDRLDRFGPSHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL 101
           DAVLRSL+R+DRFGPSHGLK AEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL
Sbjct: 82  DAVLRSLERVDRFGPSHGLKAAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL 141

Query: 102 RLLPKCGHVFHPPCIDAWLASCATCPICRAQLAAGENFSSEFVAIDVVHHTNGE 156
           RLLPKCGHVFHPPCIDAWLASCATCPICRAQLAAGENFSSEFVAIDVV H NG+
Sbjct: 142 RLLPKCGHVFHPPCIDAWLASCATCPICRAQLAAGENFSSEFVAIDVVDHNNGD 195

[Close]

BLAST of Chy2G030070 vs. ExPASy TrEMBL
Match: A0A5A7T2D1 (E3 ubiquitin-protein ligase ATL31-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003080 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 8.8e-55
Identity = 107/114 (93.86%), Postives = 107/114 (93.86%), Query Frame = 0


Query: 42  DAVLRSLDRLDRFGPSHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL 101
           DAVLRSL RLDRFGPSHGLKPAEI AFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL
Sbjct: 18  DAVLRSLARLDRFGPSHGLKPAEILAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL 77

Query: 102 RLLPKCGHVFHPPCIDAWLASCATCPICRAQLAAGENFSSEFVAIDVVHHTNGE 156
           RLLPKCGHVFHPPCIDAWLASCATCPICRA LAAGENFSSEFVAI VV   NGE
Sbjct: 78  RLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENFSSEFVAIGVVDR-NGE 130

[Close]

BLAST of Chy2G030070 vs. ExPASy TrEMBL
Match: A0A6J5XP90 (RING-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS38520 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 9.5e-25
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 59  GLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDA 118
           GL PA I  FP++ +SA+K++K+GK +LECAVCL EF  YETLRLLPKC HVFHP CIDA
Sbjct: 91  GLDPAVIETFPILVYSAVKDLKIGKGALECAVCLGEFDDYETLRLLPKCDHVFHPDCIDA 150

Query: 119 WLASCATCPICRAQLAAGEN 139
           WLA+  TCP+CRA+L+A  N
Sbjct: 151 WLAAHVTCPVCRAKLSAESN 170

[Close]

BLAST of Chy2G030070 vs. ExPASy TrEMBL
Match: M5W2P7 (RING-type domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa025826mg PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 59  GLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDA 118
           GL PA I  FP++ +SA+K++K+GK +LECAVCL EF  YETLRLLPKC HVFHP CIDA
Sbjct: 91  GLDPAVIETFPILVYSAVKDLKIGKEALECAVCLGEFDDYETLRLLPKCDHVFHPDCIDA 150

Query: 119 WLASCATCPICRAQLAAGEN 139
           WLA+  TCP+CRA+L+A  N
Sbjct: 151 WLAAHVTCPVCRAKLSAESN 170

[Close]

BLAST of Chy2G030070 vs. ExPASy TrEMBL
Match: A0A251NUI3 (RING-type domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G195100 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 59  GLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDA 118
           GL PA I  FP++ +SA+K++K+GK +LECAVCL EF  YETLRLLPKC HVFHP CIDA
Sbjct: 91  GLDPAVIETFPILVYSAVKDLKIGKEALECAVCLGEFDDYETLRLLPKCDHVFHPDCIDA 150

Query: 119 WLASCATCPICRAQLAAGEN 139
           WLA+  TCP+CRA+L+A  N
Sbjct: 151 WLAAHVTCPVCRAKLSAESN 170

[Close]

BLAST of Chy2G030070 vs. NCBI nr
Match: KGN48724.1 (hypothetical protein Csa_004396 [Cucumis sativus])

HSP 1 Score: 233 bits (594), Expect = 3.18e-75
Identity = 108/114 (94.74%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 42  DAVLRSLDRLDRFGPSHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL 101
           DAVLRSL+R+DRFGPSHGLK AEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL
Sbjct: 82  DAVLRSLERVDRFGPSHGLKAAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL 141

Query: 102 RLLPKCGHVFHPPCIDAWLASCATCPICRAQLAAGENFSSEFVAIDVVHHTNGE 155
           RLLPKCGHVFHPPCIDAWLASCATCPICRAQLAAGENFSSEFVAIDVV H NG+
Sbjct: 142 RLLPKCGHVFHPPCIDAWLASCATCPICRAQLAAGENFSSEFVAIDVVDHNNGD 195

