Chy2G029640 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTGCAGAGGATGGAGCAAGAGAGATCTGGCAGGAGAGAAGATTCCGTCAAACCTCCAAAAGCTTCCCATCACGCCGGCGGCGGAATTGCCGGCAAATCCAGTAAAAAAGTCCATCCGGGTACCCTATTTGGGCTTCCGGCCATCTCTAATTCCTGA ATGTCCTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTGCAGAGGATGGAGCAAGAGAGATCTGGCAGGAGAGAAGATTCCGTCAAACCTCCAAAAGCTTCCCATCACGCCGGCGGCGGAATTGCCGGCAAATCCAGTAAAAAAGTCCATCCGGGTACCCTATTTGGGCTTCCGGCCATCTCTAATTCCTGA ATGTCCTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTGCAGAGGATGGAGCAAGAGAGATCTGGCAGGAGAGAAGATTCCGTCAAACCTCCAAAAGCTTCCCATCACGCCGGCGGCGGAATTGCCGGCAAATCCAGTAAAAAAGTCCATCCGGGTACCCTATTTGGGCTTCCGGCCATCTCTAATTCCTGA MSSMGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKASHHAGGGIAGKSSKKVHPGTLFGLPAISNS* Homology
BLAST of Chy2G029640 vs. ExPASy TrEMBL
Match: A0A0A0KGB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500720 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27 Identity = 68/72 (94.44%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of Chy2G029640 vs. ExPASy TrEMBL
Match: A0A5A7T065 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002550 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.0e-25 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Chy2G029640 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.0e-05 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 0
BLAST of Chy2G029640 vs. ExPASy TrEMBL
Match: A0A7J6E0F2 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020454 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.5e-05 Identity = 34/64 (53.12%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Chy2G029640 vs. ExPASy TrEMBL
Match: A0A7J6I0D6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_023334 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.5e-05 Identity = 34/64 (53.12%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Chy2G029640 vs. NCBI nr
Match: KGN48780.1 (hypothetical protein Csa_002943 [Cucumis sativus]) HSP 1 Score: 131 bits (329), Expect = 4.16e-38 Identity = 68/72 (94.44%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of Chy2G029640 vs. NCBI nr
Match: KAA0036273.1 (hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa] >TYK12667.1 hypothetical protein E5676_scaffold255G002550 [Cucumis melo var. makuwa]) HSP 1 Score: 124 bits (312), Expect = 1.73e-35 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Chy2G029640 vs. NCBI nr
Match: KAG6604014.1 (hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107 bits (268), Expect = 8.69e-29 Identity = 56/73 (76.71%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Chy2G029640 vs. NCBI nr
Match: KAG6594855.1 (hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 96.7 bits (239), Expect = 2.18e-24 Identity = 51/72 (70.83%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of Chy2G029640 vs. NCBI nr
Match: KAF4400541.1 (hypothetical protein G4B88_023334 [Cannabis sativa]) HSP 1 Score: 56.6 bits (135), Expect = 1.74e-08 Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|