[Close]

BLAST of Chy2G030070 vs. NCBI nr
Match: KAA0036326.1 (E3 ubiquitin-protein ligase ATL31-like [Cucumis melo var. makuwa] >TYK12720.1 E3 ubiquitin-protein ligase ATL31-like [Cucumis melo var. makuwa])

HSP 1 Score: 221 bits (562), Expect = 2.75e-71
Identity = 107/114 (93.86%), Postives = 107/114 (93.86%), Query Frame = 0


Query: 42  DAVLRSLDRLDRFGPSHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL 101
           DAVLRSL RLDRFGPSHGLKPAEI AFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL
Sbjct: 18  DAVLRSLARLDRFGPSHGLKPAEILAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETL 77

Query: 102 RLLPKCGHVFHPPCIDAWLASCATCPICRAQLAAGENFSSEFVAIDVVHHTNGE 155
           RLLPKCGHVFHPPCIDAWLASCATCPICRA LAAGENFSSEFVAI VV   NGE
Sbjct: 78  RLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENFSSEFVAIGVVDR-NGE 130

[Close]

BLAST of Chy2G030070 vs. NCBI nr
Match: CAB4314233.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 123 bits (308), Expect = 3.22e-30
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 59  GLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDA 118
           GL PA I  FP++ +SA+K++K+GK +LECAVCL EF  YETLRLLPKC HVFHP CIDA
Sbjct: 91  GLDPAVIETFPILVYSAVKDLKIGKGALECAVCLGEFDDYETLRLLPKCDHVFHPDCIDA 150

Query: 119 WLASCATCPICRAQLAAGEN 138
           WLA+  TCP+CRA+L+A  N
Sbjct: 151 WLAAHVTCPVCRAKLSAESN 170

[Close]

BLAST of Chy2G030070 vs. NCBI nr
Match: XP_007206808.2 (RING-H2 finger protein ATL32 [Prunus persica] >ONI02390.1 hypothetical protein PRUPE_6G195100 [Prunus persica])

HSP 1 Score: 122 bits (307), Expect = 4.66e-30
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 59  GLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDA 118
           GL PA I  FP++ +SA+K++K+GK +LECAVCL EF  YETLRLLPKC HVFHP CIDA
Sbjct: 91  GLDPAVIETFPILVYSAVKDLKIGKEALECAVCLGEFDDYETLRLLPKCDHVFHPDCIDA 150

Query: 119 WLASCATCPICRAQLAAGEN 138
           WLA+  TCP+CRA+L+A  N
Sbjct: 151 WLAAHVTCPVCRAKLSAESN 170

[Close]

BLAST of Chy2G030070 vs. NCBI nr
Match: XP_008235322.1 (PREDICTED: E3 ubiquitin-protein ligase ATL31-like [Prunus mume])

HSP 1 Score: 122 bits (307), Expect = 4.66e-30
Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 59  GLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDA 118
           GL PA I  FP++ +SA+K++K+GK +LECAVCL EF  YETLRLLPKC HVFHP CIDA
Sbjct: 91  GLDPAVIKTFPILVYSAVKDLKIGKGALECAVCLGEFDDYETLRLLPKCDHVFHPDCIDA 150

Query: 119 WLASCATCPICRAQLAAGEN 138
           WLA+  TCP+CRA L+A  N
Sbjct: 151 WLAAHVTCPVCRANLSAESN 170

[Close]

BLAST of Chy2G030070 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22
Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 57  SHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCI 116
           + GL  + +  FP   +S +K  K+GK  LECA+CL EF+  ETLRLLPKC HVFHP CI
Sbjct: 97  ARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCI 156

Query: 117 DAWLASCATCPICRAQLA 135
           DAWL +  TCP+CRA LA
Sbjct: 157 DAWLEAHVTCPVCRANLA 174

[Close]

BLAST of Chy2G030070 vs. TAIR 10
Match: AT1G22500.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-22
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 59  GLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDA 118
           GL  + I  FP   +S +K +++GK +LEC VCL EF+  ETLRL+P+C HVFHP CIDA
Sbjct: 89  GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 148

Query: 119 WLASCATCPICRAQL--AAGENFSSE 143
           WL S  TCP+CRA L    GE+ SSE
Sbjct: 149 WLRSQTTCPLCRANLVPVPGESVSSE 174

[Close]

BLAST of Chy2G030070 vs. TAIR 10
Match: AT1G72200.1 (RING/U-box superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-21
Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 57  SHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCI 116
           + GL  + I  FP   +S +K +++GK +LEC+VCL EF+  ETLRL+PKC HVFHP CI
Sbjct: 113 ARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCI 172

Query: 117 DAWLASCATCPICRAQL 134
           DAWL S  TCP+CRA L
Sbjct: 173 DAWLRSHTTCPLCRADL 189

[Close]

BLAST of Chy2G030070 vs. TAIR 10
Match: AT4G40070.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.2e-21
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 59  GLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDA 118
           GL  A + +FP+ A+S++KE K+G   LECA+CL E + +ET+RLLP C H+FH  CID 
Sbjct: 95  GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDT 154

Query: 119 WLASCATCPICRAQLAAGEN 139
           WL S ATCP+CR+ L A  N
Sbjct: 155 WLYSHATCPVCRSNLTAKSN 174

[Close]

BLAST of Chy2G030070 vs. TAIR 10
Match: AT5G27420.1 (carbon/nitrogen insensitive 1 )

HSP 1 Score: 99.8 bits (247), Expect = 2.2e-21
Identity = 44/78 (56.41%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 57  SHGLKPAEIGAFPLVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCI 116
           + GL    I  FP   +S +K  K+GK +LECA+CL EF+  ETLRLLPKC HVFHP CI
Sbjct: 93  ARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCI 152

Query: 117 DAWLASCATCPICRAQLA 135
            AWL    TCP+CR  LA
Sbjct: 153 GAWLQGHVTCPVCRTNLA 170

The following BLAST results are available for this feature:

BLAST of Chy2G030070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXX9	2.7e-21	57.69	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
Q9SK92	6.1e-21	55.81	E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ...	[more]
Q84W40	1.8e-20	57.14	RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2	[more]
Q8LGA5	3.0e-20	56.41	E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 ...	[more]
Q8W571	3.0e-20	53.75	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]

BLAST of Chy2G030070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIT7	1.7e-58	94.74	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499190 P...	[more]
A0A5A7T2D1	8.8e-55	93.86	E3 ubiquitin-protein ligase ATL31-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J5XP90	9.5e-25	66.25	RING-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LO...	[more]
M5W2P7	1.2e-24	66.25	RING-type domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUP...	[more]
A0A251NUI3	1.2e-24	66.25	RING-type domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G195100 ...	[more]

BLAST of Chy2G030070 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48724.1	3.18e-75	94.74	hypothetical protein Csa_004396 [Cucumis sativus]	[more]
KAA0036326.1	2.75e-71	93.86	E3 ubiquitin-protein ligase ATL31-like [Cucumis melo var. makuwa] >TYK12720.1 E3...	[more]
CAB4314233.1	3.22e-30	66.25	unnamed protein product [Prunus armeniaca]	[more]
XP_007206808.2	4.66e-30	66.25	RING-H2 finger protein ATL32 [Prunus persica] >ONI02390.1 hypothetical protein P...	[more]
XP_008235322.1	4.66e-30	66.25	PREDICTED: E3 ubiquitin-protein ligase ATL31-like [Prunus mume]	[more]

BLAST of Chy2G030070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05200.1	2.0e-22	57.69	RING/U-box superfamily protein	[more]
AT1G22500.1	4.3e-22	55.81	RING/U-box superfamily protein	[more]
AT1G72200.1	1.3e-21	57.14	RING/U-box superfamily protein	[more]
AT4G40070.1	2.2e-21	53.75	RING/U-box superfamily protein	[more]
AT5G27420.1	2.2e-21	56.41	carbon/nitrogen insensitive 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 88..129 e-value: 1.2E-5 score: 34.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 87..130 e-value: 4.0E-12 score: 46.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 88..130 score: 12.297489
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 66..138 e-value: 6.1E-19 score: 69.0
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 57..141
None	No IPR available	PANTHER	PTHR14155:SF576	E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE	coord: 57..141
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 87..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G030070.1	Chy2G030070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane